MS015170 (gene) Bitter gourd (TR) v1

Overview
NameMS015170
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptionzinc-finger homeodomain protein 9
Locationscaffold2: 1629875 .. 1630519 (-)
RNA-Seq ExpressionMS015170
SyntenyMS015170
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CCACCCATGGAATTAGCCTCCTCTTCTTCAATCCCACAACCCATGCTCACGCTCACCTCCTACAGAGAATGCCTCAAGAACCACGCCGCCACCGTCGGCGGCCACGCCCTCGACGGCTGCGGTGAGTTTATGCCTTCACTAACCGCCACCCCCGCCGATCCCACCTCTCTAAACTGCGCTGCTTGTGGCTGCCACCGCAACTTCCACCGCCGAGAACCCGACGATCCCTGGCCAAACCTCGCCGCCCACCGCCGTTACCCTTACCACTCTCATGGGCTCTCAAGCCCGAGCCCAAACAAGGCCCAAAGCCCATCCTCGCCGGTCCCTTTACCAATTTCGCACATACCGCCGCCGCTCCACTTCTCGGCCCCCCACATGTTGCTGGCATTGAGCACCGGAGCGCCACCGGACGACCGCCGTGGCGATCAATTGACATTGAGCCCAAAAGAGAGGAAGAGAAAGAGGACCAAATTCAGCGTGGAGCAGAAGGAGAAGATGTACTTATTCTCGGAGAAAATGGGATGGAAAATTCGCAAAAGTGACGAGAGGTTAGTGGAGGAATTCTGCAATGAAATTGGGATCGGGAAGCGGGTGCTCAGAGTTTGGATGCACAATAACAAATACGTCGTCGGAGCAGCTGGGAAG

mRNA sequence

CCACCCATGGAATTAGCCTCCTCTTCTTCAATCCCACAACCCATGCTCACGCTCACCTCCTACAGAGAATGCCTCAAGAACCACGCCGCCACCGTCGGCGGCCACGCCCTCGACGGCTGCGGTGAGTTTATGCCTTCACTAACCGCCACCCCCGCCGATCCCACCTCTCTAAACTGCGCTGCTTGTGGCTGCCACCGCAACTTCCACCGCCGAGAACCCGACGATCCCTGGCCAAACCTCGCCGCCCACCGCCGTTACCCTTACCACTCTCATGGGCTCTCAAGCCCGAGCCCAAACAAGGCCCAAAGCCCATCCTCGCCGGTCCCTTTACCAATTTCGCACATACCGCCGCCGCTCCACTTCTCGGCCCCCCACATGTTGCTGGCATTGAGCACCGGAGCGCCACCGGACGACCGCCGTGGCGATCAATTGACATTGAGCCCAAAAGAGAGGAAGAGAAAGAGGACCAAATTCAGCGTGGAGCAGAAGGAGAAGATGTACTTATTCTCGGAGAAAATGGGATGGAAAATTCGCAAAAGTGACGAGAGGTTAGTGGAGGAATTCTGCAATGAAATTGGGATCGGGAAGCGGGTGCTCAGAGTTTGGATGCACAATAACAAATACGTCGTCGGAGCAGCTGGGAAG

Coding sequence (CDS)

CCACCCATGGAATTAGCCTCCTCTTCTTCAATCCCACAACCCATGCTCACGCTCACCTCCTACAGAGAATGCCTCAAGAACCACGCCGCCACCGTCGGCGGCCACGCCCTCGACGGCTGCGGTGAGTTTATGCCTTCACTAACCGCCACCCCCGCCGATCCCACCTCTCTAAACTGCGCTGCTTGTGGCTGCCACCGCAACTTCCACCGCCGAGAACCCGACGATCCCTGGCCAAACCTCGCCGCCCACCGCCGTTACCCTTACCACTCTCATGGGCTCTCAAGCCCGAGCCCAAACAAGGCCCAAAGCCCATCCTCGCCGGTCCCTTTACCAATTTCGCACATACCGCCGCCGCTCCACTTCTCGGCCCCCCACATGTTGCTGGCATTGAGCACCGGAGCGCCACCGGACGACCGCCGTGGCGATCAATTGACATTGAGCCCAAAAGAGAGGAAGAGAAAGAGGACCAAATTCAGCGTGGAGCAGAAGGAGAAGATGTACTTATTCTCGGAGAAAATGGGATGGAAAATTCGCAAAAGTGACGAGAGGTTAGTGGAGGAATTCTGCAATGAAATTGGGATCGGGAAGCGGGTGCTCAGAGTTTGGATGCACAATAACAAATACGTCGTCGGAGCAGCTGGGAAG

