MS016165 (gene) Bitter gourd (TR) v1

Overview


Name	MS016165
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	40S ribosomal protein SA
Location	scaffold9_2: 831830 .. 834010 (+)
RNA-Seq Expression	MS016165
Synteny	MS016165

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACTGCAACAGCACCGCGTCAACTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCGGCCGAGGTTCATCTAGGAACCAAGAACTGTGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAACGACGGTATTGTTATGAATACATTTTACTTTTAGTCTTCACATTTGTTTAACTCCGTAAAGGACTTCCAAGATAATTGATTAGATTAAGTTTTTAATATTCTCTTTGTATCCCATTCTGGCGGTGGTTTTGCTAGGACCGAAGATTTGAGTGCTAATGGGCGTCCGTTGTTATCTACTTGTCTTTCGCCACCTTAATTTTTAGATATGGAGTTCTCATAATTTCGTCAATGCCTGTGTTTATCTGTGATTCCCTTGTTAAAACTTGTGGTTGTATTACTATTCGTAGACGTGAGCTTTCAGTTTCTGACTAATTTTCAGTTAATCTATTTAGTTTTTACTGTATCGGCCAAGGAACACCGATGAACCATCTCCAATTTATTCAACTATCAGTTTTCGTGTTTGGAGTGCGACACCCACCTGCGATGCTATTTTGAATTTGATCCCAAAATGTTGGTTCATACGGTTGAAAATTTGAAGTACTTAACCTGACCTCTATTTGAAGAATCAGTTTTTTCCCCTATTTTTATGTCCTATCATACGCCTGTTTCGTTAAGGAATTTTGATTTTATTAGTGGTCAACGAGTATTGATCTCTGCTTCATGAATATGTTGTTTATATGAGTTGTTATTATAGTCACATAATATACTGTGAGCTTCTATTTTATTCAGCAAATAACGACGAATGGTTGTTTTTTTAATTCTTTTGCTTTAGGAATTTACATTATTAATCTTGGTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTCAAGATATCATTGTCCAGTCTGCTAGGCCTTATGGTCAGAGAGCCGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACCCCGGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAACCACGACTTCTGATACTTACTGATCCTAGAACTGATCATCAGGTGCTTTAATCCTTTTAAAAGATTAATAATAGTGTGCATTTATAAGTTTTAGTAGAAGAGGATGATATTCTCTTACCAATTCTAGATTCACTCTTGTTTGTTCTCTTAGTCTTGGTTATACGTATACATGACTTCCTAGTTGCTGCTATTTGTGTTGCCTGATTGGTTTCTTGCTTGCAGCCCATCAAGGAAGGTGCACTTGGAAACATTCCTACAATAGCCTTTTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCTAATAACAAGGGGAAACACAGTATAGGATGTCTATTTTGGCTTCTGGCAAGGATGGTTCTACAGATGCGTGGAACAATTCGTGCCGGGCATAAGTGGGACGTGATGGTAAATTCAGAATTATATCTTCTATTTGAACTTAAAATTAAATCAAAGGCTTGGAATGAATGAATGCATGTATTTCTTGTGCAGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAGGCTGTTGCGCCCCCAGATTATGGCATTGCAGATTTTGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGATTTCCGATGCTCAGTGGGGTGCTCCTGATGTGGTTCCAGCTGCTGCTGCTCCACCGGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGGTTGAATCCAATTTTTCTTTTGCGATTCGTTTGAATGTTTGTGTGCCTATATTGTGGTATTGTTGTTAACTTAGACGAGTTACTTTTGCTTAAGTTTTTAGTTAGTACCCAACAGAACCATCTAGCTACCTCGTAACTTGCTATTGCATAGGTTTTGTGTTTTAGACACATTGACCAGGAGTTGTAAGATGCAATGCATAGTAGTTACAGTCAGGCAGGTTCTGTTTTAAGATTTTCATTATGCGTGTTGTGGTCCTACCTCTCATTTCTTTCAATGCCGTTTGGTTTTTTTCAGTTGCTACAGGAGCAGCAGACGGCTGGGATGCTGCAGTCCCACCGCCCGCACCAGCAGTTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC

mRNA sequence

ATGGCGACTGCAACAGCACCGCGTCAACTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCGGCCGAGGTTCATCTAGGAACCAAGAACTGTGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAACGACGGAATTTACATTATTAATCTTGGTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTCAAGATATCATTGTCCAGTCTGCTAGGCCTTATGGTCAGAGAGCCGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACCCCGGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAACCACGACTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCACTTGGAAACATTCCTACAATAGCCTTTTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCTAATAACAAGGGGAAACACAGTATAGGATGTCTATTTTGGCTTCTGGCAAGGATGGTTCTACAGATGCGTGGAACAATTCGTGCCGGGCATAAGTGGGACGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAGGCTGTTGCGCCCCCAGATTATGGCATTGCAGATTTTGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGATTTCCGATGCTCAGTGGGGTGCTCCTGATGTGGTTCCAGCTGCTGCTGCTCCACCGGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGTTGCTACAGGAGCAGCAGACGGCTGGGATGCTGCAGTCCCACCGCCCGCACCAGCAGTTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC

Coding sequence (CDS)

ATGGCGACTGCAACAGCACCGCGTCAACTCTCGCAGAAGGAGGCCGACATCCAGATGATGTTGGCGGCCGAGGTTCATCTAGGAACCAAGAACTGTGACTTCCAAATGGAGCGATACGTTTTCAAGCGCCGGAACGACGGAATTTACATTATTAATCTTGGTAAGACATGGGAGAAACTCCAATTGGCTGCCAGAGTAATTGTGGCTATTGAGAATCCTCAAGATATCATTGTCCAGTCTGCTAGGCCTTATGGTCAGAGAGCCGTTTTGAAGTTTGCTCAATACACTGGTGCTCATGCAATTGCTGGAAGGCACACCCCGGGAACATTCACCAACCAGCTTCAGACCTCATTCAACGAACCACGACTTCTGATACTTACTGATCCTAGAACTGATCATCAGCCCATCAAGGAAGGTGCACTTGGAAACATTCCTACAATAGCCTTTTGTGACACTGATTCACCAATGCGGTATGTTGATATTGGGATTCCAGCTAATAACAAGGGGAAACACAGTATAGGATGTCTATTTTGGCTTCTGGCAAGGATGGTTCTACAGATGCGTGGAACAATTCGTGCCGGGCATAAGTGGGACGTGATGGTGGATTTGTTTTTCTATCGGGAGCCTGAGGAAGCTAAGGAGCAAGAAGAAGAAGAGGCTGTTGCGCCCCCAGATTATGGCATTGCAGATTTTGGAGCTGCTCCGCTTGTTGCTTCAGATCAATGGGCTGGACAGATTTCCGATGCTCAGTGGGGTGCTCCTGATGTGGTTCCAGCTGCTGCTGCTCCACCGGTTTCAAATGTCGAGTGGTCCCAAGAGCCAGTTGCTACAGGAGCAGCAGACGGCTGGGATGCTGCAGTCCCACCGCCCGCACCAGCAGTTGAAGGTGGTGCACCTCCGGCTTCCGGTTGGTTC

Protein sequence

MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPPASGWF

Homology

[Close]

BLAST of MS016165 vs. NCBI nr
Match: XP_022152685.1 (40S ribosomal protein SA-like [Momordica charantia])

HSP 1 Score: 614.0 bits (1582), Expect = 7.0e-172
Identity = 304/305 (99.67%), Postives = 304/305 (99.67%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASD 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA PDYGIADFGAAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA-PDYGIADFGAAPLVASD 240

Query: 241 QWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP 300
           QWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP
Sbjct: 241 QWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP 300

Query: 301 ASGWF 306
           ASGWF
Sbjct: 301 ASGWF 304

[Close]

BLAST of MS016165 vs. NCBI nr
Match: XP_038903491.1 (40S ribosomal protein SA-like [Benincasa hispida])

