MS015841 (gene) Bitter gourd (TR) v1

Overview


Name	MS015841
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CASP-like protein
Location	scaffold943_2: 353796 .. 356185 (+)
RNA-Seq Expression	MS015841
Synteny	MS015841

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACGTGAGCCGGCCATCGGTGCATCCAGTGGAAGCGCCGCCGCTGACGGAGGGAGCGGCACACAATGCGCCGAGAGTCAGGATGAAGGATGTGCACGGCATGCCTGGTACACTAGGTGGACTTGCTCTCCGTCTCCTTCAGTTCATTTTTGCTGCAGTTTCTCTCTGTGTTATGACCACCACCAGTGACTTCCCGTCCGTCACGGCGTTTAAGTACGTAATTCTTGAATTTCTGTCTGATACTCTCAGGTTCTATGTAATTTTTTGATATTGTCGTAGTAATGATCTTCAAATATTCGCTTTGAAGTATGGATGCTGATTAAATTAAGACATATTTAGCGTGATTTGGACGTCGTTGAGAATATTTCATCCATAAAGAATCAGAAAACATTTATCGTTTCTTAGAGGAACAAAGAAAGCTATAGCCGAACCTAAAAATGCGCGTTCCTTCGTCTTGTCTTGCTGGAGATTTCGCTCAAGGAAACTTGTTTGGTCATTGTGCTTTGTCAAATATATTTAGCAGTCAACTTTTTTATTTCTGTTGATGGTGGTAGCAAGCAGTAACTTGTATTCTTTATCCCCTAGGTTTTGGTTTTAGCTTTTAAATATGTTGTGAGCAGTGATGGAGCAATCGAGAATGGTGGGAAGTACGTATTTACATGTCGAAATTAGAAAACTTGTCGCCTGGGATTTTATTATTATTAGTGTTGTATTATTTTCCCAACAGAGTGGATAAGAGATACACCTATTGAAATCTGTATCTTGTTTCAGAACATAGCCAATTGGTTTTTGGTTGATTCTTTATTCCATAATTTCATTTCCAATGAAAAGTTTGTTTTTTTTGTACGTTTCATGTCAGTTCCAACAACACCGTCACACCATCTGTGATCAAGATACTTTTCTTTAAAATTTTAATTTCTAGTTTATAGAATTTGTTCTGTTTTTCTTTTCGTAATTTTCCTGTTTATTTGGTTACTACCAATATACGTTTGTTGTAACCTTGCTTGGCTTGGTTTTTAAGAGTTGAGAGGATGTCTCATTCTCTTCTCTCGTACTTTTCTCTCTGATGCCAAAAAATTACTCTCTTTTAAAAGAAGTTGTCTGTTGGATAATGTTATTCATGGTTAAGAGTTGTGATTTTAAGATGTGCTATATGTTTGATCCTTCAACTTTATGTTCAATTATTCATAATGGAATTATTATCACTTTACATTTCGTCTCAGATATCTTGTTGCTGCTGTAAGCTTGCAATGCTTGTGGAGCTTTTTATTGGCAGTAGTTGATGCATATGCCTTGTTAGTTAGACGAAGCTTGCGGAACTGCACAATAGTTGGTTTGTTCACTGTCGGTGATGCGGTAAGAATATTTTGCTTGCCAGGCTTCCAGTCTCACATTATAGATCTGTTTGCATATAGATTTGTAGTCTGATATGTCATGTGCAATCCAGGTGCTTGTTAAAGTCGCACGATTCTCATAAAATAGGCTGCACAATCTGAGATTGACATTTAGTTTTAATGGATGCTAAGGTTATGTTTCATTGTTTGATTTGCCTATCTGCAGATTGTAATAGATTTAAGCATCCCATTGAAATGCTGAGACTACCATTTTGAAGGAATGAGCCTGATATTTTATTCTAGTCTTTGTTATAGTAATGTTTTTTATTGATATGTTATTCTTATTAATACTTTTTGGTAATTATAATAGTATAATATTTATTCACTTAACATAATAATGGTTTTTTTTTATTAGAAACCGGTCTTTCATTCACAGAAATGAAAATATATATAGGGGCATACAAAAAACAGTCTAGCTAAAGAACACCACTTGAAAAAAGAGGCTCCAATCCAAAAGAATAACACCTAAGTCCCAACTGATAATTACAAAAACTCTTAGAAACCGACCCCACATAGAAGTATTAAACCTAACAAGCTCCTAAACATCCTCCCTTAATCTCTCCACCCTTAAAAGTTCTATTGTTTCTCTCCAACCAAAATCCCTACAAAGTAGAAAGAACACAATCTTGCCACAAGAAATTCAACATAATTATGTTAAATTCAATGAATGTTGCTATAATAAAAACCAATTTGTTAAATCAATATAACTTTACTTATTAAATTTCTTCAGTTCAATTAATATTTATCATTGTTAATAGAAAAGGTGTTAGTGATGTTATTAACAACGAACTGTGTCCCCCTGCAGATTACATCCACCCTTACATTTTCTTCTGCATGTTCATCAGCTGGGATTACTGTCCTCATTGGCAATGATCTTGATAAGTGTGGTGTAAACCACTGCGCGCAGTTCGAGTCCGCCACTGCAATGGCCTTCCTTAGCTGGTTTGCTGTTTCACCTTCATTTCTCTTGAACTTCTGGTCACTGGCTTCTCGG

mRNA sequence

ATGAACGTGAGCCGGCCATCGGTGCATCCAGTGGAAGCGCCGCCGCTGACGGAGGGAGCGGCACACAATGCGCCGAGAGTCAGGATGAAGGATGTGCACGGCATGCCTGGTACACTAGGTGGACTTGCTCTCCGTCTCCTTCAGTTCATTTTTGCTGCAGTTTCTCTCTGTGTTATGACCACCACCAGTGACTTCCCGTCCGTCACGGCGTTTAAATATCTTGTTGCTGCTGTAAGCTTGCAATGCTTGTGGAGCTTTTTATTGGCAGTAGTTGATGCATATGCCTTGTTAGTTAGACGAAGCTTGCGGAACTGCACAATAGTTGGTTTGTTCACTGTCGGTGATGCGATTACATCCACCCTTACATTTTCTTCTGCATGTTCATCAGCTGGGATTACTGTCCTCATTGGCAATGATCTTGATAAGTGTGGTGTAAACCACTGCGCGCAGTTCGAGTCCGCCACTGCAATGGCCTTCCTTAGCTGGTTTGCTGTTTCACCTTCATTTCTCTTGAACTTCTGGTCACTGGCTTCTCGG

Coding sequence (CDS)

ATGAACGTGAGCCGGCCATCGGTGCATCCAGTGGAAGCGCCGCCGCTGACGGAGGGAGCGGCACACAATGCGCCGAGAGTCAGGATGAAGGATGTGCACGGCATGCCTGGTACACTAGGTGGACTTGCTCTCCGTCTCCTTCAGTTCATTTTTGCTGCAGTTTCTCTCTGTGTTATGACCACCACCAGTGACTTCCCGTCCGTCACGGCGTTTAAATATCTTGTTGCTGCTGTAAGCTTGCAATGCTTGTGGAGCTTTTTATTGGCAGTAGTTGATGCATATGCCTTGTTAGTTAGACGAAGCTTGCGGAACTGCACAATAGTTGGTTTGTTCACTGTCGGTGATGCGATTACATCCACCCTTACATTTTCTTCTGCATGTTCATCAGCTGGGATTACTGTCCTCATTGGCAATGATCTTGATAAGTGTGGTGTAAACCACTGCGCGCAGTTCGAGTCCGCCACTGCAATGGCCTTCCTTAGCTGGTTTGCTGTTTCACCTTCATTTCTCTTGAACTTCTGGTCACTGGCTTCTCGG

Protein sequence

MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMTTTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITSTLTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR

Homology

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BLAST of MS015841 vs. NCBI nr
Match: XP_022143989.1 (CASP-like protein 5A2 [Momordica charantia])

