MS016102 (gene) Bitter gourd (TR) v1

Overview
NameMS016102
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMyb transcription factor
Locationscaffold9_2: 392532 .. 393573 (-)
RNA-Seq ExpressionMS016102
SyntenyMS016102
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AGGAAAATGAGGAAGCCGGAGGCGGTTCTCGGGAAAGAGAGCGCGGAGAAGAACAAGTACCGGAAGGGCCTGTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGGTATATGGTGAGCAATGGGCAGGGATGCTGGAGTGACATTGCAAGGAATGCTGGTCTTCAGAGATGTGGAAAGAGTTGTCGTCTTCGTTGGATTAATTATCTCAGGCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAAGAGCTCATTGTCCACTTGCATTCCCTTATTGGCAACAGGTCCGCTTGCTCTCACACGTTACTTTTTAGTTTTTACTAATACTTTAATCAATTGAATTACGTCCAGCATTACTGGAGATCCATTATCTCTCTTCACTTCACGAAACCAGACTCTCTCTGGACACATTTTTCTTGAAACCCAATTGAGAGTTTCAAATGGGTTTTTGGGGATACTCATAATGCTTTTAAAGTTTATTGGTTGTATTAAAAATGTCACTAGTCATAGCTTCATTTGGAAAAGGGATCGATAATGTGAAAGGATACGCGTTGTATTTAGTTTACATATTTGGAGAATATAAATTTCGTACGTCGTGTAGAAAATACATGGATTTTTAAGAATTTTACAATAAACATATTGTGTAAACGTTTGCCATGTTTTAAACATGTGGATAATGTGTACAACGTTGCATATAATACAATCGTTTATTCAAATGAAGTTACGATGAAGGATATATATATATATTTTTAAATTACTGACATGTTTTAGGGCATCGTTGTTCTTCAAATGAAGTTATTTGCACCAAGTCTATACATTTGTTTATAACAACATTTGAATCTATTATTTCTTTCGATCTCAAGACTAACCGATCTGTTTTTCTGAAAAAAAATCAAATAGGTGGTCTCAAATTGCATCACGCTTGCCTGGACGAACGGACAACGAAATAAAGAATTTTTGGAACTCTACATTGAAGAAAAGGTTAAAAAACAACATTTCTTCCTCACCCTTCAACAGCCATGAATCATCGGATCCAAGA

mRNA sequence

AGGAAAATGAGGAAGCCGGAGGCGGTTCTCGGGAAAGAGAGCGCGGAGAAGAACAAGTACCGGAAGGGCCTGTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGGTATATGGTGAGCAATGGGCAGGGATGCTGGAGTGACATTGCAAGGAATGCTGGTCTTCAGAGATGTGGAAAGAGTTGTCGTCTTCGTTGGATTAATTATCTCAGGCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAAGAGCTCATTGTCCACTTGCATTCCCTTATTGGCAACAGGTGGTCTCAAATTGCATCACGCTTGCCTGGACGAACGGACAACGAAATAAAGAATTTTTGGAACTCTACATTGAAGAAAAGGTTAAAAAACAACATTTCTTCCTCACCCTTCAACAGCCATGAATCATCGGATCCAAGA

Coding sequence (CDS)

AGGAAAATGAGGAAGCCGGAGGCGGTTCTCGGGAAAGAGAGCGCGGAGAAGAACAAGTACCGGAAGGGCCTGTGGTCGCCGGAGGAGGACGAGAAGCTGATGAGGTATATGGTGAGCAATGGGCAGGGATGCTGGAGTGACATTGCAAGGAATGCTGGTCTTCAGAGATGTGGAAAGAGTTGTCGTCTTCGTTGGATTAATTATCTCAGGCCTGACCTTAAACGTGGAGCTTTCTCTCCTCAAGAAGAAGAGCTCATTGTCCACTTGCATTCCCTTATTGGCAACAGGTGGTCTCAAATTGCATCACGCTTGCCTGGACGAACGGACAACGAAATAAAGAATTTTTGGAACTCTACATTGAAGAAAAGGTTAAAAAACAACATTTCTTCCTCACCCTTCAACAGCCATGAATCATCGGATCCAAGA

