MS016197 (gene) Bitter gourd (TR) v1

Overview
NameMS016197
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMYB transcription factor 2
Locationscaffold9_2: 1023829 .. 1024376 (+)
RNA-Seq ExpressionMS016197
SyntenyMS016197
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGCAGGTGCTTTCACACCCTTTTACCATTTCTAAAATCCAAATGAAGAAGATACAGAGCCATTATTTAGCTGAATGGTTTATAAATTTTGCAGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCACAAACTTCTTGGGAACAGGTCACATTTTTACCCATTTTGGTCTGCAGCTTTCTCGATTGTTTGCCTTCTGCTTCATAATCTGAACAGGAGTTTTGGTTTGGTTTTTTGAGTTGGGGTGGTGCATTGATCTTTTCAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAACCAACAGAGTGAA

mRNA sequence

ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGCAGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCACAAACTTCTTGGGAACAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAACCAACAGAGTGAA

Coding sequence (CDS)

ATGAGAAATGGAGTCAATAAAGGTGCTTGGACCGCAGAAGAAGACCAAAAACTGGCCGAGGTTATTGCCATTCATGGTGCAAAAAGGTGGAAAACGATTGCAGCCAAAGCAGGTCTCAATCGCTGTGGGAAGAGTTGCAGACTAAGATGGCTGAATTATCTGAGACCTAACATAAAGAGAGGCAATATATCAGATCAAGAAGAAGATTTGATCCTCAGGCTCCACAAACTTCTTGGGAACAGGTGGTCCTTGATTGCTGGGAGATTGCCCGGCCGAACAGATAACGAGATAAAGAACTATTGGAATTCTCATTTGAGCAAGAAAATAAACCAACAGAGTGAA

Protein sequence

MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE
Homology
BLAST of MS016197 vs. NCBI nr
Match: XP_022153490.1 (transcription factor MYB114-like [Momordica charantia])

HSP 1 Score: 239.6 bits (610), Expect = 1.3e-59
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0

Query: 1   MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 60
           MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR
Sbjct: 24  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 83

Query: 61  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE
Sbjct: 84  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 137

BLAST of MS016197 vs. NCBI nr
Match: XP_022948466.1 (transcription factor MYB114-like [Cucurbita moschata] >XP_023525819.1 transcription factor MYB114-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 235.0 bits (598), Expect = 3.3e-58
Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0

Query: 1   MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 60
           +RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR
Sbjct: 24  VRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 83

Query: 61  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQ SE
Sbjct: 84  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQHSE 137

BLAST of MS016197 vs. NCBI nr
Match: KAG6606693.1 (Transcription factor MYB4, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 235.0 bits (598), Expect = 3.3e-58
Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0

Query: 1   MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 60
           +RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR
Sbjct: 24  VRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 83

Query: 61  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQ SE
Sbjct: 84  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQHSE 137

BLAST of MS016197 vs. NCBI nr
Match: XP_038878481.1 (transcription factor MYB3-like [Benincasa hispida])

HSP 1 Score: 232.3 bits (591), Expect = 2.1e-57
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0

Query: 1   MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIK 60
           MRN GVNKGAWTAEEDQKLAEVIAIHGAKRWK+IAAKAGLNRCGKSCRLRWLNYLRPNIK
Sbjct: 24  MRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIK 83

Query: 61  RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQQSE
Sbjct: 84  RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSE 138

BLAST of MS016197 vs. NCBI nr
Match: XP_022998619.1 (transcription factor MYB114-like [Cucurbita maxima])

HSP 1 Score: 231.9 bits (590), Expect = 2.8e-57
Identity = 110/114 (96.49%), Postives = 112/114 (98.25%), Query Frame = 0

Query: 1   MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 60
           +RN VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR
Sbjct: 24  VRNRVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 83

Query: 61  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQ SE
Sbjct: 84  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQHSE 137

BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6QCQ2 (Transcription factor MYB3 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB3 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.4e-45
Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 0

Query: 5   VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNIS 64
           VN+G WTAEED+KL   ++ HG K+W+ + AKAGL RCGKSCRLRWLNYLRP IKRGNIS
Sbjct: 15  VNRGTWTAEEDEKLMNYVSAHGDKKWRMLPAKAGLKRCGKSCRLRWLNYLRPGIKRGNIS 74

