MS016063 (gene) Bitter gourd (TR) v1

Overview


Name	MS016063
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Cytoplasmic tRNA 2-thiolation protein 1
Location	scaffold9_2: 79265 .. 83870 (-)
RNA-Seq Expression	MS016063
Synteny	MS016063

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGAAGGCGGCGCCAGAGCCAAGAAGGGCGTCTCTTCCCTTTGCTGCATCTGTAACAACAGAAAACCTTCCCTCAAGAGGCCAAAAACCCTGCAACAGGTTAAATTTCCTTCCCCGATGCCGATTCCTTCTTACCATTGAAGAACCAGCGATTCTAATTTCTGTTCATGTAAATTATACACGCTTTCCTTGTTAGTTATAAGTAGCCTGGTTAATTGTCGAGATACTCTGTCAATTCTACCATTCATTTTTCTAAGTAGTTTCAGATGCTGTGATAGGAGATACAACCTTTGTGTATTTCTGATTTCTTGTTTATCTGTTTATTTACTGGGTTTGTTAAGATGCAAATTTGATGTCGAGGGCAGAATTCATTATTTTCTCTGCTTCAGTCTGTCTAGAGGAGAAGAATGCGACCTAACTGTCATTTTAGAAAGGCTAACTGAGATGGGCTTAAGTAGATTACAAGGAGGATATATCCTATATGACCATGTGTATTGCTTTTACAGATATGCAGAGAATGTTTCTATGAGGTATTTGAGGAGGAGATCCATCAAGTTATTGTGAAGAATCACTTGTTCAAACCTGGGGAACGAATTGCTGTTGGTGCATCTGGTGGAAAAGGTGGACACAGATTCTTCATAGTTCTAAATCATTTGTAGTCTTTAAGATTATGTGAAAAACTACTGGCGTGTAAATTATATCCTCTCATACAATACAGGAGAGATGAATTTTGAAGAAGAGAATTATTTTTTGGTTTAAGCACCATCCTTGTTCTTTTAGAAATTAGTTACATTATTTCTTTTACTACTAAAATGGATAGACTCCTGAAATTTTAGAACATGTTTACTGAGATGGTTTGTGAATATATTACTTTCGTTTATTAATGTTAGAAGTTGTGGCTTCTTCGTTCTAAAAAATTATTGGTTATATTTAGTATGGAAGTTTTTTCAGTCATGAAGGATTTGTATCTCACTTTGAACAGAAATTGAGTGGCAACAATTTGATCTACTGTGATTCAGAGTCTAACTTTTACCATGTTTTGACTTAACCTTTCCCCTTTCTTGTGGGAAGGAGGAATTTGAGGGGAGGGGGATGGGAAATTCAGAACCTGTCCTTATTTTATTTACTCTTCCCACTTTATGCAGATTCTACCGTTCTTGCTTATGTGTTATCAGAATTGAATCGGCGGCACAATTACGGGCTTGATCTCTTTCTTTTATCAGTTGATGAGGGCATCACTGGATACAGAGATGACTCTCTTGAAACTGTGAAAAGAAATGAAATTCAGGTGAAGAATCCTTCTTGACTTCCTTTTGATTGATTCTCCCCTTTCCTTGCTTCTAGAAATGTTTGAGTCTCACTATTACTAAATTGGGAATATTGCAGATCATTTCTAGATGAACATAATATTAAGTTATTAATTAACAAACGGAATATGACTCGCTCGTCTTCTGTAATCTCTGTCCCCCCCTCCACGGGGTAATGAATCAACTCTTATTTCCCACTATTTCTTGATAGCTCTATGATTCTCTCTGAGTTAATATATTGTGATAGAAACAAAATACTAAAAAGTTCGATTTTTTAATATGCATTCTCACTTCAATTATTCCTTTTCAGTATGGGTTGCCCCTACAAATTGTATCATACAAGGATTTATATGGCTGGACAATGGACGAGATAGTGAAGATGATTGGTTTAAAGAATAATTGCACCTTTTGTGGGGTTTTTCGTCGACAGGTCTGAAACAACTCCTTCTATGACTTTACAGTGGTATTCTGCGCTTGGATTTTACTTCTCTCCTCTTTGCAGGAAAGGGTTGACAAACCATCCATTCCACTATATTTTTTTATTACAGTTATTATCTTATATGAACCTCTTGAGCATTTACAAGAGTGAGTGCATTGGAGACGAAGATATACTTCATTCATTATCTGCATTGTGTATTGCTCGATGAGTTGGGAAAAAGGAGTTTGTCCCATGAGTACATCAATTGTCATTTGAGGCTTGCTGTTATTTAATGAGAGAAAAAAAAAAGTGTCTAAGTTAGAATATGGTGTTGATGCAGCCCCTGAAAATAAAATAAAATAAAATAAATGCTCAGGTGAGGGTGGTGTTGTGATTCTGGCAGTGTGTGCCCATGCTCATGGACTTGCATATCATGTAGCGCCCCTGTTTGTTTGTTAACGTTGTTCTCCTTAATAACACAAGGAATTGGAATTTCCTGTTTTAGTGCTTTTATAGTTCTTGATGCACTGTCTCATACGTAATTGTAGGCATCCTGTCTCAACATGGGTTTTTTGTGCTTCTCTTTTCGATCCACTTGGTCTTAAAGATCACCCGTTTCTCTTGTTTAATTTTACTTGTGCATTATCATGGAATAATATTCTCATTGTTTTTGTAAATAAAGCATAGCAAGTTATATATGATGTTAAGATGTAAAATCAGCCGTAGAAAATCAATTAGGTTGACACGGTTTCATTGTATGTATTGATGGATTTTTTCCTGAAGGCTCTTGATAGAGGTGCTGCTTTGTTGAAAGTAGACAAGCTTGCCACTGGGCACAATGCAGATGACATGGCTGAAACAGTTCTATTGAATATTTTACGTGGTGATATTGCAAGGTACTCTAAATTAATATTTTTCTTTATTTTTTATGATTTTTAAACTTTTGCTCCCTCATTTGGTCTGCACTAGACTGAACCGATGTTTTGAATTTATAGATTGAGTAGATGTACTGCAATAATAACTGGTGAAGATGGACCAATTCCAAGATGCAAACCCTTCAAGTACACATATGAAAAGGAGATTGTAATATATCCTTCTATTGTAGTCTCATAATTGTTAAGCAACGATTGCATCATACACCATTAGTTTATATATATATATATATATATATATATTTTATAAAACCATTAATGGTTGATGCTAGTTGTAAGGCCTTAACCAGATTTTCACGTATGCTTATTTCAAGAAGCTGGACTACTTCTCCACCGAGTGTAAGTCTTTCTTGTTTTAGCCATTTTTGTTTTTAGTTTCCTCGAATTTCTGTGTATGATTGATAATCAATATGGGTTCATTATATTCAATTTGCTGCTATGAACTTGACGTCCTAATTGGCTTAATTAACTATTATTGAACGAGTGATCGTTTAAAAATACATTATCTGAGTATGAATTCATCAATTATAGGTTGCTTCTTTGAGCAGCAATTATATTTCAAAACTAGTTCTGTCTTAGATTTCTTGCTTTTCGTTGTCCTAAAGTATCATTTGCATCTGTTGTGCTATGTCTGAGATGTGTTGATCTCAAAATAACTTCAAATATGTCAGCTTCAAACTTTGCATTTATCTCTGTATCCATGACAACTTGAGGCATTCTTATTATGCTTTAATCTACGATGTTATTTCTACAAAATGTTAAAATATTCTGGGTCTAAGCCTTATGTAGATTTGCACTGGCTTCCGTGGAAATTTTGACTTTACAATGTTCCTTTCTACATGCCTTTGAATCTCTTTCTCAAAATTGCAGGCATTTATTCTCCAAATGCTTATCGTGGTTTTGCTCGTGAATTTATCAAGGATTTGGAACGAATCAGGTTTCAATTTAAGTTTAACCAGTCATTGCAAGACTAGTATTTATTATTTTACTTGCTGACAAGGATTGTGTTACCTATGATTCTCTCTCACTAAGCTTGTTACATTATGAACACTAATGCAGACCTAGGGCTATTCTTGATATCATTAAATCCGGTGAGGATTTCAGGATTTCCACTTCAACAAAGATGCCTGAGCAAGGGACATGTGAGCGATGCGGCTACATTTCAAGCCAGGTGTGATCTGCTCCTATTTTACATGATAAGAACACAAAATTTCCCAGACGTACCAGGGTTTATTCTTTTTGTAACTATAGTGCATTCCTAATGTTATCACCTCCACAATTGTGCATTGTATGTAGATTTTTAAGTACCTCTAGATCTGGAACTATTTGTCATCTTTTTTCGATAACATTCTCCATTGCTCACCATATGTTCAGAAACTCGTCAACGTAATCGCTTACAAGAAATTGTAGCTACTCTCTGTTACATGTGTCCCCAACCCTATTCATTTTCTGGTACAGAGCTTTTCAGCCTATCATTTGGGATCATTTACCATATAGTTCTACTCCCCAAACAGTCGCAATGTGTGGACTGAGAATGATCACTAATCAAAATCATGTCCAGATACTTTGAACAGCCTTTGTAGTTTTTTCCCCAATAAAGTTTTACCAACTTGCTGAACTTGTCTTGGGATGCAAACTATCATATCTGGAAAACCTACTGTCATTCTACCTATTTTTACTCATGCCTAATCAATTTACACCAACAGGAGGCTTCTAACTATTTATTTTGGCATTCATTTCTAATTTTCTGAGCATCTGTTATTTCCATTTACTTCATGTAGAAATGGTGTAAAGCATGTGTTCTGCTCGAGGGCCTAAACCGAGGTTTGCCGAAGTTGGGTATCGGGCGGAGTCGAGGTCTTGATAATGAGGAGAAGAGGGAAATGAAGGGAAGTGGTGGACATAAGAAAAGTATCGAGAGCAAACAGTGTGGCACCCTCGACTTC

mRNA sequence

ATGGAGGAAGGCGGCGCCAGAGCCAAGAAGGGCGTCTCTTCCCTTTGCTGCATCTGTAACAACAGAAAACCTTCCCTCAAGAGGCCAAAAACCCTGCAACAGATATGCAGAGAATGTTTCTATGAGGTATTTGAGGAGGAGATCCATCAAGTTATTGTGAAGAATCACTTGTTCAAACCTGGGGAACGAATTGCTGTTGGTGCATCTGGTGGAAAAGATTCTACCGTTCTTGCTTATGTGTTATCAGAATTGAATCGGCGGCACAATTACGGGCTTGATCTCTTTCTTTTATCAGTTGATGAGGGCATCACTGGATACAGAGATGACTCTCTTGAAACTGTGAAAAGAAATGAAATTCAGTATGGGTTGCCCCTACAAATTGTATCATACAAGGATTTATATGGCTGGACAATGGACGAGATAGTGAAGATGATTGGTTTAAAGAATAATTGCACCTTTTGTGGGGTTTTTCGTCGACAGGCTCTTGATAGAGGTGCTGCTTTGTTGAAAGTAGACAAGCTTGCCACTGGGCACAATGCAGATGACATGGCTGAAACAGTTCTATTGAATATTTTACGTGGTGATATTGCAAGATTGAGTAGATGTACTGCAATAATAACTGGTGAAGATGGACCAATTCCAAGATGCAAACCCTTCAAGTACACATATGAAAAGGAGATTATTTTCACGTATGCTTATTTCAAGAAGCTGGACTACTTCTCCACCGAGTGCATTTATTCTCCAAATGCTTATCGTGGTTTTGCTCGTGAATTTATCAAGGATTTGGAACGAATCAGACCTAGGGCTATTCTTGATATCATTAAATCCGGTGAGGATTTCAGGATTTCCACTTCAACAAAGATGCCTGAGCAAGGGACATGTGAGCGATGCGGCTACATTTCAAGCCAGAAATGGTGTAAAGCATGTGTTCTGCTCGAGGGCCTAAACCGAGGTTTGCCGAAGTTGGGTATCGGGCGGAGTCGAGGTCTTGATAATGAGGAGAAGAGGGAAATGAAGGGAAGTGGTGGACATAAGAAAAGTATCGAGAGCAAACAGTGTGGCACCCTCGACTTC

Coding sequence (CDS)

ATGGAGGAAGGCGGCGCCAGAGCCAAGAAGGGCGTCTCTTCCCTTTGCTGCATCTGTAACAACAGAAAACCTTCCCTCAAGAGGCCAAAAACCCTGCAACAGATATGCAGAGAATGTTTCTATGAGGTATTTGAGGAGGAGATCCATCAAGTTATTGTGAAGAATCACTTGTTCAAACCTGGGGAACGAATTGCTGTTGGTGCATCTGGTGGAAAAGATTCTACCGTTCTTGCTTATGTGTTATCAGAATTGAATCGGCGGCACAATTACGGGCTTGATCTCTTTCTTTTATCAGTTGATGAGGGCATCACTGGATACAGAGATGACTCTCTTGAAACTGTGAAAAGAAATGAAATTCAGTATGGGTTGCCCCTACAAATTGTATCATACAAGGATTTATATGGCTGGACAATGGACGAGATAGTGAAGATGATTGGTTTAAAGAATAATTGCACCTTTTGTGGGGTTTTTCGTCGACAGGCTCTTGATAGAGGTGCTGCTTTGTTGAAAGTAGACAAGCTTGCCACTGGGCACAATGCAGATGACATGGCTGAAACAGTTCTATTGAATATTTTACGTGGTGATATTGCAAGATTGAGTAGATGTACTGCAATAATAACTGGTGAAGATGGACCAATTCCAAGATGCAAACCCTTCAAGTACACATATGAAAAGGAGATTATTTTCACGTATGCTTATTTCAAGAAGCTGGACTACTTCTCCACCGAGTGCATTTATTCTCCAAATGCTTATCGTGGTTTTGCTCGTGAATTTATCAAGGATTTGGAACGAATCAGACCTAGGGCTATTCTTGATATCATTAAATCCGGTGAGGATTTCAGGATTTCCACTTCAACAAAGATGCCTGAGCAAGGGACATGTGAGCGATGCGGCTACATTTCAAGCCAGAAATGGTGTAAAGCATGTGTTCTGCTCGAGGGCCTAAACCGAGGTTTGCCGAAGTTGGGTATCGGGCGGAGTCGAGGTCTTGATAATGAGGAGAAGAGGGAAATGAAGGGAAGTGGTGGACATAAGAAAAGTATCGAGAGCAAACAGTGTGGCACCCTCGACTTC

Protein sequence

MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKPGERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHKKSIESKQCGTLDF

Homology

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BLAST of MS016063 vs. NCBI nr
Match: XP_022144278.1 (cytoplasmic tRNA 2-thiolation protein 1 [Momordica charantia])

HSP 1 Score: 722.2 bits (1863), Expect = 2.1e-204
Identity = 353/358 (98.60%), Postives = 355/358 (99.16%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP
Sbjct: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTK PEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKXPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHKKSIESKQCGTLDF 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGH+KSIESKQCGTLDF
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHEKSIESKQCGTLDF 357

[Close]

BLAST of MS016063 vs. NCBI nr
Match: XP_023002400.1 (cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita maxima])

HSP 1 Score: 691.4 bits (1783), Expect = 4.1e-195
Identity = 342/361 (94.74%), Postives = 349/361 (96.68%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE GA+ +KGVS LCCIC+NRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKNHLF+P
Sbjct: 1   MEEAGAKPRKGVSCLCCICDNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE-EKREMKG--SGGHKKSIESKQCGTLD 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE EKREMKG  S G  +SIESKQCGTLD
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNETEKREMKGRSSDGQTRSIESKQCGTLD 360

[Close]

BLAST of MS016063 vs. NCBI nr
Match: XP_023538431.1 (cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita pepo subsp. pepo] >XP_023538432.1 cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 688.7 bits (1776), Expect = 2.6e-194
Identity = 342/361 (94.74%), Postives = 348/361 (96.40%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE GA+ +KGVS LC ICNNRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKNHLF+P
Sbjct: 1   MEEAGAKPRKGVSCLCGICNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE-EKREMKG--SGGHKKSIESKQCGTLD 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE EKREMKG  S G  +SIESKQCGTLD
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEAEKREMKGRSSDGQTRSIESKQCGTLD 360

[Close]

BLAST of MS016063 vs. NCBI nr
Match: KAG6585514.1 (Cytoplasmic tRNA 2-thiolation protein 1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 688.7 bits (1776), Expect = 2.6e-194
Identity = 341/361 (94.46%), Postives = 349/361 (96.68%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE GA+++KGVS LC ICNNRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKNHLF+P
Sbjct: 1   MEEAGAKSRKGVSCLCGICNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE-EKREMKG--SGGHKKSIESKQCGTLD 359
           SSQKWCKACVLLEGLNRGLPK+GIGRSRGLDNE EKREMKG  S G  +SIESKQCGTLD
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKMGIGRSRGLDNETEKREMKGRSSDGQTRSIESKQCGTLD 360

[Close]

BLAST of MS016063 vs. NCBI nr
Match: XP_022951723.1 (cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita moschata])

HSP 1 Score: 688.3 bits (1775), Expect = 3.4e-194
Identity = 341/361 (94.46%), Postives = 349/361 (96.68%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE GA++++GVS LC ICNNRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKNHLF+P
Sbjct: 1   MEEAGAKSRRGVSCLCGICNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE-EKREMKG--SGGHKKSIESKQCGTLD 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE EKREMKG  S G  +SIESKQCGTLD
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNETEKREMKGRSSDGQTRSIESKQCGTLD 360

[Close]

BLAST of MS016063 vs. ExPASy Swiss-Prot
Match: O64862 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana OX=3702 GN=NCS6 PE=2 SV=2)

HSP 1 Score: 643.7 bits (1659), Expect = 1.3e-183
Identity = 311/354 (87.85%), Postives = 333/354 (94.07%), Query Frame = 0


Query: 6   ARAKKGVSS-LCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKPGERI 65
           A+ KK V+S LCC+CN R+P LKRPKTLQQICRECFYEVFEEEIHQVIV+N LFK GER+
Sbjct: 3   AKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERV 62

Query: 66  AVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLP 125
           A+GASGGKDSTVLAYVLSELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGLP
Sbjct: 63  AIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLP 122

Query: 126 LQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMA 185
           L+IVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKV+KL TGHNADD+A
Sbjct: 123 LKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIA 182

Query: 186 ETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYFSTEC 245
           ETVLLNILRGDIARLSRCT+I TGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYFSTEC
Sbjct: 183 ETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTEC 242

Query: 246 IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQK 305
           IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRI+T+TKMPEQGTCERCGYISSQK
Sbjct: 243 IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQK 302

Query: 306 WCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHKKSIESKQCGTLDF 359
           WCKACVLLEGLNRGLPK+GIGR RG++ +  +E K  G   KSIESKQCG+LDF
Sbjct: 303 WCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCGSLDF 355

[Close]

BLAST of MS016063 vs. ExPASy Swiss-Prot
Match: Q6Z6G6 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NCS6 PE=2 SV=1)

HSP 1 Score: 585.5 bits (1508), Expect = 4.1e-166
Identity = 287/349 (82.23%), Postives = 315/349 (90.26%), Query Frame = 0


Query: 13  SSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKPGERIAVGASGGK 72
           S LC  C  RK +LKRPKTL+QICRECFY VFE+EIHQ IV N+LFKPG+R+A+GASGGK
Sbjct: 17  SRLCTRCGERKAALKRPKTLEQICRECFYVVFEDEIHQTIVDNNLFKPGDRVAIGASGGK 76

Query: 73  DSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKD 132
           DSTVLAYVLSELNRRH Y LDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPL+IVSYKD
Sbjct: 77  DSTVLAYVLSELNRRHKYCLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLKIVSYKD 136

Query: 133 LYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMAETVLLNIL 192
           LYGWTMD+IVK IGLKNNCTFCGVFRRQALDRGAALLKVDK+ TGHNADD+AETVLLNIL
Sbjct: 137 LYGWTMDDIVKAIGLKNNCTFCGVFRRQALDRGAALLKVDKIVTGHNADDIAETVLLNIL 196

Query: 193 RGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYFSTECIYSPNAYR 252
           RGDIARLSRCT I TGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYFSTECIYSPNAYR
Sbjct: 197 RGDIARLSRCTFITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYR 256

Query: 253 GFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLL 312
           GFAREFIKDLER+RPRAILDIIKSGE+FRIST+T+MPEQGTCERCGYISSQK CKACVLL
Sbjct: 257 GFAREFIKDLERMRPRAILDIIKSGENFRISTTTRMPEQGTCERCGYISSQKLCKACVLL 316

Query: 313 EGLNRGLPKLGIGRSRGL---DNEEKREMKGSGGHKKSIESKQCGTLDF 359
           +GLNRGLPKLGIGR++G+   D + +++   S  ++ S++ K  G  DF
Sbjct: 317 DGLNRGLPKLGIGRTKGIAGGDGDCEQQATRSERNRSSLQGKH-GNFDF 363

[Close]

BLAST of MS016063 vs. ExPASy Swiss-Prot
Match: A8JF71 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamydomonas reinhardtii OX=3055 GN=NCS6 PE=3 SV=1)

HSP 1 Score: 489.2 bits (1258), Expect = 4.0e-137
Identity = 232/322 (72.05%), Postives = 269/322 (83.54%), Query Frame = 0


Query: 15  LCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKPGERIAVGASGGKDS 74
           LC  CN  +  L RPKT +Q+CRECF+  FEEE+HQ IV N LFK GER+AV ASGGKDS
Sbjct: 5   LCVRCNTSRAMLNRPKTQEQVCRECFFTAFEEEVHQTIVDNKLFKHGERLAVAASGGKDS 64

Query: 75  TVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLY 134
           TVLA+++S LN R+NYGLDLFLLS+DEGITGYRDDSLETVKRNE QYG+PL++VSYK+LY
Sbjct: 65  TVLAHIMSTLNARYNYGLDLFLLSIDEGITGYRDDSLETVKRNEQQYGIPLKVVSYKELY 124

Query: 135 GWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRG 194
           GWTMDEIV  IG KNNCTFCGVFRRQALDRGA L+  +K+ATGHNADD+AETVLLNILRG
Sbjct: 125 GWTMDEIVSQIGTKNNCTFCGVFRRQALDRGAVLMGANKIATGHNADDVAETVLLNILRG 184

Query: 195 DIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYFSTECIYSPNAYRGF 254
           D+ RL RC  IITGED  +PR KPFKY YEKEI+  YAY+KKLDYFSTECIY+P A RGF
Sbjct: 185 DVPRLGRCANIITGEDSSLPRVKPFKYAYEKEIVL-YAYYKKLDYFSTECIYAPFAARGF 244

Query: 255 AREFIKDLERIRPRAILDIIKSGEDFRISTST--KMPEQGTCERCGYISSQKWCKACVLL 314
           AREFIKDLE  RP AI+D+I+S EDF  + ++  K+P+  TCERCGYISSQ  CKACVLL
Sbjct: 245 AREFIKDLEAARPLAIIDVIRSAEDFVFAAASDEKLPQPRTCERCGYISSQPVCKACVLL 304

Query: 315 EGLNRGLPKLGIGRSRGLDNEE 335
           EGLNRG+P+LG+ R+RG   E+
Sbjct: 305 EGLNRGMPRLGVSRTRGRRGEK 325

[Close]

BLAST of MS016063 vs. ExPASy Swiss-Prot
Match: Q5FW05 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE=2 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 4.1e-134
Identity = 225/318 (70.75%), Postives = 261/318 (82.08%), Query Frame = 0


Query: 16  CCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKPGERIAVGASGGKDST 75
           C  C  R+  L+RPKT   +C++CF+  FEEEIH  IV   LF PGE++ +GASGGKDST
Sbjct: 5   CSSCEERRAVLRRPKTGHSLCKDCFFHAFEEEIHHTIVSAKLFNPGEKVGIGASGGKDST 64

Query: 76  VLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYG 135
           VLA+VL  LN R+ YGLDL L+SVDEGI+GYRDDSLETVKRN+ QY LPL+IVSY++LYG
Sbjct: 65  VLAHVLKVLNERYAYGLDLILVSVDEGISGYRDDSLETVKRNQQQYELPLKIVSYQELYG 124

Query: 136 WTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGD 195
           WTMD+IVK +GLKNNCTFCGVFRRQALDRGA +L V+K+ TGHNADD+AETVL+N LRGD
Sbjct: 125 WTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGVNKICTGHNADDIAETVLMNFLRGD 184

Query: 196 IARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYFSTECIYSPNAYRGFA 255
           IARL RCT+I TG +G IPRCKP KY YEKEI+  YAYFKKLDYFSTECIYSPNAYRG A
Sbjct: 185 IARLRRCTSITTGSEGAIPRCKPLKYAYEKEIVL-YAYFKKLDYFSTECIYSPNAYRGHA 244

Query: 256 REFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
           R F+KDLE IRP +I+DII SGE+  +    +MP QGTC RCGYISSQ  CKACVLLEGL
Sbjct: 245 RAFLKDLEAIRPSSIMDIIHSGENLSVKEDVRMPVQGTCTRCGYISSQSLCKACVLLEGL 304

Query: 316 NRGLPKLGIGRSRGLDNE 334
           NRGLPKLGIG+   L ++
Sbjct: 305 NRGLPKLGIGKHHKLHHK 321

[Close]

BLAST of MS016063 vs. ExPASy Swiss-Prot
Match: Q05AW7 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 SV=1)

HSP 1 Score: 475.7 bits (1223), Expect = 4.6e-133
Identity = 224/318 (70.44%), Postives = 261/318 (82.08%), Query Frame = 0


Query: 16  CCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKPGERIAVGASGGKDST 75
           C  C   +  L+RPKT   +C++CF+  FEEEIH  IV   LF PGE++ +GASGGKDST
Sbjct: 5   CSSCEEWRAVLRRPKTGHSLCKDCFFYAFEEEIHNTIVSAKLFHPGEKVGIGASGGKDST 64

Query: 76  VLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYG 135
           VLA+V+  LN R+ YGLDL LLSVDEGI+GYRDDSL+TVKRN+ QY LPL+IVSY +LYG
Sbjct: 65  VLAHVMKVLNERYAYGLDLILLSVDEGISGYRDDSLQTVKRNQQQYELPLKIVSYLELYG 124

Query: 136 WTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGD 195
           WTMD+IVK +GLKNNCTFCGVFRRQALDRGA +L ++K+ TGHNADD+AETVL+N LRGD
Sbjct: 125 WTMDQIVKQVGLKNNCTFCGVFRRQALDRGAMMLGINKICTGHNADDIAETVLMNFLRGD 184

Query: 196 IARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYFSTECIYSPNAYRGFA 255
           IARL RCTAI TG +G IPRCKP KYTYEKEI+  YAYFKKLDYFSTECIYSPNAYRG A
Sbjct: 185 IARLRRCTAITTGSEGAIPRCKPLKYTYEKEIVL-YAYFKKLDYFSTECIYSPNAYRGHA 244

Query: 256 REFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGL 315
           R F+KDLE IRP +I+DII SGE+  ++   +MP QGTC RCGYISSQ  CKACVLLEGL
Sbjct: 245 RVFLKDLEAIRPSSIIDIIHSGENLSVNEDVRMPVQGTCTRCGYISSQSLCKACVLLEGL 304

Query: 316 NRGLPKLGIGRSRGLDNE 334
           NRGLPKLGIG+   L ++
Sbjct: 305 NRGLPKLGIGKHHKLHHK 321

[Close]

BLAST of MS016063 vs. ExPASy TrEMBL
Match: A0A6J1CSW4 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Momordica charantia OX=3673 GN=LOC111014001 PE=3 SV=1)

HSP 1 Score: 722.2 bits (1863), Expect = 1.0e-204
Identity = 353/358 (98.60%), Postives = 355/358 (99.16%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP
Sbjct: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTK PEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKXPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHKKSIESKQCGTLDF 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGH+KSIESKQCGTLDF
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHEKSIESKQCGTLDF 357

[Close]

BLAST of MS016063 vs. ExPASy TrEMBL
Match: A0A6J1KNU4 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111496254 PE=3 SV=1)

HSP 1 Score: 691.4 bits (1783), Expect = 2.0e-195
Identity = 342/361 (94.74%), Postives = 349/361 (96.68%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE GA+ +KGVS LCCIC+NRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKNHLF+P
Sbjct: 1   MEEAGAKPRKGVSCLCCICDNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE-EKREMKG--SGGHKKSIESKQCGTLD 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE EKREMKG  S G  +SIESKQCGTLD
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNETEKREMKGRSSDGQTRSIESKQCGTLD 360

[Close]

BLAST of MS016063 vs. ExPASy TrEMBL
Match: A0A6J1GII7 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111454465 PE=3 SV=1)

HSP 1 Score: 688.3 bits (1775), Expect = 1.7e-194
Identity = 341/361 (94.46%), Postives = 349/361 (96.68%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE GA++++GVS LC ICNNRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKNHLF+P
Sbjct: 1   MEEAGAKSRRGVSCLCGICNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE-EKREMKG--SGGHKKSIESKQCGTLD 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNE EKREMKG  S G  +SIESKQCGTLD
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNETEKREMKGRSSDGQTRSIESKQCGTLD 360

[Close]

BLAST of MS016063 vs. ExPASy TrEMBL
Match: A0A0A0LKF0 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis sativus OX=3659 GN=NCS6 PE=3 SV=1)

HSP 1 Score: 677.9 bits (1748), Expect = 2.2e-191
Identity = 333/359 (92.76%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE   + K+ VSSLCC+CNNRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKN LF+P
Sbjct: 1   MEEAAPKPKRAVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGG-HKKSIESKQCGTLDF 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLD+E KRE  GS   H +SIESKQCG+LDF
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDSEGKRETIGSNNVHTRSIESKQCGSLDF 358

[Close]

BLAST of MS016063 vs. ExPASy TrEMBL
Match: A0A1S3BD41 (Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis melo OX=3656 GN=LOC103488373 PE=3 SV=1)

HSP 1 Score: 676.0 bits (1743), Expect = 8.5e-191
Identity = 332/359 (92.48%), Postives = 343/359 (95.54%), Query Frame = 0


Query: 1   MEEGGARAKKGVSSLCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKP 60
           MEE G + K+ VSSLCC+CNNRK +LKRPKTLQQICRECFYEVFEEEIHQVIVKN LF+P
Sbjct: 1   MEEAGPKPKRPVSSLCCLCNNRKAALKRPKTLQQICRECFYEVFEEEIHQVIVKNQLFRP 60

Query: 61  GERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120
           GERIAVGASGGKDSTVLAYVLSELN+RHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ
Sbjct: 61  GERIAVGASGGKDSTVLAYVLSELNQRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQ 120

Query: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNA 180
           YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAA LKVDKLATGHNA
Sbjct: 121 YGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAAWLKVDKLATGHNA 180

Query: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYF 240
           DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYF
Sbjct: 181 DDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYF 240

Query: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300
           STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI
Sbjct: 241 STECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYI 300

Query: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGG-HKKSIESKQCGTLDF 359
           SSQKWCKACVLLEGLNRGLPKLGIGRSRGLD+E K+E  GS   H +SIESKQCG+LDF
Sbjct: 301 SSQKWCKACVLLEGLNRGLPKLGIGRSRGLDSEGKKETIGSNNVHTRSIESKQCGSLDF 358

[Close]

BLAST of MS016063 vs. TAIR 10
Match: AT2G44270.1 (repressor of lrx1 )

HSP 1 Score: 643.7 bits (1659), Expect = 9.0e-185
Identity = 311/354 (87.85%), Postives = 333/354 (94.07%), Query Frame = 0


Query: 6   ARAKKGVSS-LCCICNNRKPSLKRPKTLQQICRECFYEVFEEEIHQVIVKNHLFKPGERI 65
           A+ KK V+S LCC+CN R+P LKRPKTLQQICRECFYEVFEEEIHQVIV+N LFK GER+
Sbjct: 3   AKNKKAVASRLCCLCNLRRPVLKRPKTLQQICRECFYEVFEEEIHQVIVQNRLFKSGERV 62

Query: 66  AVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETVKRNEIQYGLP 125
           A+GASGGKDSTVLAYVLSELNRRHNYGLDLFLLS+DEGITGYRDDSLETVKRNE+QYGLP
Sbjct: 63  AIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETVKRNEVQYGLP 122

Query: 126 LQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKLATGHNADDMA 185
           L+IVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKV+KL TGHNADD+A
Sbjct: 123 LKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKLVTGHNADDIA 182

Query: 186 ETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYFKKLDYFSTEC 245
           ETVLLNILRGDIARLSRCT+I TGEDGPIPRCKPFKYTYEKEI+  YAYFKKLDYFSTEC
Sbjct: 183 ETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFKYTYEKEIVM-YAYFKKLDYFSTEC 242

Query: 246 IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTCERCGYISSQK 305
           IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRI+T+TKMPEQGTCERCGYISSQK
Sbjct: 243 IYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTCERCGYISSQK 302

Query: 306 WCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHKKSIESKQCGTLDF 359
           WCKACVLLEGLNRGLPK+GIGR RG++ +  +E K  G   KSIESKQCG+LDF
Sbjct: 303 WCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCGSLDF 355

[Close]

BLAST of MS016063 vs. TAIR 10
Match: AT2G44270.2 (repressor of lrx1 )

HSP 1 Score: 613.2 bits (1580), Expect = 1.3e-175
Identity = 303/364 (83.24%), Postives = 324/364 (89.01%), Query Frame = 0


Query: 6   ARAKKGVSS-LCCICNNRKPSLKRPKTLQQ----------ICRECFYEVFEEEIHQVIVK 65
           A+ KK V+S LCC+CN R+P LKRPKTLQQ            RECFYEVFEEEIHQVIV+
Sbjct: 3   AKNKKAVASRLCCLCNLRRPVLKRPKTLQQQKLGTHFYTVSVRECFYEVFEEEIHQVIVQ 62

Query: 66  NHLFKPGERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSVDEGITGYRDDSLETV 125
           N LFK GER+A+GASGGKDSTVLAYVLSELNRRHNYGLDLFLLS+DEGITGYRDDSLETV
Sbjct: 63  NRLFKSGERVAIGASGGKDSTVLAYVLSELNRRHNYGLDLFLLSIDEGITGYRDDSLETV 122

Query: 126 KRNEIQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVDKL 185
           KRNE+QYGLPL+IVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKV+KL
Sbjct: 123 KRNEVQYGLPLKIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVFRRQALDRGAALLKVEKL 182

Query: 186 ATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCKPFKYTYEKEIIFTYAYF 245
            TGHNADD+AETVLLNILRGDIARLSRCT+I TGEDGPIPRCKPF         FTYAYF
Sbjct: 183 VTGHNADDIAETVLLNILRGDIARLSRCTSITTGEDGPIPRCKPFN--------FTYAYF 242

Query: 246 KKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRISTSTKMPEQGTC 305
           KKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRI+T+TKMPEQGTC
Sbjct: 243 KKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSGEDFRIATTTKMPEQGTC 302

Query: 306 ERCGYISSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKREMKGSGGHKKSIESKQCG 359
           ERCGYISSQKWCKACVLLEGLNRGLPK+GIGR RG++ +  +E K  G   KSIESKQCG
Sbjct: 303 ERCGYISSQKWCKACVLLEGLNRGLPKMGIGRPRGVNGDHNKETKKPGSVAKSIESKQCG 358

[Close]

BLAST of MS016063 vs. TAIR 10
Match: AT1G76170.1 (2-thiocytidine tRNA biosynthesis protein, TtcA )

HSP 1 Score: 578.6 bits (1490), Expect = 3.6e-165
Identity = 281/321 (87.54%), Postives = 302/321 (94.08%), Query Frame = 0


Query: 38  ECFYEVFEEEIHQVIVKNHLFKPGERIAVGASGGKDSTVLAYVLSELNRRHNYGLDLFLL 97
           ECFYEVFEEEIHQVIV N LFK GER+A+GASGGKDS+VLAYVLSELNRRH+YGLDLFLL
Sbjct: 14  ECFYEVFEEEIHQVIVGNRLFKFGERVAIGASGGKDSSVLAYVLSELNRRHSYGLDLFLL 73

Query: 98  SVDEGITGYRDDSLETVKRNEIQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF 157
           S+DEGITGYRDDSLETVKRNE+QYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF
Sbjct: 74  SIDEGITGYRDDSLETVKRNEVQYGLPLQIVSYKDLYGWTMDEIVKMIGLKNNCTFCGVF 133

Query: 158 RRQALDRGAALLKVDKLATGHNADDMAETVLLNILRGDIARLSRCTAIITGEDGPIPRCK 217
           RRQALDRGAALLKVDKL TGHNADD+AETV+LNILRGDIARLSRCT+I TGEDGPIPRCK
Sbjct: 134 RRQALDRGAALLKVDKLVTGHNADDIAETVVLNILRGDIARLSRCTSITTGEDGPIPRCK 193

Query: 218 PFKYTYEKEIIFTYAYFKKLDYFSTECIYSPNAYRGFAREFIKDLERIRPRAILDIIKSG 277
           PFKYTYEKEI+  YAYFKKLDYFSTECIYSPNAYRGFA EFI DLER+RPRAILDIIKSG
Sbjct: 194 PFKYTYEKEIVM-YAYFKKLDYFSTECIYSPNAYRGFACEFINDLERLRPRAILDIIKSG 253

Query: 278 EDFRISTSTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKLGIGRSRGLDNEEKRE 337
           EDFRI+T+TKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPK+GIGR RG  N + ++
Sbjct: 254 EDFRIATTTKMPEQGTCERCGYISSQKWCKACVLLEGLNRGLPKMGIGRPRGNVNGDYKD 313

Query: 338 MKGSGGHKKSIESKQCGTLDF 359
           +K +    K+IESKQCG+LDF
Sbjct: 314 IK-ARSTAKTIESKQCGSLDF 332

The following BLAST results are available for this feature:

BLAST of MS016063 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144278.1	2.1e-204	98.60	cytoplasmic tRNA 2-thiolation protein 1 [Momordica charantia]	[more]
XP_023002400.1	4.1e-195	94.74	cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita maxima]	[more]
XP_023538431.1	2.6e-194	94.74	cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita pepo subsp. pepo] >XP_0235384...	[more]
KAG6585514.1	2.6e-194	94.46	Cytoplasmic tRNA 2-thiolation protein 1, partial [Cucurbita argyrosperma subsp. ...	[more]
XP_022951723.1	3.4e-194	94.46	cytoplasmic tRNA 2-thiolation protein 1 [Cucurbita moschata]	[more]

BLAST of MS016063 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64862	1.3e-183	87.85	Cytoplasmic tRNA 2-thiolation protein 1 OS=Arabidopsis thaliana OX=3702 GN=NCS6 ...	[more]
Q6Z6G6	4.1e-166	82.23	Cytoplasmic tRNA 2-thiolation protein 1 OS=Oryza sativa subsp. japonica OX=39947...	[more]
A8JF71	4.0e-137	72.05	Cytoplasmic tRNA 2-thiolation protein 1 OS=Chlamydomonas reinhardtii OX=3055 GN=...	[more]
Q5FW05	4.1e-134	70.75	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus tropicalis OX=8364 GN=ctu1 PE...	[more]
Q05AW7	4.6e-133	70.44	Cytoplasmic tRNA 2-thiolation protein 1 OS=Xenopus laevis OX=8355 GN=ctu1 PE=2 S...	[more]

BLAST of MS016063 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSW4	1.0e-204	98.60	Cytoplasmic tRNA 2-thiolation protein 1 OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1KNU4	2.0e-195	94.74	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111496...	[more]
A0A6J1GII7	1.7e-194	94.46	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A0A0LKF0	2.2e-191	92.76	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis sativus OX=3659 GN=NCS6 PE=3 ...	[more]
A0A1S3BD41	8.5e-191	92.48	Cytoplasmic tRNA 2-thiolation protein 1 OS=Cucumis melo OX=3656 GN=LOC103488373 ...	[more]

BLAST of MS016063 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G44270.1	9.0e-185	87.85	repressor of lrx1	[more]
AT2G44270.2	1.3e-175	83.24	repressor of lrx1	[more]
AT1G76170.1	3.6e-165	87.54	2-thiocytidine tRNA biosynthesis protein, TtcA	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011063	tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal	PFAM	PF01171	ATP_bind_3	coord: 64..249 e-value: 6.5E-15 score: 55.3
IPR035107	tRNA thiolation protein, TtcA/Ctu1 type	PIRSF	PIRSF004976	ATPase_YdaO	coord: 12..324 e-value: 5.6E-125 score: 414.2
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620	HUPs	coord: 15..334 e-value: 2.8E-94 score: 317.7
IPR032442	Cytoplasmic tRNA 2-thiolation protein 1, C-terminal	PFAM	PF16503	zn-ribbon_14	coord: 292..322 e-value: 1.6E-18 score: 65.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..358
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 330..352
None	No IPR available	PANTHER	PTHR11807	ATPASES OF THE PP SUPERFAMILY-RELATED	coord: 15..339
None	No IPR available	CDD	cd01993	Alpha_ANH_like_II	coord: 63..250 e-value: 3.54316E-92 score: 271.813
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 49..280
IPR000541	Cytoplasmic tRNA 2-thiolation protein 1	PANTHER	PTHR11807:SF12	CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 1	coord: 15..339
IPR000541	Cytoplasmic tRNA 2-thiolation protein 1	HAMAP	MF_03053	CTU1	coord: 14..327 score: 51.391319

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS016063.1	MS016063.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008033	tRNA processing
biological_process	GO:0034227	tRNA thio-modification
biological_process	GO:0002098	tRNA wobble uridine modification
molecular_function	GO:0000049	tRNA binding