Protein sequence

RKMRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKKRLKNNISSSPFNSHESSDPR
Homology
[Close]
BLAST of MS016102 vs. NCBI nr
Match: XP_004149614.1 (transcription factor MYB46 [Cucumis sativus] >XP_031737713.1 transcription factor MYB46 [Cucumis sativus] >KAE8650933.1 hypothetical protein Csa_001273 [Cucumis sativus])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEAVLGKE+AEKNKYRKGLWSPEEDEKLMRYM++NGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAVLGKENAEKNKYRKGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SSSP+N HESSDPR
Sbjct: 121 RLKNNLSSSPYN-HESSDPR 139

[Close]
BLAST of MS016102 vs. NCBI nr
Match: XP_008461794.1 (PREDICTED: transcription factor MYB46-like [Cucumis melo] >KAA0048349.1 transcription factor MYB46-like [Cucumis melo var. makuwa] >TYK01115.1 transcription factor MYB46-like [Cucumis melo var. makuwa])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEAVLGKE+AEKNKYRKGLWSPEEDEKLMRYM++NGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAVLGKENAEKNKYRKGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SSSP+N HESSDPR
Sbjct: 121 RLKNNLSSSPYN-HESSDPR 139

[Close]
BLAST of MS016102 vs. NCBI nr
Match: XP_023525825.1 (transcription factor MYB46-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEA LGKE+ EKNKYRKGLWSPEEDEKLMRYM+SNGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAGLGKENVEKNKYRKGLWSPEEDEKLMRYMLSNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SS+PF++HESSDPR
Sbjct: 121 RLKNNLSSTPFSNHESSDPR 140

[Close]
BLAST of MS016102 vs. NCBI nr
Match: KAG6606876.1 (Transcription factor MYB46, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 280.0 bits (715), Expect = 1.1e-71
Identity = 132/140 (94.29%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEA LGKE+ EKNKYRKGLWSPEEDEKLMRYM+SNGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAGLGKENVEKNKYRKGLWSPEEDEKLMRYMLSNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SS+PF++HESSDPR
Sbjct: 121 RLKNNLSSTPFSNHESSDPR 140

[Close]
BLAST of MS016102 vs. NCBI nr
Match: XP_038905632.1 (transcription factor MYB46-like [Benincasa hispida])

HSP 1 Score: 278.9 bits (712), Expect = 2.5e-71
Identity = 133/140 (95.00%), Postives = 139/140 (99.29%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEAVLGKE+AEKNKYRKGLWSPEEDEKLMRYM++NGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAVLGKENAEKNKYRKGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SSSP+N HE+SDPR
Sbjct: 121 RLKNNLSSSPYN-HETSDPR 139

[Close]
BLAST of MS016102 vs. ExPASy Swiss-Prot
Match: Q9LXV2 (Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-57
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPE  +   + +  K +KGLWSPEED KLM+YM+SNGQGCWSD+A+NAGLQRCGKSCR
Sbjct: 1   MRKPEVAIAASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEE+LI+  HS++GNRWSQIA+RLPGRTDNEIKNFWNST+KK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKK 120

Query: 123 RLK---------NNISSSPFNSHESS 140
           RLK         NN SSSP  + +SS
Sbjct: 121 RLKKMSDTSNLINNSSSSPNTASDSS 146

[Close]
BLAST of MS016102 vs. ExPASy Swiss-Prot
Match: Q9C6U1 (Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1)

HSP 1 Score: 222.2 bits (565), Expect = 3.6e-57
Identity = 111/157 (70.70%), Postives = 127/157 (80.89%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKN----------KYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNA 62
           MRKP+    ++  + N          K RKGLWSP+EDEKL+RYM++NGQGCWSDIARNA
Sbjct: 3   MRKPDITTIRDKGKPNHACGGNNNKPKLRKGLWSPDEDEKLIRYMLTNGQGCWSDIARNA 62

Query: 63  GLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEI 122
           GL RCGKSCRLRWINYLRPDLKRG+FSPQEE+LI HLHS++GNRWSQIA+RLPGRTDNEI
Sbjct: 63  GLLRCGKSCRLRWINYLRPDLKRGSFSPQEEDLIFHLHSILGNRWSQIATRLPGRTDNEI 122

Query: 123 KNFWNSTLKKRLKNNIS------SSPFNSHESS-DPR 143
           KNFWNSTLKKRLKNN +      SSP NS+ +S DPR
Sbjct: 123 KNFWNSTLKKRLKNNSNNNTSSGSSPNNSNSNSLDPR 159

