MS015393 (gene) Bitter gourd (TR) v1

Overview
NameMS015393
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionProtein of unknown function (DUF 3339)
Locationscaffold586: 4573 .. 10920 (-)
RNA-Seq ExpressionMS015393
SyntenyMS015393
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGATTGGGGCCCAGTTGTGGTGGCTGTGGTTCTCTTCATTCTGCTCTCCCCAGGGCTTCTGTTTCAGGTCCATGGCAGCGACAAATTCCTGGAGTTCGGAAGCTTCGAGACCAGCGCCACCTCCATTTTCTTCCATTCCATCATCTTCTTCGCCCTATTCTGCATCTTCAACCTCGTCCTTCACATTCATATCAATATATAATCGCAATCGCCAATCGCAATCGGACTCTGTTTTTTCGAATTTCTAGGTATCCTCTGCTTCTGTTTCTTTAATTTCGATTCTGTCTTAATGAAATTCTGCTTGTTTTTTCCTGTAATTGATCTTCGTTGTTTCGATATCCGTTTTCGTTTCCGCGGCGGCGGTAACGACGGAGAAAAAACGTCCCTCCGCCTCCGCCGCCGACCGATATCGGTGTTTGTTTAAATGGAAATTCATATTACTCTGGTTTATGTTATCAATCTGTTTACTCAAATGTATTCATTTTAGTTTCTAATATTTTTCATCTTTTTTTATTTTTTACTTTTCATTTTTGTTTAAAATTTTTATTTTATGTTAATGTAACAGCTCGGTTGCCAAGTGTCTTTTTGTATTATTGTTTCTTGTTTCTCGTGCATTTGAAACTATTTATGAAAGTTGTCAAAATTGTATAGAAATTTTAAAAACGTAAGTTTTTTTGTTTTTCTTGTTCTTATTTTCAATTTGTTCGAACTTAACGTTACCGAATTAGTCCCTGCAAATCTGACTCTCACCTATATTTTAACTATGGTATTCAATATCCGTCCACATATTCATCAATATATCCATGTATCCATAGGTTCGACATCAATATGCGGGGTAAATTATAATATTACCAAAAAAAATTGACAAAATAGGAAAAATATCAACAAAATTTCATTAATATATATATATATATATATAATATTAATGTTAATCATTTTTAACTTGTTTAGAAATTGTGAAACGGTATTCGTTAATTTAAATATTTTTCTAGTTTTTTATTTTTATAACTTTTCCATAAACCTTCATCGAGATCGACATTTTATCTACATTTTCGTCAATATTTTCATGAAATTGAGTACTCGACATTTCCATCGACATCACATTAGAAACTTATTTTAACTTTAAAAACTCAATAAATCAAATTTAAAACCTGAGGTACTCTACCTTATCTTATTTTTCCAAAAATACATAAATTAAAGTTCCATTTTGTACATGAGAATGATCTAACAATATTTATATTTATATGTTTATAACAAATTGGGGAGTGAAGCAAAAAAACTTGTTTGGATTATTTCCAAAAGTTATATACGATTTTGATAATAACGTTTCTAAAAAATAGAAACACGAAACATAATTAATTTCAAAATGCTTAGGTTTCCTAATAAAATTTGGAAACAAGAAACACGAAATGGGAACCTTATCGAACGGGCCCTGAACTGAAGTACTGAGGAACATTAATAAATTGCCTTATCCAATGTATAATACTCAATTGAATTTTCTTTTTCATATTATTTGTTTCATAATATTAACTTTTCCTCCATTTACTCTCTTTAACTACAATTTTTCTACTATTTGGATTTTTTTCTCTAACTCGCCTCTTTCCATTATTCAACTTCAATATTCTAATACTTCTCTCATAGATGTTTGACAACTCATTATTATCTTAAAACATATCTGTTTTTGCATTTTTTTCTCTCTTAATTGTCAAACATCTCATGTTACATAGACAAACATTTTTCATTTTCAATTTTAGCCAGATGAAAGAAGTTACATAAGTCGAGTTATTCATTTATTATTTTAAGTAGGTCAACTTATTTATTATAAGTATTGCATGTGGGTGGATTTTCCCATTATTTGATGGGTACATCTATCCATATTTTAAAGTCTCACTCAACTTCCATTAACAAGTATGCTTAAAAAAATAAAACGTTCATACTAGTAAAAACTAATCATTTCCATACTTATTTTAAAACGTTCATACTAGTATAATTGATTTTTCAAAATCACCCTCCAAATGATGACTTAAAAATAAATTTAAAGTAATTTTAAATTTTACTGAAATCAATTGGAAGTGATTTGATGATTATGATCATGTCAAAATGACTCCCAAACACACTCTTAACAAAACAAATGAATCAATAGGTAAAGGTAAAGTTGAAAGTTTTTTAAAACAATAATAATGAAATTAAAAAATGATAGGAATATTAGGTACCAATATTTTTATATTTAATCAAGTATAATTTAAAACAAATTATTAAATCTAAAAGTTATCATTTTGGTTATTTTTTACTATTAATTTTAATGTAACTAGTATTAGTTGCTTAATAATATAAGATAAGAATAACATAGCATCACGTGTGTTAATTTGTGTAATATATATAAATGATGGAATGCAATTTGTCATTATACATTTTTATAAATAGATTAAAGTTTAATGATCAAGTGGGTTTTCAATTCAATTCAACCCCAGATAACTTTAATAAATCTCAAGTCTTACCAAATACAGTGACAGGCCAACTAATGTATCAGACTTTCAATTAATGACTTTCTTTTTTCTGAATTAATTTTTAGGTTTATGTTTTGACATCTAGTATGAAATAAATATGTATTTTTAAATTAACAATTTTTTTTAAATTACACATTCAAATCAAATTCAAACTCAAATGCAATATAAAAATACAATTAAAAAAGCCCAAACTTATGCCATGTTTGAAAAGAAAAAATTAAAAATGGTACAAAAAATAGTATAAACTAGAATATGTATTATATATATAGCATTATGTTTAAAAATTTACAAAATTACATTCCGAATTAAATTGAAGTAAATTAAAGTCCACAAATCTAGCTAATTGGTGAGTTCAAATCTCCACCACAACATATTGTATTAAAAAAAATCCACAAATTTGTGACCTTTTTAAATAAAAGAAACAAAAAAGTAATTATATTTTTATAAATACATATTTGTTATCTACCCTTTCGTGTAATTTCCTATAATTTATATGCTATGAAGGAACATTTTTCAAAGACAAAAGAAATTATTCTCATCTTATCTTTTTAGTATAACAAGTGGAGGTAGAATATTCAAATTCGTGGGTTTTTAGGGTGCTAAATATTACTAGGCTAATTAAGCTAAGGTTGGCTCAGCCATTTGGTTTTTGTACTTGAATAAAAAAAAAAATCTATTTTTTTAACTATTTTCTTTAAAGAAAATTTATAAATTTGGTCTCTACAATTATTCCTACGTCTATTTTGCCCTAATCTCTTAAAATAGTTCATTAATTCATTAAGTCAATACATTTTCAATTTTGTATCCTAGGTTTACTCAACACCTTTGTTTTAGCGCTTACGTGACATGATGATCGTATTAATCCAGATCATGTGGGCAAATTCAAACATTTAGTCTTAGTCTTTAGATACAAAATAAGTATGTTGGCCTTATTACCATTTTTTTAAAAATATAATACTAAATAAATATAACCTTAAAAATTTAAGAACAAATTAGATCAACATTCATAGACTAAATTTATAATTTAATCTTTAACTTTTTTAATAAATTATTTACCAAAAATCTAATAAAAAAATTAAGCACATATTTATTCATGTCTACATTGACAAATATTTGAAGCTATGTAATAGATTAGGCATTATTAGTTTTTCAAATATATGGACTGTTAAATTGGTGATGAAAAATCAATAGTAAATATTAAAGTGGTTTTTATGCAAAATTTTGAACACGAAGTAAAACCTTTTAAAGTTGAGAGAATTGAAAATAAGAATAAAAAAGCTTAGAGCTCGTTGGTAATTAATTTCTCATTTTTTCCTCATTTTCAATTTTTTAGAAATTACATAGTCGTTTCATAACTATTTTTTTTTTCTCATTTCTCACGTTTCCAAAATTTTGTATAATATGTTTAGAAATAACAAAATCAAGTTGCTCGTTTTTTACCTTTTACTTTCCTGTTTTTATTCAAAACATTAATAAAAGAATTATTTTATCATTATTGTATAAAATGCAGGCTTTTTTTTCATTTTCTAAAAAATATTTAACAATTAACCATACAAATTTGATTAGTATAACCCAATTTGTGTGATTACATTATTTATGAACGGTTTGATCACATAAAGTTTTTAACCTGAAAAGCTAAATTCCATGCATCGTTTGTAAGTTGCATTCTTTTTTCTTTTTGAAAATTGCATGTGTATTATCTTGACTTAGTTGTTGCATGCTTTGTAATATAATTTAAATATAAGGTTTAAATTTCCCTTTCATTCCTAACTATTTATCTTCATTCCACCGTTTAACTTTTAATTTTCGAAATGTCTATTTTAAAAATGAACCTTAAATTTTTTAATACATACTCATCTTTGACCAATTTATGTAGCTCTAACCATATTAACAAGCTGTTAATATATACTTGAAACTAAATTGTCAATTTGTTAAAAGTAAAGTAATAGCTCCAAGGAGAAGATATTAAGGATAGTTAATGCTTATGTGTCGTGATCCCAGGAGAGAATGTTGTATACGTACACCTTACTTGGCAACGAGTCATTGCTTGGTGGAAGTTGCGTCCTATGTAGCTTGAACCTTATTCCTTGAGATCCCAAACTATCCAAACTATCCCTTGGAAATTCTTGTCTTCAAATTATTTTAAAACGTCAAAAAACACATACATTATTTGGACATGATTGTTGCCTTGGTTGAAAATAAATTTAAGGAAATAATAATTTCTTCAATAATTAACACGGATAATTAATGTAAGAAACGGAAATTATGGGTTGTGGCATGTCTATAAACGTTATCCATAGAGAAGACATGCTCCTACCACTCAACTCCAAAAAATATAACAATAATACTTCCAGAGATCTTGTGTTCAACTAAATTTTCTTACCAATCTGGTTCTTCGAAATAAAATTCTGAAGAAGAAAGAAAACCACACTAGAACTCTTTTGATTTAATTTAAAAAATATATATATATTTGTGAGAAAATTTTGAGAAAGATCGTGAAAGCACTCCCTCTTATTAAGGAAATTACTTCCTCTTAGGAATAGTGAACTACCAAGTTAAAAGAATAAAATAAAGTTAATAAAAATATGAAATAAAATAAAATCTTTAAAATATCCAACATCCCAAACCCTATGAACCCTACTCGAACTTCTTCAGCTTACCAATTTCATGCTAACAACTAATAGTTTAGCACTCTCGAATAAAGGTTTGGATTAGGGTACGGAAATAAATTAAGATTTTCCGTTTGTAGATGCTAGATTTATATATAATATTTTGAATTATTATTAGATAATATTATTTGAATTAGTATATAGTTTAAATTATATTATTTGAATTAGATTTTCTATTTTATGTATTCTCTATTTTCTTTTTCTTCCACTAAAATTAAGAGAAGAAATCATCCTTCCTCATTTCATACGAAAGTACAGAGATCATTTATTTGTCGGATAAAATCAATTCAACTGCTTTTTCTTTCTCTATATCCTTAGTCCAATAGAGCTTCTTTCACCAGACAAGAAAGAAAAAAAATTGAAATATATCATTCTAGTTTTTATAGAAAAATTACAAGAAGATAAAAGAAGAACGAACCAAGTGAAAGAAGTAGAGACTACGTCGGAGAAGAAGCATATGAACCAGGTAAACACCGAAACCCGTCGATCCGACTCGGGTCGACCGTGGTTGGCGCCAACCAGGTCTGGGTGCCGAGGTGTCGTCGGCCCATGGTCGAGAACCCTCCTTTAGTTCTCCTTGACTTTTGTGCAGCCCGATCCAAACCTGCCCTATCTCAACCCTCGATCCGACATTAGGCTCACGACGAAACACATGGATCTAAGAGTTCAGATTTCCGGAGTAATTCGACTTAGAAGTCTTGTCGATCACTTTTATTCTAGAACATTTGTACGAATTTAACGGAATTCTAGGTGGCGAAATTTCAATGTTGATGGCTTAGTTTAATTAACGAAAATTACTAAGAGAGAAAGAGGAAAAAAAACAAAAACAAAAACAAAAAAAGGTAAAGTGAAATTGTTTAAAAAAAAATGGTGAGTTTTTTAGATGAGCCCAAGTATAAAAGGCGGTGAGAGGGAGGCGCGAGTGGTGAGTGAGGAACCAAAAACCAGAGAAAAAAAAAAACGATGGCGGATTGGGGCCCAGTTTTTGTGGCTGTGGTTCTCTTTCTTCTTCTATCTCCCGGCCTTCTCTTCCAGGTCCCCGGCCACCATCAATTCGTCGAGTTCGGCAACTTCCATACCAGCGGTGCCTCCATTTTCATCCATTCTCTCATCTTCTTCGCCCTCCTCTGCCTCTTCACCTTCGTCGTTCAGCTTCACATCTACATC

