MS016125 (gene) Bitter gourd (TR) v1

Overview


Name	MS016125
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	60S ribosomal protein L6
Location	scaffold9_2: 532525 .. 534431 (-)
RNA-Seq Expression	MS016125
Synteny	MS016125

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGGTTTCGGCGAGGAGAAGAGAGTTCCCAATTCCGAAAAGATCATCAATGGCGCCGAAGACAGCCAAAGTCAGCAGGAACCCCGATCTCATTCGTGGGGTTGGCAAATATTCGAGGTCGAAGATGTACCATAAGCGAGGTCTGTGGGCAATCAAGGCCAAGAACGGAGGTGCCTTCCCTCAACACGATCTCAAGCCTAAGGCCGACGCTCCGGCAGAGAAGCCGCCCAAGTTTTACCCTGCCGACGACGTTAAGAAACCGCTTGTTAACAAGCGCAAGCCTAAGCCCACCAAGCTCAGGTTGATCTCTCTCACGCTCTCTGCTGGATGTTCACTGCCTGTCTGTAATTTTTTCTTTCTGCTTGGTGTGTTTCAGCAGCTTGATTTAAGTTTGAAATTTCCAGAACTTTAATCTTGTTGGCAGTCTGAATTGCGTATGAGGATGAAATGTTGCTCCTTTTTCTGGATTAATAGAACATGGTTTGTCAATTTTATGCTCTGTGTAGGTCTAGCATTTCTCCTGGAACCGTGCTAATCGTACTCACTGGAAGGTTTAAGGGGAAGAGAGTTGTGTTCTTGAAGCAGCTTCCATCTGGGTTGCTTTTAGTCACAGGTGAGTCTTAGGAGGATTTTTCTAATTGCCTTCTCTTGTAATTTTTTGCTGTACTTCACATTGTGTTGGGGTTCTCTGAGAAGGAATAATTCAGTATTATGAAGGTTTTTATATCTATTCGTGGTGTGTTAGGTATTTTTCTGATTACACTGTGGATTTTTGCTAGATTTGGATTCGGAATATGTGTCGTCTTTTTGCCAACTTAGCCATCGTCCGTGTCAGTTCCACATATTATCATAATACCAAACCCTTGCGTCTACTCGATACTAGGAGTTTTGGATTTTTGAAGTATAATAGTTTATCATGATAAATATTAAAAATGTCGCATGCCTCTAATTCTTCTGTAACGCTCTGCAAATGATCTTTACATACATTACCCTTATTTTCTTAACTTCATGTGCAATATATTTTACCGTCCTCTTTCTGGTGGGTCTGGTTAGTGGGAGGGGTTGGGATACATGACATGATTCATGTTGTAGTCGTAAATGTCTGGGAGGAAGGATGCATAGAAAGTAGTGATTAGCTAGCTGTCCACCTATTGGGTAACAATTTCAATTTTAGTTTTCTGTTTTTAAGAATCATGCTTGTTTTCTTACTATTTCTTTAGCATGTTTTTCACCTTTCATCTGAACACGTGAATAACAAAATCAGTTTTTAGAAACTACTTCTTTTAGTTTAGATTTTGTAAATGTCTTTAAAAGTTGATATCAAGACAAAAGAAGACATAGGTTGAAGTAGTGACTGTAAGCTTAATTTTCAAAAACAGATAACTAAAAACAAAATTTTATCTGATGAGCTCAAACATTTTTTTATTTTGCAATTCTAGTATATGAAAGGGATTTTCTAAATTTAAAGTTTGTGATTTTAGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTTCAGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGTTTGTTATGGATTGTTATCATCTGTTTTTGTTCTAATACTTGCAGTTTTATTATTTCTGTCCTAATTTTTGGTCACCATTTTTACATCTAGGAAAAGAGTGCACTCCCACAGGAGAAAAAAGATGATCAGAAGGCCGTGGACACAGCTCTGCTAAAGTCAATTGAAGCGGTTTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTC

mRNA sequence

AGGGTTTCGGCGAGGAGAAGAGAGTTCCCAATTCCGAAAAGATCATCAATGGCGCCGAAGACAGCCAAAGTCAGCAGGAACCCCGATCTCATTCGTGGGGTTGGCAAATATTCGAGGTCGAAGATGTACCATAAGCGAGGTCTGTGGGCAATCAAGGCCAAGAACGGAGGTGCCTTCCCTCAACACGATCTCAAGCCTAAGGCCGACGCTCCGGCAGAGAAGCCGCCCAAGTTTTACCCTGCCGACGACGTTAAGAAACCGCTTGTTAACAAGCGCAAGCCTAAGCCCACCAAGCTCAGGTCTAGCATTTCTCCTGGAACCGTGCTAATCGTACTCACTGGAAGGTTTAAGGGGAAGAGAGTTGTGTTCTTGAAGCAGCTTCCATCTGGGTTGCTTTTAGTCACAGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTTCAGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAGAGTGCACTCCCACAGGAGAAAAAAGATGATCAGAAGGCCGTGGACACAGCTCTGCTAAAGTCAATTGAAGCGGTTTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTC

Coding sequence (CDS)

AGGGTTTCGGCGAGGAGAAGAGAGTTCCCAATTCCGAAAAGATCATCAATGGCGCCGAAGACAGCCAAAGTCAGCAGGAACCCCGATCTCATTCGTGGGGTTGGCAAATATTCGAGGTCGAAGATGTACCATAAGCGAGGTCTGTGGGCAATCAAGGCCAAGAACGGAGGTGCCTTCCCTCAACACGATCTCAAGCCTAAGGCCGACGCTCCGGCAGAGAAGCCGCCCAAGTTTTACCCTGCCGACGACGTTAAGAAACCGCTTGTTAACAAGCGCAAGCCTAAGCCCACCAAGCTCAGGTCTAGCATTTCTCCTGGAACCGTGCTAATCGTACTCACTGGAAGGTTTAAGGGGAAGAGAGTTGTGTTCTTGAAGCAGCTTCCATCTGGGTTGCTTTTAGTCACAGGACCATTCAAGGTCAATGGTGTTCCTTTGAGGCGTGTGAATCAGTCATACGTGATTGCAACCTCCACCAAGGTGGACATTTCAGGAGTCAATGTGGAGAAGTTTGATGACAAATATTTCTCCAAGGAAGTTCAGAAGAAGAAAAAGAAGGGAGAAGGAGAATTTTTTGAGGCAGAGAAGGAGGAAAAGAGTGCACTCCCACAGGAGAAAAAAGATGATCAGAAGGCCGTGGACACAGCTCTGCTAAAGTCAATTGAAGCGGTTTCAGACTTAAAGACCTACTTAGCTGCAAGGTTTTCTCTAAAGGCAGGCATGAAACCGCACGAGCTTGTTTTC

Protein sequence

RVSARRREFPIPKRSSMAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF

Homology

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BLAST of MS016125 vs. NCBI nr
Match: XP_022152688.1 (60S ribosomal protein L6-1-like [Momordica charantia])

HSP 1 Score: 443.4 bits (1139), Expect = 1.3e-120
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP
Sbjct: 1   MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

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BLAST of MS016125 vs. NCBI nr
Match: XP_038880885.1 (60S ribosomal protein L6-1-like [Benincasa hispida])

HSP 1 Score: 427.6 bits (1098), Expect = 7.5e-116
Identity = 220/231 (95.24%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTA+VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGG FP+HD KPKADAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKPLVNKRKPKPTKLRSSI+PGTVLI+LTGRFKGKRVVFLKQL SGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLQSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVDI+GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQ+KKDDQKAVD+ALLKSIEAV+DLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVADLKTYLAARFSLKAGMKPHELVF 231

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BLAST of MS016125 vs. NCBI nr
Match: XP_004149609.1 (60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Csa_001784 [Cucumis sativus])

HSP 1 Score: 424.5 bits (1090), Expect = 6.4e-115
Identity = 218/231 (94.37%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTA+VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGG FP+HD KPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKP+VNKRK KPTKLRSSI+PGTVLI+LTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVDI+GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQ+KKDDQKAVD+ALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

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BLAST of MS016125 vs. NCBI nr
Match: XP_004150161.2 (60S ribosomal protein L6-1 [Cucumis sativus] >KAE8649348.1 hypothetical protein Csa_015063 [Cucumis sativus])

HSP 1 Score: 424.1 bits (1089), Expect = 8.3e-115
Identity = 218/231 (94.37%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTA+VSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG FP+HD KPKAD+PAEKPP
Sbjct: 1   MAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKADSPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKPLVNKRKPKPTKLRSSI+PGTVLI+LTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVDI+GVNVEKF DKYFSKEV +KKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVHQKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQEKKDDQKAVD+ALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