[Close]
BLAST of MS016102 vs. ExPASy Swiss-Prot
Match: Q8VZQ2 (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 8.9e-48
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 0 

Query: 17  KNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRG 76
           K K RKGLWSPEEDEKL+ ++ ++G GCWS + + AGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 77  AFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKKRLK 126
           AFSP+EE LIV LH+++GNRWSQIASRLPGRTDNEIKN WNS++KK+LK
Sbjct: 69  AFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLK 117

[Close]
BLAST of MS016102 vs. ExPASy Swiss-Prot
Match: Q8LPH6 (Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 9.9e-47
Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = 0 

Query: 17  KNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRG 76
           K K RKGLWSPEEDEKL+ Y+  +G GCWS + + AGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 77  AFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKKRLK 126
           AFS  EE LI+ LH+ +GNRWSQIA+RLPGRTDNEIKNFWNS LKK+L+
Sbjct: 69  AFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLR 117

[Close]
BLAST of MS016102 vs. ExPASy Swiss-Prot
Match: P20027 (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3)

HSP 1 Score: 177.6 bits (449), Expect = 1.0e-43
Identity = 79/107 (73.83%), Postives = 90/107 (84.11%), Query Frame = 0 

Query: 19  KYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRGAF 78
           K RKGLWSPEEDEKL  +++ +G GCWS + R A L RCGKSCRLRWINYLRPDLKRG F
Sbjct: 13  KVRKGLWSPEEDEKLYNHIIRHGVGCWSSVPRLAALNRCGKSCRLRWINYLRPDLKRGCF 72

Query: 79  SPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKKRLK 126
           S QEE+ IV LH ++GNRWSQIAS LPGRTDNEIKNFWNS +KK+L+
Sbjct: 73  SQQEEDHIVALHQILGNRWSQIASHLPGRTDNEIKNFWNSCIKKKLR 119

[Close]
BLAST of MS016102 vs. ExPASy TrEMBL
Match: A0A5D3BPM7 (Transcription factor MYB46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00120 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.4e-72
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEAVLGKE+AEKNKYRKGLWSPEEDEKLMRYM++NGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAVLGKENAEKNKYRKGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SSSP+N HESSDPR
Sbjct: 121 RLKNNLSSSPYN-HESSDPR 139

[Close]
BLAST of MS016102 vs. ExPASy TrEMBL
Match: A0A1S3CFJ0 (transcription factor MYB46-like OS=Cucumis melo OX=3656 GN=LOC103500311 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 5.4e-72
Identity = 134/140 (95.71%), Postives = 139/140 (99.29%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEAVLGKE+AEKNKYRKGLWSPEEDEKLMRYM++NGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAVLGKENAEKNKYRKGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SSSP+N HESSDPR
Sbjct: 121 RLKNNLSSSPYN-HESSDPR 139

[Close]
BLAST of MS016102 vs. ExPASy TrEMBL
Match: A0A6J1GC35 (transcription factor MYB46-like OS=Cucurbita moschata OX=3662 GN=LOC111452781 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.1e-71
Identity = 131/140 (93.57%), Postives = 138/140 (98.57%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEA LGKE+ EKNKYRKGLWSPEEDEKLMRYM+S+GQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAGLGKENVEKNKYRKGLWSPEEDEKLMRYMLSDGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SS+PF++HESSDPR
Sbjct: 121 RLKNNLSSTPFSNHESSDPR 140

[Close]
BLAST of MS016102 vs. ExPASy TrEMBL
Match: A0A6J1KCL7 (transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111493095 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70
Identity = 130/140 (92.86%), Postives = 136/140 (97.14%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPEA LGKE+ EKNKYRKGLWSPEEDEKLMRYM+SNGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEAGLGKENVEKNKYRKGLWSPEEDEKLMRYMLSNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SS+PF++HE  DPR
Sbjct: 121 RLKNNLSSTPFSNHEPLDPR 140