mRNA sequence

ATGGCGGATTGGGGCCCAGTTGTGGTGGCTGTGGTTCTCTTCATTCTGCTCTCCCCAGGGCTTCTGTTTCAGGTCCATGGCAGCGACAAATTCCTGGAGTTCGGAAGCTTCGAGACCAGCGCCACCTCCATTTTCTTCCATTCCATCATCTTCTTCGCCCTATTCTGCATCTTCAACCTCAGAAAAAAAAAAACGATGGCGGATTGGGGCCCAGTTTTTGTGGCTGTGGTTCTCTTTCTTCTTCTATCTCCCGGCCTTCTCTTCCAGGTCCCCGGCCACCATCAATTCGTCGAGTTCGGCAACTTCCATACCAGCGGTGCCTCCATTTTCATCCATTCTCTCATCTTCTTCGCCCTCCTCTGCCTCTTCACCTTCGTCGTTCAGCTTCACATCTACATC

Coding sequence (CDS)

ATGGCGGATTGGGGCCCAGTTGTGGTGGCTGTGGTTCTCTTCATTCTGCTCTCCCCAGGGCTTCTGTTTCAGGTCCATGGCAGCGACAAATTCCTGGAGTTCGGAAGCTTCGAGACCAGCGCCACCTCCATTTTCTTCCATTCCATCATCTTCTTCGCCCTATTCTGCATCTTCAACCTCAGAAAAAAAAAAACGATGGCGGATTGGGGCCCAGTTTTTGTGGCTGTGGTTCTCTTTCTTCTTCTATCTCCCGGCCTTCTCTTCCAGGTCCCCGGCCACCATCAATTCGTCGAGTTCGGCAACTTCCATACCAGCGGTGCCTCCATTTTCATCCATTCTCTCATCTTCTTCGCCCTCCTCTGCCTCTTCACCTTCGTCGTTCAGCTTCACATCTACATC

Protein sequence

MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNLRKKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI
Homology
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BLAST of MS015393 vs. NCBI nr
Match: KAA3459460.1 (transmembrane protein [Gossypium australe])

HSP 1 Score: 162.5 bits (410), Expect = 2.4e-36
Identity = 81/153 (52.94%), Postives = 105/153 (68.63%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M DWGPV V VVLF+LLSPGLLFQ+ G  +F+EF +F+TS  SI  HS+++FAL CIF L
Sbjct: 1   MTDWGPVFVGVVLFVLLSPGLLFQIPGKSRFVEFSNFQTSGPSILVHSVLYFALICIFLL 60

