MS015708 (gene) Bitter gourd (TR) v1

Overview
NameMS015708
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionchloroplast processing peptidase-like
Locationscaffold983: 450406 .. 452694 (+)
RNA-Seq ExpressionMS015708
SyntenyMS015708
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CTTTTGTTTTTGAGGCCCTTTATATTGTATTCTTCGCTGCGGTGGATGACGTGCCAGAGTTGGGGTTTTCCCAGATGGCCAGGATTTGATGGTTTGTTCAGATTTCTTGTGGTTTTGATCTTATGGTCTATGCTTTTGGAGATTCATTATATTCCATCCTCATCAATGTATCCAACCCTACGTGTCGGAGATCGAATTCTTGTCGAGAAGGTAAATTTCTTATTTCCCCTGGCTTCAAGCTGTGTTTTAGATTTATCGATCAAATCAGGAAGCAGCTTCGGTTTTTTCTATCTTTCTGAGCTGAATTTTGAATTTCAGAGTTCGACTTTGTCTTGGGAGAATTTTTGTGCATGTGAAATGGTCGTAGAGAAGTAGATATGGATTGAGATTTTAGCATGATTATGATGAATCTCAATGAGTTGAAGCTTCAAATTATGCTTCTCTTCTTTTTTATTCGGAGAAAATGGATGGATCATCGATAATATTCTAGGCTAATTCAGTGTCTTGTGGATGATATCTATGAGGTAGTTAGACACGCCCCTCGATCCTGAATTGATCCATGACCATTCTTGGTATCCTTTGATGGATATCCCACATGTAATTCGAGTATGCACTCGATTCTTCTAATAAGCGATAACATATTTTCTTACTAAACCTTGATAATTTTTTGTTACTGACTATTATTATATAAAAGGATTAATAACGGAACAGTTTGTTGAGTTTGCAAAGAGTGCAAACAAAGTCCCACAATGGTTAGGGAAATGGGTGATCCATATATATAAGGGAGGACAATTATCTCCATTGGTCCGAGGCTTTTTGGGTGGAACCAAAAGTAAAACTGTGAGGGCTATGCCCAAAGCGGACAATATCATACCAATGGAGATACTCGAGGTACGAGGGGTACCGTGACTAGGATAATGAAATTTGACCTAGGAATTAAGCTGCAGAGAACATTTTAACCTTTTTAAGCTTTATAAGACATGCAGTGGCCTGCCATTTCTGGAACTCTAAACACTTGTTTTTAATATTTTGCTATAAACTGTTGAAGTCATTTACATCGACTAATGTGAATATTTTCATCTGATTTTTACTAACTAATATTATGTTCTTATGCATTTTCTTCAGGCCTCTTATTACATAAGAAATCCTGCAATTGATGACATTATAACCTTCCGAGACCCGACACAGGTTAGTTGATGAATGACTAATCTGCACGTCTTTTGCTTTAACAGTTTTTTCCTAACAGGATTCTGTTGCAATTATGATGTGCTATAGCAATCTGGACGCCGAGAAGAAAACATTGTTGTAAAGAGAGTTGTTGCAACATCTGGAGACATGGTTGAGGTATGGAAGAGACACTTCTCATCATTATGTCATTGTTAAACAACTAAACTGTTCTATCTCTGGATTATCACTTGATCCCAACTTGGTTCCGGTGCATAACTAGTTTTTCGAATGATAGACCACTTTTCGTGTGCTAAAGTGGTAAGGGATTGGGATGCTCAAATAAGCTATCCAGAGTCCAGAGCTCAAGCCCCTTTAGTAAAAGACTCGATAATTTAGAACTCTTGTTGTCTCTTAAGACTGGCCTTTAGGATTGGTGAAATCTCATGGGGATTTGTTGTGGTGAACCATGAGCTATGAAGCACAGACATAAAATTGTTGAAGTGTCAGTGTCGGACACGCGTCCGACATGTGTCGGACTAGCTTAGTCACGGGCTTCTACAAATGCAATATCATTTTGAGAGAAACTAACCAATTATGTGGTTTTCATCCAACACCTTCCAGGTTTGTGAGGGATGTCTCTATGTCAATGGAATTGCTCAGAAGGAAAACTTCTTAGCGGATCAGCCAACATACACCACAAAATCAACTGTGCGTCGTGTTTCAAACTCTACTCTCTCTTTCATTTCAGTGTATTGACCTGTAATTTTCTATGACGGCTATATGACTTTTAAAGCACATCATTAGAGATTCTAGAATGGAACCAAAATGGCCGAGTTGATTTGATTATGCTCCGTGAACCCATATTCTCAACCAATTATCACCATATTTATGGTATTGATTTTCCTCGTAGCTTACTCATTGGCATTTTGGTCACTGACTAAAATCATAGTTTCCTACAGAATGCAACTTGCAGTTTCAAGTTTGTCCTTAATCTTACTTGTTTCAAACTTGCAGCAAGTGCCAGAAGGCCATGTTTACGTGCTGGGCGACAACCGTAATAACAGCTACGACTCCCATATTTGGTTAGTGTTACTAACTTTATGTTATATTATGTACGTTGTA