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BLAST of MS016125 vs. NCBI nr
Match: XP_022935449.1 (60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal protein L6, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 423.7 bits (1088), Expect = 1.1e-114
Identity = 217/231 (93.94%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTA+VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGG FP+HD +PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKPLVNKRK KPTKLRSSI+PGTVLI+LTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVD++GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQ+KKDDQKAVD+ALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

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BLAST of MS016125 vs. ExPASy Swiss-Prot
Match: Q9FZ76 (60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 3.8e-102
Identity = 187/230 (81.30%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 18  APKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPK 77
           A +T KV+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGG FP+HD +PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 78  FYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGP 137
           FYPA+DVKKPLVN+RKPKPTKL++SI+PGTVLI+L GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 138 FKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 197
           FK+NGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 198 KSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           K  +PQEKK+DQK VD AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

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BLAST of MS016125 vs. ExPASy Swiss-Prot
Match: P34091 (60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 1.2e-100
Identity = 187/224 (83.48%), Postives = 202/224 (90.18%), Query Frame = 0


Query: 24  VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPKFYPADD 83
           VSRNP+L+RG+GKYSRSKMYHKRGLWAIKAKNGG FP+H  K       EKPPKFYPADD
Sbjct: 11  VSRNPELVRGIGKYSRSKMYHKRGLWAIKAKNGGVFPKHAPKSADSKAVEKPPKFYPADD 70

Query: 84  VKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGV 143
           VKKPL+NKRKPKPTKLR+SI+PGTVLI+L GRFKGKRVVFLKQL SGLLLVTGPFKVNGV
Sbjct: 71  VKKPLINKRKPKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGPFKVNGV 130

Query: 144 PLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQ 203
           PLRRVNQ+YVIATSTKVDISGVNVEKFDDKYF K+ +KK KKGEGEFFEAEK+E + LPQ
Sbjct: 131 PLRRVNQAYVIATSTKVDISGVNVEKFDDKYFGKKAEKKNKKGEGEFFEAEKKEVNVLPQ 190

Query: 204 EKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKKDDQKAVD ALLK+IE V +LK YL ARFSLKAGMKPHELVF
Sbjct: 191 EKKDDQKAVDVALLKAIEGVPELKAYLGARFSLKAGMKPHELVF 234

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BLAST of MS016125 vs. ExPASy Swiss-Prot
Match: Q9C9C6 (60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.1e-100
Identity = 186/228 (81.58%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 20  KTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPKFY 79
           +TAKV+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGG FP+HD K K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 80  PADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGPFK 139
           PA+DVKKPL N+R  KP KLR+SI+PGTVLI+L GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 140 VNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 199
           +NGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 200 ALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
            +PQ KKDDQKAVD AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of MS016125 vs. ExPASy Swiss-Prot
Match: Q9C9C5 (60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1)

HSP 1 Score: 366.7 bits (940), Expect = 2.1e-100
Identity = 186/228 (81.58%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 20  KTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPKFY 79
           +T KV+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGG FP+HD K K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 80  PADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGPFK 139
           PA+DVKKPL N+R  KPTKLR+SI+PGTVLI+L GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 140 VNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 199
           +NGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 200 ALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
            +PQ KKDDQKAVD AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of MS016125 vs. ExPASy Swiss-Prot
Match: P47911 (60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3)

HSP 1 Score: 191.0 bits (484), Expect = 1.6e-47
Identity = 125/257 (48.64%), Postives = 162/257 (63.04%), Query Frame = 0


Query: 19  PKTAK--VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKAD------- 78
           PK AK   SRNP L+RG+G+YSRS MY ++ L+  K K   A  + + K K +       
Sbjct: 44  PKKAKPHCSRNPVLVRGIGRYSRSAMYSRKALY--KRKYSAAKTKVEKKKKKEKVLATVT 103

Query: 79  -------------APAEKPPKFYPADDVKKPLVNKRKPKP-----TKLRSSISPGTVLIV 138
                            K P++YP +DV + L++  K KP      +LRSSI+PGTVLI+
Sbjct: 104 KTVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGK-KPFSQHVRRLRSSITPGTVLII 163