Protein sequence

PPMELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK
Homology
BLAST of MS015170 vs. NCBI nr
Match: XP_022151203.1 (zinc-finger homeodomain protein 9 [Momordica charantia])

HSP 1 Score: 439.9 bits (1130), Expect = 1.3e-119
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0

Query: 3   MELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAAC 62
           MELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAAC
Sbjct: 1   MELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAAC 60

Query: 63  GCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFS 122
           GCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFS
Sbjct: 61  GCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFS 120

Query: 123 APHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDE 182
           APHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDE
Sbjct: 121 APHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDE 180

Query: 183 RLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK 216
           RLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK
Sbjct: 181 RLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK 213

BLAST of MS015170 vs. NCBI nr
Match: XP_023542434.1 (zinc-finger homeodomain protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.6 bits (771), Expect = 5.4e-78
Identity = 149/195 (76.41%), Postives = 163/195 (83.59%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           YRECLKNHAATVGGHALDGCGEFMP LTATP+DPTSLNCAACGCHRNFHRREPDD W NL
Sbjct: 5   YRECLKNHAATVGGHALDGCGEFMPLLTATPSDPTSLNCAACGCHRNFHRREPDDSWQNL 64

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRR 140
             HRR  + S+ L +P   K QSPSSP+PL ISHIPPP+HFSAPHMLLALSTGA   ++R
Sbjct: 65  PTHRR--FQSYRLCTPPSPKPQSPSSPIPLQISHIPPPVHFSAPHMLLALSTGAAAQEQR 124

Query: 141 GDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLR 200
           G +   +PK+RKR RTKFS +QK+KM  FSEKMGWKI K DERLVEEFCNEIGIGKRVLR
Sbjct: 125 GGR--FNPKQRKRNRTKFSRDQKQKMRSFSEKMGWKIGKCDERLVEEFCNEIGIGKRVLR 184

Query: 201 VWMHNNKYVVGAAGK 216
           VWMHNNKY+ G   K
Sbjct: 185 VWMHNNKYMGGRTEK 195

BLAST of MS015170 vs. NCBI nr
Match: XP_022968094.1 (zinc-finger homeodomain protein 11-like [Cucurbita maxima])

HSP 1 Score: 296.2 bits (757), Expect = 2.3e-76
Identity = 147/195 (75.38%), Postives = 161/195 (82.56%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           YRECLKNHAATVGGHALDGCGEFMP LTATP+DPTSLNCAACGCHRNFHRREPDD W NL
Sbjct: 17  YRECLKNHAATVGGHALDGCGEFMPLLTATPSDPTSLNCAACGCHRNFHRREPDDSWQNL 76

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRR 140
             HRR  + S+ L +P   K QSPSSP+PL ISHIPPP+H S+PHMLLALSTGA    +R
Sbjct: 77  PTHRR--FQSYRLCTPPSPKPQSPSSPIPLQISHIPPPVHLSSPHMLLALSTGAAAQVQR 136

Query: 141 GDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLR 200
           G +   +PK+RKR RTKFS +QK+KM  FSEKMGWKI K DERLVEEFCNEIGIGKRVLR
Sbjct: 137 GGR--FNPKQRKRNRTKFSRDQKQKMRSFSEKMGWKIGKCDERLVEEFCNEIGIGKRVLR 196