mRNA sequence

CTTTTGTTTTTGAGGCCCTTTATATTGTATTCTTCGCTGCGGTGGATGACGTGCCAGAGTTGGGGTTTTCCCAGATGGCCAGGATTTGATGGTTTGTTCAGATTTCTTGTGGTTTTGATCTTATGGTCTATGCTTTTGGAGATTCATTATATTCCATCCTCATCAATGTATCCAACCCTACGTGTCGGAGATCGAATTCTTGTCGAGAAGGCCTCTTATTACATAAGAAATCCTGCAATTGATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGGACGCCGAGAAGAAAACATTGTTGTAAAGAGAGTTGTTGCAACATCTGGAGACATGGTTGAGGTTTGTGAGGGATGTCTCTATGTCAATGGAATTGCTCAGAAGGAAAACTTCTTAGCGGATCAGCCAACATACACCACAAAATCAACTCAAGTGCCAGAAGGCCATGTTTACGTGCTGGGCGACAACCGTAATAACAGCTACGACTCCCATATTTGGTTAGTGTTACTAACTTTATGTTATATTATGTACGTTGTA

Coding sequence (CDS)

CTTTTGTTTTTGAGGCCCTTTATATTGTATTCTTCGCTGCGGTGGATGACGTGCCAGAGTTGGGGTTTTCCCAGATGGCCAGGATTTGATGGTTTGTTCAGATTTCTTGTGGTTTTGATCTTATGGTCTATGCTTTTGGAGATTCATTATATTCCATCCTCATCAATGTATCCAACCCTACGTGTCGGAGATCGAATTCTTGTCGAGAAGGCCTCTTATTACATAAGAAATCCTGCAATTGATGACATTATAACCTTCCGAGACCCGACACAGCAATCTGGACGCCGAGAAGAAAACATTGTTGTAAAGAGAGTTGTTGCAACATCTGGAGACATGGTTGAGGTTTGTGAGGGATGTCTCTATGTCAATGGAATTGCTCAGAAGGAAAACTTCTTAGCGGATCAGCCAACATACACCACAAAATCAACTCAAGTGCCAGAAGGCCATGTTTACGTGCTGGGCGACAACCGTAATAACAGCTACGACTCCCATATTTGGTTAGTGTTACTAACTTTATGTTATATTATGTACGTTGTA

Protein sequence

LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIWLVLLTLCYIMYVV
Homology
[Close]
BLAST of MS015708 vs. NCBI nr
Match: XP_022141359.1 (chloroplast processing peptidase-like isoform X1 [Momordica charantia])

HSP 1 Score: 348.2 bits (892), Expect = 4.2e-92
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 60
           LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL
Sbjct: 3   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 62

Query: 61  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 120
           RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL
Sbjct: 63  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 122

Query: 121 YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW
Sbjct: 123 YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 168

[Close]
BLAST of MS015708 vs. NCBI nr
Match: XP_038885468.1 (chloroplast processing peptidase-like [Benincasa hispida])

HSP 1 Score: 316.6 bits (810), Expect = 1.4e-82
Identity = 149/164 (90.85%), Postives = 157/164 (95.73%), Query Frame = 0 

