MS015366 (gene) Bitter gourd (TR) v1

Overview


Name	MS015366
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein of unknown function (DUF1218)
Location	scaffold2: 2900859 .. 2901615 (+)
RNA-Seq Expression	MS015366
Synteny	MS015366

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGTTTCTGCTATTGTATTGGCCACCATCACTTCTCTGCATCTCATCGCCTTCGTCCTCGCCGTCGGCTCCGAGCGCCGCCGCAGCACGGTACATTTCTGTTTCTTTACCTCTCTGTTTCAGAGACCCTTTTCATCAATGGCTTTTTCCCTTTTTTGGGTGTTTGTTTGAAGGCCAAGGTTGTGCCGGATGAGTACGACGAGCAGACGTACTGCGTGTACGGCACCGACGCGTCGACGGTGTACGGACTGTCGGCGTTCGGTTTGCTTCTGATAAGCCAGACGGTGGTTAACGGCGTGACCAAGTGTCTGTGCTGTGGGAAAGGTTTAATCAGCGGATCAAAAACCACCGCCGTCGCCATTTTCTTCTTCGTATTCTCCTGGTACTTAATTACAGATTTTGGGTTTTCAATTTTCAAATTGCGCGTTTGAATTGGATTGATTTCGGGAGGGATTTGTTTAGGATGGGGTTTGTGGGAGCGGAGATTTGCCTGCTGGCGGGATCGGCGAGGAACGCGTACCACACCAAGTACAGGGCGGCGTTCGGCGGGGAAAATCTGTCGTGTGCGACGCTGCGGAAGGGGGTGTTCGCCGGCGCCGGCGCCATGACGGTGGTGTCGTTGGTGGGGTCGGTTGTGTACTACGTGGCGCACTCGAGGGCCGACACCGGAGGATGGGTGAAGCAGCGGCGGAATGAGAATGAGAATGATGGGCTGCCCATGGCGGCGGCGCCTTACGATCTGAAACAGAACGCC

mRNA sequence

ATGGCGGTTTCTGCTATTGTATTGGCCACCATCACTTCTCTGCATCTCATCGCCTTCGTCCTCGCCGTCGGCTCCGAGCGCCGCCGCAGCACGGCCAAGGTTGTGCCGGATGAGTACGACGAGCAGACGTACTGCGTGTACGGCACCGACGCGTCGACGGTGTACGGACTGTCGGCGTTCGGTTTGCTTCTGATAAGCCAGACGGTGGTTAACGGCGTGACCAAGTGTCTGTGCTGTGGGAAAGGTTTAATCAGCGGATCAAAAACCACCGCCGTCGCCATTTTCTTCTTCGTATTCTCCTGGATGGGGTTTGTGGGAGCGGAGATTTGCCTGCTGGCGGGATCGGCGAGGAACGCGTACCACACCAAGTACAGGGCGGCGTTCGGCGGGGAAAATCTGTCGTGTGCGACGCTGCGGAAGGGGGTGTTCGCCGGCGCCGGCGCCATGACGGTGGTGTCGTTGGTGGGGTCGGTTGTGTACTACGTGGCGCACTCGAGGGCCGACACCGGAGGATGGGTGAAGCAGCGGCGGAATGAGAATGAGAATGATGGGCTGCCCATGGCGGCGGCGCCTTACGATCTGAAACAGAACGCC

Coding sequence (CDS)

ATGGCGGTTTCTGCTATTGTATTGGCCACCATCACTTCTCTGCATCTCATCGCCTTCGTCCTCGCCGTCGGCTCCGAGCGCCGCCGCAGCACGGCCAAGGTTGTGCCGGATGAGTACGACGAGCAGACGTACTGCGTGTACGGCACCGACGCGTCGACGGTGTACGGACTGTCGGCGTTCGGTTTGCTTCTGATAAGCCAGACGGTGGTTAACGGCGTGACCAAGTGTCTGTGCTGTGGGAAAGGTTTAATCAGCGGATCAAAAACCACCGCCGTCGCCATTTTCTTCTTCGTATTCTCCTGGATGGGGTTTGTGGGAGCGGAGATTTGCCTGCTGGCGGGATCGGCGAGGAACGCGTACCACACCAAGTACAGGGCGGCGTTCGGCGGGGAAAATCTGTCGTGTGCGACGCTGCGGAAGGGGGTGTTCGCCGGCGCCGGCGCCATGACGGTGGTGTCGTTGGTGGGGTCGGTTGTGTACTACGTGGCGCACTCGAGGGCCGACACCGGAGGATGGGTGAAGCAGCGGCGGAATGAGAATGAGAATGATGGGCTGCCCATGGCGGCGGCGCCTTACGATCTGAAACAGAACGCC

