MS016095 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACCATCAGCATGACCTCTGCAATGCTTGGCATTTCAGCCCGTCCTAACCAGCATCCGTTGAGTTCCCACCGGAGATTAGTTGTCGTAAATGCTACTGAAGCTTCTCAAGGGGAAAAGACGAAGGTCAATTTTGTCGTCGAGAAAGATTGCAGCAAAGGCAGAAGAGATTTGATGTTTGCTGCAGCAGCAGCTGCTGTTTGTGCCATTACCGGAGTTGCTGCGGCGGAGCCAAAGCCGGGGAGTCCAGAGGCGAGGAAATTCTATGCCCCTGTTTGTGTGACCAATCCAACTGCCAAGATCTGTCGCAAA ATGGCTACCATCAGCATGACCTCTGCAATGCTTGGCATTTCAGCCCGTCCTAACCAGCATCCGTTGAGTTCCCACCGGAGATTAGTTGTCGTAAATGCTACTGAAGCTTCTCAAGGGGAAAAGACGAAGGTCAATTTTGTCGTCGAGAAAGATTGCAGCAAAGGCAGAAGAGATTTGATGTTTGCTGCAGCAGCAGCTGCTGTTTGTGCCATTACCGGAGTTGCTGCGGCGGAGCCAAAGCCGGGGAGTCCAGAGGCGAGGAAATTCTATGCCCCTGTTTGTGTGACCAATCCAACTGCCAAGATCTGTCGCAAA ATGGCTACCATCAGCATGACCTCTGCAATGCTTGGCATTTCAGCCCGTCCTAACCAGCATCCGTTGAGTTCCCACCGGAGATTAGTTGTCGTAAATGCTACTGAAGCTTCTCAAGGGGAAAAGACGAAGGTCAATTTTGTCGTCGAGAAAGATTGCAGCAAAGGCAGAAGAGATTTGATGTTTGCTGCAGCAGCAGCTGCTGTTTGTGCCATTACCGGAGTTGCTGCGGCGGAGCCAAAGCCGGGGAGTCCAGAGGCGAGGAAATTCTATGCCCCTGTTTGTGTGACCAATCCAACTGCCAAGATCTGTCGCAAA MATISMTSAMLGISARPNQHPLSSHRRLVVVNATEASQGEKTKVNFVVEKDCSKGRRDLMFAAAAAAVCAITGVAAAEPKPGSPEARKFYAPVCVTNPTAKICRK Homology
BLAST of MS016095 vs. NCBI nr
Match: XP_022152600.1 (photosystem II 5 kDa protein, chloroplastic-like [Momordica charantia]) HSP 1 Score: 193.0 bits (489), Expect = 1.3e-45 Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of MS016095 vs. NCBI nr
Match: TKY67985.1 (Photosystem II 5 kDa protein [Spatholobus suberectus]) HSP 1 Score: 120.9 bits (302), Expect = 6.4e-24 Identity = 63/106 (59.43%), Postives = 82/106 (77.36%), Query Frame = 0
BLAST of MS016095 vs. NCBI nr
Match: XP_017431408.1 (PREDICTED: photosystem II 5 kDa protein, chloroplastic [Vigna angularis] >KOM51258.1 hypothetical protein LR48_Vigan08g208500 [Vigna angularis]) HSP 1 Score: 118.2 bits (295), Expect = 4.2e-23 Identity = 60/106 (56.60%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of MS016095 vs. NCBI nr
Match: XP_014494186.1 (photosystem II 5 kDa protein, chloroplastic-like [Vigna radiata var. radiata]) HSP 1 Score: 117.5 bits (293), Expect = 7.1e-23 Identity = 59/106 (55.66%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MS016095 vs. NCBI nr
Match: XP_015881637.1 (photosystem II 5 kDa protein, chloroplastic-like [Ziziphus jujuba]) HSP 1 Score: 117.1 bits (292), Expect = 9.3e-23 Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of MS016095 vs. ExPASy Swiss-Prot
Match: P31336 (Photosystem II 5 kDa protein, chloroplastic OS=Gossypium hirsutum OX=3635 GN=PSBT PE=4 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 1.5e-20 Identity = 53/104 (50.96%), Postives = 74/104 (71.15%), Query Frame = 0
BLAST of MS016095 vs. ExPASy Swiss-Prot
Match: B3EWI4 (Photosystem II 5 kDa protein, chloroplastic OS=Petunia hybrida OX=4102 PE=1 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 2.8e-14 Identity = 51/107 (47.66%), Postives = 70/107 (65.42%), Query Frame = 0
BLAST of MS016095 vs. ExPASy Swiss-Prot
Match: Q39195 (Photosystem II 5 kDa protein, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PSBT PE=3 SV=2) HSP 1 Score: 67.8 bits (164), Expect = 8.4e-11 Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = 0
BLAST of MS016095 vs. ExPASy TrEMBL
Match: A0A6J1DEE2 (photosystem II 5 kDa protein, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111020286 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 6.4e-46 Identity = 102/105 (97.14%), Postives = 103/105 (98.10%), Query Frame = 0
BLAST of MS016095 vs. ExPASy TrEMBL
Match: A0A2N9GPB8 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29141 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 6.3e-25 Identity = 64/106 (60.38%), Postives = 83/106 (78.30%), Query Frame = 0
BLAST of MS016095 vs. ExPASy TrEMBL
Match: A0A0L9V8D5 (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g208500 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.0e-23 Identity = 60/106 (56.60%), Postives = 85/106 (80.19%), Query Frame = 0
BLAST of MS016095 vs. ExPASy TrEMBL
Match: A0A1S3TKA3 (photosystem II 5 kDa protein, chloroplastic-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106756317 PE=4 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 3.4e-23 Identity = 59/106 (55.66%), Postives = 86/106 (81.13%), Query Frame = 0
BLAST of MS016095 vs. ExPASy TrEMBL
Match: A0A6P4A783 (photosystem II 5 kDa protein, chloroplastic-like OS=Ziziphus jujuba OX=326968 GN=LOC107417542 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 4.5e-23 Identity = 57/105 (54.29%), Postives = 79/105 (75.24%), Query Frame = 0
BLAST of MS016095 vs. TAIR 10
Match: AT1G51400.1 (Photosystem II 5 kD protein ) HSP 1 Score: 73.9 bits (180), Expect = 8.4e-14 Identity = 51/107 (47.66%), Postives = 67/107 (62.62%), Query Frame = 0
BLAST of MS016095 vs. TAIR 10
Match: AT3G21055.1 (photosystem II subunit T ) HSP 1 Score: 67.8 bits (164), Expect = 6.0e-12 Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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