Query: 3   FLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRV 62
           FLRPF+LYSSLRWM CQSWGFPR PGFDGL RFLVVLILWSMLLEIH IPSSSMYPTLRV
Sbjct: 3   FLRPFLLYSSLRWMNCQSWGFPRLPGFDGLLRFLVVLILWSMLLEIHSIPSSSMYPTLRV 62

Query: 63  GDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYV 122
           GDRILVEKASYYIRNP+IDDIITFRDPTQQSGRREENIVVKRVVA +GD VEVC+GCLYV
Sbjct: 63  GDRILVEKASYYIRNPSIDDIITFRDPTQQSGRREENIVVKRVVAKAGDTVEVCQGCLYV 122

Query: 123 NGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           NGIAQ E+FLA++PTYTTKSTQ+PEGHVYVLGDNRNNSYDSHIW
Sbjct: 123 NGIAQDESFLAERPTYTTKSTQIPEGHVYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. NCBI nr
Match: XP_022991150.1 (chloroplast processing peptidase-like [Cucurbita maxima])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 0 

Query: 3   FLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRV 62
           FLRPF+LYS+LRWMTC SWGFPRWPGFDGL R LVVLILWSM LEIH+IPSSSMYPTLR+
Sbjct: 3   FLRPFMLYSTLRWMTCSSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTLRI 62

Query: 63  GDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYV 122
           GDRILVEK SYYIRNP+IDDIITFRDPTQQSGRREEN+VVKRVVA +GDMVEVCEGCLYV
Sbjct: 63  GDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCLYV 122

Query: 123 NGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           NGIAQ E FLA++PTYTTKSTQVP+GHVYVLGDNRNNSYDSHIW
Sbjct: 123 NGIAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. NCBI nr
Match: XP_022954017.1 (chloroplast processing peptidase-like [Cucurbita moschata] >XP_023542838.1 chloroplast processing peptidase-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 145/164 (88.41%), Postives = 156/164 (95.12%), Query Frame = 0 

Query: 3   FLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRV 62
           FLRPF+LYS+LRWMTC SWGFPRWPGFDGL R LVVLILWSM LEIH+IPSSSMYPTLR+
Sbjct: 3   FLRPFMLYSTLRWMTCLSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTLRI 62

Query: 63  GDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYV 122
           GDRILVEK SYYIRNP+IDDIITFRDPTQQSGRREEN+VVKRVVA +GDMVEVCEGCLYV
Sbjct: 63  GDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCLYV 122

Query: 123 NGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           NG+AQ E FLA++PTYTTKSTQVP+GHVYVLGDNRNNSYDSHIW
Sbjct: 123 NGVAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. NCBI nr
Match: KAG6602120.1 (Chloroplast processing peptidase, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032818.1 Chloroplast processing peptidase [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 312.0 bits (798), Expect = 3.3e-81
Identity = 144/164 (87.80%), Postives = 155/164 (94.51%), Query Frame = 0 

Query: 3   FLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRV 62
           FLRPF+LYS+LRWMTC SWGF RWPGFDGL R LVVLILWSM LEIH+IPSSSMYPTLR+
Sbjct: 3   FLRPFMLYSTLRWMTCLSWGFSRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTLRI 62

Query: 63  GDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYV 122
           GDRILVEK SYYIRNP+IDDIITFRDPTQQSGRREEN+VVKRVVA +GDMVEVCEGCLYV
Sbjct: 63  GDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCLYV 122

Query: 123 NGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           NG+AQ E FLA++PTYTTKSTQVP+GHVYVLGDNRNNSYDSHIW
Sbjct: 123 NGVAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. ExPASy Swiss-Prot
Match: Q8H0W1 (Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 SV=2)

HSP 1 Score: 139.4 bits (350), Expect = 3.9e-32
Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 0 

Query: 23  FPRWPGF---DGLFRFLVVLILWS---MLLEIHYIPSSSMYPTLRVGDRILVEKASYYIR 82
           FP W  F   D    F+ + +  +    + E  YIPS SMYPT  VGDR++ EK SYY R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPAIDDIITFRDP--TQQSGRREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLAD 142
            P  +DI+ F+ P   Q+ G  + ++ +KR+VA  GD+VEV  G L VNG+A+ E F+ +
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 QPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
            P Y     +VPE  V+V+GDNRNNSYDSH+W
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHVW 255