Query: 61  --------------------RKKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFG 120
                                K + M+DWGPVFVAVVLF+LL+PGLL QVPG  + +EFG
Sbjct: 61  AIKLEIIPPSGQHRRVLFPREKDEKMSDWGPVFVAVVLFILLTPGLLIQVPGKSRAIEFG 120

Query: 121 NFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI 134
           NF TSG SI +HS+I+FAL+C+    + +H+Y+
Sbjct: 121 NFQTSGVSILVHSIIYFALICILLLAIGIHMYV 153

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BLAST of MS015393 vs. NCBI nr
Match: XP_021644306.1 (uncharacterized protein LOC110638161 [Hevea brasiliensis])

HSP 1 Score: 161.8 bits (408), Expect = 4.1e-36
Identity = 82/142 (57.75%), Postives = 105/142 (73.94%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M+DWGPV VAVVLF+LL+PGLLFQV G  + +EFG+F+TS  SI  HS+++FAL C+F L
Sbjct: 1   MSDWGPVFVAVVLFVLLTPGLLFQVPGRHRCVEFGNFQTSGASIMIHSLLYFALVCVFFL 60

Query: 61  RKK----------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIF 120
             K          + MADWGPV +AVVLF+LLSPGLLFQ+PG  + VEFGN  TSG SI 
Sbjct: 61  AVKVHLYLVCESNQKMADWGPVVIAVVLFVLLSPGLLFQLPGKGRIVEFGNMQTSGISIL 120

Query: 121 IHSLIFFALLCLFTFVVQLHIY 133
           +H++IFFAL+ +F   + +HIY
Sbjct: 121 VHTIIFFALITIFLIAIGVHIY 142

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BLAST of MS015393 vs. NCBI nr
Match: XP_015893840.1 (uncharacterized protein LOC107427943 [Ziziphus jujuba])

HSP 1 Score: 159.5 bits (402), Expect = 2.1e-35
Identity = 79/140 (56.43%), Postives = 101/140 (72.14%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M+DWGPV VAVVLFILL+PGLL Q+ G  +F+EFG+F+TS  SI  HS+++FAL CIF L
Sbjct: 1   MSDWGPVFVAVVLFILLTPGLLIQIPGKSRFVEFGNFQTSGVSILVHSVLYFALICIFLL 60

Query: 61  R--------KKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIH 120
                        MADW PV + VVLF+LL PGLLFQ PGHH+ +EFG+  T+G +I +H
Sbjct: 61  AIGVHIFSGFSSAMADWAPVVIGVVLFVLLQPGLLFQFPGHHKQLEFGSMKTNGKAIAVH 120

Query: 121 SLIFFALLCLFTFVVQLHIY 133
           +LIFFAL C+F   + +HIY
Sbjct: 121 TLIFFALYCIFILALHVHIY 140

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BLAST of MS015393 vs. NCBI nr
Match: XP_039156196.1 (uncharacterized protein LOC104417744 [Eucalyptus grandis])

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-35
Identity = 81/147 (55.10%), Postives = 105/147 (71.43%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M+DWGPV VAVVLF+LL+PGLLFQ+ G  +F+EFG+F+TS  SI  HS+++F L C+F L
Sbjct: 1   MSDWGPVFVAVVLFVLLTPGLLFQLPGRHQFVEFGNFQTSGASIMVHSLLYFCLVCVFVL 60

Query: 61  RKK---------------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTS 120
             K               + MADWGPV +AVVLF+LLSPGLLFQ+PG  + VEFGN  T+
Sbjct: 61  ALKVHVYHRDACARRERPREMADWGPVVIAVVLFILLSPGLLFQLPGKMKAVEFGNMQTT 120

Query: 121 GASIFIHSLIFFALLCLFTFVVQLHIY 133
           GASI +H++IFF L+ +F   V +HIY
Sbjct: 121 GASILVHTIIFFCLITIFLIAVGVHIY 147

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BLAST of MS015393 vs. NCBI nr
Match: PRQ39872.1 (hypothetical protein RchiOBHm_Chr4g0429951 [Rosa chinensis])

