MS016272 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCATTCGACGGTGCCGCTACCTTATCCGGCAATCTCAGGCGTAGACACGGCGACGACGGAGGAAAGATGGCGAAGAAGGAGTGCGGCAGCGGCGGCGGCCGTGGCTACTGCTACCAAGGGATCGGGAAGGCGTCGTGTATGAGATGGACGGCGGAGGATGTGGTGCACGTGGCGAGGTACCATTGGATACCCTGCGTATTCGCCATGGGTTTGCTGTTTTTTATGGGCGTGGAGTACACGCTCCGGATGGTTCCGCCGGCTTCTCCACCGTTCGATTTGGGGTTTGTGATGACGCGCCCGCTCCATCGCGTGCTCTCCTCCTGGCCCCAGCTCAACACGCTGCTGGCCGCTCTCAATACGGTAACTTCTTCCCAACTTTACTCCTCCAATGAATACTCTCAGCGTAGGTTTATTGTTTATCTGAATTCATTTTTTTAATTATTTCTGGAACTTGACAGTTTTTTTTTTTTCCCTCACGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATAAACAACCACACAATTTTTTCTTTTTGAAATTTAGTAACCACACGAAATTAAAAGGTAAGAATCCTAGGCGTAAAATTTATTAAATAAAAAATTGAAACGAGGACCATCAAATTCTTTTGTAATAAGTTTTTGAATTTTAAAAGATATTTGAATAAATTTCTAAATTTTCAATTTCATGTCTGACATGTTTAATAAGTTTTCTAAATTTTCAATCAGTCTATATTGGACACAAATTTGTGAGAGATGAAGTTTAAAGTGATTTAATAGATATAAAATTGGAAGTTCAGTTATTTGATTTTCTATTTTTGAAAATTAAATTTGTAAACACTCCTTTATCCATGTATTTGTTGTTTTGCCTTTGCTTTTAGAAACTATTTTCAAAATCTAATCCAAATTTTGAGAATTAAAAAAAATAGTAGTTTTCAGAAATTTGACCAAGAGTTTAAATGGATTTTTTTAAAAGGTGAAAACAAACCAGCATAATCTTTGAAAAAAAAATGGTTACTAAATTAGTCCTTATGAATTTGTTAGACACTTTTAAAATTGTGCAACTTGTTAGATACAAAACTAAAAGTTTAAGAATTTATTAGAGGATGAAAAACTTATTGCACCAAATTTATAAGTTTAGAAATTAAAGTTAATTTAACCTGCTAAAATACTTTTTTTAATCGATTTTCGAATAAGCTTTTAATTTTAGTTGCAAACATTTGTAGGCTTTTTTGTTTGGATCCTTTTACTATTATAAATTTCATTAAGCTCCACAATTCATCCCTAATTATAAAAATGATGATGTCTATATATATAACATATAGGGATAATAAATGATGATACTTCGCATTTATTATATTTTCTTAAAAGAAGTAATTTATTAAATGAGGTCTTTAAATTAGACTTACAACTCTTATAAATGAAAATTAATTATTTGGGTAAAATTTTTTATTTTGACATTTGTGCCCTTGAAATATTGAATAAATCACGGCATATGAAGCCGTTTTATCAATTATTATGATTTTTTTAGTGAGAATGAGAATATGTATATAGAAGTTCATCGGTCTTGATTTATCACTATGCAATTTTAATTATTTTTTGGGGAGAAATTCTCAATTTAATTTTCTCTAATATGTATGACCTTTTATTATTATTATTATTTGCTTTTGGACTTAACCTTTTGAAATTGGAAAAGGTTTATTTAAAAATTTTCAAAATTTTTCTTAAATTCTATCACATTATTCAAACATTGTCGTCTTAATTCAAAAATGCTATTTTTAACATAATAAAAAGTTTACAGAGTGTTTTTAATTGATCAAAAGTATTTTTTTTATACGTGTCAAAAAAAATAATTAGTATATCCAACACCAGGCCAGAGGGAGTTTAACTCAGTGGTAATCGACATATACCTCCAACCAAGAGGTTGTGAGTTCGATCTTCTACCCTCATATGTTGTACTAAAATAAAGTATATATATACAAAACCAGGAAATAAATTTGTACTTTTATTTTTTATTGGCTAGGAATTAGTTATATGACAAAGGGAATTTGTTAAAAAAAAAAAAAGTTTCTTTTCTTTAGTTATTGTTGGCCTTTTATTTCGATTTTGAAAAATAAAAACTGTTTTGTTTCTTGAATTTTCAGCTATAGTTTCATTTGTTCCATATATTTCAAAATTGTGCATTTTTGTTCTTGAATTTTCAAAAATAGGTTTAAATAACCTCTCCACCAACTGACCTGATTAGATTGATGTGACAAATATGAGTTACAAGACCGTGACTATCGTGTAATACGATCGGATGGATAAAATTGTGATCTTACAATAGCATCATGATGTTTTTCCATTCGATCGAGTTACACTAAGATCTTTTATTCGGATAATATCAAGATAGGATTTAAGATCCTGGTTAATCTTACAATTGGTTATGCATTGACCATAGTAATGTTATTGCCTTGTGAACACTGTGATTTTGATTTATAGTATAACCGAAATAGGGTATATCATGGTGTTCATTCTCATGTTGCATTATGTGATGAACACTGCGATATAAAACCTTGTCGTAGTAATGGCTACTCAAGAACACCACCCATCCAAAATCACGAAAACAACCTATTTCTACATCTTTGTTCAGTTACATGAATCTATTCAGGTTCAGAATCTATCGAAAATAACATATCTACCATTTAAACTTATTTCTGAAAATTCAAGAGCAAAAATGCACCATTTTGAAATGTAGGCAAACCAATGAACCAAAAAATGAGCGACCAAAAGAGAATCCGCCAGATGGAGCATGCTCAATAGTTAACATATTACATGTAGTTTGGAATGTTGAGTGTTGTTTGAATGGTAATAAAAGAAGTGAAAAATTGTAGGTATTCGTGGGAATGCAAACGAGCTACATATTATGGGCATGGCTCATCGAAGGGAGACCACGGGCCACCATCTCCGCCTTGTTCATGTTCACTTGCCGTGGCATTCTTGGCTATTCCACTCAACTTCCACTCCCTCAGGTGCAGCCCTTTCACCTTCTACTTGTTGGCATGATTTGAGTTTTCTGAATGAGCTAGCTCCTATGACCTTTTTAGGGTTTTTTGGGATCGGAGATGGACTTTCCGGTCGGTAACGTATCCTTCTTCTTATTCTTCTCCGGGCACGTGGCCGGATCGGTGATAGCATCGTTGGACATGCGGCGGATGCAGCGGTGGGGGCTCGCCTGGACATTCGACTTCCTCAACCTCCTCCAAGCTATTAGGTTGTTGGGTACCAGAGGTCACTACACCATTGACTTGGCCGTCGGCGTTGGTGCCGGAATTCTTTTCGATTCCCTTGCCGGACACTATGAAGCCACACAGAACTCCAAGAACCTTCATACTCAGTTACCTAAAACTTTTGCT ATGGCATTCGACGGTGCCGCTACCTTATCCGGCAATCTCAGGCGTAGACACGGCGACGACGGAGGAAAGATGGCGAAGAAGGAGTGCGGCAGCGGCGGCGGCCGTGGCTACTGCTACCAAGGGATCGGGAAGGCGTCGTGTATGAGATGGACGGCGGAGGATGTGGTGCACGTGGCGAGGTACCATTGGATACCCTGCGTATTCGCCATGGGTTTGCTGTTTTTTATGGGCGTGGAGTACACGCTCCGGATGGTTCCGCCGGCTTCTCCACCGTTCGATTTGGGGTTTGTGATGACGCGCCCGCTCCATCGCGTGCTCTCCTCCTGGCCCCAGCTCAACACGCTGCTGGCCGCTCTCAATACGGTATTCGTGGGAATGCAAACGAGCTACATATTATGGGCATGGCTCATCGAAGGGAGACCACGGGCCACCATCTCCGCCTTGTTCATGTTCACTTGCCGTGGCATTCTTGGCTATTCCACTCAACTTCCACTCCCTCAGGGTTTTTTGGGATCGGAGATGGACTTTCCGGTCGGTAACGTATCCTTCTTCTTATTCTTCTCCGGGCACGTGGCCGGATCGGTGATAGCATCGTTGGACATGCGGCGGATGCAGCGGTGGGGGCTCGCCTGGACATTCGACTTCCTCAACCTCCTCCAAGCTATTAGGTTGTTGGGTACCAGAGGTCACTACACCATTGACTTGGCCGTCGGCGTTGGTGCCGGAATTCTTTTCGATTCCCTTGCCGGACACTATGAAGCCACACAGAACTCCAAGAACCTTCATACTCAGTTACCTAAAACTTTTGCT