[Close]
BLAST of MS015708 vs. ExPASy Swiss-Prot
Match: O04348 (Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP1 PE=2 SV=2)

HSP 1 Score: 125.9 bits (315), Expect = 4.5e-28
Identity = 61/135 (45.19%), Postives = 88/135 (65.19%), Query Frame = 0 

Query: 37  VVLILWSMLLEIHYIPSSSMYPTLRVGDRILVEKASYYIRNPAIDDIITFRDPT-----Q 96
           V ++  S L E   IPS+SMYPTL  GDR++ EK SY+ R P + DI+ F+ P       
Sbjct: 166 VSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYP 225

Query: 97  QSGRREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLADQPTYTTKSTQVPEGHVY 156
           + G    ++ +KR+VA+ GD VEV +G L+VN I Q+E+F+ +  +Y  +   VP+G+V+
Sbjct: 226 EYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVF 285

Query: 157 VLGDNRNNSYDSHIW 167
           VLGDNRN S+DSH W
Sbjct: 286 VLGDNRNKSFDSHNW 300

[Close]
BLAST of MS015708 vs. ExPASy Swiss-Prot
Match: Q9M9Z2 (Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TPP2 PE=2 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 4.5e-28
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 0 

Query: 37  VVLILWSMLLEIHYIPSSSMYPTLRVGDRILVEKASYYIRNPAIDDIITFRDP--TQQSG 96
           V L+  S L E   IPS+SM PTL VGDR++ EK SY+ R P + DI+ F+ P    + G
Sbjct: 196 VSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHG 255

Query: 97  RREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLG 156
               ++ +KR+VA+ GD VEVC+G L VN   Q E+F+ +   Y  +   VPEG+V+VLG
Sbjct: 256 YSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLG 315

Query: 157 DNRNNSYDSHIW 167
           DNRN S+DSH W
Sbjct: 316 DNRNKSFDSHNW 327

[Close]
BLAST of MS015708 vs. ExPASy Swiss-Prot
Match: P72660 (Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB1 PE=3 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 2.1e-25
Identity = 58/133 (43.61%), Postives = 80/133 (60.15%), Query Frame = 0 

Query: 36  LVVLILWSMLLEIHYIPSSSMYPTLRVGDRILVEKASYYIRNPAIDDIITFRDP--TQQS 95
           ++ L+L   + E  YIPS SM PTL  GDR++VEK SY+   P + DII F  P   Q  
Sbjct: 25  VLALLLRFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQ 84

Query: 96  GRREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLADQPTYTTKSTQVPEGHVYVL 155
           G       +KRV+A  G  VEV  G +Y +G   +E ++ + P Y   + +VP+G V+V+
Sbjct: 85  GYDLGQAFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVM 144

Query: 156 GDNRNNSYDSHIW 167
           GDNRNNS DSH+W
Sbjct: 145 GDNRNNSNDSHVW 157

[Close]
BLAST of MS015708 vs. ExPASy Swiss-Prot
Match: P73157 (Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=lepB2 PE=3 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 3.5e-25
Identity = 53/124 (42.74%), Postives = 75/124 (60.48%), Query Frame = 0 

Query: 43  SMLLEIHYIPSSSMYPTLRVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVV 102
           + + E  YIPSSSM PTL++ DR+++EK SY +R+P   +I+ F        +   +  +
Sbjct: 40  TFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPERGEIVVFNPTDALKAKNFHDAFI 99

Query: 103 KRVVATSGDMVEVCEGCLYVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYD 162
           KR++   GD V V +G +YVNG    EN++A  P Y     +VP+    VLGDNRNNSYD
Sbjct: 100 KRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPAYEYGPVKVPDDQYLVLGDNRNNSYD 159

Query: 163 SHIW 167
           SH W
Sbjct: 160 SHYW 163

[Close]
BLAST of MS015708 vs. ExPASy TrEMBL
Match: A0A6J1CIF2 (chloroplast processing peptidase-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011778 PE=4 SV=1)

HSP 1 Score: 348.2 bits (892), Expect = 2.0e-92
Identity = 166/166 (100.00%), Postives = 166/166 (100.00%), Query Frame = 0 

Query: 1   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 60
           LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL
Sbjct: 3   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 62

Query: 61  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 120
           RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL
Sbjct: 63  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 122

