MS015668 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGGGAACTGTGGGACCTCTTCTGTGCATAGGCGATTTTCTGTGCGATGTTGGAGAAGAAGATGGCGGAGAAGGAAAAGGATCTCATGAAACCCCCAAATCAGTAGCATCATCATCTTCATCCTTTGCTTCTGTATCCTGTTTTCCAGACGTATCTGAATCCCCCGATCTCGCCAAACTCTTTCAGGTCTTCCTCTCCCTCTCTCTTCATTACTCGATTCTTCTTCAATTACCGCTTCCGAATGTTGGTTGTTTTTGTTCTTTGGCTAATCGATGCTAGGATCACGCGGATTTTCGTATTGCGACTGTGATTTTTAAGGGCTTGAACTATTTTGTTATGAGCTTTATGTTTGTTTCCCGTTCCAAATATCATAGCGACGAGAATCTAACACTGTCCGCCTTCTTCTACTTCAGGAAAATTATGACCAATTGAACAGAGCATTCGATGATAAGGATCACTCCTGGACAGCCTTGACTTTGAAGGTAGGGTGTTTGTTGTGCTAAACATTGATTTTTTTTTTTTTGGTCCTTCCCCTTCATATTATTTATTATTGCATGATACAATGATAAGAAGTAATCTCTGGACATTTTGGGGTTGAAACTTTGCCTGTTTACAAGTTACAACAACCCATATCTTTTGATTTTGAAAGACTGTTTGATGTTTGAGCAAAGGTATTGACAATTGTATTTCCTTATGGCTGTATTTTGGGGCATTTTCAGATGTGCAGTGCTCTTGAAACTGCTAGTAAGTTGGTTGAATCAACCAACTCAAATTCGAGGTTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGATTGTGGAGAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAGACCAGATATAGCTCTCAGGACTCCATGTCTTCTCAGAATCAAGGT ATGAGGGGAACTGTGGGACCTCTTCTGTGCATAGGCGATTTTCTGTGCGATGTTGGAGAAGAAGATGGCGGAGAAGGAAAAGGATCTCATGAAACCCCCAAATCAGTAGCATCATCATCTTCATCCTTTGCTTCTGTATCCTGTTTTCCAGACGTATCTGAATCCCCCGATCTCGCCAAACTCTTTCAGGAAAATTATGACCAATTGAACAGAGCATTCGATGATAAGGATCACTCCTGGACAGCCTTGACTTTGAAGATGTGCAGTGCTCTTGAAACTGCTAGTAAGTTGGTTGAATCAACCAACTCAAATTCGAGGTTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGATTGTGGAGAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAGACCAGATATAGCTCTCAGGACTCCATGTCTTCTCAGAATCAAGGT ATGAGGGGAACTGTGGGACCTCTTCTGTGCATAGGCGATTTTCTGTGCGATGTTGGAGAAGAAGATGGCGGAGAAGGAAAAGGATCTCATGAAACCCCCAAATCAGTAGCATCATCATCTTCATCCTTTGCTTCTGTATCCTGTTTTCCAGACGTATCTGAATCCCCCGATCTCGCCAAACTCTTTCAGGAAAATTATGACCAATTGAACAGAGCATTCGATGATAAGGATCACTCCTGGACAGCCTTGACTTTGAAGATGTGCAGTGCTCTTGAAACTGCTAGTAAGTTGGTTGAATCAACCAACTCAAATTCGAGGTTTTTGTTGGAGAAGATTGTGGAGCTTGAACAGATTGTGGAGAAGGGAGATTCTACAAGAGAGGCAGCCATGGCCATCCAGACCAGATATAGCTCTCAGGACTCCATGTCTTCTCAGAATCAAGGT MRGTVGPLLCIGDFLCDVGEEDGGEGKGSHETPKSVASSSSSFASVSCFPDVSESPDLAKLFQENYDQLNRAFDDKDHSWTALTLKMCSALETASKLVESTNSNSRFLLEKIVELEQIVEKGDSTREAAMAIQTRYSSQDSMSSQNQG Homology
BLAST of MS015668 vs. NCBI nr
Match: XP_022141406.1 (uncharacterized protein LOC111011816 [Momordica charantia]) HSP 1 Score: 283.9 bits (725), Expect = 8.1e-73 Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of MS015668 vs. NCBI nr
Match: XP_022989818.1 (uncharacterized protein LOC111486891 [Cucurbita maxima]) HSP 1 Score: 237.3 bits (604), Expect = 8.6e-59 Identity = 126/151 (83.44%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of MS015668 vs. NCBI nr
Match: KAG6602083.1 (DIS3-like exonuclease 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58 Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of MS015668 vs. NCBI nr
Match: KAG7032788.1 (hypothetical protein SDJN02_06838 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58 Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of MS015668 vs. NCBI nr
Match: XP_022964546.1 (uncharacterized protein LOC111464539 [Cucurbita moschata]) HSP 1 Score: 236.1 bits (601), Expect = 1.9e-58 Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of MS015668 vs. ExPASy TrEMBL
Match: A0A6J1CJ28 (uncharacterized protein LOC111011816 OS=Momordica charantia OX=3673 GN=LOC111011816 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 3.9e-73 Identity = 147/148 (99.32%), Postives = 147/148 (99.32%), Query Frame = 0
BLAST of MS015668 vs. ExPASy TrEMBL
Match: A0A6J1JRF3 (uncharacterized protein LOC111486891 OS=Cucurbita maxima OX=3661 GN=LOC111486891 PE=4 SV=1) HSP 1 Score: 237.3 bits (604), Expect = 4.2e-59 Identity = 126/151 (83.44%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of MS015668 vs. ExPASy TrEMBL
Match: A0A6J1HJ70 (uncharacterized protein LOC111464539 OS=Cucurbita moschata OX=3662 GN=LOC111464539 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 9.3e-59 Identity = 125/151 (82.78%), Postives = 137/151 (90.73%), Query Frame = 0
BLAST of MS015668 vs. ExPASy TrEMBL
Match: A0A5D3BZV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1415G00780 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.5e-52 Identity = 115/152 (75.66%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of MS015668 vs. ExPASy TrEMBL
Match: A0A1S3BE50 (uncharacterized protein LOC103488633 isoform X4 OS=Cucumis melo OX=3656 GN=LOC103488633 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 6.5e-52 Identity = 115/152 (75.66%), Postives = 130/152 (85.53%), Query Frame = 0
BLAST of MS015668 vs. TAIR 10
Match: AT4G08240.2 (unknown protein; Has 33 Blast hits to 33 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 9.3e-27 Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 0
BLAST of MS015668 vs. TAIR 10
Match: AT4G08240.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 117.5 bits (293), Expect = 9.3e-27 Identity = 66/132 (50.00%), Postives = 89/132 (67.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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