MS015334 (gene) Bitter gourd (TR) v1

Overview


Name	MS015334
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Unknown protein
Location	scaffold2: 2656464 .. 2657024 (-)
RNA-Seq Expression	MS015334
Synteny	MS015334

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAATCAAAATACGAAGAAGCGGGAGCGAGTCGACTCGGACGCCGGTTCACCAGAGGTGAAGCGACTCAGAGACGACCTCCTTGGTTTCTTCGACGAGTCAGATCCTGAGCCGGCGACTCAGGACCTCGACTCTTTGATGAGGAGTTTCGAGGAAGAAATCGCCACCGCCCCGTCTTCCACGGTGCCGGTGGTTGATTTGACGTTGGATCCCGGCGAGTCTCAGCCGGAGTTAGGTTATCTTTTGGAAGCCTCCGACGACGAGCTTGGCCTGCCGCCTTCGTCTAGTTCTATTACTTCAAATAGCCAGGAGTTGGACGAACCGGCCGAGTTGGTTCGATTATCGACTGACTCGTCTGAAATCGGCGATTTATGGAGGTTTGAGGATCAGATCCCGAACTATGACGCTTTCGAACTGGAAGCCAGGGATGTGTACAGCGGCGATTCGGCCGAAGCCGAGTATGTGGCTTTCGATGGCCTCTTCGAGTACGCGAATCTATGTTTCGATGCGTCGGATAACTTGGACTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAG

mRNA sequence

ATGGAGAATCAAAATACGAAGAAGCGGGAGCGAGTCGACTCGGACGCCGGTTCACCAGAGGTGAAGCGACTCAGAGACGACCTCCTTGGTTTCTTCGACGAGTCAGATCCTGAGCCGGCGACTCAGGACCTCGACTCTTTGATGAGGAGTTTCGAGGAAGAAATCGCCACCGCCCCGTCTTCCACGGTGCCGGTGGTTGATTTGACGTTGGATCCCGGCGAGTCTCAGCCGGAGTTAGGTTATCTTTTGGAAGCCTCCGACGACGAGCTTGGCCTGCCGCCTTCGTCTAGTTCTATTACTTCAAATAGCCAGGAGTTGGACGAACCGGCCGAGTTGGTTCGATTATCGACTGACTCGTCTGAAATCGGCGATTTATGGAGGTTTGAGGATCAGATCCCGAACTATGACGCTTTCGAACTGGAAGCCAGGGATGTGTACAGCGGCGATTCGGCCGAAGCCGAGTATGTGGCTTTCGATGGCCTCTTCGAGTACGCGAATCTATGTTTCGATGCGTCGGATAACTTGGACTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAG

Coding sequence (CDS)

ATGGAGAATCAAAATACGAAGAAGCGGGAGCGAGTCGACTCGGACGCCGGTTCACCAGAGGTGAAGCGACTCAGAGACGACCTCCTTGGTTTCTTCGACGAGTCAGATCCTGAGCCGGCGACTCAGGACCTCGACTCTTTGATGAGGAGTTTCGAGGAAGAAATCGCCACCGCCCCGTCTTCCACGGTGCCGGTGGTTGATTTGACGTTGGATCCCGGCGAGTCTCAGCCGGAGTTAGGTTATCTTTTGGAAGCCTCCGACGACGAGCTTGGCCTGCCGCCTTCGTCTAGTTCTATTACTTCAAATAGCCAGGAGTTGGACGAACCGGCCGAGTTGGTTCGATTATCGACTGACTCGTCTGAAATCGGCGATTTATGGAGGTTTGAGGATCAGATCCCGAACTATGACGCTTTCGAACTGGAAGCCAGGGATGTGTACAGCGGCGATTCGGCCGAAGCCGAGTATGTGGCTTTCGATGGCCTCTTCGAGTACGCGAATCTATGTTTCGATGCGTCGGATAACTTGGACTTTCTTTGGCGGCAAGAATCTCTGCCGGCGCAG

Protein sequence

MENQNTKKRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLSTDSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWRQESLPAQ

Homology

[Close]

BLAST of MS015334 vs. NCBI nr
Match: XP_022150483.1 (uncharacterized protein LOC111018621 [Momordica charantia])

HSP 1 Score: 364.4 bits (934), Expect = 5.9e-97
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MENQNTKKRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPS 60
           MENQNTKKRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPS
Sbjct: 1   MENQNTKKRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPS 60

Query: 61  STVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLSTDSS 120
           STVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLSTDSS
Sbjct: 61  STVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLSTDSS 120

Query: 121 EIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWR 180
           EIGDLWRFE+QIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWR
Sbjct: 121 EIGDLWRFENQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWR 180

Query: 181 QESLPAQ 188
           QESLPAQ
Sbjct: 181 QESLPAQ 187

[Close]

BLAST of MS015334 vs. NCBI nr
Match: XP_038891554.1 (uncharacterized protein LOC120080940 [Benincasa hispida])

HSP 1 Score: 281.6 bits (719), Expect = 5.1e-72
Identity = 152/190 (80.00%), Postives = 162/190 (85.26%), Query Frame = 0


Query: 1   MENQNTKKRERVD---SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60
           MENQN+KKR+R D   S+AGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT
Sbjct: 1   MENQNSKKRDRDDSAESEAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60

Query: 61  APSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLST 120
           A SS VPVVDLT + GESQPELGYL EASDDELGLPP      SNSQ+     E  R+ST
Sbjct: 61  ASSSPVPVVDLTAESGESQPELGYLFEASDDELGLPP------SNSQQ-----EFARVST 120

Query: 121 DSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDF 180
           DSSEIG++WRFEDQIPNYDAFELE RDVYSG S  AEYVAFDGL EY+NLCFDASDN D+
Sbjct: 121 DSSEIGEMWRFEDQIPNYDAFELEGRDVYSG-SDTAEYVAFDGLLEYSNLCFDASDNSDY 178

Query: 181 LWRQESLPAQ 188
           LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 178

[Close]

BLAST of MS015334 vs. NCBI nr
Match: XP_008446589.1 (PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo] >KAA0034548.1 uncharacterized protein E6C27_scaffold65G005630 [Cucumis melo var. makuwa] >TYK09102.1 uncharacterized protein E5676_scaffold475G00920 [Cucumis melo var. makuwa])

HSP 1 Score: 280.8 bits (717), Expect = 8.6e-72
Identity = 152/190 (80.00%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MENQNTKKRERVD---SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60
           MENQN+KKR+R D   S+ GSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT
Sbjct: 1   MENQNSKKRDRDDSAESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60

Query: 61  APSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLST 120
           A SS VPVVDLT D GESQPELGYLLEASDDELGLPP      SNSQE     E  R+ST
Sbjct: 61  ASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPP------SNSQE-----EFARIST 120

Query: 121 DSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDF 180
           DSS+IG++WRFEDQIPNYDAFELE  DVYSG S  AEYVAFDGL EY+NLCFD+SDN DF
Sbjct: 121 DSSDIGEMWRFEDQIPNYDAFELEGGDVYSG-SDTAEYVAFDGLLEYSNLCFDSSDNSDF 178

Query: 181 LWRQESLPAQ 188
           LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 178

[Close]

BLAST of MS015334 vs. NCBI nr
Match: KAG7013029.1 (hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 280.4 bits (716), Expect = 1.1e-71
Identity = 150/193 (77.72%), Postives = 164/193 (84.97%), Query Frame = 0


Query: 1   MENQNTKKRERVD------SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
           MENQ +KKR+R D      S+ GSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE
Sbjct: 1   MENQISKKRDRDDSAEFTESENGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60

Query: 61  IATAPSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVR 120
           IATA SS VPVVDLT+D GESQPELGYLLEASDDELGLPPS +SI  + +E DE A   R
Sbjct: 61  IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSI--SKEEFDESAVFAR 120

Query: 121 LSTDSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDN 180
           +S+DS E+G++WRFEDQIPNYDAFELE  DVYSG S  AEYVAFDGLFEY+NLC DAS+N
Sbjct: 121 VSSDSLEVGEMWRFEDQIPNYDAFELEGGDVYSG-SDTAEYVAFDGLFEYSNLCLDASEN 180

Query: 181 LDFLWRQESLPAQ 188
            DFLWRQESLPAQ
Sbjct: 181 SDFLWRQESLPAQ 190

[Close]

BLAST of MS015334 vs. NCBI nr
Match: KAG6573972.1 (hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 279.6 bits (714), Expect = 1.9e-71
Identity = 150/193 (77.72%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MENQNTKKRERVD------SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
           MENQ +KKR+R D      S+ GSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE
Sbjct: 1   MENQISKKRDRDDSAEFTESENGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60

Query: 61  IATAPSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVR 120
           IATA SS VPVVDLT+D GESQPELGYLLEASDDELGLPPS +SI  + +E DE A   R
Sbjct: 61  IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSI--SKEEFDESAVFAR 120

Query: 121 LSTDSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDN 180
           +S DS E+G++WRFEDQIPNYDAFELE  DVYSG S  AEYVAFDGLFEY+NLC DAS+N
Sbjct: 121 VSCDSLEVGEMWRFEDQIPNYDAFELEGGDVYSG-SDTAEYVAFDGLFEYSNLCLDASEN 180

Query: 181 LDFLWRQESLPAQ 188
            DFLWRQESLPAQ
Sbjct: 181 SDFLWRQESLPAQ 190

[Close]

BLAST of MS015334 vs. ExPASy TrEMBL
Match: A0A6J1D9K5 (uncharacterized protein LOC111018621 OS=Momordica charantia OX=3673 GN=LOC111018621 PE=4 SV=1)

HSP 1 Score: 364.4 bits (934), Expect = 2.9e-97
Identity = 186/187 (99.47%), Postives = 187/187 (100.00%), Query Frame = 0


Query: 1   MENQNTKKRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPS 60
           MENQNTKKRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPS
Sbjct: 1   MENQNTKKRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPS 60

Query: 61  STVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLSTDSS 120
           STVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLSTDSS
Sbjct: 61  STVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLSTDSS 120

Query: 121 EIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWR 180
           EIGDLWRFE+QIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWR
Sbjct: 121 EIGDLWRFENQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWR 180

Query: 181 QESLPAQ 188
           QESLPAQ
Sbjct: 181 QESLPAQ 187

[Close]

BLAST of MS015334 vs. ExPASy TrEMBL
Match: A0A5A7SV83 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G00920 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.2e-72
Identity = 152/190 (80.00%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MENQNTKKRERVD---SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60
           MENQN+KKR+R D   S+ GSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT
Sbjct: 1   MENQNSKKRDRDDSAESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60

Query: 61  APSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLST 120
           A SS VPVVDLT D GESQPELGYLLEASDDELGLPP      SNSQE     E  R+ST
Sbjct: 61  ASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPP------SNSQE-----EFARIST 120

Query: 121 DSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDF 180
           DSS+IG++WRFEDQIPNYDAFELE  DVYSG S  AEYVAFDGL EY+NLCFD+SDN DF
Sbjct: 121 DSSDIGEMWRFEDQIPNYDAFELEGGDVYSG-SDTAEYVAFDGLLEYSNLCFDSSDNSDF 178

Query: 181 LWRQESLPAQ 188
           LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 178

[Close]

BLAST of MS015334 vs. ExPASy TrEMBL
Match: A0A1S3BEX2 (uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=4 SV=1)

HSP 1 Score: 280.8 bits (717), Expect = 4.2e-72
Identity = 152/190 (80.00%), Postives = 161/190 (84.74%), Query Frame = 0


Query: 1   MENQNTKKRERVD---SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60
           MENQN+KKR+R D   S+ GSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT
Sbjct: 1   MENQNSKKRDRDDSAESETGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIAT 60

Query: 61  APSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVRLST 120
           A SS VPVVDLT D GESQPELGYLLEASDDELGLPP      SNSQE     E  R+ST
Sbjct: 61  ASSSPVPVVDLTADSGESQPELGYLLEASDDELGLPP------SNSQE-----EFARIST 120

Query: 121 DSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDF 180
           DSS+IG++WRFEDQIPNYDAFELE  DVYSG S  AEYVAFDGL EY+NLCFD+SDN DF
Sbjct: 121 DSSDIGEMWRFEDQIPNYDAFELEGGDVYSG-SDTAEYVAFDGLLEYSNLCFDSSDNSDF 178

Query: 181 LWRQESLPAQ 188
           LWRQESLPAQ
Sbjct: 181 LWRQESLPAQ 178

[Close]

BLAST of MS015334 vs. ExPASy TrEMBL
Match: A0A6J1HYB6 (uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.6e-71
Identity = 148/193 (76.68%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MENQNTKKRERVD------SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
           MENQ +KKR+R D      S+ GSPEVKRLRDDLLGFFDESDPEPATQ+LDSLMRSFEEE
Sbjct: 1   MENQISKKRDRDDSAEFTESENGSPEVKRLRDDLLGFFDESDPEPATQELDSLMRSFEEE 60

Query: 61  IATAPSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVR 120
           IATA SS  PVVDLT++ GESQPELGYLLEASDDELGLPPS +SI  + +E DE A   R
Sbjct: 61  IATASSSPAPVVDLTVESGESQPELGYLLEASDDELGLPPSVTSI--SKEEFDESAVFAR 120