Query: 121 YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW
Sbjct: 123 YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 168

[Close]
BLAST of MS015708 vs. ExPASy TrEMBL
Match: A0A6J1JS29 (chloroplast processing peptidase-like OS=Cucurbita maxima OX=3661 GN=LOC111487833 PE=4 SV=1)

HSP 1 Score: 316.2 bits (809), Expect = 8.6e-83
Identity = 146/164 (89.02%), Postives = 156/164 (95.12%), Query Frame = 0 

Query: 3   FLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRV 62
           FLRPF+LYS+LRWMTC SWGFPRWPGFDGL R LVVLILWSM LEIH+IPSSSMYPTLR+
Sbjct: 3   FLRPFMLYSTLRWMTCSSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTLRI 62

Query: 63  GDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYV 122
           GDRILVEK SYYIRNP+IDDIITFRDPTQQSGRREEN+VVKRVVA +GDMVEVCEGCLYV
Sbjct: 63  GDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCLYV 122

Query: 123 NGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           NGIAQ E FLA++PTYTTKSTQVP+GHVYVLGDNRNNSYDSHIW
Sbjct: 123 NGIAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. ExPASy TrEMBL
Match: A0A6J1GPV1 (chloroplast processing peptidase-like OS=Cucurbita moschata OX=3662 GN=LOC111456402 PE=4 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.9e-82
Identity = 145/164 (88.41%), Postives = 156/164 (95.12%), Query Frame = 0 

Query: 3   FLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRV 62
           FLRPF+LYS+LRWMTC SWGFPRWPGFDGL R LVVLILWSM LEIH+IPSSSMYPTLR+
Sbjct: 3   FLRPFMLYSTLRWMTCLSWGFPRWPGFDGLLRCLVVLILWSMYLEIHFIPSSSMYPTLRI 62

Query: 63  GDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYV 122
           GDRILVEK SYYIRNP+IDDIITFRDPTQQSGRREEN+VVKRVVA +GDMVEVCEGCLYV
Sbjct: 63  GDRILVEKVSYYIRNPSIDDIITFRDPTQQSGRREENLVVKRVVAKAGDMVEVCEGCLYV 122

Query: 123 NGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           NG+AQ E FLA++PTYTTKSTQVP+GHVYVLGDNRNNSYDSHIW
Sbjct: 123 NGVAQDERFLAERPTYTTKSTQVPKGHVYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. ExPASy TrEMBL
Match: A0A1S3CRY6 (chloroplast processing peptidase-like OS=Cucumis melo OX=3656 GN=LOC103504090 PE=4 SV=1)

HSP 1 Score: 295.4 bits (755), Expect = 1.6e-76
Identity = 137/164 (83.54%), Postives = 151/164 (92.07%), Query Frame = 0 

Query: 3   FLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTLRV 62
           FLRPF+ YSSLRWM   SWGFPRWPGFDG  RF+V+LILWSMLLEIH IPSSSMYPTLRV
Sbjct: 3   FLRPFLFYSSLRWMIFHSWGFPRWPGFDGFLRFIVLLILWSMLLEIHSIPSSSMYPTLRV 62

Query: 63  GDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCLYV 122
           GDRILVEKASY+IRNP+I+DIITF+DPTQQSG REENIVVKRVVA +GD VEV +GCLYV
Sbjct: 63  GDRILVEKASYFIRNPSINDIITFQDPTQQSGCREENIVVKRVVAKAGDTVEVFQGCLYV 122

Query: 123 NGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           NGIAQ E+FL ++PTYTTKSTQ+PEGH+YVLGDNRNNSYDSHIW
Sbjct: 123 NGIAQDESFLRERPTYTTKSTQIPEGHIYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. ExPASy TrEMBL
Match: A0A0A0KIU5 (Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G382350 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.6e-75
Identity = 135/166 (81.33%), Postives = 148/166 (89.16%), Query Frame = 0 

Query: 1   LLFLRPFILYSSLRWMTCQSWGFPRWPGFDGLFRFLVVLILWSMLLEIHYIPSSSMYPTL 60
           + FLRPF+ YSSLRWMT  SWGFPRWP FD   RFLV+LILWSMLLEIH IPSSSMYPTL
Sbjct: 1   MTFLRPFLFYSSLRWMTFHSWGFPRWPSFDAFLRFLVLLILWSMLLEIHSIPSSSMYPTL 60