Query: 201 VWMHNNKYVVGAAGK 216
           VWMHNNKY+ G   K
Sbjct: 197 VWMHNNKYMGGRTEK 207

BLAST of MS015170 vs. NCBI nr
Match: KAG6574084.1 (Zinc-finger homeodomain protein 11, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013143.1 Zinc-finger homeodomain protein 11, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 293.1 bits (749), Expect = 1.9e-75
Identity = 148/195 (75.90%), Postives = 162/195 (83.08%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           YRECLKNHAATVGGHALDGCGEFMP LTATP+DPTSLNCAACGCHRNFHRREPDD   NL
Sbjct: 5   YRECLKNHAATVGGHALDGCGEFMPLLTATPSDPTSLNCAACGCHRNFHRREPDD---NL 64

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRR 140
             HRR  + S+ L +P   K QSPSSP+PL ISHIPPP+HFSAPHMLLALSTGA   ++R
Sbjct: 65  PTHRR--FQSYRLCTPPSPKPQSPSSPIPLQISHIPPPVHFSAPHMLLALSTGAAAQEQR 124

Query: 141 GDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLR 200
           G +   +PK+RKR RTKFS +QK+KM  FSEKMGWKI K DERLVEEFCNEIGIGKRVLR
Sbjct: 125 GGR--FNPKQRKRNRTKFSRDQKQKMRSFSEKMGWKIGKCDERLVEEFCNEIGIGKRVLR 184

Query: 201 VWMHNNKYVVGAAGK 216
           VWMHNNKY+ G   K
Sbjct: 185 VWMHNNKYMGGRTEK 192

BLAST of MS015170 vs. NCBI nr
Match: XP_038892725.1 (zinc-finger homeodomain protein 10-like [Benincasa hispida])

HSP 1 Score: 291.6 bits (745), Expect = 5.6e-75
Identity = 150/213 (70.42%), Postives = 169/213 (79.34%), Query Frame = 0

Query: 5   LASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGC 64
           ++S+S++    + + SYRECLKNHAATVGGHALDGCGEFMPS T+TP DPTSLNCAACGC
Sbjct: 28  ISSNSNLNSNSMVI-SYRECLKNHAATVGGHALDGCGEFMPSATSTPTDPTSLNCAACGC 87

Query: 65  HRNFHRREPDDPWPNLAAHRRYPYHSHGLSSP--SPNKAQSPSSPVPLPISHIPPPLHFS 124
           HRNFHRREPDDPWPN    R YPY      SP  SP K+QSPSSP+PLPISHIPPP+ FS
Sbjct: 88  HRNFHRREPDDPWPN---RRYYPYRLCAPPSPRSSPIKSQSPSSPIPLPISHIPPPVQFS 147

Query: 125 APHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDE 184
            P ML+AL+TGA  ++       L  K+RKRKRTKFS EQKEKM LFSEK+GWKI KS+E
Sbjct: 148 GPPMLVALTTGAHAEEE------LRRKQRKRKRTKFSGEQKEKMQLFSEKLGWKIGKSEE 207

Query: 185 RLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK 216
           RLV+EFC EIGIGKRVLRVWMHNNKY  G  GK
Sbjct: 208 RLVQEFCKEIGIGKRVLRVWMHNNKYTGGKTGK 230

BLAST of MS015170 vs. ExPASy Swiss-Prot
Match: Q9LHF0 (Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 SV=1)

HSP 1 Score: 192.2 bits (487), Expect = 6.1e-48
Identity = 112/206 (54.37%), Postives = 135/206 (65.53%), Query Frame = 0

Query: 20  SYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDD---- 79
           +Y+ECLKNHAA +GGHALDGCGEFMPS ++TP+DPTSL CAACGCHRNFHRRE DD    
Sbjct: 51  TYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAV 110