HSP 1 Score: 343.6 bits (880), Expect = 1.0e-90
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRPSVHPVEAPPLT+GAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVM 
Sbjct: 1   MNVSRPSVHPVEAPPLTDGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST
Sbjct: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFSSACSSAGITVLIGNDLDKCGVNHC QFESATAMAFLSWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCVQFESATAMAFLSWFAVSPSFLLNFWSLASR 179

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BLAST of MS015841 vs. NCBI nr
Match: XP_004143253.1 (CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like protein 5A2 [Cucumis melo] >KAA0047255.1 CASP-like protein 5A1 [Cucumis melo var. makuwa] >KGN48158.1 hypothetical protein Csa_003346 [Cucumis sativus] >TYK05890.1 CASP-like protein 5A1 [Cucumis melo var. makuwa])

HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 164/179 (91.62%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRPSVHPVEAPPLTEGA HN PRVRMKDV GMPGTLGGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF LAVVDAYALLVRRSLRNC+IVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDL+KCGVNHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. NCBI nr
Match: XP_038881202.1 (CASP-like protein 5A2 [Benincasa hispida])

HSP 1 Score: 325.9 bits (834), Expect = 2.2e-85
Identity = 165/179 (92.18%), Postives = 171/179 (95.53%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRPSVHPVEAPPLTEGA HN PRVRMKDV GMPGTLGGLALRLLQFIFAAVSLCVM 
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF L VVDAYALLVRRSLRNC+IVGLFT GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLGVVDAYALLVRRSLRNCSIVGLFTFGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDL+KCGVNHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. NCBI nr
Match: KAG7027268.1 (CASP-like protein 5A1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 163/179 (91.06%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRP+VHPVEAPP+TEGA HNAPR RMKDV GMPGTLGGLALRLLQFIFAAVSLCVM+
Sbjct: 1   MNVSRPAVHPVEAPPVTEGAVHNAPRGRMKDVQGMPGTLGGLALRLLQFIFAAVSLCVMS 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF LA+VDAYALLVRRSLRNCT+VGLF VGDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCTMVGLFIVGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDLDKCG+NHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLDKCGLNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. NCBI nr
Match: XP_022963088.1 (CASP-like protein 5A2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 324.7 bits (831), Expect = 5.0e-85
Identity = 163/179 (91.06%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRP+VHPVEAPP+TEGA HNAPR RMKDV GMPGTLGGLALRLLQFIFAAVSLCVM+
Sbjct: 1   MNVSRPAVHPVEAPPVTEGAVHNAPRGRMKDVQGMPGTLGGLALRLLQFIFAAVSLCVMS 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF LA+VDAYALLVRRSLRNCT+VGLF VGDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCTMVGLFIVGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDLDKCG+NHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLDKCGLNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

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BLAST of MS015841 vs. ExPASy Swiss-Prot
Match: P0DI70 (CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1)

HSP 1 Score: 242.7 bits (618), Expect = 3.3e-63
Identity = 125/179 (69.83%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MN S P+VHPVEAPP      H+APRVRMKD  GMPGTLGGLALRL QF FA V+  +M 
Sbjct: 1   MNPSHPAVHPVEAPPTD---VHHAPRVRMKDYQGMPGTLGGLALRLGQFCFAVVAFSIML 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           +T DF +VTAF YLVAA  LQCLWS  LAV+D YALLV+RSLRN  +V LF VGD +T+T
Sbjct: 61  STDDFSTVTAFCYLVAATVLQCLWSLALAVIDGYALLVKRSLRNSLVVSLFVVGDGVTAT 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTF++AC+SAGITVLIGNDL +C  NHC ++E+ATAMAFLSWF VSPSFLL FW LASR
Sbjct: 121 LTFAAACASAGITVLIGNDLRECDQNHCGKYETATAMAFLSWFMVSPSFLLTFWLLASR 176

[Close]

