MS016197 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGCAGGTGCTTTCACACCCTTTTACCATTTCTAAAATCCAAATGAAGAAGATACAGAGCCATTATTTAGCTGAATGGTTTATAAATTTTGCAGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCACAAACTTCTTGGGAACAGGTCACATTTTTACCCATTTTGGTCTGCAGCTTTCTCGATTGTTTGCCTTCTGCTTCATAATCTGAACAGGAGTTTTGGTTTGGTTTTTTGAGTTGGGGTGGTGCATTGATCTTTTCAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAACCAACAGAGTGAA ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGCAGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCACAAACTTCTTGGGAACAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAACCAACAGAGTGAA ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGCAGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCACAAACTTCTTGGGAACAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAACCAACAGAGTGAA MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE Homology
BLAST of MS016197 vs. NCBI nr
Match: XP_022153490.1 (transcription factor MYB114-like [Momordica charantia]) HSP 1 Score: 239.6 bits (610), Expect = 1.3e-59 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of MS016197 vs. NCBI nr
Match: XP_022948466.1 (transcription factor MYB114-like [Cucurbita moschata] >XP_023525819.1 transcription factor MYB114-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 235.0 bits (598), Expect = 3.3e-58 Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of MS016197 vs. NCBI nr
Match: KAG6606693.1 (Transcription factor MYB4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 235.0 bits (598), Expect = 3.3e-58 Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of MS016197 vs. NCBI nr
Match: XP_038878481.1 (transcription factor MYB3-like [Benincasa hispida]) HSP 1 Score: 232.3 bits (591), Expect = 2.1e-57 Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of MS016197 vs. NCBI nr
Match: XP_022998619.1 (transcription factor MYB114-like [Cucurbita maxima]) HSP 1 Score: 231.9 bits (590), Expect = 2.8e-57 Identity = 110/114 (96.49%), Postives = 112/114 (98.25%), Query Frame = 0
BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6QCQ2 (Transcription factor MYB3 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB3 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.4e-45 Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6Q5I0 (Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 SV=1) HSP 1 Score: 181.0 bits (458), Expect = 7.4e-45 Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6Q4S0 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 SV=1) HSP 1 Score: 179.1 bits (453), Expect = 2.8e-44 Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 0
BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6Q411 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 2.0e-42 Identity = 75/112 (66.96%), Postives = 93/112 (83.04%), Query Frame = 0
BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A2R6PN00 (Transcription factor MYB123 OS=Actinidia chinensis var. chinensis OX=1590841 GN=MYB123 PE=1 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 2.6e-42 Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 0
BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1DGZ8 (transcription factor MYB114-like OS=Momordica charantia OX=3673 GN=LOC111020984 PE=4 SV=1) HSP 1 Score: 239.6 bits (610), Expect = 6.5e-60 Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0
BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1G9A5 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111452140 PE=4 SV=1) HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58 Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0
BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1KET2 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111493205 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57 Identity = 110/114 (96.49%), Postives = 112/114 (98.25%), Query Frame = 0
BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A5D3C7H7 (Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001380 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 5.1e-57 Identity = 110/115 (95.65%), Postives = 114/115 (99.13%), Query Frame = 0
BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1GUA9 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111457538 PE=4 SV=1) HSP 1 Score: 229.9 bits (585), Expect = 5.1e-57 Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0
BLAST of MS016197 vs. TAIR 10
Match: AT5G14750.1 (myb domain protein 66 ) HSP 1 Score: 169.5 bits (428), Expect = 1.6e-42 Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 0
BLAST of MS016197 vs. TAIR 10
Match: AT5G40330.1 (myb domain protein 23 ) HSP 1 Score: 167.5 bits (423), Expect = 6.0e-42 Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 0
BLAST of MS016197 vs. TAIR 10
Match: AT3G13540.1 (myb domain protein 5 ) HSP 1 Score: 166.4 bits (420), Expect = 1.3e-41 Identity = 73/109 (66.97%), Postives = 89/109 (81.65%), Query Frame = 0
BLAST of MS016197 vs. TAIR 10
Match: AT1G22640.1 (myb domain protein 3 ) HSP 1 Score: 165.6 bits (418), Expect = 2.3e-41 Identity = 69/105 (65.71%), Postives = 89/105 (84.76%), Query Frame = 0
BLAST of MS016197 vs. TAIR 10
Match: AT5G35550.1 (Duplicated homeodomain-like superfamily protein ) HSP 1 Score: 165.6 bits (418), Expect = 2.3e-41 Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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