MS016170 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCTTCTCACAATACTCATTCCGAGACTGCAAAAACCGACCAAATTCTAACTGCTAAAACGCTACAAATTGTACTGGAATCGAGGTCCCCTTGTATCTCGTCGCGTAATTTCAGTGGGGAACAAGTTTTGTCGTCTCCATCTTCCTCCTGTTCGTGAATGCTCTGCAGCGTTAGAGAACATTGATCTCTGGCGTCAGAGCTACCACGAAACCATGGTGGTAGATGTTATTTTGGTTCAGACTCAGTGAATGCTTCTCCTAGAAAAGATCTTGTTAGGAACTTGTCTCTGAAAGAGAAATATTCACTCTTTCAATTGTGATAAGGACGAGTTTGGATGTGATACCAAGAGCGAGAAGATTGTAGAAAGATGGATGGTGCATTATGAAACTATAAAAAACAGGGATAGC ATGGCTTCTTCTCACAATACTCATTCCGAGACTGCAAAAACCGACCAAATTCTAACTGCTAAAACGCTACAAATTGTACTGGAATCGAGGTCCCCTTGTATCTCGTCGCGTAATTTCAGTGGGGAACAAGTTTTGTCGTCTCCATCTTCCTCCGTTCGTGAATGCTCTGCAGCGTTAGAGAACATTGATCTCTGGCGTCAGAGCTACCACGAAACCATGGTGGTAGATGTTATTTTGGTTGACTCAGTGAATGCTTCTCCTAGAAAAGATCTTGTTAGGAACTTGTCTCTGAAAGAGAAATATTCACTCTTCAATTGTGATAAGGACGAGTTTGGATGTGATACCAAGAGCGAGAAGATTGTAGAAAGATGGATGGTGCATTATGAAACTATAAAAAACAGGGATAGC ATGGCTTCTTCTCACAATACTCATTCCGAGACTGCAAAAACCGACCAAATTCTAACTGCTAAAACGCTACAAATTGTACTGGAATCGAGGTCCCCTTGTATCTCGTCGCGTAATTTCAGTGGGGAACAAGTTTTGTCGTCTCCATCTTCCTCCGTTCGTGAATGCTCTGCAGCGTTAGAGAACATTGATCTCTGGCGTCAGAGCTACCACGAAACCATGGTGGTAGATGTTATTTTGGTTGACTCAGTGAATGCTTCTCCTAGAAAAGATCTTGTTAGGAACTTGTCTCTGAAAGAGAAATATTCACTCTTCAATTGTGATAAGGACGAGTTTGGATGTGATACCAAGAGCGAGAAGATTGTAGAAAGATGGATGGTGCATTATGAAACTATAAAAAACAGGGATAGC MASSHNTHSETAKTDQILTAKTLQIVLESRSPCISSRNFSGEQVLSSPSSSVRECSAALENIDLWRQSYHETMVVDVILVDSVNASPRKDLVRNLSLKEKYSLFNCDKDEFGCDTKSEKIVERWMVHYETIKNRDS Homology
BLAST of MS016170 vs. NCBI nr
Match: XP_022132934.1 (autophagy-related protein 13b [Momordica charantia] >XP_022132935.1 autophagy-related protein 13b [Momordica charantia]) HSP 1 Score: 227.6 bits (579), Expect = 6.3e-56 Identity = 128/162 (79.01%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of MS016170 vs. NCBI nr
Match: XP_038882060.1 (autophagy-related protein 13b [Benincasa hispida]) HSP 1 Score: 212.6 bits (540), Expect = 2.1e-51 Identity = 119/163 (73.01%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS016170 vs. NCBI nr
Match: XP_008441018.1 (PREDICTED: autophagy-related protein 13b isoform X2 [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 4.0e-50 Identity = 118/163 (72.39%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS016170 vs. NCBI nr
Match: XP_008441017.1 (PREDICTED: autophagy-related protein 13b isoform X1 [Cucumis melo]) HSP 1 Score: 208.4 bits (529), Expect = 4.0e-50 Identity = 118/163 (72.39%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS016170 vs. NCBI nr
Match: XP_004148643.1 (autophagy-related protein 13b [Cucumis sativus] >KAE8647466.1 hypothetical protein Csa_003325 [Cucumis sativus]) HSP 1 Score: 208.4 bits (529), Expect = 4.0e-50 Identity = 118/163 (72.39%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS016170 vs. ExPASy Swiss-Prot
Match: F4J8V5 (Autophagy-related protein 13b OS=Arabidopsis thaliana OX=3702 GN=ATG13B PE=2 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 1.7e-27 Identity = 76/163 (46.63%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of MS016170 vs. ExPASy TrEMBL
Match: A0A6J1BUH2 (autophagy-related protein 13b OS=Momordica charantia OX=3673 GN=LOC111005657 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 3.0e-56 Identity = 128/162 (79.01%), Postives = 132/162 (81.48%), Query Frame = 0
BLAST of MS016170 vs. ExPASy TrEMBL
Match: A0A0A0KFR2 (ATG13 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G484560 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50 Identity = 118/163 (72.39%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS016170 vs. ExPASy TrEMBL
Match: A0A1S3B343 (autophagy-related protein 13b isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485257 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50 Identity = 118/163 (72.39%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS016170 vs. ExPASy TrEMBL
Match: A0A1S3B2G3 (autophagy-related protein 13b isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485257 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.9e-50 Identity = 118/163 (72.39%), Postives = 126/163 (77.30%), Query Frame = 0
BLAST of MS016170 vs. ExPASy TrEMBL
Match: A0A6J1IKL7 (autophagy-related protein 13b OS=Cucurbita maxima OX=3661 GN=LOC111477911 PE=4 SV=1) HSP 1 Score: 203.4 bits (516), Expect = 6.2e-49 Identity = 113/163 (69.33%), Postives = 124/163 (76.07%), Query Frame = 0
BLAST of MS016170 vs. TAIR 10
Match: AT3G18770.1 (Autophagy-related protein 13 ) HSP 1 Score: 123.6 bits (309), Expect = 1.2e-28 Identity = 76/163 (46.63%), Postives = 107/163 (65.64%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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