ATGGCATTCGACGGTGCCGCTACCTTATCCGGCAATCTCAGGCGTAGACACGGCGACGACGGAGGAAAGATGGCGAAGAAGGAGTGCGGCAGCGGCGGCGGCCGTGGCTACTGCTACCAAGGGATCGGGAAGGCGTCGTGTATGAGATGGACGGCGGAGGATGTGGTGCACGTGGCGAGGTACCATTGGATACCCTGCGTATTCGCCATGGGTTTGCTGTTTTTTATGGGCGTGGAGTACACGCTCCGGATGGTTCCGCCGGCTTCTCCACCGTTCGATTTGGGGTTTGTGATGACGCGCCCGCTCCATCGCGTGCTCTCCTCCTGGCCCCAGCTCAACACGCTGCTGGCCGCTCTCAATACGGTATTCGTGGGAATGCAAACGAGCTACATATTATGGGCATGGCTCATCGAAGGGAGACCACGGGCCACCATCTCCGCCTTGTTCATGTTCACTTGCCGTGGCATTCTTGGCTATTCCACTCAACTTCCACTCCCTCAGGGTTTTTTGGGATCGGAGATGGACTTTCCGGTCGGTAACGTATCCTTCTTCTTATTCTTCTCCGGGCACGTGGCCGGATCGGTGATAGCATCGTTGGACATGCGGCGGATGCAGCGGTGGGGGCTCGCCTGGACATTCGACTTCCTCAACCTCCTCCAAGCTATTAGGTTGTTGGGTACCAGAGGTCACTACACCATTGACTTGGCCGTCGGCGTTGGTGCCGGAATTCTTTTCGATTCCCTTGCCGGACACTATGAAGCCACACAGAACTCCAAGAACCTTCATACTCAGTTACCTAAAACTTTTGCT MAFDGAATLSGNLRRRHGDDGGKMAKKECGSGGGRGYCYQGIGKASCMRWTAEDVVHVARYHWIPCVFAMGLLFFMGVEYTLRMVPPASPPFDLGFVMTRPLHRVLSSWPQLNTLLAALNTVFVGMQTSYILWAWLIEGRPRATISALFMFTCRGILGYSTQLPLPQGFLGSEMDFPVGNVSFFLFFSGHVAGSVIASLDMRRMQRWGLAWTFDFLNLLQAIRLLGTRGHYTIDLAVGVGAGILFDSLAGHYEATQNSKNLHTQLPKTFA Homology
BLAST of MS016272 vs. NCBI nr
Match: XP_022153394.1 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Momordica charantia]) HSP 1 Score: 556.2 bits (1432), Expect = 1.5e-154 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0
BLAST of MS016272 vs. NCBI nr
Match: XP_022998356.1 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Cucurbita maxima]) HSP 1 Score: 463.4 bits (1191), Expect = 1.4e-126 Identity = 231/284 (81.34%), Postives = 247/284 (86.97%), Query Frame = 0
BLAST of MS016272 vs. NCBI nr
Match: KAG6606806.1 (Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 463.4 bits (1191), Expect = 1.4e-126 Identity = 232/284 (81.69%), Postives = 246/284 (86.62%), Query Frame = 0
BLAST of MS016272 vs. NCBI nr
Match: XP_023525875.1 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 463.4 bits (1191), Expect = 1.4e-126 Identity = 232/284 (81.69%), Postives = 248/284 (87.32%), Query Frame = 0
BLAST of MS016272 vs. NCBI nr
Match: XP_022949495.1 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like [Cucurbita moschata]) HSP 1 Score: 462.2 bits (1188), Expect = 3.0e-126 Identity = 231/284 (81.34%), Postives = 246/284 (86.62%), Query Frame = 0
BLAST of MS016272 vs. ExPASy Swiss-Prot
Match: Q9LVZ7 (Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1 OS=Arabidopsis thaliana OX=3702 GN=ROD1 PE=1 SV=1) HSP 1 Score: 357.1 bits (915), Expect = 1.8e-97 Identity = 188/269 (69.89%), Postives = 211/269 (78.44%), Query Frame = 0
