MS015906 (gene) Bitter gourd (TR) v1

Overview


Name	MS015906
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CUE domain-containing protein
Location	scaffold943_2: 792992 .. 794772 (-)
RNA-Seq Expression	MS015906
Synteny	MS015906

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGGCTGGAGTATGTGGAAAGCGGGTGGGGTTTGAGGAGATCTTCGGATCTTCTTCTCCGACGGCCTGTTCTTCGGCAAAGAGGTCCCGGTGGTCCAGTTTCGGATCCCCGACCCGATCGGAGTTCGGGTCCGGACCTGAGGATTCTGCTTCGGTTCTGCTTCAAATGTTTCCGGGAGTCGGTGCCGAGGTTTGTTGCGTGAATTTTTCATTTTTGTTTTTACTTGGAACGATGGCACGTTTATGTTTCATTTCTGATTCAGGGTATGAGGAAGCTATATGAATTTCACTTTTAGGGAGCATTACTTCTGCTCCATGTTATTGATTCTGTCTTGGATATCTGTTTATAAGTGATGCTTCGACATGTTATCAGAAAGGAATTGCATAAAGATGGTTTGATATCAAGATATCCGTAGGAATCATAATCATTTAATTTGTCATAAATGAAAGCTCTTGGGAGATCTGATTGTTCTTTTTCTGCACATTTAGCGGGTCAAAACTGTTCTTATGAATCACAACAAGATTGAAGATGCAATTGATGTTCTACAGGTGCCTTCCTTTGACGACTTTAATGCTCGTGTCGATTCTGCAACAATCGGAAATTGTTCTACAGTTCCTGATGAGAGAGCAGCTACATGTAAGTTGTTATTATAATTCCATATTGTTCGACATTGGTTTAAACTAGTTCAAAGGCTGAAAAAGTAGATATACTTGGCTTGGATATCTTCTAAAAGAATGAGTTTTTTTTTTTTTTTTTTTTGGATTTCTGTAATCAGGCAGTCAAATGTCACACGAGAAGGTTGAAAAAGATAAAGACGTTAGTTCAGCCGTTGCTGAAGGAAATGCAATGCATGGGTCCAAGTGGGTGGATATGTTTGTGCAAGAGATGACGAATGCAATAGATCTTGACGATGCTAGAACTCGAGCTGGAAGGATTTTAGAAGCTTTCGAACATAACGTAACTGCGTTTTCAAGAGAATCAGAGGAGGTAGTGTAGAAGCATTTTCCATTAGACTTTTTAATCTCCTTTTGATGAAGTGTCAAGAGGTGAAGTTTATGTTTCCTTCCACATTGTATTGCAGTTAAAACATGCTTCTTTGAAGGAGCATTTGCAAAACTTGGTAAACGACAACCAAATTTTAAAGAGAGCTGTAGCCATTCAGCACGAGCGCAATCTCGAGCAAGAAGAGAAGACAAAAGAAGTTCATCAGTTAAAGCACGTCTTATGCCAGTATCAAGAACAAATTCAAAGTTTAGAGGTATGCAGATTGCTTACAGTTATCATGTTATGTGCCTAAATCCTTGTGATAGTTTGACTTTTATATTCATTCATTATTTTCACCCATATCAGCTATTACTGCAATATCTTTTGTTTCTAGACTTGGCTGTCCTGGTCATATTTTTGGTATTGATTCTATGACACTATATTTGGTGTGTCTATTGATTCGGTATCTGCGATGTTATTCAAATTAGAACGACACGACTTGTCTCAGCGGTCGTGTTCTTGTTTATCGGGGCTTGTGTCGGATCTTATACCCTGACTCAGTGCAAGATTAAGAGAAGTTAGACCAAATCAGAATAGTCGTTGATATCGTCCTCTGTTCCTTGATTCTAGATGCAGTCTTAAGAGAAACGATTCTGAAAAAATTACTCTTGTTATAAAAGCTACAAATTCTCATGTTGCTATGAATTGTTGTTGTGCAGGTAAGAAACTACACTTTAAATCTCCATCTGCAGAGGGCACAATCTGTTTCAGGACACTTCCACCAAGACATATTT

mRNA sequence

ATGTCGGCTGGAGTATGTGGAAAGCGGGTGGGGTTTGAGGAGATCTTCGGATCTTCTTCTCCGACGGCCTGTTCTTCGGCAAAGAGGTCCCGGTGGTCCAGTTTCGGATCCCCGACCCGATCGGAGTTCGGGTCCGGACCTGAGGATTCTGCTTCGGTTCTGCTTCAAATGTTTCCGGGAGTCGGTGCCGAGGTTTGTTGCCGGGTCAAAACTGTTCTTATGAATCACAACAAGATTGAAGATGCAATTGATGTTCTACAGGTGCCTTCCTTTGACGACTTTAATGCTCGTGTCGATTCTGCAACAATCGGAAATTGTTCTACAGTTCCTGATGAGAGAGCAGCTACATGTAATCAAATGTCACACGAGAAGGTTGAAAAAGATAAAGACGTTAGTTCAGCCGTTGCTGAAGGAAATGCAATGCATGGGTCCAAGTGGGTGGATATGTTTGTGCAAGAGATGACGAATGCAATAGATCTTGACGATGCTAGAACTCGAGCTGGAAGGATTTTAGAAGCTTTCGAACATAACGTAACTGCGTTTTCAAGAGAATCAGAGGAGTTAAAACATGCTTCTTTGAAGGAGCATTTGCAAAACTTGGTAAACGACAACCAAATTTTAAAGAGAGCTGTAGCCATTCAGCACGAGCGCAATCTCGAGCAAGAAGAGAAGACAAAAGAAGTTCATCAGTTAAAGCACGTCTTATGCCAGTATCAAGAACAAATTCAAAGTTTAGAGGTAAGAAACTACACTTTAAATCTCCATCTGCAGAGGGCACAATCTGTTTCAGGACACTTCCACCAAGACATATTT

Coding sequence (CDS)

ATGTCGGCTGGAGTATGTGGAAAGCGGGTGGGGTTTGAGGAGATCTTCGGATCTTCTTCTCCGACGGCCTGTTCTTCGGCAAAGAGGTCCCGGTGGTCCAGTTTCGGATCCCCGACCCGATCGGAGTTCGGGTCCGGACCTGAGGATTCTGCTTCGGTTCTGCTTCAAATGTTTCCGGGAGTCGGTGCCGAGGTTTGTTGCCGGGTCAAAACTGTTCTTATGAATCACAACAAGATTGAAGATGCAATTGATGTTCTACAGGTGCCTTCCTTTGACGACTTTAATGCTCGTGTCGATTCTGCAACAATCGGAAATTGTTCTACAGTTCCTGATGAGAGAGCAGCTACATGTAATCAAATGTCACACGAGAAGGTTGAAAAAGATAAAGACGTTAGTTCAGCCGTTGCTGAAGGAAATGCAATGCATGGGTCCAAGTGGGTGGATATGTTTGTGCAAGAGATGACGAATGCAATAGATCTTGACGATGCTAGAACTCGAGCTGGAAGGATTTTAGAAGCTTTCGAACATAACGTAACTGCGTTTTCAAGAGAATCAGAGGAGTTAAAACATGCTTCTTTGAAGGAGCATTTGCAAAACTTGGTAAACGACAACCAAATTTTAAAGAGAGCTGTAGCCATTCAGCACGAGCGCAATCTCGAGCAAGAAGAGAAGACAAAAGAAGTTCATCAGTTAAAGCACGTCTTATGCCAGTATCAAGAACAAATTCAAAGTTTAGAGGTAAGAAACTACACTTTAAATCTCCATCTGCAGAGGGCACAATCTGTTTCAGGACACTTCCACCAAGACATATTT

Protein sequence

MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPGVGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQMSHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTAFSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQEQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF

Homology

[Close]

BLAST of MS015906 vs. NCBI nr
Match: XP_022143875.1 (uncharacterized protein LOC111013683 isoform X1 [Momordica charantia])

HSP 1 Score: 513.8 bits (1322), Expect = 8.8e-142
Identity = 267/271 (98.52%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60
           MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60

Query: 61  VGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQM 120
           VGAE   RVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATC+QM
Sbjct: 61  VGAE---RVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCSQM 120

Query: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180
           SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA
Sbjct: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180

Query: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240
           FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE
Sbjct: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240

Query: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 268

[Close]

BLAST of MS015906 vs. NCBI nr
Match: XP_022143877.1 (uncharacterized protein LOC111013683 isoform X2 [Momordica charantia])

HSP 1 Score: 468.0 bits (1203), Expect = 5.5e-128
Identity = 247/271 (91.14%), Postives = 248/271 (91.51%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60
           MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60

Query: 61  VGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQM 120
           VGAE                       VPSFDDFNARVDSATIGNCSTVPDERAATC+QM
Sbjct: 61  VGAE-----------------------VPSFDDFNARVDSATIGNCSTVPDERAATCSQM 120

Query: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180
           SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA
Sbjct: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180

Query: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240
           FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE
Sbjct: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240

Query: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 248

[Close]

BLAST of MS015906 vs. NCBI nr
Match: XP_004142078.1 (uncharacterized protein LOC101216078 [Cucumis sativus] >KGN54236.1 hypothetical protein Csa_018151 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 3.5e-114
Identity = 224/272 (82.35%), Postives = 234/272 (86.03%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFG-SSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFP 60
           MSAGVCGKRVGFEEIFG SSSPTACSSAKRSRWS+FGSPTRS+FGSGP+DSASVLLQMFP
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSSPTACSSAKRSRWSTFGSPTRSDFGSGPDDSASVLLQMFP 60

Query: 61  GVGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQ 120
           GVGAE                       VPSFDDF+AR  SATIGNCSTVPDER ATC+Q
Sbjct: 61  GVGAE-----------------------VPSFDDFSARGHSATIGNCSTVPDERTATCSQ 120

Query: 121 MSHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVT 180
           MSHEK+E+ KDV S VAEGN MHGSKWVDMFVQEM  A+D+ DAR RA RILEAFEHNVT
Sbjct: 121 MSHEKIEEAKDVGSTVAEGNGMHGSKWVDMFVQEMAGAVDVGDARIRAARILEAFEHNVT 180

Query: 181 AFSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQ 240
             SRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKT+EVHQLKHVLCQYQ
Sbjct: 181 VNSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTREVHQLKHVLCQYQ 240

Query: 241 EQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           EQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 EQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 249

[Close]

BLAST of MS015906 vs. NCBI nr
Match: XP_022978050.1 (uncharacterized protein LOC111478149 [Cucurbita maxima])

HSP 1 Score: 421.0 bits (1081), Expect = 7.7e-114
Identity = 223/271 (82.29%), Postives = 232/271 (85.61%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60
           MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSG EDSASVLLQMFPG
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGHEDSASVLLQMFPG 60

Query: 61  VGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQM 120
           VGAE                       VPSFDDF+ARVDSATIGNCSTVPDER ATC+QM
Sbjct: 61  VGAE-----------------------VPSFDDFSARVDSATIGNCSTVPDERTATCSQM 120

Query: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180
           SHEKVE+  D  SA+ EG  MHGSKWVDMFVQEM +A+D+ DAR RA RILEAFEHNVT 
Sbjct: 121 SHEKVEEATDAGSAIGEGYGMHGSKWVDMFVQEMGSAVDVGDARIRAARILEAFEHNVTV 180

Query: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240
            SRESEELKHASLK HLQ+LVNDNQILKRAVAIQHERNLEQEEKT+EVHQLKHVLCQYQE
Sbjct: 181 HSRESEELKHASLKGHLQSLVNDNQILKRAVAIQHERNLEQEEKTREVHQLKHVLCQYQE 240

Query: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 248

[Close]

BLAST of MS015906 vs. NCBI nr
Match: XP_038882907.1 (uncharacterized protein LOC120074014 isoform X1 [Benincasa hispida])

HSP 1 Score: 420.6 bits (1080), Expect = 1.0e-113
Identity = 219/271 (80.81%), Postives = 235/271 (86.72%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60
           MSAGVCGKRVGFEEIFGSSSPTACSSAKR+RWS+FGSPTRS+FGSGP+DSASVLLQMFPG
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRTRWSTFGSPTRSDFGSGPDDSASVLLQMFPG 60

Query: 61  VGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQM 120
           VGAE                       V SFDDF+ARV+SATIGNCSTVPDER ATC+QM
Sbjct: 61  VGAE-----------------------VSSFDDFSARVNSATIGNCSTVPDERTATCSQM 120

Query: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180
           SHEK+E+ KDVSSA+ EGN M+GSKWVDMFVQEM  A+D+ DAR RA RILEAFEHNVT 
Sbjct: 121 SHEKIEEAKDVSSAIDEGNGMNGSKWVDMFVQEMMGAVDVGDARIRAARILEAFEHNVTV 180

Query: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240
            SRESEELKHASL+EHLQNLVNDNQILKRA+AIQHERNLEQEEK +EVHQLKHVLCQYQE
Sbjct: 181 HSRESEELKHASLREHLQNLVNDNQILKRAIAIQHERNLEQEEKAREVHQLKHVLCQYQE 240

Query: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 248

[Close]

BLAST of MS015906 vs. ExPASy TrEMBL
Match: A0A6J1CQ09 (uncharacterized protein LOC111013683 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111013683 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.2e-142
Identity = 267/271 (98.52%), Postives = 268/271 (98.89%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60
           MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60

Query: 61  VGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQM 120
           VGAE   RVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATC+QM
Sbjct: 61  VGAE---RVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCSQM 120

Query: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180
           SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA
Sbjct: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180

Query: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240
           FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE
Sbjct: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240

Query: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 268

[Close]

BLAST of MS015906 vs. ExPASy TrEMBL
Match: A0A6J1CS47 (uncharacterized protein LOC111013683 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111013683 PE=4 SV=1)

HSP 1 Score: 468.0 bits (1203), Expect = 2.7e-128
Identity = 247/271 (91.14%), Postives = 248/271 (91.51%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60
           MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60

Query: 61  VGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQM 120
           VGAE                       VPSFDDFNARVDSATIGNCSTVPDERAATC+QM
Sbjct: 61  VGAE-----------------------VPSFDDFNARVDSATIGNCSTVPDERAATCSQM 120

Query: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180
           SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA
Sbjct: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180

Query: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240
           FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE
Sbjct: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240

Query: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 248

[Close]

BLAST of MS015906 vs. ExPASy TrEMBL
Match: A0A0A0L259 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294930 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.7e-114
Identity = 224/272 (82.35%), Postives = 234/272 (86.03%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFG-SSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFP 60
           MSAGVCGKRVGFEEIFG SSSPTACSSAKRSRWS+FGSPTRS+FGSGP+DSASVLLQMFP
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSSPTACSSAKRSRWSTFGSPTRSDFGSGPDDSASVLLQMFP 60

Query: 61  GVGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQ 120
           GVGAE                       VPSFDDF+AR  SATIGNCSTVPDER ATC+Q
Sbjct: 61  GVGAE-----------------------VPSFDDFSARGHSATIGNCSTVPDERTATCSQ 120

Query: 121 MSHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVT 180
           MSHEK+E+ KDV S VAEGN MHGSKWVDMFVQEM  A+D+ DAR RA RILEAFEHNVT
Sbjct: 121 MSHEKIEEAKDVGSTVAEGNGMHGSKWVDMFVQEMAGAVDVGDARIRAARILEAFEHNVT 180

Query: 181 AFSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQ 240
             SRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKT+EVHQLKHVLCQYQ
Sbjct: 181 VNSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTREVHQLKHVLCQYQ 240

Query: 241 EQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           EQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 EQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 249

[Close]

BLAST of MS015906 vs. ExPASy TrEMBL
Match: A0A6J1INZ8 (uncharacterized protein LOC111478149 OS=Cucurbita maxima OX=3661 GN=LOC111478149 PE=4 SV=1)

HSP 1 Score: 421.0 bits (1081), Expect = 3.7e-114
Identity = 223/271 (82.29%), Postives = 232/271 (85.61%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFPG 60
           MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSG EDSASVLLQMFPG
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGHEDSASVLLQMFPG 60

Query: 61  VGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQM 120
           VGAE                       VPSFDDF+ARVDSATIGNCSTVPDER ATC+QM
Sbjct: 61  VGAE-----------------------VPSFDDFSARVDSATIGNCSTVPDERTATCSQM 120

Query: 121 SHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTA 180
           SHEKVE+  D  SA+ EG  MHGSKWVDMFVQEM +A+D+ DAR RA RILEAFEHNVT 
Sbjct: 121 SHEKVEEATDAGSAIGEGYGMHGSKWVDMFVQEMGSAVDVGDARIRAARILEAFEHNVTV 180

Query: 181 FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQE 240
            SRESEELKHASLK HLQ+LVNDNQILKRAVAIQHERNLEQEEKT+EVHQLKHVLCQYQE
Sbjct: 181 HSRESEELKHASLKGHLQSLVNDNQILKRAVAIQHERNLEQEEKTREVHQLKHVLCQYQE 240

Query: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF
Sbjct: 241 QIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 248

[Close]

BLAST of MS015906 vs. ExPASy TrEMBL
Match: A0A5D3DIN3 (CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00090 PE=4 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 2.4e-113
Identity = 224/272 (82.35%), Postives = 235/272 (86.40%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFG-SSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQMFP 60
           MSAGVCGKRVGFEEIFG SSSPTACSSAKRSRWS+FGSPTRS+FGSGP+DSASVLLQMFP
Sbjct: 1   MSAGVCGKRVGFEEIFGSSSSPTACSSAKRSRWSTFGSPTRSDFGSGPDDSASVLLQMFP 60

Query: 61  GVGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAATCNQ 120
           GVGAE                       VPSFDDF+AR DSATIGNCSTV DER ATC+Q
Sbjct: 61  GVGAE-----------------------VPSFDDFSARGDSATIGNCSTVLDERTATCSQ 120

Query: 121 MSHEKVEKDKDVSSAVAEGNAMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVT 180
           MSHEK+E+ KDVSSAVAEGN MHGSKWVDMFVQEM  A+D+ DAR RA RILEAFEHNVT
Sbjct: 121 MSHEKIEEAKDVSSAVAEGNGMHGSKWVDMFVQEMAGAVDVGDARIRAARILEAFEHNVT 180

Query: 181 AFSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQ 240
             SRESEELKHASLKEHLQ+LVNDNQILKRAVAIQHERNLEQEEKT+EVHQLKHVLCQYQ
Sbjct: 181 VNSRESEELKHASLKEHLQSLVNDNQILKRAVAIQHERNLEQEEKTREVHQLKHVLCQYQ 240

Query: 241 EQIQSLEVRNYTLNLHLQRAQSVSGHFHQDIF 272
           EQIQSLEVRNYTLNLHLQRAQSVSG FHQDIF
Sbjct: 241 EQIQSLEVRNYTLNLHLQRAQSVSGPFHQDIF 249

[Close]

BLAST of MS015906 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein )

HSP 1 Score: 127.9 bits (320), Expect = 1.3e-29
Identity = 97/284 (34.15%), Postives = 155/284 (54.58%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQ---- 60
           MSA VCGKR  FE++  +S P +       +   F S + S F      S+S+LL     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVS------KKLRCFSSSSSSRFSPPIPPSSSLLLDHLAA 60

Query: 61  MFPGVGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAAT 120
           +FP +  ++  R   +    + ++ AI  L     +  N   DSAT  N S V       
Sbjct: 61  IFPDMDKQILER--AIEECGDDLDSAIRCLNQLRLESANKNSDSAT--NQSPV------- 120

Query: 121 CNQMSHEKVEKDKDVSSAVAEGNAMH--GSKWVDMFVQEMTNAIDLDDARTRAGRILEAF 180
              +    VE  +   SA  E N ++  G++WV++FV+EM NA D+ DA+ RA R LEA 
Sbjct: 121 --VIQEPNVEPQQQGRSAKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEAL 180

Query: 181 EHNVTA----FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQ 240
           E ++ A     + ++ + ++  LK+ L+ +V +N +LKRAV  Q +R  E E++++E+  
Sbjct: 181 EKSINARTGTDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQH 240

Query: 241 LKHVLCQYQEQIQSLEVRNYTLNLHLQRAQ---SVSGHFHQDIF 272
           L+ ++ QYQEQ+++LEV NY L LHL++AQ   S+ G +H D+F
Sbjct: 241 LRQLVTQYQEQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 265

[Close]

BLAST of MS015906 vs. TAIR 10
Match: AT5G02510.1 (BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 166 Blast hits to 166 proteins in 31 species: Archae - 0; Bacteria - 4; Metazoa - 3; Fungi - 0; Plants - 142; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). )

HSP 1 Score: 125.6 bits (314), Expect = 6.3e-29
Identity = 69/133 (51.88%), Postives = 93/133 (69.92%), Query Frame = 0


Query: 143 GSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTAFSRESEELKHASLKEHLQNLVN 202
           G+KWVD  V EMT AI++DD R R   ILEA E  +   +  S++L++AS+KE LQ+L+N
Sbjct: 47  GAKWVDRLVSEMTKAINIDDMRRRVAVILEALESIIKKNTNASKKLEYASMKESLQSLIN 106

Query: 203 DNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQEQIQSLEVRNYTLNLHLQRAQ-- 262
           DNQILKR +A QH+R+ E EEK K+V  L+ V+ QYQEQ+  LE+ NY + LHLQR+Q  
Sbjct: 107 DNQILKRVIANQHQRSSENEEKAKQVLHLRGVVGQYQEQVHKLELSNYAMKLHLQRSQQQ 166

Query: 263 --SVSGHFHQDIF 272
             S SG+   DI+
Sbjct: 167 QTSFSGNLPPDIY 179

[Close]

BLAST of MS015906 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein )

HSP 1 Score: 125.6 bits (314), Expect = 6.3e-29
Identity = 96/284 (33.80%), Postives = 155/284 (54.58%), Query Frame = 0


Query: 1   MSAGVCGKRVGFEEIFGSSSPTACSSAKRSRWSSFGSPTRSEFGSGPEDSASVLLQ---- 60
           MSA VCGKR  FE++  +S P +       +   F S + S F      S+S+LL     
Sbjct: 1   MSAIVCGKRSLFEDLAAASPPVS------KKLRCFSSSSSSRFSPPIPPSSSLLLDHLAA 60

Query: 61  MFPGVGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSATIGNCSTVPDERAAT 120
           +FP +  ++  R   +    + ++ AI  L     +  N   DSAT  N S V       
Sbjct: 61  IFPDMDKQILER--AIEECGDDLDSAIRCLNQLRLESANKNSDSAT--NQSPV------- 120

Query: 121 CNQMSHEKVEKDKDVSSAVAEGNAMH--GSKWVDMFVQEMTNAIDLDDARTRAGRILEAF 180
              +  E   + +   SA  E N ++  G++WV++FV+EM NA D+ DA+ RA R LEA 
Sbjct: 121 ---VIQEPNVEPQQQGSAKEEPNVLNLDGTEWVELFVREMMNASDMKDAKARAARALEAL 180

Query: 181 EHNVTA----FSRESEELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQ 240
           E ++ A     + ++ + ++  LK+ L+ +V +N +LKRAV  Q +R  E E++++E+  
Sbjct: 181 EKSINARTGTDAMQNLQQENMMLKQQLEAIVQENSLLKRAVVTQQKRQRESEDQSQELQH 240

Query: 241 LKHVLCQYQEQIQSLEVRNYTLNLHLQRAQ---SVSGHFHQDIF 272
           L+ ++ QYQEQ+++LEV NY L LHL++AQ   S+ G +H D+F
Sbjct: 241 LRQLVTQYQEQLRTLEVNNYALTLHLKQAQQNSSIPGRYHPDVF 264

[Close]

BLAST of MS015906 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). )

HSP 1 Score: 97.1 bits (240), Expect = 2.4e-20
Identity = 90/282 (31.91%), Postives = 141/282 (50.00%), Query Frame = 0


Query: 1   MSAGVCG-KRVGFEEIFGSSSPTACSSAKRSR-WSSFGSPTRSEFGSGPEDSASVLLQMF 60
           MSA  CG KR  F++   +SSP    S+KR R +S   SP    + S P  S   L   F
Sbjct: 1   MSAVYCGTKRSYFDD---NSSP---PSSKRFRCFSPSNSPI---WSSPPSSSLDQLHSAF 60

Query: 61  PGVGAEVCCRVKTVLMNHNKIEDAIDVLQVPSFDDFNARVDSA-TIGNCSTVPDERAATC 120
           P +   V  ++      H  +   +      +  DFNA + S  +  +      E  A  
Sbjct: 61  PHIELTVASKI------HVSVAQVLVKALEDNGSDFNAAMKSLYSFASSEEKKAEELAAG 120

Query: 121 NQMSHEKVEKDKDVSSAVAEGN-AMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEH 180
              + E        + AV  GN    G  WV++ V+E+  +   DDA+ RA R+LEA E 
Sbjct: 121 GAATQE--------TDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEK 180

Query: 181 NVTAFSRESE----ELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLK 240
            ++A +RE      + +  ++++ ++ LV DN +LKRAVAIQHER    E+   ++  LK
Sbjct: 181 MLSARAREEAGNKFQEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLK 240

Query: 241 HVLCQYQEQIQSLEVRNYTLNLHLQRAQ---SVSGHFHQDIF 272
            ++ QYQE++++LEV NY L + LQ+ +   S+   F+ D+F
Sbjct: 241 QLVPQYQEKLRNLEVNNYALRMQLQQVEHGNSMPARFNPDVF 259

[Close]

BLAST of MS015906 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 93.2 bits (230), Expect = 3.4e-19
Identity = 56/148 (37.84%), Postives = 91/148 (61.49%), Query Frame = 0


Query: 132 SSAVAEGN-AMHGSKWVDMFVQEMTNAIDLDDARTRAGRILEAFEHNVTAFSRESE---- 191
           + AV  GN    G  WV++ V+E+  +   DDA+ RA R+LEA E  ++A +RE      
Sbjct: 101 TDAVCGGNPPTSGDDWVELLVREVLQSSGTDDAKVRAARVLEALEKMLSARAREEAGNKF 160

Query: 192 ELKHASLKEHLQNLVNDNQILKRAVAIQHERNLEQEEKTKEVHQLKHVLCQYQEQIQSLE 251
           + +  ++++ ++ LV DN +LKRAVAIQHER    E+   ++  LK ++ QYQE++++LE
Sbjct: 161 QEEKVAVQQQVETLVKDNTVLKRAVAIQHERQKALEDANHQLGLLKQLVPQYQEKLRNLE 220

Query: 252 VRNYTLNLHLQRAQ---SVSGHFHQDIF 272
           V NY L + LQ+ +   S+   F+ D+F
Sbjct: 221 VNNYALRMQLQQVEHGNSMPARFNPDVF 248

The following BLAST results are available for this feature:

BLAST of MS015906 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143875.1	8.8e-142	98.52	uncharacterized protein LOC111013683 isoform X1 [Momordica charantia]	[more]
XP_022143877.1	5.5e-128	91.14	uncharacterized protein LOC111013683 isoform X2 [Momordica charantia]	[more]
XP_004142078.1	3.5e-114	82.35	uncharacterized protein LOC101216078 [Cucumis sativus] >KGN54236.1 hypothetical ...	[more]
XP_022978050.1	7.7e-114	82.29	uncharacterized protein LOC111478149 [Cucurbita maxima]	[more]
XP_038882907.1	1.0e-113	80.81	uncharacterized protein LOC120074014 isoform X1 [Benincasa hispida]	[more]

BLAST of MS015906 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS015906 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQ09	4.2e-142	98.52	uncharacterized protein LOC111013683 isoform X1 OS=Momordica charantia OX=3673 G...	[more]
A0A6J1CS47	2.7e-128	91.14	uncharacterized protein LOC111013683 isoform X2 OS=Momordica charantia OX=3673 G...	[more]
A0A0A0L259	1.7e-114	82.35	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G294930 PE=4 SV=1	[more]
A0A6J1INZ8	3.7e-114	82.29	uncharacterized protein LOC111478149 OS=Cucurbita maxima OX=3661 GN=LOC111478149...	[more]
A0A5D3DIN3	2.4e-113	82.35	CUE domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc...	[more]

BLAST of MS015906 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G32440.3	1.3e-29	34.15	Ubiquitin system component Cue protein	[more]
AT5G02510.1	6.3e-29	51.88	BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue prote...	[more]
AT5G32440.1	6.3e-29	33.80	Ubiquitin system component Cue protein	[more]
AT1G80040.3	2.4e-20	31.91	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G80040.1	3.4e-19	37.84	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 212..232
None	No IPR available	COILS	Coil	Coil	coord: 183..210
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 19..46
None	No IPR available	PANTHER	PTHR31245	UBIQUITIN SYSTEM COMPONENT CUE PROTEIN	coord: 1..271
None	No IPR available	PANTHER	PTHR31245:SF16	UDP-GLUCOSE 6-DEHYDROGENASE	coord: 1..271
None	No IPR available	CDD	cd14279	CUE	coord: 48..86 e-value: 0.00327425 score: 32.8254

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015906.1	MS015906.1	mRNA