Query: 121 LSTDSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDN 180
           +STDS E+G++WRFEDQIPNYDAFELE  DVYSG S  AEYVAFDGLFEY+NLC DAS+N
Sbjct: 121 VSTDSLEVGEMWRFEDQIPNYDAFELEGGDVYSG-SDTAEYVAFDGLFEYSNLCLDASEN 180

Query: 181 LDFLWRQESLPAQ 188
            DFLWRQESLPAQ
Sbjct: 181 SDFLWRQESLPAQ 190

[Close]

BLAST of MS015334 vs. ExPASy TrEMBL
Match: A0A6J1G1T4 (uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC111449910 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.6e-71
Identity = 149/193 (77.20%), Postives = 163/193 (84.46%), Query Frame = 0


Query: 1   MENQNTKKRERVD------SDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60
           MENQ +KKR+R D      S+ GS EVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE
Sbjct: 1   MENQISKKRDRDDSAEFTESENGSSEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEE 60

Query: 61  IATAPSSTVPVVDLTLDPGESQPELGYLLEASDDELGLPPSSSSITSNSQELDEPAELVR 120
           IATA SS VPVVDLT+D GESQPELGYLLEASDDELGLPPS +SI  + +E DE A   R
Sbjct: 61  IATASSSPVPVVDLTVDSGESQPELGYLLEASDDELGLPPSVTSI--SKEEFDESAVFAR 120

Query: 121 LSTDSSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDN 180
           +S+DS E+G++WRFEDQIPNYDAFELE  DVYSG S  AEYVAFDGLFEY+NLC DAS+N
Sbjct: 121 VSSDSLEVGEMWRFEDQIPNYDAFELEGGDVYSG-SDTAEYVAFDGLFEYSNLCLDASEN 180

Query: 181 LDFLWRQESLPAQ 188
            DFLWRQESLPAQ
Sbjct: 181 SDFLWRQESLPAQ 190

[Close]

BLAST of MS015334 vs. TAIR 10
Match: AT1G13360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1); Has 69 Blast hits to 69 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 150.2 bits (378), Expect = 1.6e-36
Identity = 91/189 (48.15%), Postives = 118/189 (62.43%), Query Frame = 0


Query: 7   KKRERVDS----DAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPSST 66
           KKR R +S       SPEVKRLRDDL    D+SDPEP +QDLDS+M+SFE+E++T  ++T
Sbjct: 16  KKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTTTT 75

Query: 67  VPVVDLTLDPGESQPELGYLLEASDDELGLPPSSS----SITSNSQELDEPAELVRLSTD 126
                 +   GE+QP+LGYLLEASDDELGLPP  S     +       +   +LVR S+D
Sbjct: 76  ---AQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSD 135

Query: 127 SSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFL 186
           SS I ++W FED + NY        D  SG     +YVA +GLFE+++ CFD+ D   F 
Sbjct: 136 SSGIDEIWGFEDHVSNYGGL-----DFGSGVGDGGDYVAVEGLFEFSDDCFDSGDL--FS 194

Query: 187 WRQESLPAQ 188
           WR ESLPA+
Sbjct: 196 WRSESLPAE 194

[Close]

BLAST of MS015334 vs. TAIR 10
Match: AT1G13360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 124.8 bits (312), Expect = 7.4e-29
Identity = 78/166 (46.99%), Postives = 100/166 (60.24%), Query Frame = 0


Query: 7   KKRERVDS----DAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPSST 66
           KKR R +S       SPEVKRLRDDL    D+SDPEP +QDLDS+M+SFE+E++T  ++T
Sbjct: 16  KKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTTTT 75

Query: 67  VPVVDLTLDPGESQPELGYLLEASDDELGLPPSSS----SITSNSQELDEPAELVRLSTD 126
                 +   GE+QP+LGYLLEASDDELGLPP  S     +       +   +LVR S+D
Sbjct: 76  ---AQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSD 135

Query: 127 SSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEY 165
           SS I ++W FED + NY        D  SG     +YVA +G F Y
Sbjct: 136 SSGIDEIWGFEDHVSNYGGL-----DFGSGVGDGGDYVAVEGFFYY 173

[Close]

BLAST of MS015334 vs. TAIR 10
Match: AT1G13360.3 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G25870.1). )

HSP 1 Score: 124.8 bits (312), Expect = 7.4e-29
Identity = 78/170 (45.88%), Postives = 102/170 (60.00%), Query Frame = 0