BLAST of MS015841 vs. ExPASy Swiss-Prot
Match: Q9SKN3 (CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 7.3e-63
Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVS  SVHPVE PP       N PRVRM D+ GMPGTL GLALR  QF+FAA +LCVM 
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           +TSDFPSVTAF YLVAA  LQ LWS  LA+VD YA++V+RSL+N  +V LF +GD +TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTF++AC+SAGITVLI NDL+ C  NHC QFE++TA+AF+SWFA  PSFL NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of MS015841 vs. ExPASy Swiss-Prot
Match: Q10Q78 (CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 PE=2 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.5e-60
Identity = 126/179 (70.39%), Postives = 143/179 (79.89%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPR-VRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVM 60
           M  SRP+VHPVEAPP  + A    PR V MKD+ GMPGT GGL LRL QF FAAV+L VM
Sbjct: 1   MFASRPAVHPVEAPPPPDPA--EQPRGVLMKDLPGMPGTAGGLGLRLAQFAFAAVALAVM 60

Query: 61  TTTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITS 120
            +T+DFPSVT+F +LVAA  LQCLWSF LA+VD YALLV+R LRN   V LF +GD IT+
Sbjct: 61  ASTNDFPSVTSFCFLVAAAILQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITA 120

Query: 121 TLTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLAS 179
            LTFS+AC+S+GITVLI NDLD C  NHCA FESATAMAFLSWFA+SPSFLLNFWS+AS
Sbjct: 121 ALTFSAACASSGITVLIDNDLDLCSENHCASFESATAMAFLSWFALSPSFLLNFWSMAS 177

[Close]

BLAST of MS015841 vs. ExPASy Swiss-Prot
Match: P0DI68 (CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1)

HSP 1 Score: 228.4 bits (581), Expect = 6.4e-59
Identity = 118/179 (65.92%), Postives = 140/179 (78.21%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           M  SRP+VHPVEAPP T+        V MKD+ GMPGT GGL LR+ QF+FA V+L VM 
Sbjct: 1   MFASRPAVHPVEAPPPTD-PVEQPTGVLMKDLPGMPGTAGGLGLRVAQFVFAGVALAVMA 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           +TSDFPSVTAF YLVAA  +QCLWSF LA+VD YALLV+R LRN   V LF +GD IT+ 
Sbjct: 61  STSDFPSVTAFCYLVAATIMQCLWSFSLAIVDIYALLVKRCLRNRRAVCLFAIGDGITAA 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTF +ACSSAGITVLI NDL+ C  NHC  F++ATA+AF+SWFA++PSFLLNFWS+A+R
Sbjct: 121 LTFGAACSSAGITVLIDNDLNICAENHCGSFKTATALAFMSWFALTPSFLLNFWSMAAR 178

[Close]

BLAST of MS015841 vs. ExPASy Swiss-Prot
Match: Q6NPF8 (CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 3.2e-58
Identity = 122/179 (68.16%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGA-AHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVM 60
           MNVSRP++HPV+A P+   A A + P VRMKDV GMPGT GGL LRL QF+ A +S+ VM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  TTTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITS 120
            TTSDF S TAF  LV AVSLQ LWS  L ++DAYALLVRRSLRN ++V  FT+GD +TS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLAS 179
           TLTF++A +SAGITVLI NDL +C VNHC +FE+ATAMAF+SWFAVSPSF+LNFWSLA+
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of MS015841 vs. ExPASy TrEMBL
Match: A0A6J1CQZ4 (CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111013770 PE=3 SV=1)