HSP 1 Score: 577.0 bits (1486), Expect = 9.5e-161
Identity = 285/308 (92.53%), Postives = 294/308 (95.45%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G A LV+SD
Sbjct: 181 ARMVLQMRGTIRAGHEWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGASLVSSD 240

Query: 241 QWAGQISDAQWGAPDVVPA---AAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG 300
           QWAGQISDAQWGAPDVVPA     APPV NVEW+QEPVA  A+DGWDAAVPPPAP+ EGG
Sbjct: 241 QWAGQISDAQWGAPDVVPAPDGVIAPPVPNVEWTQEPVAL-ASDGWDAAVPPPAPSAEGG 300

Query: 301 APPASGWF 306
           APPA+ WF
Sbjct: 301 APPAASWF 307

[Close]

BLAST of MS016165 vs. NCBI nr
Match: XP_008460336.2 (PREDICTED: 40S ribosomal protein SA-like [Cucumis melo])

HSP 1 Score: 573.9 bits (1478), Expect = 8.0e-160
Identity = 286/309 (92.56%), Postives = 294/309 (95.15%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEG 300
           QWAGQISDAQWGAPD++PA  A    PPVSNVEW+QEPVA  A+DGWDAAVPPPAPA EG
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPVAL-ASDGWDAAVPPPAPAAEG 300

Query: 301 GAPPASGWF 306
           GAP AS WF
Sbjct: 301 GAPAAS-WF 307

[Close]

BLAST of MS016165 vs. NCBI nr
Match: XP_004144441.1 (40S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical protein Csa_002182 [Cucumis sativus])

HSP 1 Score: 573.9 bits (1478), Expect = 8.0e-160
Identity = 284/310 (91.61%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE 300
           QWAGQISDAQWGAPD++PA  A     PPVSNVEW+QEPV   A+DGWDAA PPPAP+ E
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPPASGWF 306
           GGAP AS WF
Sbjct: 301 GGAPAAS-WF 309

[Close]

BLAST of MS016165 vs. NCBI nr
Match: XP_022155491.1 (40S ribosomal protein SA-like [Momordica charantia] >XP_022158790.1 40S ribosomal protein SA-like [Momordica charantia])

HSP 1 Score: 573.2 bits (1476), Expect = 1.4e-159
Identity = 285/307 (92.83%), Postives = 291/307 (94.79%), Query Frame = 0


Query: 1   MATATA-PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT  A PRQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEA APPDYGIADFGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVAS 240

Query: 241 DQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDA-AVPPPAPAVEGGA 300
           DQWAGQI DAQWGAPDVV  AAA PVS+VEW+QEP A+GAADGWDA  VPPPAPAV+  A
Sbjct: 241 DQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPAVDSAA 300

Query: 301 PPASGWF 306
           PPA+ WF
Sbjct: 301 PPAASWF 307

[Close]

BLAST of MS016165 vs. ExPASy Swiss-Prot
Match: A5BUU4 (40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV=1)

HSP 1 Score: 467.2 bits (1201), Expect = 1.4e-130
Identity = 245/314 (78.03%), Postives = 254/314 (80.89%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           AT  R LSQKE DIQMMLAAEVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKLQLA
Sbjct: 2   ATPTRALSQKEQDIQMMLAAEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKLQLA 61

Query: 64  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPL--VASDQ 243
           VLQMR TI  GHKWDVMVDLFFYREPEE KEQE +E VA PDYGI D+ A  L  +    
Sbjct: 182 VLQMRRTIAPGHKWDVMVDLFFYREPEEPKEQEGDEVVAAPDYGITDYQATALGGLGGGD 241

Query: 244 WAGQISDA-QWGAPDVVPAAAAPPVSNVEW-------SQEPVATGAADGWDAAVPPPA-- 303
           W   I+DA QWGA DV   A  P V    W       S  P+AT   DGWDAA  PP   
Sbjct: 242 WGAPITDAPQWGA-DVPAVAPIPAVPGSNWGDAAPMPSAVPIAT---DGWDAAAAPPVAV 301

