MS015185 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCCCGGCTTCCGAATCATCGATCAAAGCCATGCCCACTGCTCACATGAATCAACAAATTGAATGTGTAATTTGTTTGGAGGAGATGGAAGTCGGTGGCCTGATCAAACAAATGCCCTGCAACCATAAATTCCATTCCAATTGCATAGGGAAGTGGCTGGAGCTACGTGATACCTTCCCCGTTTGTAGATATCAGATGCCA CCCCCGGCTTCCGAATCATCGATCAAAGCCATGCCCACTGCTCACATGAATCAACAAATTGAATGTGTAATTTGTTTGGAGGAGATGGAAGTCGGTGGCCTGATCAAACAAATGCCCTGCAACCATAAATTCCATTCCAATTGCATAGGGAAGTGGCTGGAGCTACGTGATACCTTCCCCGTTTGTAGATATCAGATGCCA CCCCCGGCTTCCGAATCATCGATCAAAGCCATGCCCACTGCTCACATGAATCAACAAATTGAATGTGTAATTTGTTTGGAGGAGATGGAAGTCGGTGGCCTGATCAAACAAATGCCCTGCAACCATAAATTCCATTCCAATTGCATAGGGAAGTGGCTGGAGCTACGTGATACCTTCCCCGTTTGTAGATATCAGATGCCA PPASESSIKAMPTAHMNQQIECVICLEEMEVGGLIKQMPCNHKFHSNCIGKWLELRDTFPVCRYQMP Homology
BLAST of MS015185 vs. NCBI nr
Match: XP_038891708.1 (E3 ubiquitin-protein ligase MPSR1-like [Benincasa hispida]) HSP 1 Score: 112.1 bits (279), Expect = 1.9e-21 Identity = 48/67 (71.64%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of MS015185 vs. NCBI nr
Match: KAG7013138.1 (E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 111.3 bits (277), Expect = 3.2e-21 Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of MS015185 vs. NCBI nr
Match: KAG6574079.1 (E3 ubiquitin-protein ligase MPSR1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 111.3 bits (277), Expect = 3.2e-21 Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of MS015185 vs. NCBI nr
Match: XP_022945451.1 (E3 ubiquitin-protein ligase RING1-like [Cucurbita moschata]) HSP 1 Score: 111.3 bits (277), Expect = 3.2e-21 Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of MS015185 vs. NCBI nr
Match: XP_008446365.1 (PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis melo] >KAA0034425.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa] >TYK17709.1 E3 ubiquitin-protein ligase RING1-like [Cucumis melo var. makuwa]) HSP 1 Score: 110.5 bits (275), Expect = 5.5e-21 Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of MS015185 vs. ExPASy Swiss-Prot
Match: Q6AVN2 (E3 ubiquitin-protein ligase SIRP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIRP1 PE=1 SV=1) HSP 1 Score: 90.9 bits (224), Expect = 5.9e-18 Identity = 33/67 (49.25%), Postives = 50/67 (74.63%), Query Frame = 0
BLAST of MS015185 vs. ExPASy Swiss-Prot
Match: Q9LQX2 (E3 ubiquitin-protein ligase MPSR1 OS=Arabidopsis thaliana OX=3702 GN=MPSR1 PE=1 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.6e-15 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS015185 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 4.7e-15 Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 0
BLAST of MS015185 vs. ExPASy Swiss-Prot
Match: Q7T0Q3 (E3 ubiquitin-protein ligase RNF126-A OS=Xenopus laevis OX=8355 GN=rnf126-a PE=2 SV=1) HSP 1 Score: 77.0 bits (188), Expect = 8.9e-14 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of MS015185 vs. ExPASy Swiss-Prot
Match: Q6DIP3 (E3 ubiquitin-protein ligase RNF126 OS=Xenopus tropicalis OX=8364 GN=rnf126 PE=2 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 1.5e-13 Identity = 32/68 (47.06%), Postives = 43/68 (63.24%), Query Frame = 0
BLAST of MS015185 vs. ExPASy TrEMBL
Match: A0A6J1G0W4 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita moschata OX=3662 GN=LOC111449680 PE=4 SV=1) HSP 1 Score: 111.3 bits (277), Expect = 1.6e-21 Identity = 45/67 (67.16%), Postives = 58/67 (86.57%), Query Frame = 0
BLAST of MS015185 vs. ExPASy TrEMBL
Match: A0A5D3D3N1 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00370 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21 Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of MS015185 vs. ExPASy TrEMBL
Match: A0A1S3BFQ2 (E3 ubiquitin-protein ligase RING1-like OS=Cucumis melo OX=3656 GN=LOC103489128 PE=4 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 2.7e-21 Identity = 47/67 (70.15%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of MS015185 vs. ExPASy TrEMBL
Match: A0A6J1HTX2 (E3 ubiquitin-protein ligase RING1-like OS=Cucurbita maxima OX=3661 GN=LOC111467433 PE=4 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 3.5e-21 Identity = 45/67 (67.16%), Postives = 57/67 (85.07%), Query Frame = 0
BLAST of MS015185 vs. ExPASy TrEMBL
Match: A0A0A0KU18 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605210 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 1.7e-20 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 0
BLAST of MS015185 vs. TAIR 10
Match: AT1G55530.1 (RING/U-box superfamily protein ) HSP 1 Score: 85.5 bits (210), Expect = 1.8e-17 Identity = 31/67 (46.27%), Postives = 48/67 (71.64%), Query Frame = 0
BLAST of MS015185 vs. TAIR 10
Match: AT1G26800.1 (RING/U-box superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-16 Identity = 36/68 (52.94%), Postives = 47/68 (69.12%), Query Frame = 0
BLAST of MS015185 vs. TAIR 10
Match: AT5G56340.1 (RING/U-box superfamily protein ) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-16 Identity = 30/67 (44.78%), Postives = 47/67 (70.15%), Query Frame = 0
BLAST of MS015185 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein ) HSP 1 Score: 81.3 bits (199), Expect = 3.3e-16 Identity = 32/73 (43.84%), Postives = 50/73 (68.49%), Query Frame = 0
BLAST of MS015185 vs. TAIR 10
Match: AT4G26400.2 (RING/U-box superfamily protein ) HSP 1 Score: 79.3 bits (194), Expect = 1.3e-15 Identity = 29/66 (43.94%), Postives = 44/66 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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