
MS015172 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTGGATGGAAATCTCCTTGTGAAAACTTATCCTAATATTGGAATGCTGGCTTTTGGCAATAAAATAAAAGCACTGGTTTCAATTTTTGTTTATCTCAAGTTGTATTTGGTGGCATTAGAATTCTTCATACTAGAAGGTGACGGACAACCTTTTCCAAGCCCGTCTCAAAATAGGGAGTCTATAAGTTGAAGGAAAGAAGATGTTTATGCTGCCCACTGCATTTCTAATATTGCCCACC CTGGATGGAAATCTCCTTGTGAAAACTTATCCTAATATTGGAATGCTGGCTTTTGGCAATAAAATAAAAGCACTGGTTTCAATTTTTGTTTATCTCAAGTTGTATTTGGTGGCATTAGAATTCTTCATACTAGAAGGTGACGGACAACCTTTTCCAAGCCCGTCTCAAAATAGGGAGTCTATAGTTGAAGGAAAGAAGATGTTTATGCTGCCCACTGCATTTCTAATATTGCCCACC CTGGATGGAAATCTCCTTGTGAAAACTTATCCTAATATTGGAATGCTGGCTTTTGGCAATAAAATAAAAGCACTGGTTTCAATTTTTGTTTATCTCAAGTTGTATTTGGTGGCATTAGAATTCTTCATACTAGAAGGTGACGGACAACCTTTTCCAAGCCCGTCTCAAAATAGGGAGTCTATAGTTGAAGGAAAGAAGATGTTTATGCTGCCCACTGCATTTCTAATATTGCCCACC LDGNLLVKTYPNIGMLAFGNKIKALVSIFVYLKLYLVALEFFILEGDGQPFPSPSQNRESIVEGKKMFMLPTAFLILPT Homology
BLAST of MS015172 vs. NCBI nr
Match: XP_023512552.1 (amino acid transporter AVT1I-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 84.0 bits (206), Expect = 6.5e-13 Identity = 47/82 (57.32%), Postives = 60/82 (73.17%), Query Frame = 0
BLAST of MS015172 vs. NCBI nr
Match: KAG6601432.1 (Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 82.8 bits (203), Expect = 1.5e-12 Identity = 47/82 (57.32%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of MS015172 vs. NCBI nr
Match: XP_009360335.1 (PREDICTED: vacuolar amino acid transporter 1-like [Pyrus x bretschneideri] >KAB2624551.1 vacuolar amino acid transporter 1-like [Pyrus ussuriensis x Pyrus communis]) HSP 1 Score: 82.4 bits (202), Expect = 1.9e-12 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of MS015172 vs. NCBI nr
Match: KAG7032216.1 (Amino acid transporter AVT1J, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 82.4 bits (202), Expect = 1.9e-12 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of MS015172 vs. NCBI nr
Match: XP_022957374.1 (amino acid transporter AVT1J-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 82.4 bits (202), Expect = 1.9e-12 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of MS015172 vs. ExPASy Swiss-Prot
Match: F4J1Q9 (Amino acid transporter AVT1I OS=Arabidopsis thaliana OX=3702 GN=AVT1I PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.2e-09 Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of MS015172 vs. ExPASy Swiss-Prot
Match: Q9LXF8 (Amino acid transporter AVT1J OS=Arabidopsis thaliana OX=3702 GN=AVT1J PE=2 SV=1) HSP 1 Score: 62.8 bits (151), Expect = 2.0e-09 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
BLAST of MS015172 vs. ExPASy Swiss-Prot
Match: F4JE35 (Amino acid transporter AVT1B OS=Arabidopsis thaliana OX=3702 GN=AVT1B PE=3 SV=2) HSP 1 Score: 58.5 bits (140), Expect = 3.9e-08 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of MS015172 vs. ExPASy Swiss-Prot
Match: O80668 (Amino acid transporter AVT1A OS=Arabidopsis thaliana OX=3702 GN=AVT1A PE=2 SV=2) HSP 1 Score: 51.2 bits (121), Expect = 6.2e-06 Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0
BLAST of MS015172 vs. ExPASy Swiss-Prot
Match: F4IUW3 (Amino acid transporter AVT1C OS=Arabidopsis thaliana OX=3702 GN=AVT1C PE=1 SV=1) HSP 1 Score: 50.8 bits (120), Expect = 8.0e-06 Identity = 29/82 (35.37%), Postives = 46/82 (56.10%), Query Frame = 0
BLAST of MS015172 vs. ExPASy TrEMBL
Match: A0A6J1H012 (amino acid transporter AVT1J-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111458792 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.2e-13 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of MS015172 vs. ExPASy TrEMBL
Match: A0A6J1H1R5 (amino acid transporter AVT1J-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111458792 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.2e-13 Identity = 46/82 (56.10%), Postives = 59/82 (71.95%), Query Frame = 0
BLAST of MS015172 vs. ExPASy TrEMBL
Match: A0A5N5HEC7 (Vacuolar amino acid transporter 1-like OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_016211 PE=3 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 9.2e-13 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of MS015172 vs. ExPASy TrEMBL
Match: A0A498HGS6 (Aa_trans domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_007186 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.0e-12 Identity = 45/82 (54.88%), Postives = 58/82 (70.73%), Query Frame = 0
BLAST of MS015172 vs. ExPASy TrEMBL
Match: A0A2P6R2Z7 (Putative amino acid transporter, transmembrane domain-containing protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr4g0439811 PE=3 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 2.0e-12 Identity = 44/82 (53.66%), Postives = 57/82 (69.51%), Query Frame = 0
BLAST of MS015172 vs. TAIR 10
Match: AT3G28960.1 (Transmembrane amino acid transporter family protein ) HSP 1 Score: 63.5 bits (153), Expect = 8.5e-11 Identity = 35/76 (46.05%), Postives = 47/76 (61.84%), Query Frame = 0
BLAST of MS015172 vs. TAIR 10
Match: AT5G15240.1 (Transmembrane amino acid transporter family protein ) HSP 1 Score: 62.8 bits (151), Expect = 1.5e-10 Identity = 35/77 (45.45%), Postives = 52/77 (67.53%), Query Frame = 0
BLAST of MS015172 vs. TAIR 10
Match: AT3G54830.1 (Transmembrane amino acid transporter family protein ) HSP 1 Score: 58.5 bits (140), Expect = 2.7e-09 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 0
BLAST of MS015172 vs. TAIR 10
Match: AT5G15240.2 (Transmembrane amino acid transporter family protein ) HSP 1 Score: 52.0 bits (123), Expect = 2.6e-07 Identity = 25/42 (59.52%), Postives = 33/42 (78.57%), Query Frame = 0
BLAST of MS015172 vs. TAIR 10
Match: AT2G41190.1 (Transmembrane amino acid transporter family protein ) HSP 1 Score: 51.2 bits (121), Expect = 4.4e-07 Identity = 29/74 (39.19%), Postives = 43/74 (58.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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