Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTTTGGAGGTTTAATGTCGATGCAAGAACACGACATCGTGAGCATGAACATGAGCATGGATTCATCGTCCACCTCCTCGTCATCTTCCCAACTTCCAGTGTCCATCACAGGACACAACTCCTTCGATGCTCCAACCATGCCTTTCCTAGACAACAACTTCGAAATGGCCGGGGCTGCCAACGGCTTTCTGCAGGCACCGGGAGGGCGCTTGGCAGAAGTCGGAATGGGAATGGAAATGAGGATGGAAGAGAGATTCAGCTATGGAAGTTTGGAGGCTCAAAGATCAATGGAAATGGAAAGGGATGTGGCATGTCTTCCACATGAAGAGATGAACTATCCATTAATGAATAGTAGAGGCAATTTTGATCAATATTTGGGAACAAATGAGCAAAATTTGAATGTGGAGGAGATTTTTGGAGACATGGGAAGCCATGGACAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGATTTGGAGAGTTTCATGCAAGACATACCCTCATTCCCTCATTTCCTT
mRNA sequence
ATGATGTTTGGAGGTTTAATGTCGATGCAAGAACACGACATCGTGAGCATGAACATGAGCATGGATTCATCGTCCACCTCCTCGTCATCTTCCCAACTTCCAGTGTCCATCACAGGACACAACTCCTTCGATGCTCCAACCATGCCTTTCCTAGACAACAACTTCGAAATGGCCGGGGCTGCCAACGGCTTTCTGCAGGCACCGGGAGGGCGCTTGGCAGAAGTCGGAATGGGAATGGAAATGAGGATGGAAGAGAGATTCAGCTATGGAAGTTTGGAGGCTCAAAGATCAATGGAAATGGAAAGGGATGTGGCATGTCTTCCACATGAAGAGATGAACTATCCATTAATGAATAGTAGAGGCAATTTTGATCAATATTTGGGAACAAATGAGCAAAATTTGAATGTGGAGGAGATTTTTGGAGACATGGGAAGCCATGGACAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGATTTGGAGAGTTTCATGCAAGACATACCCTCATTCCCTCATTTCCTT
Coding sequence (CDS)
ATGATGTTTGGAGGTTTAATGTCGATGCAAGAACACGACATCGTGAGCATGAACATGAGCATGGATTCATCGTCCACCTCCTCGTCATCTTCCCAACTTCCAGTGTCCATCACAGGACACAACTCCTTCGATGCTCCAACCATGCCTTTCCTAGACAACAACTTCGAAATGGCCGGGGCTGCCAACGGCTTTCTGCAGGCACCGGGAGGGCGCTTGGCAGAAGTCGGAATGGGAATGGAAATGAGGATGGAAGAGAGATTCAGCTATGGAAGTTTGGAGGCTCAAAGATCAATGGAAATGGAAAGGGATGTGGCATGTCTTCCACATGAAGAGATGAACTATCCATTAATGAATAGTAGAGGCAATTTTGATCAATATTTGGGAACAAATGAGCAAAATTTGAATGTGGAGGAGATTTTTGGAGACATGGGAAGCCATGGACAATTACAAGAAAGCTTGAAGATGGGTAATGAATGGGATTTGGAGAGTTTCATGCAAGACATACCCTCATTCCCTCATTTCCTT
Protein sequence
MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNYPLMNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL
Homology
BLAST of MS016101 vs. NCBI nr
Match:
XP_022152697.1 (transcription factor MYB83-like, partial [Momordica charantia])
HSP 1 Score: 340.1 bits (871), Expect = 1.1e-89
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGA 60
MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE+AGA
Sbjct: 100 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFELAGA 159
Query: 61 ANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNYPLMNSR 120
ANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMN PLMNSR
Sbjct: 160 ANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNCPLMNSR 219
Query: 121 GNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL 176
GNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFP+FL
Sbjct: 220 GNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPNFL 274
BLAST of MS016101 vs. NCBI nr
Match:
XP_004149614.1 (transcription factor MYB46 [Cucumis sativus] >XP_031737713.1 transcription factor MYB46 [Cucumis sativus] >KAE8650933.1 hypothetical protein Csa_001273 [Cucumis sativus])
HSP 1 Score: 274.2 bits (700), Expect = 7.5e-70
Identity = 145/179 (81.01%), Postives = 158/179 (88.27%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---M 60
MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD +MPFLDN+FE M
Sbjct: 142 MMFGGIMAMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSFDGSSMPFLDNHFEMASM 201
Query: 61 AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNY-PL 120
AG NGFLQAP L E+GMGM MEERF YGSLEAQRSME+ER+V C+PHEEMN+ PL
Sbjct: 202 AGNTNGFLQAP---LTEMGMGMR-SMEERFRYGSLEAQRSMELEREVLCVPHEEMNHPPL 261
Query: 121 MNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL 176
MN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Sbjct: 262 MNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQDISSFPHFL 316
BLAST of MS016101 vs. NCBI nr
Match:
XP_008461794.1 (PREDICTED: transcription factor MYB46-like [Cucumis melo] >KAA0048349.1 transcription factor MYB46-like [Cucumis melo var. makuwa] >TYK01115.1 transcription factor MYB46-like [Cucumis melo var. makuwa])
HSP 1 Score: 272.7 bits (696), Expect = 2.2e-69
Identity = 147/180 (81.67%), Postives = 159/180 (88.33%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---M 60