Query: 139 LTGRFKGKRVVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDISGVNVEK-F 198
           LTGR +GKRVVFLKQL SGLLLVTGP  +N VPLRR +Q +VIATSTKVDIS V + K  
Sbjct: 164 LTGRHRGKRVVFLKQLDSGLLLVTGPLVINRVPLRRTHQKFVIATSTKVDISDVKIPKHL 223

Query: 199 DDKYFSKEVQKKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYL 248
            D YF K+  +K +  EGE F+ EK EK  + +++K DQKAVD  +L  I+AV  L+ YL
Sbjct: 224 TDAYFKKKQLRKPRHQEGEIFDTEK-EKYEITEQRKADQKAVDLQILPKIKAVPQLQGYL 283

[Close]

BLAST of MS016125 vs. ExPASy TrEMBL
Match: A0A6J1DFI6 (60S ribosomal protein L6 OS=Momordica charantia OX=3673 GN=LOC111020347 PE=3 SV=1)

HSP 1 Score: 443.4 bits (1139), Expect = 6.4e-121
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP
Sbjct: 1   MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of MS016125 vs. ExPASy TrEMBL
Match: A0A0A0KYA4 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 5.1e-118
Identity = 226/247 (91.50%), Postives = 236/247 (95.55%), Query Frame = 0


Query: 1   RVSARRREFPIPKRSSMAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFP 60
           RV  RRR   I + SSMAPKTA+VSRNP+LIRGVGKYSRSKMYHKRGLWAIKAKNGG FP
Sbjct: 38  RVEERRRRCQILRSSSMAPKTARVSRNPELIRGVGKYSRSKMYHKRGLWAIKAKNGGVFP 97

Query: 61  QHDLKPKADAPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKR 120
           +HD KPKAD+PAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSI+PGTVLI+LTGRFKGKR
Sbjct: 98  RHDAKPKADSPAEKPPKFYPADDVKKPLVNKRKPKPTKLRSSITPGTVLIILTGRFKGKR 157

Query: 121 VVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQ 180
           VVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDI+GVNVEKF DKYFSKEV 
Sbjct: 158 VVFLKQLPSGLLLVTGPFKVNGVPLRRVNQSYVIATSTKVDIAGVNVEKFGDKYFSKEVH 217

Query: 181 KKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGM 240
           +KKKKGEGEFFEAEKEEKSALPQEKKDDQKAVD+ALLKSIEAVSDLKTYLAARFSLKAGM
Sbjct: 218 QKKKKGEGEFFEAEKEEKSALPQEKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGM 277

Query: 241 KPHELVF 248
           KPHELVF
Sbjct: 278 KPHELVF 284

[Close]

BLAST of MS016125 vs. ExPASy TrEMBL
Match: A0A0A0L9J7 (60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1)

HSP 1 Score: 424.5 bits (1090), Expect = 3.1e-115
Identity = 218/231 (94.37%), Postives = 228/231 (98.70%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTA+VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGG FP+HD KPKA+APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKAEAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKP+VNKRK KPTKLRSSI+PGTVLI+LTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPIVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVDI+GV+VEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVSVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQ+KKDDQKAVD+ALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of MS016125 vs. ExPASy TrEMBL
Match: A0A6J1F5G0 (60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1)

HSP 1 Score: 423.7 bits (1088), Expect = 5.3e-115
Identity = 217/231 (93.94%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTA+VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGG FP+HD +PK DAPAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAQPKTDAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKPLVNKRK KPTKLRSSI+PGTVLI+LTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRSSITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVD++GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDLAGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQ+KKDDQKAVD+ALLKSIEAVSDLKTYLAARFSLK+GMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKAVDSALLKSIEAVSDLKTYLAARFSLKSGMKPHELVF 231

[Close]

BLAST of MS016125 vs. ExPASy TrEMBL
Match: A0A5D3CKB9 (60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold25G00210 PE=3 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.2e-114
Identity = 217/231 (93.94%), Postives = 226/231 (97.84%), Query Frame = 0


Query: 17  MAPKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPP 76
           MAPKTA+VSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGG FP+HD KPK +APAEKPP
Sbjct: 1   MAPKTARVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGVFPRHDAKPKPEAPAEKPP 60