Query: 80  PWPNL-------AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLL 139
           P P+L       AA    P+H H    P P     P S    P S  PPP+  S+ +MLL
Sbjct: 111 PPPSLLPSSTTTAAIEYQPHHRH--HPPPPLAPPLPRS----PNSSSPPPI--SSSYMLL 170

Query: 140 ALSTG---APPDD----RRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSD 199
           ALS     AP  D       + L+ +P  RKR RTKFS  QKEKM+ F++++GWKI+K D
Sbjct: 171 ALSGNNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD 230

Query: 200 ERLVEEFCNEIGIGKRVLRVWMHNNK 208
           E  V +FC EIG+ K VL+VWMHNNK
Sbjct: 231 EDEVRDFCREIGVDKGVLKVWMHNNK 248

BLAST of MS015170 vs. ExPASy Swiss-Prot
Match: Q9SEZ1 (Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZHD11 PE=1 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 1.4e-44
Identity = 103/193 (53.37%), Postives = 123/193 (63.73%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           Y+ECLKNHAA +GGHALDGCGEFMPS TAT  DP+SL CAACGCHRNFHRR+P +    L
Sbjct: 31  YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLNFL 90

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRR 140
            A    P  S    + SP  ++  SSPVP       PP      H++L+LS+G P    +
Sbjct: 91  TA----PPISSPSGTESP-PSRHVSSPVPCSYYTSAPP-----HHVILSLSSGFPGPSDQ 150

Query: 141 GDQLTLSPKE-----RKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIG 200
              +  S        RKR RTKF+ EQK KM  F+EK GWKI   DE+ V EFCNE+GI 
Sbjct: 151 DPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIE 210

Query: 201 KRVLRVWMHNNKY 209
           + VL+VWMHNNKY
Sbjct: 211 RGVLKVWMHNNKY 213

BLAST of MS015170 vs. ExPASy Swiss-Prot
Match: Q9LXG0 (Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 1.8e-44
Identity = 104/201 (51.74%), Postives = 130/201 (64.68%), Query Frame = 0

Query: 16  LTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDD 75
           + + +Y+ECLKNHAA +GGHALDGCGEFMPS +    DP SL CAACGCHRNFHRRE D 
Sbjct: 51  VAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRREEDP 110

Query: 76  PWPN--LAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTG 135
              +  + A    P++ H L  P P       SP     S  PPP+  S+ +MLLALS G
Sbjct: 111 SSLSAIVPAIEFRPHNRHQLPPPPPPHLAGIRSPDD-DDSASPPPI--SSSYMLLALSGG 170

Query: 136 APPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIG 195
                 RG   T  P  RKR RTKFS  QKEKM+ FSE++GW++ K+D+ +V+EFC EIG
Sbjct: 171 ------RGGANTAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKEFCREIG 230

Query: 196 IGKRVLRVWMHNNKYVVGAAG 215
           + K V +VWMHNNK + G +G
Sbjct: 231 VDKSVFKVWMHNNK-ISGRSG 241

BLAST of MS015170 vs. ExPASy Swiss-Prot
Match: Q6ER21 (Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ZHD9 PE=3 SV=2)

HSP 1 Score: 173.7 bits (439), Expect = 2.2e-42
Identity = 103/226 (45.58%), Postives = 129/226 (57.08%), Query Frame = 0

Query: 19  TSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDD--- 78
           T YRECLKNHAA++GGHALDGCGEFMPS  A PADPTSL CAACGCHRNFHRR P+    
Sbjct: 39  TVYRECLKNHAASLGGHALDGCGEFMPSPAANPADPTSLRCAACGCHRNFHRRLPEGSPP 98

Query: 79  --------PWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPL----PISHIPPPL---- 138
                   P P +  HR        L     +++ S S          +S  PPPL    
Sbjct: 99  PPPPPALLPAPPMPPHRGEETPEVRLPGVDGDESDSDSDGSEYDDERSVSPPPPPLAAAV 158