Query: 304 -PAVEGGAPPASGW 305
            P V  G PP +GW
Sbjct: 302 PPPVVEGVPPPAGW 311

[Close]

BLAST of MS016165 vs. ExPASy Swiss-Prot
Match: O22518 (40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 461.8 bits (1187), Expect = 5.8e-129
Identity = 245/308 (79.55%), Postives = 250/308 (81.17%), Query Frame = 0


Query: 2   ATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQ 61
           A A  PRQLSQKEADIQMMLAA+VHLGTKNCDFQMERY+FKRRNDGIYIINLGKTWEKLQ
Sbjct: 7   AAAAPPRQLSQKEADIQMMLAADVHLGTKNCDFQMERYIFKRRNDGIYIINLGKTWEKLQ 66

Query: 62  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEP 121
           LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EP
Sbjct: 67  LAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEP 126

Query: 122 RLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 181
           RLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA
Sbjct: 127 RLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLA 186

Query: 182 RMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQ 241
           RMVLQMRGTIR G KWDVMVDLFFYREPEEAK+QEEEEA A  DY I DF A  + A  Q
Sbjct: 187 RMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQQEEEEAPA-VDYAITDFNAGAIAADGQ 246

Query: 242 WAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADG-WDAAVPPP--APAVEGGA 301
           W G I D  W   D VP    P V  V W     A  AA G W  AVPPP   P    G 
Sbjct: 247 WPGTI-DQSWS--DAVP-QPIPAVPGVNWGAPAEAPAAAGGDWGEAVPPPQQIPVPPSGI 306

Query: 302 PPA--SGW 305
                SGW
Sbjct: 307 DTVQPSGW 309

[Close]

BLAST of MS016165 vs. ExPASy Swiss-Prot
Match: O80377 (40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1)

HSP 1 Score: 454.5 bits (1168), Expect = 9.3e-127
Identity = 235/303 (77.56%), Postives = 251/303 (82.84%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           A+  R+LS  EADIQMM AAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL LA
Sbjct: 2   ASGARELSTMEADIQMMCAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLMLA 61

Query: 64  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIV+IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+EPRL
Sbjct: 62  ARVIVSIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFSEPRL 121

Query: 124 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 122 LILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 181

Query: 184 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQWA 243
           VLQMRG I  GHKW+VMVDLFFYREPEE K+QEEE+ +   DY +AD+ AAP+  +DQW 
Sbjct: 182 VLQMRGVISQGHKWEVMVDLFFYREPEETKDQEEED-LPVGDY-VADYAAAPIGGADQW- 241

Query: 244 GQISDAQWGAPDVVPAAAAPPVSNVEWSQE-PVATGAADGWDAAVPPPAPAVEG-GAPPA 303
             I DAQWG   V PA +A P     W+   P+   A DGWDAA  PP P   G   P  
Sbjct: 242 NAIPDAQWGGDVVQPANSAVPAGT--WTDAGPI---AGDGWDAAAAPPVPGAVGLDVPAP 296

Query: 304 SGW 305
           +GW
Sbjct: 302 TGW 296

[Close]

BLAST of MS016165 vs. ExPASy Swiss-Prot
Match: O65751 (40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1)

HSP 1 Score: 449.1 bits (1154), Expect = 3.9e-125
Identity = 235/307 (76.55%), Postives = 250/307 (81.43%), Query Frame = 0


Query: 1   MATATAP-RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT TAP RQL+QKEADIQMMLAA+VHLGTKNC+FQMERY+FKRRNDGIYIINLGKTW+K
Sbjct: 1   MATTTAPSRQLTQKEADIQMMLAADVHLGTKNCNFQMERYIFKRRNDGIYIINLGKTWDK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           L LAAR+IVAIEN QDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF+
Sbjct: 61  LNLAARIIVAIENSQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFS 120

Query: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPM YVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMNYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVAS 240
           LARMVLQMRGTIR G KWDVMVDLFFYREPEEAK+ EE+E VA PDY IADF  + + + 
Sbjct: 181 LARMVLQMRGTIRPGLKWDVMVDLFFYREPEEAKQPEEDE-VAAPDYAIADFNVSAIPSD 240