HSP 1 Score: 343.6 bits (880), Expect = 5.0e-91
Identity = 176/179 (98.32%), Postives = 177/179 (98.88%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRPSVHPVEAPPLT+GAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVM 
Sbjct: 1   MNVSRPSVHPVEAPPLTDGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMA 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST
Sbjct: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFSSACSSAGITVLIGNDLDKCGVNHC QFESATAMAFLSWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCVQFESATAMAFLSWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. ExPASy TrEMBL
Match: A0A5A7U0S9 (CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00210 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.3e-86
Identity = 164/179 (91.62%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRPSVHPVEAPPLTEGA HN PRVRMKDV GMPGTLGGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF LAVVDAYALLVRRSLRNC+IVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDL+KCGVNHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. ExPASy TrEMBL
Match: A0A0A0KF35 (CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.3e-86
Identity = 164/179 (91.62%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRPSVHPVEAPPLTEGA HN PRVRMKDV GMPGTLGGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF LAVVDAYALLVRRSLRNC+IVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDL+KCGVNHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. ExPASy TrEMBL
Match: A0A1S3BLL2 (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.3e-86
Identity = 164/179 (91.62%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRPSVHPVEAPPLTEGA HN PRVRMKDV GMPGTLGGLALRLLQF+FA VSLCVM+
Sbjct: 1   MNVSRPSVHPVEAPPLTEGAVHNGPRVRMKDVQGMPGTLGGLALRLLQFVFATVSLCVMS 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF LAVVDAYALLVRRSLRNC+IVGLFT+GDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAVVDAYALLVRRSLRNCSIVGLFTLGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDL+KCGVNHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLNKCGVNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. ExPASy TrEMBL
Match: A0A6J1HGQ7 (CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463392 PE=3 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 2.4e-85
Identity = 163/179 (91.06%), Postives = 173/179 (96.65%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVSRP+VHPVEAPP+TEGA HNAPR RMKDV GMPGTLGGLALRLLQFIFAAVSLCVM+
Sbjct: 1   MNVSRPAVHPVEAPPVTEGAVHNAPRGRMKDVQGMPGTLGGLALRLLQFIFAAVSLCVMS 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           TTSDFPSVTAF+YLVAAV LQCLWSF LA+VDAYALLVRRSLRNCT+VGLF VGDA+TST
Sbjct: 61  TTSDFPSVTAFRYLVAAVGLQCLWSFSLAIVDAYALLVRRSLRNCTMVGLFIVGDAVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTFS+ACSSAGITVLIGNDLDKCG+NHCAQFESATAMAF+SWFAVSPSFLLNFWSLASR
Sbjct: 121 LTFSAACSSAGITVLIGNDLDKCGLNHCAQFESATAMAFISWFAVSPSFLLNFWSLASR 179

[Close]

BLAST of MS015841 vs. TAIR 10
Match: AT2G28370.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 241.5 bits (615), Expect = 5.2e-64
Identity = 121/179 (67.60%), Postives = 141/179 (78.77%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGAAHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVMT 60
           MNVS  SVHPVE PP       N PRVRM D+ GMPGTL GLALR  QF+FAA +LCVM 
Sbjct: 1   MNVSHASVHPVEDPPAAATEVENPPRVRMDDMEGMPGTLLGLALRFFQFLFAAAALCVMA 60

Query: 61  TTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITST 120
           +TSDFPSVTAF YLVAA  LQ LWS  LA+VD YA++V+RSL+N  +V LF +GD +TST
Sbjct: 61  STSDFPSVTAFCYLVAATGLQSLWSLALAMVDVYAIMVKRSLQNRRLVSLFAIGDGVTST 120

Query: 121 LTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLASR 180
           LTF++AC+SAGITVLI NDL+ C  NHC QFE++TA+AF+SWFA  PSFL NFWSLASR
Sbjct: 121 LTFAAACASAGITVLIDNDLNSCAQNHCVQFETSTALAFISWFAALPSFLFNFWSLASR 179

[Close]

BLAST of MS015841 vs. TAIR 10
Match: AT2G37200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 226.1 bits (575), Expect = 2.2e-59
Identity = 122/179 (68.16%), Postives = 145/179 (81.01%), Query Frame = 0


Query: 1   MNVSRPSVHPVEAPPLTEGA-AHNAPRVRMKDVHGMPGTLGGLALRLLQFIFAAVSLCVM 60
           MNVSRP++HPV+A P+   A A + P VRMKDV GMPGT GGL LRL QF+ A +S+ VM
Sbjct: 2   MNVSRPAIHPVDALPVAPTAGAIDRPPVRMKDVQGMPGTTGGLILRLSQFVPALISVSVM 61

Query: 61  TTTSDFPSVTAFKYLVAAVSLQCLWSFLLAVVDAYALLVRRSLRNCTIVGLFTVGDAITS 120
            TTSDF S TAF  LV AVSLQ LWS  L ++DAYALLVRRSLRN ++V  FT+GD +TS
Sbjct: 62  VTTSDFRSATAFCCLVLAVSLQSLWSLSLFIIDAYALLVRRSLRNHSVVQCFTIGDGVTS 121