[Close]
BLAST of MS016102 vs. ExPASy TrEMBL
Match: A0A6J1J9A9 (transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111482449 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.3e-70
Identity = 132/140 (94.29%), Postives = 137/140 (97.86%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPE V GKE+AEKNKYRKGLWSPEEDEKLMRYM++NGQGCWSDIARNAGLQRCGKSCR
Sbjct: 1   MRKPEVVPGKENAEKNKYRKGLWSPEEDEKLMRYMLNNGQGCWSDIARNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 120

Query: 123 RLKNNISSSPFNSHESSDPR 143
           RLKNN+SSSP+ SHESSDPR
Sbjct: 121 RLKNNLSSSPY-SHESSDPR 139

[Close]
BLAST of MS016102 vs. TAIR 10
Match: AT5G12870.1 (myb domain protein 46 )

HSP 1 Score: 223.0 bits (567), Expect = 1.5e-58
Identity = 105/146 (71.92%), Postives = 121/146 (82.88%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCR 62
           MRKPE  +   + +  K +KGLWSPEED KLM+YM+SNGQGCWSD+A+NAGLQRCGKSCR
Sbjct: 1   MRKPEVAIAASTHQVKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCR 60

Query: 63  LRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKK 122
           LRWINYLRPDLKRGAFSPQEE+LI+  HS++GNRWSQIA+RLPGRTDNEIKNFWNST+KK
Sbjct: 61  LRWINYLRPDLKRGAFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKK 120

Query: 123 RLK---------NNISSSPFNSHESS 140
           RLK         NN SSSP  + +SS
Sbjct: 121 RLKKMSDTSNLINNSSSSPNTASDSS 146

[Close]
BLAST of MS016102 vs. TAIR 10
Match: AT3G08500.1 (myb domain protein 83 )

HSP 1 Score: 222.2 bits (565), Expect = 2.6e-58
Identity = 111/157 (70.70%), Postives = 127/157 (80.89%), Query Frame = 0 

Query: 3   MRKPEAVLGKESAEKN----------KYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNA 62
           MRKP+    ++  + N          K RKGLWSP+EDEKL+RYM++NGQGCWSDIARNA
Sbjct: 3   MRKPDITTIRDKGKPNHACGGNNNKPKLRKGLWSPDEDEKLIRYMLTNGQGCWSDIARNA 62

Query: 63  GLQRCGKSCRLRWINYLRPDLKRGAFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEI 122
           GL RCGKSCRLRWINYLRPDLKRG+FSPQEE+LI HLHS++GNRWSQIA+RLPGRTDNEI
Sbjct: 63  GLLRCGKSCRLRWINYLRPDLKRGSFSPQEEDLIFHLHSILGNRWSQIATRLPGRTDNEI 122

Query: 123 KNFWNSTLKKRLKNNIS------SSPFNSHESS-DPR 143
           KNFWNSTLKKRLKNN +      SSP NS+ +S DPR
Sbjct: 123 KNFWNSTLKKRLKNNSNNNTSSGSSPNNSNSNSLDPR 159

[Close]
BLAST of MS016102 vs. TAIR 10
Match: AT1G09540.1 (myb domain protein 61 )

HSP 1 Score: 191.0 bits (484), Expect = 6.4e-49
Identity = 84/109 (77.06%), Postives = 98/109 (89.91%), Query Frame = 0 

Query: 17  KNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRG 76
           K K RKGLWSPEEDEKL+ ++ ++G GCWS + + AGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLTHITNHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 77  AFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKKRLK 126
           AFSP+EE LIV LH+++GNRWSQIASRLPGRTDNEIKN WNS++KK+LK
Sbjct: 69  AFSPEEENLIVELHAVLGNRWSQIASRLPGRTDNEIKNLWNSSIKKKLK 117

[Close]
BLAST of MS016102 vs. TAIR 10
Match: AT5G26660.1 (myb domain protein 86 )

HSP 1 Score: 187.6 bits (475), Expect = 7.0e-48
Identity = 83/109 (76.15%), Postives = 94/109 (86.24%), Query Frame = 0 

Query: 17  KNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRG 76
           K K RKGLWSPEEDEKL+ Y+  +G GCWS + + AGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLNYITRHGHGCWSSVPKLAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 77  AFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKKRLK 126
           AFS  EE LI+ LH+ +GNRWSQIA+RLPGRTDNEIKNFWNS LKK+L+
Sbjct: 69  AFSQDEESLIIELHAALGNRWSQIATRLPGRTDNEIKNFWNSCLKKKLR 117