Query: 77  KFYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTG 136
           KFYPADDVKKPLVNKRK KPTKLR+SI+PGTVLI+LTGRFKGKRVVFLKQLPSGLLLVTG
Sbjct: 61  KFYPADDVKKPLVNKRKAKPTKLRASITPGTVLIILTGRFKGKRVVFLKQLPSGLLLVTG 120

Query: 137 PFKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 196
           PFKVNGVPLRRVNQSYVIATSTKVDI+GVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE
Sbjct: 121 PFKVNGVPLRRVNQSYVIATSTKVDITGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKE 180

Query: 197 EKSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           EKSALPQ+KKDDQK VD+ALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF
Sbjct: 181 EKSALPQDKKDDQKTVDSALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 231

[Close]

BLAST of MS016125 vs. TAIR 10
Match: AT1G18540.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 372.5 bits (955), Expect = 2.7e-103
Identity = 187/230 (81.30%), Postives = 206/230 (89.57%), Query Frame = 0


Query: 18  APKTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPK 77
           A +T KV+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGG FP+HD +PK DAP EKP K
Sbjct: 4   AKRTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAQPKVDAPVEKPAK 63

Query: 78  FYPADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGP 137
           FYPA+DVKKPLVN+RKPKPTKL++SI+PGTVLI+L GRFKGKRVVFLKQL SGLLLVTGP
Sbjct: 64  FYPAEDVKKPLVNRRKPKPTKLKASITPGTVLIILAGRFKGKRVVFLKQLSSGLLLVTGP 123

Query: 138 FKVNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEE 197
           FK+NGVPLRRVNQ+YVI TSTK+DISGVN EKFDDKYF K  +KKKKK EGEFFEAEKEE
Sbjct: 124 FKINGVPLRRVNQAYVIGTSTKIDISGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEE 183

Query: 198 KSALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
           K  +PQEKK+DQK VD AL+KSIEAV +LK YL ARFSL  GMKPHELVF
Sbjct: 184 KKEIPQEKKEDQKTVDAALIKSIEAVPELKVYLGARFSLSQGMKPHELVF 233

[Close]

BLAST of MS016125 vs. TAIR 10
Match: AT1G74050.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-101
Identity = 186/228 (81.58%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 20  KTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPKFY 79
           +T KV+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGG FP+HD K K DAP EKPPKFY
Sbjct: 6   RTPKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 80  PADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGPFK 139
           PA+DVKKPL N+R  KPTKLR+SI+PGTVLI+L GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPTKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 140 VNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 199
           +NGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 200 ALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
            +PQ KKDDQKAVD AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQVKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

[Close]

BLAST of MS016125 vs. TAIR 10
Match: AT1G74060.1 (Ribosomal protein L6 family protein )

HSP 1 Score: 366.7 bits (940), Expect = 1.5e-101
Identity = 186/228 (81.58%), Postives = 204/228 (89.47%), Query Frame = 0


Query: 20  KTAKVSRNPDLIRGVGKYSRSKMYHKRGLWAIKAKNGGAFPQHDLKPKADAPAEKPPKFY 79
           +TAKV+RNPDLIRGVGKYSRS+MYHKRGLWAIKAKNGG FP+HD K K DAP EKPPKFY
Sbjct: 6   RTAKVNRNPDLIRGVGKYSRSQMYHKRGLWAIKAKNGGVFPRHDAKSKVDAPVEKPPKFY 65

Query: 80  PADDVKKPLVNKRKPKPTKLRSSISPGTVLIVLTGRFKGKRVVFLKQLPSGLLLVTGPFK 139
           PA+DVKKPL N+R  KP KLR+SI+PGTVLI+L GRFKGKRVVFLKQL SGLLLVTGPFK
Sbjct: 66  PAEDVKKPLPNRRTAKPAKLRASITPGTVLIILAGRFKGKRVVFLKQLASGLLLVTGPFK 125

Query: 140 VNGVPLRRVNQSYVIATSTKVDISGVNVEKFDDKYFSKEVQKKKKKGEGEFFEAEKEEKS 199
           +NGVPLRRVNQ+YVI TSTKVDISGV ++KFDDKYF K  +KKKKK EGEFFEAEKEEK 
Sbjct: 126 INGVPLRRVNQAYVIGTSTKVDISGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKK 185