Protein sequence

MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAFGLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAYHTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNENENDGLPMAAAPYDLKQNA

Homology

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BLAST of MS015366 vs. NCBI nr
Match: XP_022150597.1 (uncharacterized protein LOC111018695 [Momordica charantia])

HSP 1 Score: 384.4 bits (986), Expect = 5.9e-103
Identity = 197/198 (99.49%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MAVSAIVLATITSLHLIAFVLAVG+ERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF
Sbjct: 4   MAVSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 63

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY
Sbjct: 64  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 123

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN
Sbjct: 124 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 183

Query: 181 ENDGLPMAAAPYDLKQNA 199
           ENDGLPMAAAPYDLKQNA
Sbjct: 184 ENDGLPMAAAPYDLKQNA 201

[Close]

BLAST of MS015366 vs. NCBI nr
Match: KAG6601276.1 (hypothetical protein SDJN03_06509, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 310.8 bits (795), Expect = 8.2e-81
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TITSLHLIAFVLAVG+ERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 500 MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 559

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG K T VAIFFFVFSW+ FVGAEI LLAGSARNAY
Sbjct: 560 GLLLISQAVVNGVTRCFCCGKGLISG-KATTVAIFFFVFSWISFVGAEIGLLAGSARNAY 619

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAAFGGE+LSCATLRKGVFAGAGAMTV+S+VGS++YY AHS+ADTGGW KQ   +N
Sbjct: 620 HTKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQ---QN 679

Query: 181 ENDGLPMAAAPYDLKQNA 199
           E  G+ +AA  +DLKQNA
Sbjct: 680 EG-GVGLAAPAHDLKQNA 692

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BLAST of MS015366 vs. NCBI nr
Match: XP_022986328.1 (uncharacterized protein LOC111484079 [Cucurbita maxima])

HSP 1 Score: 310.5 bits (794), Expect = 1.1e-80
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TITSLHLIAFVLAVG+ERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG K T VAIFFFVFSW+ FVGAEI LLAGSARNAY
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISG-KATTVAIFFFVFSWISFVGAEIGLLAGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAAFGGE+LSCATLRKGVFAGAGAMTV+S+VGS++YY AHS+ADTGGW KQ   +N
Sbjct: 121 HTKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQ---QN 180

Query: 181 ENDGLPMAAAPYDLKQNA 199
           E  G+ +AA  +DLKQNA
Sbjct: 181 EG-GVGLAAPVHDLKQNA 193

[Close]

BLAST of MS015366 vs. NCBI nr
Match: XP_022957387.1 (uncharacterized protein LOC111458800 isoform X1 [Cucurbita moschata] >KAG7032063.1 hypothetical protein SDJN02_06106 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 309.7 bits (792), Expect = 1.8e-80
Identity = 165/198 (83.33%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TITSLHLIAFVLAVG+ERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG K T VAIFFFVFSW+ FVGAEI LLAGSARNAY
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISG-KATTVAIFFFVFSWISFVGAEIGLLAGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAAFGGE+LSCATLRKGVFAGAGAMTV+S+VGS+ YY AHS+ADTGGW KQ   +N
Sbjct: 121 HTKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQ---QN 180

Query: 181 ENDGLPMAAAPYDLKQNA 199
           E  G+ +AA  +DLKQNA
Sbjct: 181 EG-GVGLAAPAHDLKQNA 193

[Close]

BLAST of MS015366 vs. NCBI nr
Match: XP_023514518.1 (uncharacterized protein LOC111778772 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 308.1 bits (788), Expect = 5.3e-80
Identity = 164/198 (82.83%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TITSLHLIAFVLAVG+ERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG K T VAIFFFVFSW+ FVGAEI LLAGSARNAY
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISG-KATTVAIFFFVFSWISFVGAEIGLLAGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAA GGE+LSCATLRKGVFAGAGAMTV+S+VGS++YY AHS+ADTGGW KQ   +N
Sbjct: 121 HTKYRAAIGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQ---QN 180

Query: 181 ENDGLPMAAAPYDLKQNA 199
           E  G+ +AA  +DLKQNA
Sbjct: 181 EG-GVGLAAPVHDLKQNA 193

[Close]

BLAST of MS015366 vs. ExPASy TrEMBL
Match: A0A6J1DB56 (uncharacterized protein LOC111018695 OS=Momordica charantia OX=3673 GN=LOC111018695 PE=4 SV=1)