Query: 241 DQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG-- 300
            QW   I D  W   D VP    P V  V W+      G    W  AVPPP      G  
Sbjct: 241 GQWPAAI-DQPWN--DAVP-QPIPAVPAVNWAAPEAVAG---DWGEAVPPPQQIPTAGIE 299

Query: 301 APPASGW 305
           + PA+GW
Sbjct: 301 SVPATGW 299

[Close]

BLAST of MS016165 vs. ExPASy Swiss-Prot
Match: Q08682 (40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3)

HSP 1 Score: 436.8 bits (1122), Expect = 2.0e-121
Identity = 225/307 (73.29%), Postives = 247/307 (80.46%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG 300
            DQW   QI DA W      P +AAP  ++  WS +  A  A  GW+AA PP        
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAAS--WS-DSAAAPADGGWEAAAPP-------S 297

Query: 301 APPASGW 305
             PA+GW
Sbjct: 301 GAPAAGW 297

[Close]

BLAST of MS016165 vs. ExPASy TrEMBL
Match: A0A6J1DEM6 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111020345 PE=3 SV=1)

HSP 1 Score: 614.0 bits (1582), Expect = 3.4e-172
Identity = 304/305 (99.67%), Postives = 304/305 (99.67%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASD 240
           ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA PDYGIADFGAAPLVASD
Sbjct: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVA-PDYGIADFGAAPLVASD 240

Query: 241 QWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP 300
           QWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP
Sbjct: 241 QWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGGAPP 300

Query: 301 ASGWF 306
           ASGWF
Sbjct: 301 ASGWF 304

[Close]

BLAST of MS016165 vs. ExPASy TrEMBL
Match: A0A0A0L946 (40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 3.9e-160
Identity = 284/310 (91.61%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDVVPAAAA-----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE 300
           QWAGQISDAQWGAPD++PA  A     PPVSNVEW+QEPV   A+DGWDAA PPPAP+ E
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAPVVVPPVSNVEWTQEPVVAIASDGWDAAAPPPAPSAE 300

Query: 301 GGAPPASGWF 306
           GGAP AS WF
Sbjct: 301 GGAPAAS-WF 309

[Close]

BLAST of MS016165 vs. ExPASy TrEMBL
Match: A0A1S3CDH5 (40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1)

HSP 1 Score: 573.9 bits (1478), Expect = 3.9e-160
Identity = 286/309 (92.56%), Postives = 294/309 (95.15%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MAT TAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATTTAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQ+TGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQHTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASD 240
           ARMVLQMRGTIRAGH+WDVMVDLFFYREPEEAKE+EEEEAVAPPDYGIAD+G APLVASD
Sbjct: 181 ARMVLQMRGTIRAGHQWDVMVDLFFYREPEEAKEKEEEEAVAPPDYGIADYGGAPLVASD 240

Query: 241 QWAGQISDAQWGAPDVVPAAAA----PPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEG 300
           QWAGQISDAQWGAPD++PA  A    PPVSNVEW+QEPVA  A+DGWDAAVPPPAPA EG
Sbjct: 241 QWAGQISDAQWGAPDLIPAPDAAVVVPPVSNVEWTQEPVAL-ASDGWDAAVPPPAPAAEG 300

Query: 301 GAPPASGWF 306
           GAP AS WF
Sbjct: 301 GAPAAS-WF 307

[Close]

BLAST of MS016165 vs. ExPASy TrEMBL
Match: A0A6J1DWT5 (40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111025257 PE=3 SV=1)

HSP 1 Score: 573.2 bits (1476), Expect = 6.6e-160
Identity = 285/307 (92.83%), Postives = 291/307 (94.79%), Query Frame = 0