Query: 200 ALPQEKKDDQKAVDTALLKSIEAVSDLKTYLAARFSLKAGMKPHELVF 248
            +PQ KKDDQKAVD AL+K+IEAV +LKTYL ARFSLK GMKPHELVF
Sbjct: 186 EIPQGKKDDQKAVDAALIKAIEAVPELKTYLGARFSLKQGMKPHELVF 233

The following BLAST results are available for this feature:

BLAST of MS016125 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152688.1	1.3e-120	100.00	60S ribosomal protein L6-1-like [Momordica charantia]	[more]
XP_038880885.1	7.5e-116	95.24	60S ribosomal protein L6-1-like [Benincasa hispida]	[more]
XP_004149609.1	6.4e-115	94.37	60S ribosomal protein L6-2 [Cucumis sativus] >KGN58615.1 hypothetical protein Cs...	[more]
XP_004150161.2	8.3e-115	94.37	60S ribosomal protein L6-1 [Cucumis sativus] >KAE8649348.1 hypothetical protein ...	[more]
XP_022935449.1	1.1e-114	93.94	60S ribosomal protein L6-1-like [Cucurbita moschata] >KAG6581596.1 60S ribosomal...	[more]

BLAST of MS016125 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FZ76	3.8e-102	81.30	60S ribosomal protein L6-1 OS=Arabidopsis thaliana OX=3702 GN=RPL6A PE=2 SV=1	[more]
P34091	1.2e-100	83.48	60S ribosomal protein L6 OS=Mesembryanthemum crystallinum OX=3544 GN=RPL6 PE=2 S...	[more]
Q9C9C6	2.1e-100	81.58	60S ribosomal protein L6-2 OS=Arabidopsis thaliana OX=3702 GN=RPL6B PE=2 SV=1	[more]
Q9C9C5	2.1e-100	81.58	60S ribosomal protein L6-3 OS=Arabidopsis thaliana OX=3702 GN=RPL6C PE=2 SV=1	[more]
P47911	1.6e-47	48.64	60S ribosomal protein L6 OS=Mus musculus OX=10090 GN=Rpl6 PE=1 SV=3	[more]

BLAST of MS016125 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DFI6	6.4e-121	100.00	60S ribosomal protein L6 OS=Momordica charantia OX=3673 GN=LOC111020347 PE=3 SV=...	[more]
A0A0A0KYA4	5.1e-118	91.50	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_4G153800 PE=3 SV=1	[more]
A0A0A0L9J7	3.1e-115	94.37	60S ribosomal protein L6 OS=Cucumis sativus OX=3659 GN=Csa_3G698560 PE=3 SV=1	[more]
A0A6J1F5G0	5.3e-115	93.94	60S ribosomal protein L6 OS=Cucurbita moschata OX=3662 GN=LOC111442321 PE=3 SV=1	[more]
A0A5D3CKB9	1.2e-114	93.94	60S ribosomal protein L6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]

BLAST of MS016125 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G18540.1	2.7e-103	81.30	Ribosomal protein L6 family protein	[more]
AT1G74050.1	1.5e-101	81.58	Ribosomal protein L6 family protein	[more]
AT1G74060.1	1.5e-101	81.58	Ribosomal protein L6 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014722	Ribosomal protein L2, domain 2	GENE3D	2.30.30.30		coord: 101..185 e-value: 7.0E-17 score: 63.2
IPR005568	Ribosomal protein L6, N-terminal	PFAM	PF03868	Ribosomal_L6e_N	coord: 20..75 e-value: 4.8E-15 score: 55.6
IPR000915	60S ribosomal protein L6E	PFAM	PF01159	Ribosomal_L6e	coord: 140..247 e-value: 3.5E-40 score: 137.0
IPR000915	60S ribosomal protein L6E	PANTHER	PTHR10715	60S RIBOSOMAL PROTEIN L6	coord: 11..247
IPR000915	60S ribosomal protein L6E	PROSITE	PS01170	RIBOSOMAL_L6E	coord: 141..159
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 66..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..100
None	No IPR available	PANTHER	PTHR10715:SF9	60S RIBOSOMAL PROTEIN L6	coord: 11..247
IPR041997	Ribosomal Protein L6, KOW domain	CDD	cd13156	KOW_RPL6	coord: 95..247 e-value: 8.15184E-80 score: 234.75
IPR008991	Translation protein SH3-like domain superfamily	SUPERFAMILY	50104	Translation proteins SH3-like domain	coord: 101..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016125.1	MS016125.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome