MS015868 (gene) Bitter gourd (TR) v1

Overview


Name	MS015868
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	thioredoxin-like protein AAED1, chloroplastic
Location	scaffold943_2: 540982 .. 542927 (-)
RNA-Seq Expression	MS015868
Synteny	MS015868

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCGACTCTATCCACTTCGCTAATTTCCAATACTGTTCTACCACTAAAGAATTCCAGCCAAAGTTCGCCGCGTGTTTTCTCCAATTCTTCTCATCCGAATCTTCGCTTTCATTCCAGTTTTTCGTACTGCAGCAATACTGTTAAATTCTCACCTCAGCGAACTGACGTCGTTGTCTCGGCCATATCTGGTTCTCCCGGTAAGTTAATTTGCTCTGTTTCTATTTATTTGTTTCGATTCTCTGTGCGTGTTGGCTTTCCTTTTATTTTTGCGGATTGTGGTTGATGAAATGTGACTTACAGGAATTGAATCGTATGTCGAAAGCGGGAATGCTAGGGATTTACTGGACTCGGTGAAGGTGTTTGATTTGAACGGAAATGGGATTCCGATTTCCGATCTGTGGAAAGACAGGAAAGCTGTTGTTGCATTTGCGCGTCATTTTGGGTACTTGCTTTGATAATTCTATCCAGCTGACAACAGTTCTTCATTTCTATTTATCGCTTTATAAGTACATGTTTATGCTTTGCTTTATCAGGTGTGTCTTTTGCCGAAAACGTGCCGACTATCTTGCCTCGAAGAAGGTAACTAATATCTTAGGTCTAATGGCGCATTTATGGGAAAAAACCTGCGTAGTCGATACAAATGTTGTTTGCTCTGAAATATTTTATATTTTATGACCTTTTGCCTTCTCAATCTTAAATCATATATGTGTAGTTTTAGTTTGTTCCGTTTGTACTGTTGGTTTATGACGATTTTATATCTAGCATCTCATTATTGATCTGTATATTACTTTAGACGTTTTCCTGTATAGGAATTGGTTAGCTTCCATCTGTATTGTTGACACTTTTTAATTTGACACCCTTGTGAGATCTGCCGATTGGAGGGAGAATGCATCAACCCTCCAATGGCTGCTGGAGGATCGAATGTATTACCACTGGTTCATTGGCTTTTCTGTTGTTGTTTGACTTTGGACTTATCTGAAGAAAAGACATACTTACAGCTCTTTCCCGACCGCTTTTTAATTGCAAAGTGAGAATTATTTGAATGTAGTCATATCACAACTTGATAGGGTTGCAGGATATATTGGATGCATCTGGTGTGGCTCTCGTGCTGATTGGACCCGGTAGCATCGATCAGGTATGAAATACACCCTTACTGCATTTTTGCAGAATGCTATATTGGAGGGATTTATTTAGGATGCTGTTCCAGTTCACGACACACTTTATTTGTCAAGCTGCTTTATTTCCATTTCTGCCTTTTGAGTTTTACTGTATGGTTATGGACCATGGATGGATTATCACTGCATCATTGATCTTAAGGATTACTCACATCAACAACTGTGTTTAAATTGGTTGATTCCTATTTACTGTTAGCAATTTGATGTAGGCAAAAGCATTCAGTGAGCAGACAAAATTTCAGGGAGGTAACTTTCTTCCATTATGGAGCAGTATTTAAGATTAAGAATGGAAACTAATGTACAGCGGTTCTGAATTAGTAATGGGTTGTTGAATTCCTTATGAATCATTGTTAATGTTAACCAGTAATGTATGTATTAAAATTTGGGATGTAGCATCTTTAAAGAACTGGGCTTCTGGGTTAATTATAATGTAAACTGGTCCCTTTCCGTGTTCATTTAATTGTAAACCATTGTGATCAAGTGATGGGAGTGTAATATTTGTTTCAGAAGTTTATGCTGATCCTGCTCATTCATCATATGAGGCTCTACAATTTGTCTCTGGAGTTACGACCACATTTACTCCCAAAGTATGTCTGGATCACAGTTTTGTAATAATTTTAAGAAGCAATATCAGCTTGTAGGTGCTAATTTGGTTGCTTGTATGACTTTTTAGGCGGGTCTCAAGATAATTCAACTATACATGGAAGGCTATCGGCAAGATTGGAATCTGTCTTTTCAAAAGGACACTGTGAGAAGAGGGGGCTGG

mRNA sequence

ATGGCGGCGACTCTATCCACTTCGCTAATTTCCAATACTGTTCTACCACTAAAGAATTCCAGCCAAAGTTCGCCGCGTGTTTTCTCCAATTCTTCTCATCCGAATCTTCGCTTTCATTCCAGTTTTTCGTACTGCAGCAATACTGTTAAATTCTCACCTCAGCGAACTGACGTCGTTGTCTCGGCCATATCTGGTTCTCCCGGAATTGAATCGTATGTCGAAAGCGGGAATGCTAGGGATTTACTGGACTCGGTGAAGGTGTTTGATTTGAACGGAAATGGGATTCCGATTTCCGATCTGTGGAAAGACAGGAAAGCTGTTGTTGCATTTGCGCGTCATTTTGGGTGTGTCTTTTGCCGAAAACGTGCCGACTATCTTGCCTCGAAGAAGGATATATTGGATGCATCTGGTGTGGCTCTCGTGCTGATTGGACCCGGTAGCATCGATCAGGCAAAAGCATTCAGTGAGCAGACAAAATTTCAGGGAGAAGTTTATGCTGATCCTGCTCATTCATCATATGAGGCTCTACAATTTGTCTCTGGAGTTACGACCACATTTACTCCCAAAGCGGGTCTCAAGATAATTCAACTATACATGGAAGGCTATCGGCAAGATTGGAATCTGTCTTTTCAAAAGGACACTGTGAGAAGAGGGGGCTGG

Coding sequence (CDS)

ATGGCGGCGACTCTATCCACTTCGCTAATTTCCAATACTGTTCTACCACTAAAGAATTCCAGCCAAAGTTCGCCGCGTGTTTTCTCCAATTCTTCTCATCCGAATCTTCGCTTTCATTCCAGTTTTTCGTACTGCAGCAATACTGTTAAATTCTCACCTCAGCGAACTGACGTCGTTGTCTCGGCCATATCTGGTTCTCCCGGAATTGAATCGTATGTCGAAAGCGGGAATGCTAGGGATTTACTGGACTCGGTGAAGGTGTTTGATTTGAACGGAAATGGGATTCCGATTTCCGATCTGTGGAAAGACAGGAAAGCTGTTGTTGCATTTGCGCGTCATTTTGGGTGTGTCTTTTGCCGAAAACGTGCCGACTATCTTGCCTCGAAGAAGGATATATTGGATGCATCTGGTGTGGCTCTCGTGCTGATTGGACCCGGTAGCATCGATCAGGCAAAAGCATTCAGTGAGCAGACAAAATTTCAGGGAGAAGTTTATGCTGATCCTGCTCATTCATCATATGAGGCTCTACAATTTGTCTCTGGAGTTACGACCACATTTACTCCCAAAGCGGGTCTCAAGATAATTCAACTATACATGGAAGGCTATCGGCAAGATTGGAATCTGTCTTTTCAAAAGGACACTGTGAGAAGAGGGGGCTGG

Protein sequence

MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVVSAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCRKRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVSGVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW

Homology

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BLAST of MS015868 vs. NCBI nr
Match: XP_022143710.1 (thioredoxin-like protein AAED1, chloroplastic [Momordica charantia])

HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSY SNTVKFSPQRTDVVV
Sbjct: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYSSNTVKFSPQRTDVVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS
Sbjct: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW
Sbjct: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 220

[Close]

BLAST of MS015868 vs. NCBI nr
Match: KAG6603698.1 (Thioredoxin-like protein AAED1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 365.5 bits (937), Expect = 3.1e-97
Identity = 186/220 (84.55%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLS S   ++  P + SSQ SPRVF NSSH NL F+SSFS+C+NTVK S +R  +VV
Sbjct: 1   MAATLSASPTYSSAAPQRKSSQ-SPRVFYNSSHRNLLFNSSFSHCNNTVKLSLERAGIVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SA+S SPGI SYVESGN  DLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAVSDSPGIGSYVESGNTADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKD+LDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEAL FVS
Sbjct: 121 KRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           G TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 GFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVSRGGW 219

[Close]

BLAST of MS015868 vs. NCBI nr
Match: XP_022950914.1 (thioredoxin-like protein AAED1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 364.8 bits (935), Expect = 5.3e-97
Identity = 186/220 (84.55%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLS S   ++  P + SSQ SPRVF NSSH NL F+SSFS+C+NTVK S +R  +VV
Sbjct: 1   MAATLSASPTYSSAAPQRKSSQ-SPRVFYNSSHRNLLFNSSFSHCNNTVKLSLKRAGIVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SA+S SPGI SYVESGN  DLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAVSDSPGIGSYVESGNIADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKD+LDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEAL FVS
Sbjct: 121 KRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           G TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 GFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVSRGGW 219

[Close]

BLAST of MS015868 vs. NCBI nr
Match: XP_023543103.1 (thioredoxin-like protein AAED1, chloroplastic isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 364.4 bits (934), Expect = 7.0e-97
Identity = 186/220 (84.55%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLS S   ++  P + SSQ SPRVF NSSH NL F+SSFS+C+NTVK S +R  +VV
Sbjct: 1   MAATLSASPTYSSAAPERKSSQ-SPRVFYNSSHRNLLFNSSFSHCNNTVKLSLKRAGIVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SA+S SPGI SYVESGN  DLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAVSDSPGIGSYVESGNIADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKD+LDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEAL FVS
Sbjct: 121 KRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           G TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 GFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVSRGGW 219

[Close]

BLAST of MS015868 vs. NCBI nr
Match: XP_038883589.1 (thioredoxin-like protein AAED1, chloroplastic [Benincasa hispida])

HSP 1 Score: 361.7 bits (927), Expect = 4.5e-96
Identity = 187/220 (85.00%), Postives = 196/220 (89.09%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLS SL  N+ L  + SSQ SPR   N  H NL F+SSFS+CS+TVKFS QRT VVV
Sbjct: 1   MAATLSASLTYNSALLQRKSSQ-SPRGLYNLRHRNLLFNSSFSHCSDTVKFSFQRTGVVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SAISGSP + SYVESGN  DLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAISGSPELGSYVESGNTADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKD+LDASGVALVLIGPGSIDQAKAF+EQTKFQGEVYADPAHSSYEAL FVS
Sbjct: 121 KRADYLASKKDLLDASGVALVLIGPGSIDQAKAFNEQTKFQGEVYADPAHSSYEALNFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           G TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 GFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVTRGGW 219

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BLAST of MS015868 vs. ExPASy Swiss-Prot
Match: Q9ZUU2 (Thioredoxin-like protein AAED1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At2g37240 PE=1 SV=2)

HSP 1 Score: 251.1 bits (640), Expect = 1.1e-65
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 42  FSYCSNTVKFSPQRTDVVVSAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLW 101
           +S  S+    S +R+ VVVSAI+G+    + +  G A D LD+VKV DL GN IPISDLW
Sbjct: 33  YSVKSHFRSVSLRRSAVVVSAITGASS-GAGIGKGTA-DSLDTVKVLDLRGNEIPISDLW 92

Query: 102 KDRKAVVAFARHFGCVFCRKRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQ 161
           KDRKAVVAFARHFGCV CRKRA YLA KKD++DASGVALVLIGPGSIDQA  F EQTKF+
Sbjct: 93  KDRKAVVAFARHFGCVLCRKRAAYLAEKKDVMDASGVALVLIGPGSIDQANTFVEQTKFK 152

Query: 162 GEVYADPAHSSYEALQFVSGVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           GEVYADP H+SYEAL+FVSGV+ TFTPKA +KI++ YMEGYRQDW LSF KDTV RGGW
Sbjct: 153 GEVYADPNHASYEALEFVSGVSVTFTPKAAMKILESYMEGYRQDWKLSFMKDTVERGGW 209

[Close]

BLAST of MS015868 vs. ExPASy Swiss-Prot
Match: B5X9L9 (Prostamide/prostaglandin F synthase OS=Salmo salar OX=8030 GN=prxl2b PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 4.7e-11
Identity = 42/131 (32.06%), Postives = 64/131 (48.85%), Query Frame = 0


Query: 90  LNGNGIPISDLWKDRKAVVAFARHFGCVFCRKRADYLASKKDILDASGVALVLIGPGSID 149
           ++G  + +  LW+D+  V+ F R FGC  CR  A  ++  +  L A G+ALV IGP    
Sbjct: 17  VSGESVELQSLWRDKPVVLFFLRRFGCQVCRWTAAEISKLEPDLTAHGIALVGIGPEETG 76

Query: 150 QAKAFSEQTKFQGEVYADPAHSSYEALQFVSGVTTTFTPKA-GLKIIQLYMEGYRQDWNL 209
             K F E   F+G++Y D     Y+ L F      +  P A G KI ++  +   Q    
Sbjct: 77  -LKEFKEGGFFKGDLYIDEKKQCYKDLGFKRYTALSVVPAALGKKIREVTTKAKAQGIQG 136

Query: 210 SFQKDTVRRGG 220
           +F  D ++ GG
Sbjct: 137 NFTGDLLQSGG 146

[Close]

BLAST of MS015868 vs. ExPASy Swiss-Prot
Match: Q28IJ3 (Prostamide/prostaglandin F synthase OS=Xenopus tropicalis OX=8364 GN=prxl2b PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 7.9e-11
Identity = 42/131 (32.06%), Postives = 61/131 (46.56%), Query Frame = 0


Query: 90  LNGNGIPISDLWKDRKAVVAFARHFGCVFCRKRADYLASKKDILDASGVALVLIGPGSID 149
           L+G  + +  LWK++  V+ F R FGC  CR  A  +   K   DA  + LV IGP  + 
Sbjct: 18  LSGEMVELKSLWKEKTTVLLFLRRFGCQICRWIAKDIGKLKASCDAHQIRLVGIGPEEVG 77

Query: 150 QAKAFSEQTKFQGEVYADPAHSSYEALQFVSGVTTTFTPKA-GLKIIQLYMEGYRQDWNL 209
             K F E   F GE+Y D +  SY+ L F      +  P A G K+  +  +        
Sbjct: 78  -LKEFLEGNFFNGELYIDESKESYKTLGFKRYSALSVIPAALGKKVRDIVTKANADGVQG 137

Query: 210 SFQKDTVRRGG 220
           +F  D ++ GG
Sbjct: 138 NFSGDLLQSGG 147

[Close]

BLAST of MS015868 vs. ExPASy Swiss-Prot
Match: Q148E0 (Peroxiredoxin-like 2C OS=Bos taurus OX=9913 GN=PRXL2C PE=2 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 2.3e-10
Identity = 38/140 (27.14%), Postives = 63/140 (45.00%), Query Frame = 0


Query: 87  VFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCRKRADYLAS-KKDILDASGVALVLIGP 146
           V D +G  +   +L+++R+A+V F RHF C  C++  + LA   K  L  + V L++IG 
Sbjct: 41  VLDASGRPVLFGELFRERRAIVVFVRHFLCYICKEYVEDLAKIPKSFLQEANVTLIVIGQ 100

Query: 147 GSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVSGVTTTFTPKAGLKIIQLYMEGYRQD 206
            S    + F + T +  E+Y DP    Y+ L    G     + ++      +     R  
Sbjct: 101 SSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRGEEIASSGQSPHVKSNILSGSIRSL 160

Query: 207 WN------LSFQKDTVRRGG 220
           W         FQ D  ++GG
Sbjct: 161 WRAVTGPLFDFQGDPAQQGG 180

[Close]

BLAST of MS015868 vs. ExPASy Swiss-Prot
Match: Q7RTV5 (Peroxiredoxin-like 2C OS=Homo sapiens OX=9606 GN=PRXL2C PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 6.7e-10
Identity = 32/96 (33.33%), Postives = 49/96 (51.04%), Query Frame = 0


Query: 87  VFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCRKRADYLAS-KKDILDASGVALVLIGP 146
           V D  G  +P   L+++R+AVV F RHF C  C++  + LA   +  L  + V L++IG 
Sbjct: 39  VLDARGQRVPFGALFRERRAVVVFVRHFLCYICKEYVEDLAKIPRSFLQEANVTLIVIGQ 98

Query: 147 GSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVSG 182
            S    + F + T +  E+Y DP    Y+ L    G
Sbjct: 99  SSYHHIEPFCKLTGYSHEIYVDPEREIYKRLGMKRG 134

[Close]

BLAST of MS015868 vs. ExPASy TrEMBL
Match: A0A6J1CPJ2 (thioredoxin-like protein AAED1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111013552 PE=4 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 5.9e-118
Identity = 219/220 (99.55%), Postives = 219/220 (99.55%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSY SNTVKFSPQRTDVVV
Sbjct: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYSSNTVKFSPQRTDVVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS
Sbjct: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW
Sbjct: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 220

[Close]

BLAST of MS015868 vs. ExPASy TrEMBL
Match: A0A6J1GH74 (thioredoxin-like protein AAED1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111453866 PE=4 SV=1)

HSP 1 Score: 364.8 bits (935), Expect = 2.6e-97
Identity = 186/220 (84.55%), Postives = 197/220 (89.55%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLS S   ++  P + SSQ SPRVF NSSH NL F+SSFS+C+NTVK S +R  +VV
Sbjct: 1   MAATLSASPTYSSAAPQRKSSQ-SPRVFYNSSHRNLLFNSSFSHCNNTVKLSLKRAGIVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SA+S SPGI SYVESGN  DLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAVSDSPGIGSYVESGNIADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKD+LDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEAL FVS
Sbjct: 121 KRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           G TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 GFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVSRGGW 219

[Close]

BLAST of MS015868 vs. ExPASy TrEMBL
Match: A0A6J1GG77 (thioredoxin-like protein AAED1, chloroplastic isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111453866 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 6.4e-96
Identity = 186/221 (84.16%), Postives = 197/221 (89.14%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLS S   ++  P + SSQ SPRVF NSSH NL F+SSFS+C+NTVK S +R  +VV
Sbjct: 1   MAATLSASPTYSSAAPQRKSSQ-SPRVFYNSSHRNLLFNSSFSHCNNTVKLSLKRAGIVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SA+S SPGI SYVESGN  DLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAVSDSPGIGSYVESGNIADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKK-DILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFV 180
           KRADYLASKK D+LDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEAL FV
Sbjct: 121 KRADYLASKKQDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNFV 180

Query: 181 SGVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           SG TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 SGFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVSRGGW 220

[Close]

BLAST of MS015868 vs. ExPASy TrEMBL
Match: A0A0A0L0Q9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293020 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.9e-95
Identity = 186/220 (84.55%), Postives = 195/220 (88.64%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MA TLS SL SN+ LP + SSQSS RVF      NL F+ SFS+CSN V+ S +RT VVV
Sbjct: 1   MAGTLSASLTSNSALPQRKSSQSS-RVFYIPRCRNLLFNYSFSHCSNIVRLSLRRTGVVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SAISGSPGI SYVESGN  DLL+SVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAISGSPGIGSYVESGNTADLLESVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKD+LDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEAL FVS
Sbjct: 121 KRADYLASKKDLLDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALNFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           G TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 GFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVTRGGW 219

[Close]

BLAST of MS015868 vs. ExPASy TrEMBL
Match: A0A6J1IR48 (thioredoxin-like protein AAED1, chloroplastic isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111477698 PE=4 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 4.1e-95
Identity = 184/220 (83.64%), Postives = 194/220 (88.18%), Query Frame = 0


Query: 1   MAATLSTSLISNTVLPLKNSSQSSPRVFSNSSHPNLRFHSSFSYCSNTVKFSPQRTDVVV 60
           MAATLS S    +  P + SSQ SPRVF N SH NL F+SSFS+ +NTVK S +R  VVV
Sbjct: 1   MAATLSASPTYGSAAPQRKSSQ-SPRVFYNPSHRNLLFNSSFSHYNNTVKLSLKRAGVVV 60

Query: 61  SAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120
           SA+S SPGI SYVESGN  DLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR
Sbjct: 61  SAVSDSPGIGSYVESGNIADLLDSVKVFDLNGNGIPISDLWKDRKAVVAFARHFGCVFCR 120

Query: 121 KRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQGEVYADPAHSSYEALQFVS 180
           KRADYLASKKD+LDASGVALVLIGPGSIDQAKAF+EQTKFQGEVYADPAHSSYEAL FVS
Sbjct: 121 KRADYLASKKDLLDASGVALVLIGPGSIDQAKAFNEQTKFQGEVYADPAHSSYEALNFVS 180

Query: 181 GVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           G TTTFTPKAGLKII+LYMEGYRQDWNLSFQKDTV RGGW
Sbjct: 181 GFTTTFTPKAGLKIIELYMEGYRQDWNLSFQKDTVSRGGW 219

[Close]

BLAST of MS015868 vs. TAIR 10
Match: AT2G37240.1 (Thioredoxin superfamily protein )

HSP 1 Score: 251.1 bits (640), Expect = 8.0e-67
Identity = 127/179 (70.95%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 42  FSYCSNTVKFSPQRTDVVVSAISGSPGIESYVESGNARDLLDSVKVFDLNGNGIPISDLW 101
           +S  S+    S +R+ VVVSAI+G+    + +  G A D LD+VKV DL GN IPISDLW
Sbjct: 33  YSVKSHFRSVSLRRSAVVVSAITGASS-GAGIGKGTA-DSLDTVKVLDLRGNEIPISDLW 92