HSP 1 Score: 159.1 bits (401), Expect = 2.7e-35
Identity = 81/138 (58.70%), Postives = 101/138 (73.19%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M+DWGPV +AVVLF+LLSPGLLFQV G    +EFGSF TS  +I  HS+++FAL C+F L
Sbjct: 1   MSDWGPVFIAVVLFVLLSPGLLFQVPGRHGCVEFGSFHTSGAAIMVHSLLYFALICVFLL 60

Query: 61  RKK------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSL 120
             K        MADWGPV +AVVLF+LLSPGLLFQ+PG  + VEFGN  TSG SI +H++
Sbjct: 61  AIKVHFYLVVVMADWGPVVIAVVLFVLLSPGLLFQLPGKSRVVEFGNMQTSGLSILVHTI 120

Query: 121 IFFALLCLFTFVVQLHIY 133
           IFF L+ +F   + +HIY
Sbjct: 121 IFFGLITIFLIAIGVHIY 138

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BLAST of MS015393 vs. ExPASy TrEMBL
Match: A0A5B6UN67 (Transmembrane protein OS=Gossypium australe OX=47621 GN=EPI10_013951 PE=4 SV=1)

HSP 1 Score: 162.5 bits (410), Expect = 1.2e-36
Identity = 81/153 (52.94%), Postives = 105/153 (68.63%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M DWGPV V VVLF+LLSPGLLFQ+ G  +F+EF +F+TS  SI  HS+++FAL CIF L
Sbjct: 1   MTDWGPVFVGVVLFVLLSPGLLFQIPGKSRFVEFSNFQTSGPSILVHSVLYFALICIFLL 60

Query: 61  --------------------RKKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFG 120
                                K + M+DWGPVFVAVVLF+LL+PGLL QVPG  + +EFG
Sbjct: 61  AIKLEIIPPSGQHRRVLFPREKDEKMSDWGPVFVAVVLFILLTPGLLIQVPGKSRAIEFG 120

Query: 121 NFHTSGASIFIHSLIFFALLCLFTFVVQLHIYI 134
           NF TSG SI +HS+I+FAL+C+    + +H+Y+
Sbjct: 121 NFQTSGVSILVHSIIYFALICILLLAIGIHMYV 153

[Close]
BLAST of MS015393 vs. ExPASy TrEMBL
Match: A0A6P4B5Q9 (uncharacterized protein LOC107427943 OS=Ziziphus jujuba OX=326968 GN=LOC107427943 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 1.0e-35
Identity = 79/140 (56.43%), Postives = 101/140 (72.14%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M+DWGPV VAVVLFILL+PGLL Q+ G  +F+EFG+F+TS  SI  HS+++FAL CIF L
Sbjct: 1   MSDWGPVFVAVVLFILLTPGLLIQIPGKSRFVEFGNFQTSGVSILVHSVLYFALICIFLL 60

Query: 61  R--------KKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIH 120
                        MADW PV + VVLF+LL PGLLFQ PGHH+ +EFG+  T+G +I +H
Sbjct: 61  AIGVHIFSGFSSAMADWAPVVIGVVLFVLLQPGLLFQFPGHHKQLEFGSMKTNGKAIAVH 120

Query: 121 SLIFFALLCLFTFVVQLHIY 133
           +LIFFAL C+F   + +HIY
Sbjct: 121 TLIFFALYCIFILALHVHIY 140

[Close]
BLAST of MS015393 vs. ExPASy TrEMBL
Match: A0A2P6R0B8 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0429951 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35
Identity = 81/138 (58.70%), Postives = 101/138 (73.19%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M+DWGPV +AVVLF+LLSPGLLFQV G    +EFGSF TS  +I  HS+++FAL C+F L
Sbjct: 1   MSDWGPVFIAVVLFVLLSPGLLFQVPGRHGCVEFGSFHTSGAAIMVHSLLYFALICVFLL 60

Query: 61  RKK------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSL 120
             K        MADWGPV +AVVLF+LLSPGLLFQ+PG  + VEFGN  TSG SI +H++
Sbjct: 61  AIKVHFYLVVVMADWGPVVIAVVLFVLLSPGLLFQLPGKSRVVEFGNMQTSGLSILVHTI 120