Query: 121 TLTFSSACSSAGITVLIGNDLDKCGVNHCAQFESATAMAFLSWFAVSPSFLLNFWSLAS 179
           TLTF++A +SAGITVLI NDL +C VNHC +FE+ATAMAF+SWFAVSPSF+LNFWSLA+
Sbjct: 122 TLTFAAASASAGITVLI-NDLGQCNVNHCTRFETATAMAFISWFAVSPSFILNFWSLAT 179

[Close]

BLAST of MS015841 vs. TAIR 10
Match: AT3G23200.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 127.9 bits (320), Expect = 8.3e-30
Identity = 72/151 (47.68%), Postives = 99/151 (65.56%), Query Frame = 0


Query: 29  MKDVHGMPGTLGGLALRLLQFIFAAVSLCVMTTTSDFPSVTAFKYLVAAVSLQCLWSFLL 88
           M D+ G PGTL GL LR+ Q +FAA S+  M T+  F S TAF YL+AA+ LQ +WSF L
Sbjct: 1   MIDIPGTPGTLTGLVLRISQCVFAAGSISYMVTSGGFFSFTAFCYLIAAMGLQVIWSFGL 60

Query: 89  AVVDAYALLVRRSLRNCTIVGLFTVGDAITSTLTFSSACSSAGITVLIGNDLDKCGVN-H 148
           A++D +AL+ +++L +  +V LF VGD +TSTL+ + A SSAGITVL   DL  C     
Sbjct: 61  AILDTFALVRKKTLLSPVLVSLFVVGDWVTSTLSLAGASSSAGITVLYFGDLGSCSFEAE 120

Query: 149 CAQFESATAMAFLSWFAVSPSFLLNFWSLAS 179
           C +++ + A+AFL W  ++ S L   W LAS
Sbjct: 121 CWKYQLSVALAFLCWITIAVSSLTTLWLLAS 151

[Close]

BLAST of MS015841 vs. TAIR 10
Match: AT3G53850.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 117.5 bits (293), Expect = 1.1e-26
Identity = 67/153 (43.79%), Postives = 97/153 (63.40%), Query Frame = 0


Query: 29  MKDVHGMPGTLGGLALRLLQFIFAAVSLCVMTTTSDFPSVTAFKYLVAAVSLQCLWSFLL 88
           MK + G PGT+ GL LR+ Q   AA S+ VM +  +F   TAF YL+A++ LQ LWSF L
Sbjct: 1   MKKLLGGPGTVCGLLLRIGQCASAAASIGVMVSAKEFSVHTAFCYLIASMGLQLLWSFGL 60

Query: 89  AVVDAYALLVRRSLRNCTIVGLFTVGDAITSTLTFSSACSSAGITVLIGNDLDKCGVNH- 148
           A +D YAL  ++ L+N  +V LF VGD +T+ L+ ++ACSSAG+ VL   D+  C     
Sbjct: 61  ACLDVYALRGKKDLQNPILVSLFVVGDWVTAMLSLAAACSSAGVVVLYEKDIKYCNTQSQ 120

Query: 149 --CAQFESATAMAFLSWFAVSPSFLLNFWSLAS 179
             C ++E A A++F++W  ++ S  + FW LAS
Sbjct: 121 YPCLRYEVAVALSFVTWIQIAVSSHVTFWILAS 153

[Close]

BLAST of MS015841 vs. TAIR 10
Match: AT5G02060.1 (Uncharacterised protein family (UPF0497) )

HSP 1 Score: 112.8 bits (281), Expect = 2.8e-25
Identity = 65/151 (43.05%), Postives = 94/151 (62.25%), Query Frame = 0


Query: 29  MKDVHGMPGTLGGLALRLLQFIFAAVSLCVMTTTSDFPSVTAFKYLVAAVSLQCLWSFLL 88
           MK + G PGT+ GL LRL Q   AA S+ VM ++ DF + TAF +LVA++ LQ +WSF L
Sbjct: 1   MKKMIGSPGTMSGLILRLGQCATAAASIGVMVSSYDFSNYTAFCFLVASMGLQLIWSFGL 60