Query: 139 -----HFSAPHMLLALSTGA-----PPDDRRGDQLTLSP-------KERKRKRTKFSVEQ 198
                + SAPHMLL+L +       PP           P         RKR RTKF+ EQ
Sbjct: 159 AHQVYYPSAPHMLLSLGSSGQAQRLPPQVMSPAAAAAPPPGGGGGGMPRKRFRTKFTAEQ 218

Query: 199 KEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLRVWMHNNKY 209
           K++M   SE++GW+++K DE +V+E+C +IG+GK V +VWMHNNK+
Sbjct: 219 KQRMQELSERLGWRLQKRDEAIVDEWCRDIGVGKGVFKVWMHNNKH 264

BLAST of MS015170 vs. ExPASy Swiss-Prot
Match: Q9FIW9 (Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.9e-42
Identity = 105/213 (49.30%), Postives = 129/213 (60.56%), Query Frame = 0

Query: 18  LTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDD-- 77
           L +Y+ECLKNHAA +GGHALDGCGEFMPS ++  +DPTSL CAACGCHRNFHRR+PD+  
Sbjct: 53  LFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNN 112

Query: 78  -----PWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLAL 137
                P P   A    P+H H    P P     P  P   P S  PPP+  S+ +MLL+L
Sbjct: 113 DSSQIPPPPSTAVEYQPHHRH---HPPP---PPPPPPPRSPNSASPPPI--SSSYMLLSL 172

Query: 138 S----------------TGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMG 197
           S                  A  +     Q TL    RKR RTKFS  QKEKM+ F+E++G
Sbjct: 173 SGTNNNNNNLASFSDLNFSAGNNHHHHHQHTLH-GSRKRFRTKFSQFQKEKMHEFAERVG 232

Query: 198 WKIRKSDERLVEEFCNEIGIGKRVLRVWMHNNK 208
           WK++K DE  V +FC +IG+ K VL+VWMHNNK
Sbjct: 233 WKMQKRDEDDVRDFCRQIGVDKSVLKVWMHNNK 256

BLAST of MS015170 vs. ExPASy TrEMBL
Match: A0A6J1DBJ8 (zinc-finger homeodomain protein 9 OS=Momordica charantia OX=3673 GN=LOC111019182 PE=4 SV=1)

HSP 1 Score: 439.9 bits (1130), Expect = 6.2e-120
Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0

Query: 3   MELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAAC 62
           MELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAAC
Sbjct: 1   MELASSSSIPQPMLTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAAC 60

Query: 63  GCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFS 122
           GCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFS
Sbjct: 61  GCHRNFHRREPDDPWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFS 120

Query: 123 APHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDE 182
           APHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDE
Sbjct: 121 APHMLLALSTGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDE 180

Query: 183 RLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK 216
           RLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK
Sbjct: 181 RLVEEFCNEIGIGKRVLRVWMHNNKYVVGAAGK 213

BLAST of MS015170 vs. ExPASy TrEMBL
Match: A0A6J1HYM2 (zinc-finger homeodomain protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111467430 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.1e-76
Identity = 147/195 (75.38%), Postives = 161/195 (82.56%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           YRECLKNHAATVGGHALDGCGEFMP LTATP+DPTSLNCAACGCHRNFHRREPDD W NL
Sbjct: 17  YRECLKNHAATVGGHALDGCGEFMPLLTATPSDPTSLNCAACGCHRNFHRREPDDSWQNL 76

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRR 140
             HRR  + S+ L +P   K QSPSSP+PL ISHIPPP+H S+PHMLLALSTGA    +R
Sbjct: 77  PTHRR--FQSYRLCTPPSPKPQSPSSPIPLQISHIPPPVHLSSPHMLLALSTGAAAQVQR 136

Query: 141 GDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLR 200
           G +   +PK+RKR RTKFS +QK+KM  FSEKMGWKI K DERLVEEFCNEIGIGKRVLR
Sbjct: 137 GGR--FNPKQRKRNRTKFSRDQKQKMRSFSEKMGWKIGKCDERLVEEFCNEIGIGKRVLR 196