Query: 121 IFFALLCLFTFVVQLHIY 133
           IFF L+ +F   + +HIY
Sbjct: 121 IFFGLITIFLIAIGVHIY 138

[Close]
BLAST of MS015393 vs. ExPASy TrEMBL
Match: A0A022S0H1 (Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a025760mg PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.2e-35
Identity = 80/137 (58.39%), Postives = 100/137 (72.99%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M+DWGPV VAVVLF+LL+PGLL QV G  +F+EFG+F+TS  SI  H+II+F L CI  L
Sbjct: 1   MSDWGPVFVAVVLFVLLTPGLLIQVPGRSRFVEFGNFQTSGVSILVHAIIYFVLICILLL 60

Query: 61  R-----KKKTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLI 120
                 KK  MADWGPV + VVLF+LL PGLLFQ+PG ++ VEFG   T+G +I +H+LI
Sbjct: 61  AIGVHIKKGLMADWGPVLIGVVLFILLQPGLLFQIPGKNRHVEFGTMKTNGKAIAVHTLI 120

Query: 121 FFALLCLFTFVVQLHIY 133
           FFA   + TF V +HIY
Sbjct: 121 FFAFYAVLTFAVHVHIY 137

[Close]
BLAST of MS015393 vs. ExPASy TrEMBL
Match: A0A2I0IER0 (Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_037334 PE=4 SV=1)

HSP 1 Score: 154.8 bits (390), Expect = 2.5e-34
Identity = 74/134 (55.22%), Postives = 101/134 (75.37%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M +WGPV V+V+L++LL+PGLLFQV G  + +EFG+F TS  SI  HS+++F L C+F L
Sbjct: 1   MENWGPVFVSVLLYVLLTPGLLFQVPGHQRCIEFGNFRTSGASILIHSLLYFGLICVFLL 60

Query: 61  RKKK--TMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFA 120
             K    MADWGPV +AVVLF+LLSPGLLFQ+PG H+ ++FG+  TSG SI +H++IFF 
Sbjct: 61  AIKVHFLMADWGPVVIAVVLFVLLSPGLLFQLPGKHRIIQFGSMQTSGISILVHTIIFFG 120

Query: 121 LLCLFTFVVQLHIY 133
           L+ +F   + +HIY
Sbjct: 121 LITIFLIAIGVHIY 134

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BLAST of MS015393 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 137.9 bits (346), Expect = 6.0e-33
Identity = 70/140 (50.00%), Postives = 96/140 (68.57%), Query Frame = 0 

Query: 1   MADWGPVVVAVVLFILLSPGLLFQVHGSDKFLEFGSFETSATSIFFHSIIFFALFCIFNL 60
           M DWGPV VAV LF+LL+PGLL QV G  + +EFG+F+TS  S+  H++I+F L CI  L
Sbjct: 1   MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61  RKK--------KTMADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIH 120
             +         +MADW PV V VVLF++LSPGLLF +PG+++ V+FG   T+G +I +H
Sbjct: 61  ALQIHICNLFSTSMADWAPVLVGVVLFVILSPGLLFSLPGNNRTVDFGGLKTNGKAIAVH 120

Query: 121 SLIFFALLCLFTFVVQLHIY 133
           +LIFFA+  +    + LHIY
Sbjct: 121 TLIFFAIYTILILALNLHIY 140

[Close]
BLAST of MS015393 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19
Identity = 43/67 (64.18%), Postives = 55/67 (82.09%), Query Frame = 0 

Query: 66  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 125
           MADWGPV VAV+LF+LL+PGLLFQ+P   + VEFGN  TSGASI +H++IFF L+ +FT 
Sbjct: 1   MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 126 VVQLHIY 133
            ++LHIY
Sbjct: 61  AIRLHIY 67

[Close]
BLAST of MS015393 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 92.4 bits (228), Expect = 2.9e-19
Identity = 39/68 (57.35%), Postives = 57/68 (83.82%), Query Frame = 0 

Query: 66  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 125
           M+DWGPV V V+LF++L+PGLLFQ+PG  ++VEFGNF TS  S+ +HSL++F+L+C+F  
Sbjct: 1   MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 126 VVQLHIYI 134
            +++HIYI
Sbjct: 61  ALKIHIYI 68