Query: 65  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK 109
           + EEDLI+RLH LLGNRWS+IAGR+PGRTDNEIKN+WN+HLSK+
Sbjct: 75  EDEEDLIIRLHNLLGNRWSIIAGRIPGRTDNEIKNHWNTHLSKR 118

BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6Q5I0 (Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 7.4e-45
Identity = 78/104 (75.00%), Postives = 92/104 (88.46%), Query Frame = 0

Query: 5   VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNIS 64
           VN+G WTAEED+KL   ++ HG K+W+ + AKAGL RCGKSCRLRWLNYLRP IKRGNIS
Sbjct: 15  VNRGTWTAEEDEKLMNYVSAHGDKKWRMLPAKAGLKRCGKSCRLRWLNYLRPGIKRGNIS 74

Query: 65  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK 109
           + EEDLI+RLH LLGNRWS+IAGR+PGRTDNEIKN+WN+HLSK+
Sbjct: 75  EDEEDLIIRLHNLLGNRWSIIAGRIPGRTDNEIKNHWNTHLSKR 118

BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6Q4S0 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.8e-44
Identity = 79/112 (70.54%), Postives = 96/112 (85.71%), Query Frame = 0

Query: 2   RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRG 61
           + G+N+GAW+A ED+ L + I  HG  +W+ +  +AGL RCGKSCRLRWLNYLRP+IKRG
Sbjct: 9   KEGLNRGAWSAREDKVLKDYINTHGEGKWRDLPRRAGLKRCGKSCRLRWLNYLRPDIKRG 68

Query: 62  NISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQS 114
           NIS  EE+LI+RLHKLLGNRWSLIAGRLPGRTDNEIKNYWN++LSKK+N Q+
Sbjct: 69  NISYDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTYLSKKVNSQT 120

BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A4D6Q411 (Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 SV=1)

HSP 1 Score: 172.9 bits (437), Expect = 2.0e-42
Identity = 75/112 (66.96%), Postives = 93/112 (83.04%), Query Frame = 0

Query: 2   RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRG 61
           + G+N+GAW + ED+ L   I  HG  +W+++  +AGL RCGKSCRLRWLNYLRP IKRG
Sbjct: 9   KEGMNRGAWASMEDKILVTYIKTHGEGKWRSLPKRAGLKRCGKSCRLRWLNYLRPGIKRG 68

Query: 62  NISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQS 114
           NIS+ EEDLI+RLH LLGNRWSLIAGRLPGRTDNEIKNYWN++L ++++ QS
Sbjct: 69  NISEDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGRRVHDQS 120

BLAST of MS016197 vs. ExPASy Swiss-Prot
Match: A0A2R6PN00 (Transcription factor MYB123 OS=Actinidia chinensis var. chinensis OX=1590841 GN=MYB123 PE=1 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 2.6e-42
Identity = 78/112 (69.64%), Postives = 92/112 (82.14%), Query Frame = 0

Query: 2   RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRG 61
           + G+ +GAWTA ED+ L   I  HG  +W+ +  +AGL RCGKSCRLRWLNYLRP+IKRG
Sbjct: 9   KEGLIRGAWTAVEDRTLTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRG 68

Query: 62  NISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQS 114
           NIS +EE+LI+RLHKLLGNRWSLIAGRLPGRTDNEIKNYWN+ L KKI  Q+
Sbjct: 69  NISHEEEELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKIRPQT 120

BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1DGZ8 (transcription factor MYB114-like OS=Momordica charantia OX=3673 GN=LOC111020984 PE=4 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 6.5e-60
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0

Query: 1   MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 60
           MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR
Sbjct: 24  MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 83

Query: 61  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE
Sbjct: 84  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 137

BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1G9A5 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111452140 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 1.6e-58
Identity = 111/114 (97.37%), Postives = 113/114 (99.12%), Query Frame = 0

Query: 1   MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 60
           +RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR
Sbjct: 24  VRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 83

Query: 61  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQ SE
Sbjct: 84  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQHSE 137

BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1KET2 (transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111493205 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.4e-57
Identity = 110/114 (96.49%), Postives = 112/114 (98.25%), Query Frame = 0

Query: 1   MRNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 60
           +RN VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR
Sbjct: 24  VRNRVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKR 83

Query: 61  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQ SE
Sbjct: 84  GNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQHSE 137

BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A5D3C7H7 (Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold606G001380 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.1e-57
Identity = 110/115 (95.65%), Postives = 114/115 (99.13%), Query Frame = 0