MMFGG+MSMQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD +MPFLDN+FE M
Sbjct: 142 MMFGGIMSMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSFDGSSMPFLDNHFEMASM 201
Query: 61 AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNY-PL 120
AG NGFLQAP L E+GMG MRMEERF YGSLEAQRSME+ER+V C+PHEEMN+ PL
Sbjct: 202 AGNTNGFLQAP---LTEMGMG--MRMEERFRYGSLEAQRSMELEREVLCVPHEEMNHPPL 261
Query: 121 MNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL 176
MN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Sbjct: 262 MNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQDISSSFPHFL 316
BLAST of MS016101 vs. NCBI nr
Match:
XP_038905632.1 (transcription factor MYB46-like [Benincasa hispida])
HSP 1 Score: 270.8 bits (691), Expect = 8.3e-69
Identity = 146/180 (81.11%), Postives = 157/180 (87.22%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEM--- 60
MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD +MPFLDNNFEM
Sbjct: 142 MMFGGIMAMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSFDGSSMPFLDNNFEMASV 201
Query: 61 AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEE-MNYPL 120
AGA NGFLQ P +GMGM MRMEERFSYG+LE QRSME+ER+V CLPHEE MN PL
Sbjct: 202 AGANNGFLQ-PSLTEMGMGMGMGMRMEERFSYGNLEGQRSMELEREVLCLPHEEMMNPPL 261
Query: 121 M-NSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL 176
M N+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Sbjct: 262 MNNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQDISSFPHFL 320
BLAST of MS016101 vs. NCBI nr
Match:
XP_023525825.1 (transcription factor MYB46-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 268.9 bits (686), Expect = 3.2e-68
Identity = 141/178 (79.21%), Postives = 154/178 (86.52%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMA-- 60
MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD ++PFLDNNFEMA
Sbjct: 143 MMFGGIMAMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSFDGSSIPFLDNNFEMASM 202
Query: 61 -GAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNYPLM 120
GA NGFLQAPGG E MGM M MEER SYGSLEAQRSME+ER+V CLPHEE M
Sbjct: 203 VGATNGFLQAPGGCATE--MGMRMIMEERLSYGSLEAQRSMELEREVLCLPHEE-----M 262
Query: 121 NSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL 176
N+R NFD+YLGTN+QNLNVEE+FGDMGSHGQ+QESLKMGNEWD+ESFMQDI SFPHFL
Sbjct: 263 NNRSNFDEYLGTNDQNLNVEEMFGDMGSHGQVQESLKMGNEWDVESFMQDISSFPHFL 313
BLAST of MS016101 vs. ExPASy TrEMBL
Match:
A0A6J1DGZ7 (transcription factor MYB83-like OS=Momordica charantia OX=3673 GN=LOC111020354 PE=4 SV=1)
HSP 1 Score: 340.1 bits (871), Expect = 5.4e-90
Identity = 172/175 (98.29%), Postives = 174/175 (99.43%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMAGA 60
MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE+AGA
Sbjct: 100 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFELAGA 159
Query: 61 ANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNYPLMNSR 120
ANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMN PLMNSR
Sbjct: 160 ANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNCPLMNSR 219
Query: 121 GNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL 176
GNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFP+FL
Sbjct: 220 GNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPNFL 274
BLAST of MS016101 vs. ExPASy TrEMBL
Match:
A0A0A0L9U4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696880 PE=4 SV=1)
HSP 1 Score: 274.2 bits (700), Expect = 3.7e-70
Identity = 145/179 (81.01%), Postives = 158/179 (88.27%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---M 60
MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD +MPFLDN+FE M
Sbjct: 1 MMFGGIMAMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSFDGSSMPFLDNHFEMASM 60
Query: 61 AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNY-PL 120
AG NGFLQAP L E+GMGM MEERF YGSLEAQRSME+ER+V C+PHEEMN+ PL
Sbjct: 61 AGNTNGFLQAP---LTEMGMGMR-SMEERFRYGSLEAQRSMELEREVLCVPHEEMNHPPL 120
Query: 121 MNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL 176
MN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Sbjct: 121 MNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQDISSFPHFL 175