[Close]
BLAST of MS015393 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 90.9 bits (224), Expect = 8.4e-19
Identity = 41/67 (61.19%), Postives = 54/67 (80.60%), Query Frame = 0 

Query: 66  MADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTF 125
           MADWGPV +AV+LF++LSPGLLFQ+P   + VEFGN  TSGASI +H++IFF L+ +FT 
Sbjct: 1   MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 126 VVQLHIY 133
            + +HIY
Sbjct: 61  AINVHIY 67

[Close]
BLAST of MS015393 vs. TAIR 10
Match: AT5G40980.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 80.9 bits (198), Expect = 8.7e-16
Identity = 37/66 (56.06%), Postives = 50/66 (75.76%), Query Frame = 0 

Query: 67  ADWGPVFVAVVLFLLLSPGLLFQVPGHHQFVEFGNFHTSGASIFIHSLIFFALLCLFTFV 126
           ADWGPV VAV LF+LLSPGLLFQ+P   + +EFGN  TSG SI +H++I+F +L +    
Sbjct: 3   ADWGPVIVAVALFILLSPGLLFQLPARTRVMEFGNMSTSGISILVHAIIYFCILTILIIA 62

Query: 127 VQLHIY 133
           +Q+HI+
Sbjct: 63  IQIHIH 68

The following BLAST results are available for this feature:
BLAST of MS015393 vs. NCBI nr
Match NameE-valueIdentityDescription
KAA3459460.12.4e-3652.94transmembrane protein [Gossypium australe][more]
XP_021644306.14.1e-3657.75uncharacterized protein LOC110638161 [Hevea brasiliensis][more]
XP_015893840.12.1e-3556.43uncharacterized protein LOC107427943 [Ziziphus jujuba][more]
XP_039156196.12.7e-3555.10uncharacterized protein LOC104417744 [Eucalyptus grandis][more]
PRQ39872.12.7e-3558.70hypothetical protein RchiOBHm_Chr4g0429951 [Rosa chinensis][more]
BLAST of MS015393 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS015393 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5B6UN671.2e-3652.94Transmembrane protein OS=Gossypium australe OX=47621 GN=EPI10_013951 PE=4 SV=1[more]
A0A6P4B5Q91.0e-3556.43uncharacterized protein LOC107427943 OS=Ziziphus jujuba OX=326968 GN=LOC10742794... [more]
A0A2P6R0B81.3e-3558.70Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0429951 PE=4... [more]
A0A022S0H12.2e-3558.39Uncharacterized protein OS=Erythranthe guttata OX=4155 GN=MIMGU_mgv1a025760mg PE... [more]
A0A2I0IER02.5e-3455.22Uncharacterized protein OS=Punica granatum OX=22663 GN=CRG98_037334 PE=4 SV=1[more]
BLAST of MS015393 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27030.16.0e-3350.00unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G48660.11.7e-1964.18Protein of unknown function (DUF 3339) [more]
AT5G08391.12.9e-1957.35Protein of unknown function (DUF 3339) [more]
AT5G63500.18.4e-1961.19Protein of unknown function (DUF 3339) [more]
AT5G40980.18.7e-1656.06Protein of unknown function (DUF 3339) [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021775Protein of unknown function DUF3339PFAMPF11820DUF3339coord: 66..132
e-value: 2.6E-31
score: 107.6
coord: 1..60
e-value: 8.7E-27
score: 93.1
IPR021775Protein of unknown function DUF3339PANTHERPTHR33128OS05G0103400 PROTEINcoord: 1..60
IPR021775Protein of unknown function DUF3339PANTHERPTHR33128OS05G0103400 PROTEINcoord: 66..133
NoneNo IPR availablePANTHERPTHR33128:SF55PROTEIN, PUTATIVE (DUF 3339)-RELATEDcoord: 1..60
NoneNo IPR availablePANTHERPTHR33128:SF55PROTEIN, PUTATIVE (DUF 3339)-RELATEDcoord: 66..133

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS015393.1MS015393.1mRNA