Query: 102 KDRKAVVAFARHFGCVFCRKRADYLASKKDILDASGVALVLIGPGSIDQAKAFSEQTKFQ 161
           KDRKAVVAFARHFGCV CRKRA YLA KKD++DASGVALVLIGPGSIDQA  F EQTKF+
Sbjct: 93  KDRKAVVAFARHFGCVLCRKRAAYLAEKKDVMDASGVALVLIGPGSIDQANTFVEQTKFK 152

Query: 162 GEVYADPAHSSYEALQFVSGVTTTFTPKAGLKIIQLYMEGYRQDWNLSFQKDTVRRGGW 221
           GEVYADP H+SYEAL+FVSGV+ TFTPKA +KI++ YMEGYRQDW LSF KDTV RGGW
Sbjct: 153 GEVYADPNHASYEALEFVSGVSVTFTPKAAMKILESYMEGYRQDWKLSFMKDTVERGGW 209

The following BLAST results are available for this feature:

BLAST of MS015868 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143710.1	1.2e-117	99.55	thioredoxin-like protein AAED1, chloroplastic [Momordica charantia]	[more]
KAG6603698.1	3.1e-97	84.55	Thioredoxin-like protein AAED1, chloroplastic, partial [Cucurbita argyrosperma s...	[more]
XP_022950914.1	5.3e-97	84.55	thioredoxin-like protein AAED1, chloroplastic isoform X2 [Cucurbita moschata]	[more]
XP_023543103.1	7.0e-97	84.55	thioredoxin-like protein AAED1, chloroplastic isoform X2 [Cucurbita pepo subsp. ...	[more]
XP_038883589.1	4.5e-96	85.00	thioredoxin-like protein AAED1, chloroplastic [Benincasa hispida]	[more]

BLAST of MS015868 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ZUU2	1.1e-65	70.95	Thioredoxin-like protein AAED1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN...	[more]
B5X9L9	4.7e-11	32.06	Prostamide/prostaglandin F synthase OS=Salmo salar OX=8030 GN=prxl2b PE=2 SV=1	[more]
Q28IJ3	7.9e-11	32.06	Prostamide/prostaglandin F synthase OS=Xenopus tropicalis OX=8364 GN=prxl2b PE=2...	[more]
Q148E0	2.3e-10	27.14	Peroxiredoxin-like 2C OS=Bos taurus OX=9913 GN=PRXL2C PE=2 SV=1	[more]
Q7RTV5	6.7e-10	33.33	Peroxiredoxin-like 2C OS=Homo sapiens OX=9606 GN=PRXL2C PE=2 SV=1	[more]

BLAST of MS015868 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CPJ2	5.9e-118	99.55	thioredoxin-like protein AAED1, chloroplastic OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1GH74	2.6e-97	84.55	thioredoxin-like protein AAED1, chloroplastic isoform X2 OS=Cucurbita moschata O...	[more]
A0A6J1GG77	6.4e-96	84.16	thioredoxin-like protein AAED1, chloroplastic isoform X1 OS=Cucurbita moschata O...	[more]
A0A0A0L0Q9	1.9e-95	84.55	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G293020 PE=4 SV=1	[more]
A0A6J1IR48	4.1e-95	83.64	thioredoxin-like protein AAED1, chloroplastic isoform X2 OS=Cucurbita maxima OX=...	[more]

BLAST of MS015868 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37240.1	8.0e-67	70.95	Thioredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032801	Peroxiredoxin-like 2A/B/C	PFAM	PF13911	AhpC-TSA_2	coord: 126..219 e-value: 8.4E-13 score: 48.4
IPR032801	Peroxiredoxin-like 2A/B/C	PANTHER	PTHR28630	FAMILY NOT NAMED	coord: 1..220
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 80..206 e-value: 8.6E-11 score: 43.6
None	No IPR available	PANTHER	PTHR28630:SF11	THIOREDOXIN-LIKE PROTEIN AAED1, CHLOROPLASTIC	coord: 1..220
None	No IPR available	CDD	cd02970	PRX_like2	coord: 85..208 e-value: 7.86464E-32 score: 111.682
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 82..186

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015868.1	MS015868.1	mRNA