BLAST of MS016101 vs. ExPASy TrEMBL
Match:
A0A5D3BPM7 (Transcription factor MYB46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold612G00120 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 147/180 (81.67%), Postives = 159/180 (88.33%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---M 60
MMFGG+MSMQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD +MPFLDN+FE M
Sbjct: 142 MMFGGIMSMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSFDGSSMPFLDNHFEMASM 201
Query: 61 AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNY-PL 120
AG NGFLQAP L E+GMG MRMEERF YGSLEAQRSME+ER+V C+PHEEMN+ PL
Sbjct: 202 AGNTNGFLQAP---LTEMGMG--MRMEERFRYGSLEAQRSMELEREVLCVPHEEMNHPPL 261
Query: 121 MNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL 176
MN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Sbjct: 262 MNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQDISSSFPHFL 316
BLAST of MS016101 vs. ExPASy TrEMBL
Match:
A0A1S3CFJ0 (transcription factor MYB46-like OS=Cucumis melo OX=3656 GN=LOC103500311 PE=4 SV=1)
HSP 1 Score: 272.7 bits (696), Expect = 1.1e-69
Identity = 147/180 (81.67%), Postives = 159/180 (88.33%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFE---M 60
MMFGG+MSMQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNSFD +MPFLDN+FE M
Sbjct: 142 MMFGGIMSMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSFDGSSMPFLDNHFEMASM 201
Query: 61 AGAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNY-PL 120
AG NGFLQAP L E+GMG MRMEERF YGSLEAQRSME+ER+V C+PHEEMN+ PL
Sbjct: 202 AGNTNGFLQAP---LTEMGMG--MRMEERFRYGSLEAQRSMELEREVLCVPHEEMNHPPL 261
Query: 121 MNSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDI-PSFPHFL 176
MN+R +FDQYLGTNEQNLNVEE+FGDMGSHGQLQESLKMGNEWDLESFMQDI SFPHFL
Sbjct: 262 MNNRSSFDQYLGTNEQNLNVEEMFGDMGSHGQLQESLKMGNEWDLESFMQDISSSFPHFL 316
BLAST of MS016101 vs. ExPASy TrEMBL
Match:
A0A6J1KCL7 (transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111493095 PE=4 SV=1)
HSP 1 Score: 265.0 bits (676), Expect = 2.2e-67
Identity = 140/178 (78.65%), Postives = 152/178 (85.39%), Query Frame = 0
Query: 1 MMFGGLMSMQEHDIVSMNMSMDSSSTSSSSSQLPVSITGHNSFDAPTMPFLDNNFEMA-- 60
MMFGG+M+MQEHDI+SMNMSMDSSSTSSSSSQLP S TGHNS D +MPFLDNNFEMA
Sbjct: 143 MMFGGIMAMQEHDIMSMNMSMDSSSTSSSSSQLPFSATGHNSLDGSSMPFLDNNFEMASM 202
Query: 61 -GAANGFLQAPGGRLAEVGMGMEMRMEERFSYGSLEAQRSMEMERDVACLPHEEMNYPLM 120
GA NGFLQAPGG E MGM M ME+R SYGSLEAQRSME+ER+V CLPHEE M
Sbjct: 203 VGATNGFLQAPGGCATE--MGMRMIMEQRLSYGSLEAQRSMELEREVLCLPHEE-----M 262
Query: 121 NSRGNFDQYLGTNEQNLNVEEIFGDMGSHGQLQESLKMGNEWDLESFMQDIPSFPHFL 176
N+R NFD+YLGTNEQNLN+EE+FGDM SHGQ+QESLKMGNEWDLESFMQDI SFPHFL
Sbjct: 263 NNRSNFDEYLGTNEQNLNMEEMFGDMESHGQVQESLKMGNEWDLESFMQDISSFPHFL 313
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022152697.1 | 1.1e-89 | 98.29 | transcription factor MYB83-like, partial [Momordica charantia] | [more] |
| XP_004149614.1 | 7.5e-70 | 81.01 | transcription factor MYB46 [Cucumis sativus] >XP_031737713.1 transcription facto... | [more] |
| XP_008461794.1 | 2.2e-69 | 81.67 | PREDICTED: transcription factor MYB46-like [Cucumis melo] >KAA0048349.1 transcri... | [more] |
| XP_038905632.1 | 8.3e-69 | 81.11 | transcription factor MYB46-like [Benincasa hispida] | [more] |
| XP_023525825.1 | 3.2e-68 | 79.21 | transcription factor MYB46-like [Cucurbita pepo subsp. pepo] | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A6J1DGZ7 | 5.4e-90 | 98.29 | transcription factor MYB83-like OS=Momordica charantia OX=3673 GN=LOC111020354 P... | [more] |
| A0A0A0L9U4 | 3.7e-70 | 81.01 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G696880 PE=4 SV=1 | [more] |
| A0A5D3BPM7 | 1.1e-69 | 81.67 | Transcription factor MYB46-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_... | [more] |
| A0A1S3CFJ0 | 1.1e-69 | 81.67 | transcription factor MYB46-like OS=Cucumis melo OX=3656 GN=LOC103500311 PE=4 SV=... | [more] |
| A0A6J1KCL7 | 2.2e-67 | 78.65 | transcription factor MYB46-like OS=Cucurbita maxima OX=3661 GN=LOC111493095 PE=4... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