Query: 1   MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIK 60
           +RN GVNKGAWTAEEDQKLA+VIAIHGAKRWK+IAAKAGLNRCGKSCRLRWLNYLRPNIK
Sbjct: 27  LRNGGVNKGAWTAEEDQKLAQVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIK 86

Query: 61  RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+NQQSE
Sbjct: 87  RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKMNQQSE 141

BLAST of MS016197 vs. ExPASy TrEMBL
Match: A0A6J1GUA9 (transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111457538 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 5.1e-57
Identity = 111/115 (96.52%), Postives = 113/115 (98.26%), Query Frame = 0

Query: 1   MRN-GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIK 60
           MRN GVNKGAWTAEEDQKLAEVIAIHGAKRWK+IAAKAGLNRCGKSCRLRWLNYLRPNIK
Sbjct: 24  MRNGGVNKGAWTAEEDQKLAEVIAIHGAKRWKSIAAKAGLNRCGKSCRLRWLNYLRPNIK 83

Query: 61  RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQSE 115
           RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKK+N QSE
Sbjct: 84  RGNISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKLNLQSE 138

BLAST of MS016197 vs. TAIR 10
Match: AT5G14750.1 (myb domain protein 66 )

HSP 1 Score: 169.5 bits (428), Expect = 1.6e-42
Identity = 73/107 (68.22%), Postives = 86/107 (80.37%), Query Frame = 0

Query: 3   NGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGN 62
           N   KG WT EED+ L + +  HG   W  IA K GL RCGKSCRLRW+NYL PN+KRGN
Sbjct: 14  NEYKKGLWTVEEDKILMDYVKAHGKGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVKRGN 73

Query: 63  ISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKI 110
            ++QEEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN+HLSKK+
Sbjct: 74  FTEQEEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 120

BLAST of MS016197 vs. TAIR 10
Match: AT5G40330.1 (myb domain protein 23 )

HSP 1 Score: 167.5 bits (423), Expect = 6.0e-42
Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 0

Query: 7   KGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNISDQ 66
           KG WT EED+ L + +  HG   W  IA K GL RCGKSCRLRW+NYL PN+ RGN +DQ
Sbjct: 14  KGLWTVEEDKILMDYVRTHGQGHWNRIAKKTGLKRCGKSCRLRWMNYLSPNVNRGNFTDQ 73

Query: 67  EEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKI 110
           EEDLI+RLHKLLGNRWSLIA R+PGRTDN++KNYWN+HLSKK+
Sbjct: 74  EEDLIIRLHKLLGNRWSLIAKRVPGRTDNQVKNYWNTHLSKKL 116

BLAST of MS016197 vs. TAIR 10
Match: AT3G13540.1 (myb domain protein 5 )

HSP 1 Score: 166.4 bits (420), Expect = 1.3e-41
Identity = 73/109 (66.97%), Postives = 89/109 (81.65%), Query Frame = 0

Query: 4   GVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNI 63
           G+ +G WT EED+ L   I   G  RW+++  +AGL RCGKSCRLRW+NYLRP++KRG I
Sbjct: 22  GMKRGPWTVEEDEILVSFIKKEGEGRWRSLPKRAGLLRCGKSCRLRWMNYLRPSVKRGGI 81

Query: 64  SDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKINQQ 113
           +  EEDLILRLH+LLGNRWSLIAGR+PGRTDNEIKNYWN+HL KK+ +Q
Sbjct: 82  TSDEEDLILRLHRLLGNRWSLIAGRIPGRTDNEIKNYWNTHLRKKLLRQ 130

BLAST of MS016197 vs. TAIR 10
Match: AT1G22640.1 (myb domain protein 3 )

HSP 1 Score: 165.6 bits (418), Expect = 2.3e-41
Identity = 69/105 (65.71%), Postives = 89/105 (84.76%), Query Frame = 0

Query: 5   VNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRGNIS 64
           +NKGAWT EEDQ L + I  HG   W+++   AGL RCGKSCRLRW+NYLRP++KRGN +
Sbjct: 12  MNKGAWTKEEDQLLVDYIRKHGEGCWRSLPRAAGLQRCGKSCRLRWMNYLRPDLKRGNFT 71

Query: 65  DQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKI 110
           ++E++LI++LH LLGN+WSLIAGRLPGRTDNEIKNYWN+H+ +K+
Sbjct: 72  EEEDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIKRKL 116