Query: 61  RVGDRILVEKASYYIRNPAIDDIITFRDPTQQSGRREENIVVKRVVATSGDMVEVCEGCL 120
           RVGDRILVE ASY IRNP+I+DIITFRDPTQQS  REENIVVKRVVA +GD VEVC+GCL
Sbjct: 61  RVGDRILVETASYLIRNPSINDIITFRDPTQQSALREENIVVKRVVAKAGDTVEVCQGCL 120

Query: 121 YVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
           YVNG+A+ E+FL ++P YTTKSTQ+PEGHVYVLGDNRNNSYDSHIW
Sbjct: 121 YVNGVAKDESFLLERPMYTTKSTQIPEGHVYVLGDNRNNSYDSHIW 166

[Close]
BLAST of MS015708 vs. TAIR 10
Match: AT3G24590.1 (plastidic type i signal peptidase 1 )

HSP 1 Score: 139.4 bits (350), Expect = 2.8e-33
Identity = 69/152 (45.39%), Postives = 94/152 (61.84%), Query Frame = 0 

Query: 23  FPRWPGF---DGLFRFLVVLILWS---MLLEIHYIPSSSMYPTLRVGDRILVEKASYYIR 82
           FP W  F   D    F+ + +  +    + E  YIPS SMYPT  VGDR++ EK SYY R
Sbjct: 104 FPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPTFDVGDRLVAEKVSYYFR 163

Query: 83  NPAIDDIITFRDP--TQQSGRREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLAD 142
            P  +DI+ F+ P   Q+ G  + ++ +KR+VA  GD+VEV  G L VNG+A+ E F+ +
Sbjct: 164 KPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHNGKLMVNGVARNEKFILE 223

Query: 143 QPTYTTKSTQVPEGHVYVLGDNRNNSYDSHIW 167
            P Y     +VPE  V+V+GDNRNNSYDSH+W
Sbjct: 224 PPGYEMTPIRVPENSVFVMGDNRNNSYDSHVW 255

[Close]
BLAST of MS015708 vs. TAIR 10
Match: AT1G06870.1 (Peptidase S24/S26A/S26B/S26C family protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.2e-29
Identity = 63/132 (47.73%), Postives = 85/132 (64.39%), Query Frame = 0 

Query: 37  VVLILWSMLLEIHYIPSSSMYPTLRVGDRILVEKASYYIRNPAIDDIITFRDP--TQQSG 96
           V L+  S L E   IPS+SM PTL VGDR++ EK SY+ R P + DI+ F+ P    + G
Sbjct: 196 VSLLFRSALAEPKSIPSTSMLPTLDVGDRVIAEKVSYFFRKPEVSDIVIFKAPPILVEHG 255

Query: 97  RREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLADQPTYTTKSTQVPEGHVYVLG 156
               ++ +KR+VA+ GD VEVC+G L VN   Q E+F+ +   Y  +   VPEG+V+VLG
Sbjct: 256 YSCADVFIKRIVASEGDWVEVCDGKLLVNDTVQAEDFVLEPIDYEMEPMFVPEGYVFVLG 315

Query: 157 DNRNNSYDSHIW 167
           DNRN S+DSH W
Sbjct: 316 DNRNKSFDSHNW 327

[Close]
BLAST of MS015708 vs. TAIR 10
Match: AT2G30440.1 (thylakoid processing peptide )

HSP 1 Score: 125.9 bits (315), Expect = 3.2e-29
Identity = 61/135 (45.19%), Postives = 88/135 (65.19%), Query Frame = 0 

Query: 37  VVLILWSMLLEIHYIPSSSMYPTLRVGDRILVEKASYYIRNPAIDDIITFRDPT-----Q 96
           V ++  S L E   IPS+SMYPTL  GDR++ EK SY+ R P + DI+ F+ P       
Sbjct: 166 VSILFRSALAEPKSIPSTSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYP 225

Query: 97  QSGRREENIVVKRVVATSGDMVEVCEGCLYVNGIAQKENFLADQPTYTTKSTQVPEGHVY 156
           + G    ++ +KR+VA+ GD VEV +G L+VN I Q+E+F+ +  +Y  +   VP+G+V+
Sbjct: 226 EYGYSSNDVFIKRIVASEGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVF 285

