MS016164 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCAAGCTCGGCAAGCTCACAAAACTCAAATCCGCCATCAAACGCTGGCCCTCCATCTCCAAGCTCGCCCGCTCCGCCCCCGCCTCCGCCTCCGCCTCCGTCTCCTCCGCCGCCCACCTCCACCCGGTCCTCGTCGGCAGGTCCCGCCGCCGCTACCTCGTCGGCTCCGACGTCGTCGACCACCCGCTCTTCCGTGAGCTGGTTGACAAGTCGTCCGGGGAATCCGACGACATGGAGCAGGGGCAGGGGCTTGTCGTCTCCTGCGAGGTGGTGCTGTTCGAGCACTTGTTGTGGATGCTAGAAAATGCCGCCACTCAGCTGGGCTCCGCCGACGAGCTCGTCGAATTCTACACA ATGGCCAAGCTCGGCAAGCTCACAAAACTCAAATCCGCCATCAAACGCTGGCCCTCCATCTCCAAGCTCGCCCGCTCCGCCCCCGCCTCCGCCTCCGCCTCCGTCTCCTCCGCCGCCCACCTCCACCCGGTCCTCGTCGGCAGGTCCCGCCGCCGCTACCTCGTCGGCTCCGACGTCGTCGACCACCCGCTCTTCCGTGAGCTGGTTGACAAGTCGTCCGGGGAATCCGACGACATGGAGCAGGGGCAGGGGCTTGTCGTCTCCTGCGAGGTGGTGCTGTTCGAGCACTTGTTGTGGATGCTAGAAAATGCCGCCACTCAGCTGGGCTCCGCCGACGAGCTCGTCGAATTCTACACA ATGGCCAAGCTCGGCAAGCTCACAAAACTCAAATCCGCCATCAAACGCTGGCCCTCCATCTCCAAGCTCGCCCGCTCCGCCCCCGCCTCCGCCTCCGCCTCCGTCTCCTCCGCCGCCCACCTCCACCCGGTCCTCGTCGGCAGGTCCCGCCGCCGCTACCTCGTCGGCTCCGACGTCGTCGACCACCCGCTCTTCCGTGAGCTGGTTGACAAGTCGTCCGGGGAATCCGACGACATGGAGCAGGGGCAGGGGCTTGTCGTCTCCTGCGAGGTGGTGCTGTTCGAGCACTTGTTGTGGATGCTAGAAAATGCCGCCACTCAGCTGGGCTCCGCCGACGAGCTCGTCGAATTCTACACA MAKLGKLTKLKSAIKRWPSISKLARSAPASASASVSSAAHLHPVLVGRSRRRYLVGSDVVDHPLFRELVDKSSGESDDMEQGQGLVVSCEVVLFEHLLWMLENAATQLGSADELVEFYT Homology
BLAST of MS016164 vs. NCBI nr
Match: XP_022152670.1 (uncharacterized protein LOC111020334 [Momordica charantia]) HSP 1 Score: 229.2 bits (583), Expect = 1.9e-56 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of MS016164 vs. NCBI nr
Match: XP_038901184.1 (auxin-responsive protein SAUR78-like [Benincasa hispida]) HSP 1 Score: 178.3 bits (451), Expect = 3.8e-41 Identity = 97/128 (75.78%), Postives = 107/128 (83.59%), Query Frame = 0
BLAST of MS016164 vs. NCBI nr
Match: XP_011651720.1 (auxin-responsive protein SAUR78 [Cucumis sativus]) HSP 1 Score: 172.2 bits (435), Expect = 2.7e-39 Identity = 93/129 (72.09%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of MS016164 vs. NCBI nr
Match: XP_016902534.1 (PREDICTED: auxin-responsive protein SAUR71-like [Cucumis melo] >KAA0053538.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa] >TYK19130.1 auxin-responsive protein SAUR71-like [Cucumis melo var. makuwa]) HSP 1 Score: 171.4 bits (433), Expect = 4.7e-39 Identity = 95/130 (73.08%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of MS016164 vs. NCBI nr
Match: XP_022955880.1 (auxin-responsive protein SAUR50-like [Cucurbita moschata] >XP_023527039.1 auxin-responsive protein SAUR50-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 167.2 bits (422), Expect = 8.8e-38 Identity = 90/121 (74.38%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of MS016164 vs. ExPASy Swiss-Prot
Match: Q9C9E1 (Auxin-responsive protein SAUR78 OS=Arabidopsis thaliana OX=3702 GN=SAUR78 PE=1 SV=1) HSP 1 Score: 120.9 bits (302), Expect = 9.5e-27 Identity = 66/121 (54.55%), Postives = 91/121 (75.21%), Query Frame = 0
BLAST of MS016164 vs. ExPASy Swiss-Prot