Query: 89  AVVDAYALLVRRSLRNCTIVGLFTVGDAITSTLTFSSACSSAGITVLIGNDLDKCGVN-- 148
           A +D YA+  +  LR+  ++ LFTVGD +T+ L  ++ACSSAG+TVL   D + C     
Sbjct: 61  ACLDVYAIRRKSDLRSPILLSLFTVGDWVTALLALAAACSSAGVTVLFTKDTEFCRQQPA 120

Query: 149 -HCAQFESATAMAFLSWFAVSPSFLLNFWSL 177
             C +F+ +  ++F +WF  + S    FW L
Sbjct: 121 LSCDRFQISVGLSFFNWFLAAISSHTMFWIL 151

The following BLAST results are available for this feature:

BLAST of MS015841 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143989.1	1.0e-90	98.32	CASP-like protein 5A2 [Momordica charantia]	[more]
XP_004143253.1	1.3e-85	91.62	CASP-like protein 5A2 [Cucumis sativus] >XP_008449244.1 PREDICTED: CASP-like pro...	[more]
XP_038881202.1	2.2e-85	92.18	CASP-like protein 5A2 [Benincasa hispida]	[more]
KAG7027268.1	5.0e-85	91.06	CASP-like protein 5A1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022963088.1	5.0e-85	91.06	CASP-like protein 5A2 isoform X1 [Cucurbita moschata]	[more]

BLAST of MS015841 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0DI70	3.3e-63	69.83	CASP-like protein 5A1 OS=Ginkgo biloba OX=3311 GN=gba_locus_10451 PE=3 SV=1	[more]
Q9SKN3	7.3e-63	67.60	CASP-like protein 5A2 OS=Arabidopsis thaliana OX=3702 GN=At2g28370 PE=2 SV=1	[more]
Q10Q78	1.5e-60	70.39	CASP-like protein 5A1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0206600 P...	[more]
P0DI68	6.4e-59	65.92	CASP-like protein 5A1 OS=Brachypodium distachyon OX=15368 PE=2 SV=1	[more]
Q6NPF8	3.2e-58	68.16	CASP-like protein 5A1 OS=Arabidopsis thaliana OX=3702 GN=At2g37200 PE=2 SV=1	[more]

BLAST of MS015841 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQZ4	5.0e-91	98.32	CASP-like protein OS=Momordica charantia OX=3673 GN=LOC111013770 PE=3 SV=1	[more]
A0A5A7U0S9	6.3e-86	91.62	CASP-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold432G00...	[more]
A0A0A0KF35	6.3e-86	91.62	CASP-like protein OS=Cucumis sativus OX=3659 GN=Csa_6G445220 PE=3 SV=1	[more]
A0A1S3BLL2	6.3e-86	91.62	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103491180 PE=3 SV=1	[more]
A0A6J1HGQ7	2.4e-85	91.06	CASP-like protein OS=Cucurbita moschata OX=3662 GN=LOC111463392 PE=3 SV=1	[more]

BLAST of MS015841 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28370.1	5.2e-64	67.60	Uncharacterised protein family (UPF0497)	[more]
AT2G37200.1	2.2e-59	68.16	Uncharacterised protein family (UPF0497)	[more]
AT3G23200.1	8.3e-30	47.68	Uncharacterised protein family (UPF0497)	[more]
AT3G53850.1	1.1e-26	43.79	Uncharacterised protein family (UPF0497)	[more]
AT5G02060.1	2.8e-25	43.05	Uncharacterised protein family (UPF0497)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 36..164 e-value: 1.8E-24 score: 86.2
None	No IPR available	PANTHER	PTHR32021:SF16	CASP-LIKE PROTEIN 5A2	coord: 16..179
IPR045009	CASP-like protein 5	PANTHER	PTHR32021	CASP-LIKE PROTEIN 5B3	coord: 16..179

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015841.1	MS015841.1	mRNA