Query: 157 VLGDNRNNSYDSHIW 167
           VLGDNRN S+DSH W
Sbjct: 286 VLGDNRNKSFDSHNW 300

The following BLAST results are available for this feature:
BLAST of MS015708 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022141359.14.2e-92100.00chloroplast processing peptidase-like isoform X1 [Momordica charantia][more]
XP_038885468.11.4e-8290.85chloroplast processing peptidase-like [Benincasa hispida][more]
XP_022991150.11.8e-8289.02chloroplast processing peptidase-like [Cucurbita maxima][more]
XP_022954017.13.9e-8288.41chloroplast processing peptidase-like [Cucurbita moschata] >XP_023542838.1 chlor... [more]
KAG6602120.13.3e-8187.80Chloroplast processing peptidase, partial [Cucurbita argyrosperma subsp. sororia... [more]
BLAST of MS015708 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q8H0W13.9e-3245.39Chloroplast processing peptidase OS=Arabidopsis thaliana OX=3702 GN=PLSP1 PE=2 S... [more]
O043484.5e-2845.19Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis thaliana OX=370... [more]
Q9M9Z24.5e-2847.73Probable thylakoidal processing peptidase 2, chloroplastic OS=Arabidopsis thalia... [more]
P726602.1e-2543.61Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX... [more]
P731573.5e-2542.74Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX... [more]
BLAST of MS015708 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CIF22.0e-92100.00chloroplast processing peptidase-like isoform X1 OS=Momordica charantia OX=3673 ... [more]
A0A6J1JS298.6e-8389.02chloroplast processing peptidase-like OS=Cucurbita maxima OX=3661 GN=LOC11148783... [more]
A0A6J1GPV11.9e-8288.41chloroplast processing peptidase-like OS=Cucurbita moschata OX=3662 GN=LOC111456... [more]
A0A1S3CRY61.6e-7683.54chloroplast processing peptidase-like OS=Cucumis melo OX=3656 GN=LOC103504090 PE... [more]
A0A0A0KIU58.6e-7581.33Peptidase_S26 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G3823... [more]
BLAST of MS015708 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G24590.12.8e-3345.39plastidic type i signal peptidase 1 [more]
AT1G06870.13.2e-2947.73Peptidase S24/S26A/S26B/S26C family protein [more]
AT2G30440.13.2e-2945.19thylakoid processing peptide [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000223Peptidase S26A, signal peptidase IPRINTSPR00727LEADERPTASEcoord: 44..60
score: 44.12
coord: 145..164
score: 57.5
coord: 101..113
score: 45.97
IPR000223Peptidase S26A, signal peptidase ITIGRFAMTIGR02227TIGR02227coord: 34..165
e-value: 2.6E-33
score: 113.1
IPR000223Peptidase S26A, signal peptidase IPANTHERPTHR43390SIGNAL PEPTIDASE Icoord: 5..169
IPR019533Peptidase S26PFAMPF10502Peptidase_S26coord: 35..166
e-value: 4.3E-33
score: 114.6
IPR019533Peptidase S26CDDcd06530S26_SPase_Icoord: 47..166
e-value: 4.1004E-20
score: 78.0111
NoneNo IPR availableGENE3D2.10.109.10Umud Fragment, subunit Acoord: 53..174
e-value: 5.6E-29
score: 102.6
NoneNo IPR availablePANTHERPTHR43390:SF10CHLOROPLAST PROCESSING PEPTIDASE-LIKEcoord: 5..169
IPR019758Peptidase S26A, signal peptidase I, conserved sitePROSITEPS00761SPASE_I_3coord: 150..163
IPR019756Peptidase S26A, signal peptidase I, serine active sitePROSITEPS00501SPASE_I_1coord: 53..60
IPR036286LexA/Signal peptidase-like superfamilySUPERFAMILY51306LexA/Signal peptidasecoord: 44..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS015708.1MS015708.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
biological_process GO:0006465 signal peptide processing
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0016020 membrane
molecular_function GO:0004252 serine-type endopeptidase activity
molecular_function GO:0008236 serine-type peptidase activity