HSP 1 Score: 384.4 bits (986), Expect = 2.8e-103
Identity = 197/198 (99.49%), Postives = 198/198 (100.00%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MAVSAIVLATITSLHLIAFVLAVG+ERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF
Sbjct: 4   MAVSAIVLATITSLHLIAFVLAVGAERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 63

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY
Sbjct: 64  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 123

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN
Sbjct: 124 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 183

Query: 181 ENDGLPMAAAPYDLKQNA 199
           ENDGLPMAAAPYDLKQNA
Sbjct: 184 ENDGLPMAAAPYDLKQNA 201

[Close]

BLAST of MS015366 vs. ExPASy TrEMBL
Match: A0A6J1JG73 (uncharacterized protein LOC111484079 OS=Cucurbita maxima OX=3661 GN=LOC111484079 PE=4 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 5.2e-81
Identity = 165/198 (83.33%), Postives = 179/198 (90.40%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TITSLHLIAFVLAVG+ERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG K T VAIFFFVFSW+ FVGAEI LLAGSARNAY
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISG-KATTVAIFFFVFSWISFVGAEIGLLAGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAAFGGE+LSCATLRKGVFAGAGAMTV+S+VGS++YY AHS+ADTGGW KQ   +N
Sbjct: 121 HTKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSILYYWAHSKADTGGWQKQ---QN 180

Query: 181 ENDGLPMAAAPYDLKQNA 199
           E  G+ +AA  +DLKQNA
Sbjct: 181 EG-GVGLAAPVHDLKQNA 193

[Close]

BLAST of MS015366 vs. ExPASy TrEMBL
Match: A0A6J1GYZ6 (uncharacterized protein LOC111458800 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458800 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 8.9e-81
Identity = 165/198 (83.33%), Postives = 178/198 (89.90%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MA+SAIVL TITSLHLIAFVLAVG+ERRRSTAKVVPDEYDE TYCVYGTDASTVYGLSAF
Sbjct: 1   MALSAIVLVTITSLHLIAFVLAVGAERRRSTAKVVPDEYDEYTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG K T VAIFFFVFSW+ FVGAEI LLAGSARNAY
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISG-KATTVAIFFFVFSWISFVGAEIGLLAGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRAAFGGE+LSCATLRKGVFAGAGAMTV+S+VGS+ YY AHS+ADTGGW KQ   +N
Sbjct: 121 HTKYRAAFGGEDLSCATLRKGVFAGAGAMTVLSMVGSISYYWAHSKADTGGWQKQ---QN 180

Query: 181 ENDGLPMAAAPYDLKQNA 199
           E  G+ +AA  +DLKQNA
Sbjct: 181 EG-GVGLAAPAHDLKQNA 193

[Close]

BLAST of MS015366 vs. ExPASy TrEMBL
Match: A0A0A0KWH0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610400 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 155/196 (79.08%), Postives = 169/196 (86.22%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MAVSAIVLATITSLHLIAFVLAVG+ERRRSTA +VPDEYDE+TYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATITSLHLIAFVLAVGAERRRSTANIVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG KTT VAIFFFVFSW+ F+GAEI LLAGSARNAY
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISG-KTTTVAIFFFVFSWISFIGAEIGLLAGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRA FG E LSCATLRKGVFAGA AMTV+S+VGS++YY  HS+ADTGGW K + NE 
Sbjct: 121 HTKYRATFGVEKLSCATLRKGVFAGAAAMTVLSMVGSILYYWMHSKADTGGWEKHQNNEG 180

Query: 181 ENDGLPMAAAPYDLKQ 197
              G+  A     +KQ
Sbjct: 181 V--GMGTAGVHLHMKQ 193

[Close]

BLAST of MS015366 vs. ExPASy TrEMBL
Match: A0A5D3CD50 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G001250 PE=4 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75
Identity = 156/197 (79.19%), Postives = 172/197 (87.31%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MAVSAIVLATI SLHLIAFVLAVG+ERRRSTA VVPDEYDE+TYCVYGTDASTVYGLSAF
Sbjct: 1   MAVSAIVLATIASLHLIAFVLAVGAERRRSTANVVPDEYDEKTYCVYGTDASTVYGLSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLLISQ VVNGVT+C CCGKGLISG KTT VAIFFFVFSW+ F+GAEI LLAGSARNAY
Sbjct: 61  GLLLISQAVVNGVTRCFCCGKGLISG-KTTTVAIFFFVFSWISFIGAEIGLLAGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTKYRA FG E LSCATLRKGVFAGA AMTV+S+VGS+++Y  HS+ADTGGW K   ++N
Sbjct: 121 HTKYRATFGVEKLSCATLRKGVFAGAAAMTVLSMVGSILFYWMHSKADTGGWEK---HQN 180

Query: 181 ENDGLPMAAAPY-DLKQ 197
           E  G+  AA  + D+KQ
Sbjct: 181 EGVGMGAAAGVHLDMKQ 193

[Close]

BLAST of MS015366 vs. TAIR 10
Match: AT1G68220.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 232.6 bits (592), Expect = 2.7e-61
Identity = 116/185 (62.70%), Postives = 144/185 (77.84%), Query Frame = 0


Query: 1   MAVSAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAF 60
           MAVS  +L  +T+LHL+AFV A G+ERRRSTA  VPD+YDE+T C YGT+ASTVYG+SAF
Sbjct: 1   MAVSVSILTVVTALHLLAFVFAFGAERRRSTAVPVPDQYDEKTICKYGTEASTVYGMSAF 60

Query: 61  GLLLISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAY 120
           GLLL+SQ VVNGVTKCLC GKGL++G+  T  AI FFV SW+ F+GAE CLL GSARNAY
Sbjct: 61  GLLLVSQAVVNGVTKCLCFGKGLVTGTSYTVWAIVFFVVSWVSFLGAEACLLGGSARNAY 120

Query: 121 HTKYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTGGWVKQRRNEN 180
           HTK    + G+ LSCA L  GVFA   A T++SL+ +++YY+AHS+ADTGGW K     +
Sbjct: 121 HTKSEGIYKGKELSCAVLPVGVFAAGAAFTLMSLIATILYYLAHSKADTGGWEK-----H 180

Query: 181 ENDGL 186
           +NDG+
Sbjct: 181 QNDGI 180

[Close]

BLAST of MS015366 vs. TAIR 10
Match: AT1G52910.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 77/168 (45.83%), Postives = 104/168 (61.90%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAFGLL 63
           S +V+  +  L LIA  LA+ +E+RRS  KVVPD   E  +C YG+D +T YG  AF LL
Sbjct: 3   SKLVIIIVFILDLIAVGLAIAAEQRRSVGKVVPDGEKEFEHCEYGSDIATSYGAGAFVLL 62

Query: 64  LISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAYHTK 123
            ISQ ++   ++C CCGK L  G  + A  I  F+  W+ F+ AE+CLLAGS RNAYHT 
Sbjct: 63  FISQVIIMVASRCFCCGKALKPGG-SRACGIMLFLICWVFFLIAEVCLLAGSIRNAYHTT 122

Query: 124 YRAAFGGEN-LSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRADTG 171
           YR  +  EN  SC  +RKGVFA   +  + + + S  YY+++SRA  G
Sbjct: 123 YRRMWNIENPPSCEVIRKGVFAAGASFALFTAIVSQFYYISYSRARDG 169

[Close]

BLAST of MS015366 vs. TAIR 10
Match: AT3G15480.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 136.3 bits (342), Expect = 2.6e-32
Identity = 77/165 (46.67%), Postives = 103/165 (62.42%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAFGLL 63
           S +V+  +  L LIA  LA+ +E+RRS  KV  D   +  YCVYGTD +T YG  AF LL
Sbjct: 3   SKLVVIIVFILDLIAVGLAIAAEQRRSVGKVETDRDKQYDYCVYGTDIATSYGAGAFVLL 62

Query: 64  LISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAYHTK 123
            +SQ ++   ++C CCGK L  G  + A AI  F+  W+ F+ AE+CLLA S RNAYHT+
Sbjct: 63  FVSQVLIMAASRCFCCGKSLNPGG-SRACAIILFLICWVFFLIAEMCLLAASIRNAYHTQ 122

Query: 124 YRAAFGGEN-LSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRA 168
           YR  +  E+  SC  +RKGVFA   A T+ + + S  YYV +SRA
Sbjct: 123 YRKMWKVEDPPSCEVIRKGVFAAGAAFTLFTAIVSQFYYVCYSRA 166

[Close]

BLAST of MS015366 vs. TAIR 10
Match: AT4G27435.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 135.6 bits (340), Expect = 4.4e-32
Identity = 77/158 (48.73%), Postives = 99/158 (62.66%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAFGLL 63
           S IV A +   +LIAF LAV +E+RRSTA+VV D   +  YCVY +D +T YG+ AF   
Sbjct: 3   SKIVSAIVFVFNLIAFGLAVAAEQRRSTARVVQDTEVQYNYCVYDSDRATGYGVGAFLFS 62

Query: 64  LISQTVVNGVTKCLCCGKGLISGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAYHTK 123
           + SQ ++  V++C CCGK L  G  + A+A+  F+ SWM F+ AEICLLAGS  NAYHTK
Sbjct: 63  VASQILIMLVSRCFCCGKPLKPGG-SRALALILFIVSWMFFLIAEICLLAGSVENAYHTK 122

Query: 124 YRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYY 162
           YR  F      C TLRKGVFA   +    + + S  YY
Sbjct: 123 YRTMFMDNPPDCQTLRKGVFAAGASFVFFNAIVSQFYY 159

[Close]

BLAST of MS015366 vs. TAIR 10
Match: AT1G61065.1 (Protein of unknown function (DUF1218) )

HSP 1 Score: 131.0 bits (328), Expect = 1.1e-30
Identity = 76/165 (46.06%), Postives = 108/165 (65.45%), Query Frame = 0


Query: 4   SAIVLATITSLHLIAFVLAVGSERRRSTAKVVPDEYDEQTYCVYGTDASTVYGLSAFGLL 63
           S ++L  +    LIAF LAV +E+RR+T ++  +  D  +YCVY  D +T  G+ +F +L
Sbjct: 3   SVLLLLLVFVFDLIAFGLAVAAEQRRTTWQISRESRD-LSYCVYDKDIATGLGVGSFLVL 62

Query: 64  LISQTVVNGVTKCLCCGKGLI-SGSKTTAVAIFFFVFSWMGFVGAEICLLAGSARNAYHT 123
           L SQ ++   ++CLCCG+ L  SGS++   AIF F+ +W+ F  A++CLLAGS RNAYHT
Sbjct: 63  LASQLLIMVASRCLCCGRALTPSGSRSW--AIFLFITTWVFFFIAQVCLLAGSVRNAYHT 122

Query: 124 KYRAAFGGENLSCATLRKGVFAGAGAMTVVSLVGSVVYYVAHSRA 168
           KYR  FG  + SC +LRKGVF    A  V++ + S +YYV  SRA
Sbjct: 123 KYRVYFGNTSPSCRSLRKGVFGAGAAFIVLTGIVSELYYVTLSRA 164

The following BLAST results are available for this feature:

BLAST of MS015366 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150597.1	5.9e-103	99.49	uncharacterized protein LOC111018695 [Momordica charantia]	[more]
KAG6601276.1	8.2e-81	83.33	hypothetical protein SDJN03_06509, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022986328.1	1.1e-80	83.33	uncharacterized protein LOC111484079 [Cucurbita maxima]	[more]
XP_022957387.1	1.8e-80	83.33	uncharacterized protein LOC111458800 isoform X1 [Cucurbita moschata] >KAG7032063...	[more]
XP_023514518.1	5.3e-80	82.83	uncharacterized protein LOC111778772 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS015366 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS015366 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DB56	2.8e-103	99.49	uncharacterized protein LOC111018695 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A6J1JG73	5.2e-81	83.33	uncharacterized protein LOC111484079 OS=Cucurbita maxima OX=3661 GN=LOC111484079...	[more]
A0A6J1GYZ6	8.9e-81	83.33	uncharacterized protein LOC111458800 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A0A0KWH0	2.3e-76	79.08	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G610400 PE=4 SV=1	[more]
A0A5D3CD50	1.1e-75	79.19	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of MS015366 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G68220.1	2.7e-61	62.70	Protein of unknown function (DUF1218)	[more]
AT1G52910.1	1.2e-32	45.83	Protein of unknown function (DUF1218)	[more]
AT3G15480.1	2.6e-32	46.67	Protein of unknown function (DUF1218)	[more]
AT4G27435.1	4.4e-32	48.73	Protein of unknown function (DUF1218)	[more]
AT1G61065.1	1.1e-30	46.06	Protein of unknown function (DUF1218)	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009606	Modifying wall lignin-1/2	PFAM	PF06749	DUF1218	coord: 59..154 e-value: 4.2E-24 score: 84.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..198
None	No IPR available	PANTHER	PTHR31769	OS07G0462200 PROTEIN-RELATED	coord: 3..190
None	No IPR available	PANTHER	PTHR31769:SF63	AEROBIC COPROPORPHYRINOGEN-III OXIDASE (DUF1218)	coord: 3..190

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015366.1	MS015366.1	mRNA