![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS015641 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CAACGATCCAATTATTTTATTGTTATTGAACCAGGTGGTGCTATATTCACTTGGGGTTGGGGAGGTTCTCACGGAACTTTCTCTGTGGATGGTCATTCGTCTGGGGGTCAGCTGGTACGTTGCTTCTCTTGCTTTTCTATTCTTCTTACTGCTGGATTTGTTAAAAATCGGTCGACATTTGAATGTGATTACTTGAAATCTAGAGTCTTTTTTTTTTTTTAAACCTGCATTTGCATTATGATTTCTTAGAAAATAAGTTCTCATTTGAAGCGATCTGATTACATATGAAAATTCTAAAGACAGGCACAAGAGCACTGGCATTGCTGCATCTCTGCACTGAACATATTTATACGTTATATGGTTAAACAACTACTTCTCTAGTTATTTAGTTCTACTGGATAGAATTCTTTTCTTAAGGCTTACTGTTTAACTGCTGGACTTCTAATAGTTTAGGCCCCATTTGATAACCATTTTGCTTTTAGTTTTCTGTTTTTGAAAAAAATTATGCTTGTTTTCACCCTTCTTAAAACTACATAGAAAAAAATAAGTTTTTTTGAAAAAATATTTGTTTTTTAGTTTTAAAAATTTGTCTTAGATTTTGCCAACAATTTTAGAAAATAGATGCAAGACAAATAAATAGGTGAAAATAATGTTTTACATGTTTAATTTTCAAAAACAGAAAACCAAAATCTAAATAGTTATGAATTTTCAACTGGGCTCTTGTATCTTGAGCTAATGTTTCCTGTTTTAGATCACTCCTACGTAAGGCCCATTTGGTTGCTATTTCAGTATTTTGTATCCAAAATTTCAATTGATAAAGGATGAATTTGTTACTACTACTGTTTTAAACTTCATTGTCTACTTTTTTTTAAAAAAGTTAGAGCAATTTTCAAAAGCATGGTTTTTGGTGTCTCAAATATGATTGAGATGCCAAAGGGTTTCGTTTCGAAAAGTCTGAGAATAAAACATAGAGATTATCAGTAAACGATCTCATTTTTTAAGAACAAAATTATTATAAAGTGAGGTCTAAAGTTGTTAGTCATACCCCATATTTCGAACTCAGCGGTTTCCATAAATTCCTACAACAGTTCGTCTTGGGCTAGATTTACAACTGTCCTCAAACAGCTTGTGTAGCCATAAGGGTTCTGTTTGAATTGCAGGGACACGGCAGTGATGTTGACTATGTGAAACCTATGATGGTCGACATTGGGGAGAATGTGAAGTCAGTACAAGTCTCCTGTGGGTTCAACCACACCGGTGCCATACTCGAGTACAAG CAACGATCCAATTATTTTATTGTTATTGAACCAGGTGGTGCTATATTCACTTGGGGTTGGGGAGGTTCTCACGGAACTTTCTCTGTGGATGGTCATTCGTCTGGGGGTCAGCTGGGACACGGCAGTGATGTTGACTATGTGAAACCTATGATGGTCGACATTGGGGAGAATGTGAAGTCAGTACAAGTCTCCTGTGGGTTCAACCACACCGGTGCCATACTCGAGTACAAG CAACGATCCAATTATTTTATTGTTATTGAACCAGGTGGTGCTATATTCACTTGGGGTTGGGGAGGTTCTCACGGAACTTTCTCTGTGGATGGTCATTCGTCTGGGGGTCAGCTGGGACACGGCAGTGATGTTGACTATGTGAAACCTATGATGGTCGACATTGGGGAGAATGTGAAGTCAGTACAAGTCTCCTGTGGGTTCAACCACACCGGTGCCATACTCGAGTACAAG QRSNYFIVIEPGGAIFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYVKPMMVDIGENVKSVQVSCGFNHTGAILEYK Homology
BLAST of MS015641 vs. NCBI nr
Match: XP_022154913.1 (ultraviolet-B receptor UVR8 isoform X2 [Momordica charantia]) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of MS015641 vs. NCBI nr
Match: XP_022154912.1 (ultraviolet-B receptor UVR8 isoform X1 [Momordica charantia]) HSP 1 Score: 142.9 bits (359), Expect = 1.2e-30 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of MS015641 vs. NCBI nr
Match: XP_038883567.1 (ultraviolet-B receptor UVR8 isoform X1 [Benincasa hispida]) HSP 1 Score: 138.3 bits (347), Expect = 2.8e-29 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of MS015641 vs. NCBI nr
Match: XP_038883571.1 (ultraviolet-B receptor UVR8 isoform X5 [Benincasa hispida]) HSP 1 Score: 138.3 bits (347), Expect = 2.8e-29 Identity = 62/66 (93.94%), Postives = 65/66 (98.48%), Query Frame = 0
BLAST of MS015641 vs. NCBI nr
Match: XP_022966331.1 (ultraviolet-B receptor UVR8 isoform X1 [Cucurbita maxima]) HSP 1 Score: 136.3 bits (342), Expect = 1.1e-28 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
BLAST of MS015641 vs. ExPASy Swiss-Prot
Match: Q9FN03 (Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana OX=3702 GN=UVR8 PE=1 SV=1) HSP 1 Score: 44.3 bits (103), Expect = 7.3e-04 Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0
BLAST of MS015641 vs. ExPASy TrEMBL
Match: A0A6J1DLK8 (ultraviolet-B receptor UVR8 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022061 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.6e-31 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of MS015641 vs. ExPASy TrEMBL
Match: A0A6J1DMZ3 (ultraviolet-B receptor UVR8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022061 PE=4 SV=1) HSP 1 Score: 142.9 bits (359), Expect = 5.6e-31 Identity = 66/66 (100.00%), Postives = 66/66 (100.00%), Query Frame = 0
BLAST of MS015641 vs. ExPASy TrEMBL
Match: A0A6J1HRS2 (PH, RCC1 and FYVE domains-containing protein 1 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.2e-29 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
BLAST of MS015641 vs. ExPASy TrEMBL
Match: A0A6J1HMP4 (ultraviolet-B receptor UVR8 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.2e-29 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
BLAST of MS015641 vs. ExPASy TrEMBL
Match: A0A6J1HP08 (ultraviolet-B receptor UVR8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111466019 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.2e-29 Identity = 61/65 (93.85%), Postives = 64/65 (98.46%), Query Frame = 0
BLAST of MS015641 vs. TAIR 10
Match: AT5G08710.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 118.6 bits (296), Expect = 2.2e-27 Identity = 49/62 (79.03%), Postives = 58/62 (93.55%), Query Frame = 0
BLAST of MS015641 vs. TAIR 10
Match: AT5G63860.1 (Regulator of chromosome condensation (RCC1) family protein ) HSP 1 Score: 44.3 bits (103), Expect = 5.2e-05 Identity = 22/63 (34.92%), Postives = 34/63 (53.97%), Query Frame = 0
BLAST of MS015641 vs. TAIR 10
Match: AT1G65920.1 (Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain ) HSP 1 Score: 41.2 bits (95), Expect = 4.4e-04 Identity = 26/68 (38.24%), Postives = 34/68 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
|