MS016126 (gene) Bitter gourd (TR) v1
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Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTGGAGAGGTTCTACTTCCACTCCAAACATCAAGCTACCTTCTGCGAGGTGTTGTACGGATTTATTCAGAGCAAATTGATTATTTAAAACAGGATCTTGATGTTATGTTTGGAGAGGTTCTACTTCCACTCCAAACATCAAGCTACCTTCTGCGAGGTGTTGTACGGATTTATTCAGAGCAAATTGATTATTTAAAACAGGATCTTGATGTTATG TTTGGAGAGGTTCTACTTCCACTCCAAACATCAAGCTACCTTCTGCGAGGTGTTGTACGGATTTATTCAGAGCAAATTGATTATTTAAAACAGGATCTTGATGTTATG FGEVLLPLQTSSYLLRGVVRIYSEQIDYLKQDLDVM Homology
BLAST of MS016126 vs. NCBI nr
Match: XP_038881442.1 (sister chromatid cohesion 1 protein 3 isoform X3 [Benincasa hispida]) HSP 1 Score: 57.4 bits (137), Expect = 3.0e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. NCBI nr
Match: KAG6581597.1 (putative helicase MAGATAMA 3, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 57.4 bits (137), Expect = 3.0e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. NCBI nr
Match: XP_022158405.1 (sister chromatid cohesion 1 protein 3-like isoform X2 [Momordica charantia]) HSP 1 Score: 57.4 bits (137), Expect = 3.0e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. NCBI nr
Match: XP_011653424.1 (sister chromatid cohesion 1 protein 3 [Cucumis sativus] >XP_011653425.1 sister chromatid cohesion 1 protein 3 [Cucumis sativus] >KGN53826.1 hypothetical protein Csa_015154 [Cucumis sativus]) HSP 1 Score: 57.4 bits (137), Expect = 3.0e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. NCBI nr
Match: KAA0053180.1 (sister chromatid cohesion 1 protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 57.4 bits (137), Expect = 3.0e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. ExPASy Swiss-Prot
Match: Q9FQ19 (Sister chromatid cohesion 1 protein 3 OS=Arabidopsis thaliana OX=3702 GN=SYN3 PE=2 SV=2) HSP 1 Score: 43.1 bits (100), Expect = 7.6e-04 Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 0
BLAST of MS016126 vs. ExPASy TrEMBL
Match: A0A6J1J0M2 (sister chromatid cohesion 1 protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111482391 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. ExPASy TrEMBL
Match: A0A1S3CDP3 (sister chromatid cohesion 1 protein 3 OS=Cucumis melo OX=3656 GN=LOC103499554 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. ExPASy TrEMBL
Match: A0A6J1F6W9 (sister chromatid cohesion 1 protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111441413 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. ExPASy TrEMBL
Match: A0A5A7UD91 (Sister chromatid cohesion 1 protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold1192G00010 PE=3 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. ExPASy TrEMBL
Match: A0A5D3BMF0 (Sister chromatid cohesion 1 protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold2510G00530 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 1.4e-05 Identity = 28/36 (77.78%), Postives = 32/36 (88.89%), Query Frame = 0
BLAST of MS016126 vs. TAIR 10
Match: AT3G59550.1 (Rad21/Rec8-like family protein ) HSP 1 Score: 43.1 bits (100), Expect = 5.4e-05 Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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