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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GAATATGCATTGTCATGGGATAATCTAATTATAGTCACAAGTTGTTGCTTTCACTATGATCCGGTCAAACTTTTGAAAGCCATTAAAGAAATAAATGACTATGTTTCTTCTTGCAATCCTTTCCAAGCAGATAAAGTAATTCTACAGGTTAGAAGCCAAGAACAAGCTAGGTTTTTATGCATGAATAAG mRNA sequence GAATATGCATTGTCATGGGATAATCTAATTATAGTCACAAGTTGTTGCTTTCACTATGATCCGGTCAAACTTTTGAAAGCCATTAAAGAAATAAATGACTATGTTTCTTCTTGCAATCCTTTCCAAGCAGATAAAGTAATTCTACAGGTTAGAAGCCAAGAACAAGCTAGGTTTTTATGCATGAATAAG Coding sequence (CDS) GAATATGCATTGTCATGGGATAATCTAATTATAGTCACAAGTTGTTGCTTTCACTATGATCCGGTCAAACTTTTGAAAGCCATTAAAGAAATAAATGACTATGTTTCTTCTTGCAATCCTTTCCAAGCAGATAAAGTAATTCTACAGGTTAGAAGCCAAGAACAAGCTAGGTTTTTATGCATGAATAAG Protein sequence EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLCMNK
Homology
BLAST of MS015782 vs. NCBI nr
Match: TYK05762.1 (cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. makuwa]) HSP 1 Score: 53.1 bits (126), Expect = 9.8e-04 Identity = 22/63 (34.92%), Postives = 38/63 (60.32%), Query Frame = 0
Query: 1 EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLC 60
E L W+ ++++T FH D K+++ +K+ D+ S PF ADK ++ + +EQA +C
Sbjct: 42 EIVLDWNKIVVLTRRYFHDDWEKIVEKLKDQLDHPISYKPFHADKALIFFKDKEQANLIC 101
Query: 61 MNK 64
NK
Sbjct: 102 KNK 104
BLAST of MS015782 vs. ExPASy TrEMBL
Match: A0A5D3C3G6 (Cleavage and polyadenylation specificity factor subunit 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold98G002510 PE=4 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.8e-04 Identity = 22/63 (34.92%), Postives = 38/63 (60.32%), Query Frame = 0
Query: 1 EYALSWDNLIIVTSCCFHYDPVKLLKAIKEINDYVSSCNPFQADKVILQVRSQEQARFLC 60
E L W+ ++++T FH D K+++ +K+ D+ S PF ADK ++ + +EQA +C
Sbjct: 42 EIVLDWNKIVVLTRRYFHDDWEKIVEKLKDQLDHPISYKPFHADKALIFFKDKEQANLIC 101
Query: 61 MNK 64
NK
Sbjct: 102 KNK 104
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| TYK05762.1 | 9.8e-04 | 34.92 | cleavage and polyadenylation specificity factor subunit 1 [Cucumis melo var. mak... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3C3G6 | 4.8e-04 | 34.92 | Cleavage and polyadenylation specificity factor subunit 1 OS=Cucumis melo var. m... | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS015782.1 | MS015782.1 | mRNA |
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