Query: 1   MATATA-PRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEK 60
           MAT  A PRQLSQKEADIQMMLAAEVHLGTKN DFQMERY+FKRRNDGIYIINLGKTWEK
Sbjct: 1   MATGAAPPRQLSQKEADIQMMLAAEVHLGTKNSDFQMERYIFKRRNDGIYIINLGKTWEK 60

Query: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120
           LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN
Sbjct: 61  LQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFN 120

Query: 121 EPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180
           EPRLLILTDPRTDHQPIKE ALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL
Sbjct: 121 EPRLLILTDPRTDHQPIKEAALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWL 180

Query: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVAS 240
           LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEA APPDYGIADFGAAPLVAS
Sbjct: 181 LARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAAAPPDYGIADFGAAPLVAS 240

Query: 241 DQWAGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDA-AVPPPAPAVEGGA 300
           DQWAGQI DAQWGAPDVV  AAA PVS+VEW+QEP A+GAADGWDA  VPPPAPAV+  A
Sbjct: 241 DQWAGQIPDAQWGAPDVVVPAAAAPVSSVEWAQEPAASGAADGWDAPVVPPPAPAVDSAA 300

Query: 301 PPASGWF 306
           PPA+ WF
Sbjct: 301 PPAASWF 307

[Close]

BLAST of MS016165 vs. ExPASy TrEMBL
Match: A0A6J1IX68 (40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111479974 PE=3 SV=1)

HSP 1 Score: 569.7 bits (1467), Expect = 7.3e-159
Identity = 285/310 (91.94%), Postives = 293/310 (94.52%), Query Frame = 0


Query: 1   MATATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKL 60
           MATAT PRQLSQKEADIQMMLA+EVHLGTKNC+FQMERYVFKRRNDGIYIINLGKTWEKL
Sbjct: 1   MATATPPRQLSQKEADIQMMLASEVHLGTKNCNFQMERYVFKRRNDGIYIINLGKTWEKL 60

Query: 61  QLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120
           QLAARVIV IENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE
Sbjct: 61  QLAARVIVGIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNE 120

Query: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180
           PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL
Sbjct: 121 PRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLL 180

Query: 181 ARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPP-DYGIADFGAAPLVAS 240
           ARMVLQMRGTIRAG KWDVMVDLFFYREPEEAKE+EEEEA+A P DYGIADFGAAPLV S
Sbjct: 181 ARMVLQMRGTIRAGLKWDVMVDLFFYREPEEAKEKEEEEAIAAPLDYGIADFGAAPLVTS 240

Query: 241 DQWAGQISDAQWGAPDVVP----AAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVE 300
           DQWAGQISDAQWGAPDVVP    A   PPVSNVEWSQEPVA  ++DGW AAVPPPAP+VE
Sbjct: 241 DQWAGQISDAQWGAPDVVPPPDAALVPPPVSNVEWSQEPVA--SSDGWQAAVPPPAPSVE 300

Query: 301 GGAPPASGWF 306
           GGAPPA+ WF
Sbjct: 301 GGAPPAASWF 308

[Close]

BLAST of MS016165 vs. TAIR 10
Match: AT1G72370.1 (40s ribosomal protein SA )

HSP 1 Score: 436.8 bits (1122), Expect = 1.4e-122
Identity = 225/307 (73.29%), Postives = 247/307 (80.46%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG 300
            DQW   QI DA W      P +AAP  ++  WS +  A  A  GW+AA PP        
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAAS--WS-DSAAAPADGGWEAAAPP-------S 297

Query: 301 APPASGW 305
             PA+GW
Sbjct: 301 GAPAAGW 297

[Close]

BLAST of MS016165 vs. TAIR 10
Match: AT1G72370.2 (40s ribosomal protein SA )

HSP 1 Score: 434.9 bits (1117), Expect = 5.4e-122
Identity = 224/307 (72.96%), Postives = 245/307 (79.80%), Query Frame = 0


Query: 1   MAT--ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWE 60
           MAT  + +  QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWE
Sbjct: 1   MATNGSASSAQLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWE 60

Query: 61  KLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSF 120
           KLQ+AARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGA+AIAGRHTPGTFTNQ+QTSF
Sbjct: 61  KLQMAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSF 120