BLAST of MS016197 vs. TAIR 10
Match: AT5G35550.1 (Duplicated homeodomain-like superfamily protein )

HSP 1 Score: 165.6 bits (418), Expect = 2.3e-41
Identity = 74/108 (68.52%), Postives = 87/108 (80.56%), Query Frame = 0

Query: 2   RNGVNKGAWTAEEDQKLAEVIAIHGAKRWKTIAAKAGLNRCGKSCRLRWLNYLRPNIKRG 61
           R  +N+GAWT  ED+ L + I  HG  +W T+  +AGL RCGKSCRLRW NYLRP IKRG
Sbjct: 11  REELNRGAWTDHEDKILRDYITTHGEGKWSTLPNQAGLKRCGKSCRLRWKNYLRPGIKRG 70

Query: 62  NISDQEEDLILRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNSHLSKKI 110
           NIS  EE+LI+RLH LLGNRWSLIAGRLPGRTDNEIKN+WNS+L K++
Sbjct: 71  NISSDEEELIIRLHNLLGNRWSLIAGRLPGRTDNEIKNHWNSNLRKRL 118

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022153490.11.3e-59100.00transcription factor MYB114-like [Momordica charantia][more]
XP_022948466.13.3e-5897.37transcription factor MYB114-like [Cucurbita moschata] >XP_023525819.1 transcript... [more]
KAG6606693.13.3e-5897.37Transcription factor MYB4, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_038878481.12.1e-5797.39transcription factor MYB3-like [Benincasa hispida][more]
XP_022998619.12.8e-5796.49transcription factor MYB114-like [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
A0A4D6QCQ27.4e-4575.00Transcription factor MYB3 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB3 PE=2 ... [more]
A0A4D6Q5I07.4e-4575.00Transcription factor MYB4 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB4 PE=2 ... [more]
A0A4D6Q4S02.8e-4470.54Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB2 PE=2 ... [more]
A0A4D6Q4112.0e-4266.96Transcription factor MYB1 OS=Crocosmia x crocosmiiflora OX=1053288 GN=MYB1 PE=2 ... [more]
A0A2R6PN002.6e-4269.64Transcription factor MYB123 OS=Actinidia chinensis var. chinensis OX=1590841 GN=... [more]
Match NameE-valueIdentityDescription
A0A6J1DGZ86.5e-60100.00transcription factor MYB114-like OS=Momordica charantia OX=3673 GN=LOC111020984 ... [more]
A0A6J1G9A51.6e-5897.37transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111452140 P... [more]
A0A6J1KET21.4e-5796.49transcription factor MYB114-like OS=Cucurbita maxima OX=3661 GN=LOC111493205 PE=... [more]
A0A5D3C7H75.1e-5795.65Transcription factor MYB114-like protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A6J1GUA95.1e-5796.52transcription factor MYB114-like OS=Cucurbita moschata OX=3662 GN=LOC111457538 P... [more]
Match NameE-valueIdentityDescription
AT5G14750.11.6e-4268.22myb domain protein 66 [more]
AT5G40330.16.0e-4269.90myb domain protein 23 [more]
AT3G13540.11.3e-4166.97myb domain protein 5 [more]
AT1G22640.12.3e-4165.71myb domain protein 3 [more]
AT5G35550.12.3e-4168.52Duplicated homeodomain-like superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 6..56
e-value: 6.4E-17
score: 72.2
coord: 59..107
e-value: 1.9E-15
score: 67.3
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 55..105
score: 10.313219
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 2..54
score: 11.799606
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 9..54
e-value: 2.62107E-12
score: 54.889
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 64..105
e-value: 2.08415E-10
score: 49.8814
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 7..54
e-value: 1.5E-19
score: 69.9
coord: 60..105
e-value: 3.8E-14
score: 52.6
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 2..58
score: 26.694044
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 59..109
score: 22.660028
NoneNo IPR availableGENE3D1.10.10.60coord: 7..59
e-value: 1.7E-20
score: 74.7
NoneNo IPR availableGENE3D1.10.10.60coord: 64..114
e-value: 2.5E-21
score: 77.5
NoneNo IPR availablePANTHERPTHR47998:SF18TRANSCRIPTION FACTOR MYB23-LIKEcoord: 3..112
NoneNo IPR availablePANTHERPTHR47998TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1coord: 3..112
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 5..101

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS016197.1MS016197.1mRNA