Match: Q9LQI6 (Auxin-responsive protein SAUR77 OS=Arabidopsis thaliana OX=3702 GN=SAUR77 PE=1 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 6.2e-26 Identity = 65/130 (50.00%), Postives = 90/130 (69.23%), Query Frame = 0
BLAST of MS016164 vs. ExPASy Swiss-Prot
Match: Q29PU2 (Auxin-responsive protein SAUR76 OS=Arabidopsis thaliana OX=3702 GN=SAUR76 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 4.0e-17 Identity = 65/130 (50.00%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of MS016164 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 45.4 bits (106), Expect = 5.1e-04 Identity = 28/89 (31.46%), Postives = 49/89 (55.06%), Query Frame = 0
BLAST of MS016164 vs. ExPASy TrEMBL
Match: A0A6J1DEL2 (uncharacterized protein LOC111020334 OS=Momordica charantia OX=3673 GN=LOC111020334 PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 9.2e-57 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of MS016164 vs. ExPASy TrEMBL
Match: A0A0A0LBZ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G646510 PE=3 SV=1) HSP 1 Score: 172.2 bits (435), Expect = 1.3e-39 Identity = 93/129 (72.09%), Postives = 106/129 (82.17%), Query Frame = 0
BLAST of MS016164 vs. ExPASy TrEMBL
Match: A0A5D3D6I8 (Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00520 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39 Identity = 95/130 (73.08%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of MS016164 vs. ExPASy TrEMBL
Match: A0A1S4E2S4 (auxin-responsive protein SAUR71-like OS=Cucumis melo OX=3656 GN=LOC103499187 PE=3 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39 Identity = 95/130 (73.08%), Postives = 105/130 (80.77%), Query Frame = 0
BLAST of MS016164 vs. ExPASy TrEMBL
Match: A0A6J1GWA8 (auxin-responsive protein SAUR50-like OS=Cucurbita moschata OX=3662 GN=LOC111457732 PE=3 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 4.3e-38 Identity = 90/121 (74.38%), Postives = 103/121 (85.12%), Query Frame = 0
BLAST of MS016164 vs. TAIR 10
Match: AT1G72430.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 120.9 bits (302), Expect = 6.8e-28 Identity = 66/121 (54.55%), Postives = 91/121 (75.21%), Query Frame = 0
BLAST of MS016164 vs. TAIR 10
Match: AT1G17345.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 118.2 bits (295), Expect = 4.4e-27 Identity = 65/130 (50.00%), Postives = 90/130 (69.23%), Query Frame = 0
BLAST of MS016164 vs. TAIR 10
Match: AT5G20820.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18 Identity = 65/130 (50.00%), Postives = 75/130 (57.69%), Query Frame = 0
BLAST of MS016164 vs. TAIR 10
Match: AT3G12955.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 62.0 bits (149), Expect = 3.7e-10 Identity = 42/105 (40.00%), Postives = 55/105 (52.38%), Query Frame = 0
BLAST of MS016164 vs. TAIR 10
Match: AT2G35290.1 (unknown protein; Has 39 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 48.1 bits (113), Expect = 5.6e-06 Identity = 26/80 (32.50%), Postives = 44/80 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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