Query: 7   KKRERVDS----DAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPSST 66
           KKR R +S       SPEVKRLRDDL    D+SDPEP +QDLDS+M+SFE+E++T  ++T
Sbjct: 16  KKRVRDESFDEAVLDSPEVKRLRDDLFDVLDDSDPEPVSQDLDSVMKSFEDELSTVTTTT 75

Query: 67  VPVVDLTLDPGESQPELGYLLEASDDELGLPPSSS----SITSNSQELDEPAELVRLSTD 126
                 +   GE+QP+LGYLLEASDDELGLPP  S     +       +   +LVR S+D
Sbjct: 76  ---AQGSSTAGETQPDLGYLLEASDDELGLPPPPSISPVPVAKEEVTTETVTDLVRASSD 135

Query: 127 SSEIGDLWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLC 169
           SS I ++W FED + NY        D  SG     +YVA +GL  + + C
Sbjct: 136 SSGIDEIWGFEDHVSNYGGL-----DFGSGVGDGGDYVAVEGLSFFHSFC 177

[Close]

BLAST of MS015334 vs. TAIR 10
Match: AT3G25870.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13360.1); Has 50 Blast hits to 50 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 50; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 122.5 bits (306), Expect = 3.7e-28
Identity = 84/183 (45.90%), Postives = 108/183 (59.02%), Query Frame = 0


Query: 8   KRERVDSDAGSPEVKRLRDDLLGFFDESDPEPATQDLDSLMRSFEEEIATAPSSTVPVVD 67
           KR R   D  SP+VKRLRDDL   FD+S  +P +QDLDS+M+SFE E++T  ++      
Sbjct: 18  KRVRDGLDLDSPDVKRLRDDL---FDDSGLDPVSQDLDSVMKSFENELSTTTAA------ 77

Query: 68  LTLDPGESQPELGYLLEASDDELGLPP---SSSSITSNSQELDEPAELVRLSTDSSEIGD 127
             L  GE+QP+LGYL EASDDELGLPP      ++   S E +   ELVR S+DSSE+G+
Sbjct: 78  --LSSGETQPDLGYLFEASDDELGLPPPLTPPQTLLPPSCE-ETVTELVRASSDSSEVGE 137

Query: 128 LWRFEDQIPNYDAFELEARDVYSGDSAEAEYVAFDGLFEYANLCFDASDNLDFLWRQESL 187
           L  FED +  +   +L       GD         DGLFEY + C D+ D   F WR E L
Sbjct: 138 LCGFEDHVTEFGPCDL-------GD---------DGLFEYFDGCLDSGDL--FSWRPEFL 170

The following BLAST results are available for this feature:

BLAST of MS015334 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022150483.1	5.9e-97	99.47	uncharacterized protein LOC111018621 [Momordica charantia]	[more]
XP_038891554.1	5.1e-72	80.00	uncharacterized protein LOC120080940 [Benincasa hispida]	[more]
XP_008446589.1	8.6e-72	80.00	PREDICTED: uncharacterized protein LOC103489276 [Cucumis melo] >KAA0034548.1 unc...	[more]
KAG7013029.1	1.1e-71	77.72	hypothetical protein SDJN02_25785, partial [Cucurbita argyrosperma subsp. argyro...	[more]
KAG6573972.1	1.9e-71	77.72	hypothetical protein SDJN03_27859, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS015334 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS015334 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D9K5	2.9e-97	99.47	uncharacterized protein LOC111018621 OS=Momordica charantia OX=3673 GN=LOC111018...	[more]
A0A5A7SV83	4.2e-72	80.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BEX2	4.2e-72	80.00	uncharacterized protein LOC103489276 OS=Cucumis melo OX=3656 GN=LOC103489276 PE=...	[more]
A0A6J1HYB6	4.6e-71	76.68	uncharacterized protein LOC111467364 OS=Cucurbita maxima OX=3661 GN=LOC111467364...	[more]
A0A6J1G1T4	4.6e-71	77.20	uncharacterized protein LOC111449910 OS=Cucurbita moschata OX=3662 GN=LOC1114499...	[more]

BLAST of MS015334 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G13360.1	1.6e-36	48.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G13360.2	7.4e-29	46.99	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G13360.3	7.4e-29	45.88	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G25870.1	3.7e-28	45.90	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 91..107
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 56..110
None	No IPR available	PANTHER	PTHR34539	T6J4.11 PROTEIN	coord: 2..187
None	No IPR available	PANTHER	PTHR34539:SF19	T6J4.11 PROTEIN	coord: 2..187

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS015334.1	MS015334.1	mRNA