Query: 121 NEPRLLILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFW 180
           +EPRLLILTDPRTDHQPIKEGALGNIP IAFCDTDSPMR+VDIGIPANNKGKHSIGCLFW
Sbjct: 121 SEPRLLILTDPRTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180

Query: 181 LLARMVLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVA 240
           LLARMVLQMRGTI AG KWDVMVDLFFYREPEE K ++E+EA    +YG        +V 
Sbjct: 181 LLARMVLQMRGTIAAGQKWDVMVDLFFYREPEETKPEDEDEAGPQAEYGALPAPEYGMVG 240

Query: 241 SDQW-AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPAPAVEGG 300
            DQW   QI DA W      P +AAP  ++  WS       A  GW+AA PP        
Sbjct: 241 GDQWTTAQIPDAAWPGEGQAPISAAPAAAS--WSD-----SADGGWEAAAPP-------S 293

Query: 301 APPASGW 305
             PA+GW
Sbjct: 301 GAPAAGW 293

[Close]

BLAST of MS016165 vs. TAIR 10
Match: AT3G04770.2 (40s ribosomal protein SA B )

HSP 1 Score: 426.4 bits (1095), Expect = 1.9e-119
Identity = 218/289 (75.43%), Postives = 238/289 (82.35%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHKWDVMVDLFFYREPEEAKEQEEEEAVAPPDYGIADFGAAPLVASDQW- 243
           VLQMRGTI A  KWDVMVDLFFYREPEEAK++ +EEA    DYG        +V  DQW 
Sbjct: 187 VLQMRGTILAAQKWDVMVDLFFYREPEEAKQEGDEEAEVQADYG--------MVGGDQWT 246

Query: 244 AGQISDAQWGAPDVVPAAAAPPVSNVEWSQEPVATGAADGWDAAVPPPA 292
             QISDA W      P +AAP           V    A GW+AA  P A
Sbjct: 247 TAQISDAAWSGEVEQPISAAP----------AVGVTVAAGWEAASVPAA 277

[Close]

BLAST of MS016165 vs. TAIR 10
Match: AT3G04770.1 (40s ribosomal protein SA B )

HSP 1 Score: 374.4 bits (960), Expect = 8.7e-104
Identity = 178/199 (89.45%), Postives = 193/199 (96.98%), Query Frame = 0


Query: 4   ATAPRQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLA 63
           ATA RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+A
Sbjct: 7   ATAGRQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMA 66

Query: 64  ARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHTPGTFTNQLQTSFNEPRL 123
           ARVIVAIENP+DIIVQSARPYGQRAVLKFAQYTG +AIAGRHTPGTFTNQ+QTSF+EPRL
Sbjct: 67  ARVIVAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPGTFTNQMQTSFSEPRL 126

Query: 124 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMRYVDIGIPANNKGKHSIGCLFWLLARM 183
           LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPM +VDIGIPANNKGKHSIGCLFWLLARM
Sbjct: 127 LILTDPRTDHQPIKEGALGNIPTIAFCDTDSPMGFVDIGIPANNKGKHSIGCLFWLLARM 186

Query: 184 VLQMRGTIRAGHKWDVMVD 203
           VLQMRGTI A  KWDVMV+
Sbjct: 187 VLQMRGTILAAQKWDVMVN 205

The following BLAST results are available for this feature:

BLAST of MS016165 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152685.1	7.0e-172	99.67	40S ribosomal protein SA-like [Momordica charantia]	[more]
XP_038903491.1	9.5e-161	92.53	40S ribosomal protein SA-like [Benincasa hispida]	[more]
XP_008460336.2	8.0e-160	92.56	PREDICTED: 40S ribosomal protein SA-like [Cucumis melo]	[more]
XP_004144441.1	8.0e-160	91.61	40S ribosomal protein SA isoform X1 [Cucumis sativus] >KGN58465.1 hypothetical p...	[more]
XP_022155491.1	1.4e-159	92.83	40S ribosomal protein SA-like [Momordica charantia] >XP_022158790.1 40S ribosoma...	[more]