[Close]
BLAST of MS016102 vs. TAIR 10
Match: AT4G01680.1 (myb domain protein 55 )

HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47
Identity = 82/109 (75.23%), Postives = 94/109 (86.24%), Query Frame = 0 

Query: 17  KNKYRKGLWSPEEDEKLMRYMVSNGQGCWSDIARNAGLQRCGKSCRLRWINYLRPDLKRG 76
           K K RKGLWSPEEDEKL+RY+   G GCWS + + AGLQRCGKSCRLRWINYLRPDLKRG
Sbjct: 9   KQKLRKGLWSPEEDEKLLRYITKYGHGCWSSVPKQAGLQRCGKSCRLRWINYLRPDLKRG 68

Query: 77  AFSPQEEELIVHLHSLIGNRWSQIASRLPGRTDNEIKNFWNSTLKKRLK 126
           AFS  EE LI+ LH+++GNRWSQIA++LPGRTDNEIKN WNS LKK+L+
Sbjct: 69  AFSQDEENLIIELHAVLGNRWSQIAAQLPGRTDNEIKNLWNSCLKKKLR 117

The following BLAST results are available for this feature:
BLAST of MS016102 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004149614.11.1e-7195.71transcription factor MYB46 [Cucumis sativus] >XP_031737713.1 transcription facto... [more]
XP_008461794.11.1e-7195.71PREDICTED: transcription factor MYB46-like [Cucumis melo] >KAA0048349.1 transcri... [more]
XP_023525825.11.1e-7194.29transcription factor MYB46-like [Cucurbita pepo subsp. pepo][more]
KAG6606876.11.1e-7194.29Transcription factor MYB46, partial [Cucurbita argyrosperma subsp. sororia][more]
XP_038905632.12.5e-7195.00transcription factor MYB46-like [Benincasa hispida][more]
BLAST of MS016102 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LXV22.1e-5771.92Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1[more]
Q9C6U13.6e-5770.70Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1[more]
Q8VZQ28.9e-4877.06Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1[more]
Q8LPH69.9e-4776.15Transcription factor MYB86 OS=Arabidopsis thaliana OX=3702 GN=MYB86 PE=2 SV=1[more]
P200271.0e-4373.83Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3[more]
BLAST of MS016102 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5D3BPM75.4e-7295.71Transcription factor MYB46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... [more]
A0A1S3CFJ05.4e-7295.71transcription factor MYB46-like OS=Cucumis melo OX=3656 GN=LOC103500311 PE=4 SV=... [more]
A0A6J1GC352.1e-7193.57transcription factor MYB46-like OS=Cucurbita moschata OX=3662 GN=LOC111452781 PE... [more]
A0A6J1KCL71.0e-7092.86transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111493095 PE=4... [more]
A0A6J1J9A91.3e-7094.29transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111482449 PE=4... [more]
BLAST of MS016102 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G12870.11.5e-5871.92myb domain protein 46 [more]
AT3G08500.12.6e-5870.70myb domain protein 83 [more]
AT1G09540.16.4e-4977.06myb domain protein 61 [more]
AT5G26660.17.0e-4876.15myb domain protein 86 [more]
AT4G01680.11.2e-4775.23myb domain protein 55 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 74..122
e-value: 1.3E-15
score: 67.9
coord: 21..71
e-value: 2.0E-11
score: 54.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 17..69
score: 11.149312
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 70..120
score: 10.394506
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 77..120
e-value: 6.13859E-10
score: 49.4962
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 25..69
e-value: 3.96688E-9
score: 47.5702
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 75..119
e-value: 2.0E-14
score: 53.5
coord: 22..69
e-value: 3.7E-13
score: 49.4
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 17..69
score: 18.723366
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 70..124
score: 25.058878
NoneNo IPR availableGENE3D1.10.10.60coord: 22..74
e-value: 4.4E-19
score: 70.2
NoneNo IPR availableGENE3D1.10.10.60coord: 76..142
e-value: 1.2E-22
score: 81.7
NoneNo IPR availablePANTHERPTHR47997MYB DOMAIN PROTEIN 55coord: 3..138
NoneNo IPR availablePANTHERPTHR47997:SF44TRANSCRIPTION FACTOR MYB46coord: 3..138
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 20..116

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS016102.1MS016102.1mRNA