BLAST of MS016272 vs. ExPASy Swiss-Prot
Match: Q9LVZ6 (Phosphatidylcholine:diacylglycerol cholinephosphotransferase 2 OS=Arabidopsis thaliana OX=3702 GN=At3g15830 PE=2 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.2e-88 Identity = 161/230 (70.00%), Postives = 189/230 (82.17%), Query Frame = 0
BLAST of MS016272 vs. ExPASy TrEMBL
Match: A0A6J1DIX7 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like OS=Momordica charantia OX=3673 GN=LOC111020904 PE=4 SV=1) HSP 1 Score: 556.2 bits (1432), Expect = 7.4e-155 Identity = 269/270 (99.63%), Postives = 269/270 (99.63%), Query Frame = 0
BLAST of MS016272 vs. ExPASy TrEMBL
Match: A0A6J1KA13 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111493022 PE=4 SV=1) HSP 1 Score: 463.4 bits (1191), Expect = 6.6e-127 Identity = 231/284 (81.34%), Postives = 247/284 (86.97%), Query Frame = 0
BLAST of MS016272 vs. ExPASy TrEMBL
Match: A0A6J1GCX5 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like OS=Cucurbita moschata OX=3662 GN=LOC111452823 PE=4 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.5e-126 Identity = 231/284 (81.34%), Postives = 246/284 (86.62%), Query Frame = 0
BLAST of MS016272 vs. ExPASy TrEMBL
Match: A0A5A7TSW2 (Phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold655G001880 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.5e-115 Identity = 215/282 (76.24%), Postives = 235/282 (83.33%), Query Frame = 0
BLAST of MS016272 vs. ExPASy TrEMBL
Match: A0A1S3BY33 (phosphatidylcholine:diacylglycerol cholinephosphotransferase 1-like OS=Cucumis melo OX=3656 GN=LOC103494688 PE=4 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.5e-115 Identity = 215/282 (76.24%), Postives = 235/282 (83.33%), Query Frame = 0
BLAST of MS016272 vs. TAIR 10
Match: AT3G15820.1 (phosphatidic acid phosphatase-related / PAP2-related ) HSP 1 Score: 357.1 bits (915), Expect = 1.3e-98 Identity = 188/269 (69.89%), Postives = 211/269 (78.44%), Query Frame = 0
BLAST of MS016272 vs. TAIR 10
Match: AT3G15830.1 (phosphatidic acid phosphatase-related / PAP2-related ) HSP 1 Score: 327.8 bits (839), Expect = 8.3e-90 Identity = 161/230 (70.00%), Postives = 189/230 (82.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|