BLAST of MS016165 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A5BUU4	1.4e-130	78.03	40S ribosomal protein SA OS=Vitis vinifera OX=29760 GN=GSVIVT00034021001 PE=3 SV...	[more]
O22518	5.8e-129	79.55	40S ribosomal protein SA OS=Glycine max OX=3847 PE=2 SV=1	[more]
O80377	9.3e-127	77.56	40S ribosomal protein SA OS=Daucus carota OX=4039 GN=179B PE=2 SV=1	[more]
O65751	3.9e-125	76.55	40S ribosomal protein SA OS=Cicer arietinum OX=3827 GN=RAP40 PE=2 SV=1	[more]
Q08682	2.0e-121	73.29	40S ribosomal protein Sa-1 OS=Arabidopsis thaliana OX=3702 GN=RPSaA PE=1 SV=3	[more]

BLAST of MS016165 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DEM6	3.4e-172	99.67	40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111020345 PE=3 SV=...	[more]
A0A0A0L946	3.9e-160	91.61	40S ribosomal protein SA OS=Cucumis sativus OX=3659 GN=Csa_3G646520 PE=3 SV=1	[more]
A0A1S3CDH5	3.9e-160	92.56	40S ribosomal protein SA OS=Cucumis melo OX=3656 GN=LOC103499190 PE=3 SV=1	[more]
A0A6J1DWT5	6.6e-160	92.83	40S ribosomal protein SA OS=Momordica charantia OX=3673 GN=LOC111025257 PE=3 SV=...	[more]
A0A6J1IX68	7.3e-159	91.94	40S ribosomal protein SA OS=Cucurbita maxima OX=3661 GN=LOC111479974 PE=3 SV=1	[more]

BLAST of MS016165 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G72370.1	1.4e-122	73.29	40s ribosomal protein SA	[more]
AT1G72370.2	5.4e-122	72.96	40s ribosomal protein SA	[more]
AT3G04770.2	1.9e-119	75.43	40s ribosomal protein SA B	[more]
AT3G04770.1	8.7e-104	89.45	40s ribosomal protein SA B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001865	Ribosomal protein S2	PRINTS	PR00395	RIBOSOMALS2	coord: 47..56 score: 64.92 coord: 159..173 score: 53.64 coord: 17..35 score: 36.11 coord: 138..149 score: 46.03 coord: 96..113 score: 47.01 coord: 121..138 score: 44.62
IPR001865	Ribosomal protein S2	PFAM	PF00318	Ribosomal_S2	coord: 119..184 e-value: 5.9E-11 score: 42.0 coord: 20..113 e-value: 4.2E-13 score: 49.0
IPR001865	Ribosomal protein S2	CDD	cd01425	RPS2	coord: 20..186 e-value: 5.4576E-72 score: 218.605
None	No IPR available	GENE3D	3.40.50.10490		coord: 16..222 e-value: 4.1E-104 score: 348.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 280..305
None	No IPR available	PANTHER	PTHR11489:SF25	40S RIBOSOMAL PROTEIN SA	coord: 9..304
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	TIGRFAM	TIGR01012	TIGR01012	coord: 12..208 e-value: 1.5E-96 score: 319.5
IPR005707	Ribosomal protein S2, eukaryotic/archaeal	PANTHER	PTHR11489	40S RIBOSOMAL PROTEIN SA	coord: 9..304
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00962	RIBOSOMAL_S2_1	coord: 17..28
IPR018130	Ribosomal protein S2, conserved site	PROSITE	PS00963	RIBOSOMAL_S2_2	coord: 121..145
IPR027498	Ribosomal protein S2, eukaryotic	HAMAP	MF_03015	Ribosomal_S2_euk	coord: 4..273 score: 50.762222
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily	SUPERFAMILY	52313	Ribosomal protein S2	coord: 12..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016165.1	MS016165.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
cellular_component	GO:0015935	small ribosomal subunit
molecular_function	GO:0003735	structural constituent of ribosome