Query: 201 VWMHNNKYVVGAAGK 216
           VWMHNNKY+ G   K
Sbjct: 197 VWMHNNKYMGGRTEK 207

BLAST of MS015170 vs. ExPASy TrEMBL
Match: A0A6J1G1A3 (zinc-finger homeodomain protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC111449751 PE=4 SV=1)

HSP 1 Score: 290.4 bits (742), Expect = 6.1e-75
Identity = 147/195 (75.38%), Postives = 161/195 (82.56%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           YRECLKNHAATVGGHALDGCGEFMP LTATP+DPTSLNCAACGCHRNFHRREPDD   NL
Sbjct: 5   YRECLKNHAATVGGHALDGCGEFMPLLTATPSDPTSLNCAACGCHRNFHRREPDD---NL 64

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRR 140
             HRR  + S+ L +P   K QSPSSP+PL ISHIPPP+HFSAPHMLLALST A   ++R
Sbjct: 65  PTHRR--FQSYRLCTPPSPKPQSPSSPIPLQISHIPPPVHFSAPHMLLALSTDAAAQEQR 124

Query: 141 GDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIGKRVLR 200
           G +   +PK+RKR RTKFS +QK+KM  FSEKMGWKI K DERLVEEFCNEIGIGKRVLR
Sbjct: 125 GGR--FNPKQRKRNRTKFSRDQKQKMRSFSEKMGWKIGKCDERLVEEFCNEIGIGKRVLR 184

Query: 201 VWMHNNKYVVGAAGK 216
           VWMHNNKY+ G   K
Sbjct: 185 VWMHNNKYMGGRTEK 192

BLAST of MS015170 vs. ExPASy TrEMBL
Match: A0A0A0KSP2 (ZF-HD homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605080 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 6.7e-74
Identity = 147/200 (73.50%), Postives = 160/200 (80.00%), Query Frame = 0

Query: 18  LTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPW 77
           L SY+ECLKNHAA VGGHALDGCGEFMPS+T+TP DPTSLNCAACGCHRNFHRRE DDPW
Sbjct: 2   LISYKECLKNHAAAVGGHALDGCGEFMPSITSTPTDPTSLNCAACGCHRNFHRRESDDPW 61

Query: 78  PNLAAHRRYPYHSHGLSSP--SPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAP 137
           PN    R YPY      SP  S  K+QSPSSP+PLPISHIPPP+ FS  HML+ALS+GA 
Sbjct: 62  PN---RRYYPYRLCAPPSPRLSRIKSQSPSSPIPLPISHIPPPVQFSGAHMLMALSSGA- 121

Query: 138 PDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIG 197
                G++  L  KERKRKRTKFS EQKEKM LFSEKMGW+I KS+ERLVEEFC EIGIG
Sbjct: 122 -----GEEDELRRKERKRKRTKFSGEQKEKMQLFSEKMGWRIGKSEERLVEEFCREIGIG 181

Query: 198 KRVLRVWMHNNKYVVGAAGK 216
           KRVLRVWMHNNKY+ G   K
Sbjct: 182 KRVLRVWMHNNKYMGGKTEK 192

BLAST of MS015170 vs. ExPASy TrEMBL
Match: A0A5A7SX18 (Zinc-finger homeodomain protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1932G00450 PE=4 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 4.3e-73
Identity = 145/200 (72.50%), Postives = 160/200 (80.00%), Query Frame = 0

Query: 18  LTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPW 77
           L SY+ECLKNHAA VGGHALDGCGEFMPS+T+TP DPTSLNCAACGCHRNFHRRE DD W
Sbjct: 2   LISYKECLKNHAAAVGGHALDGCGEFMPSITSTPTDPTSLNCAACGCHRNFHRRESDDSW 61

Query: 78  PNLAAHRRYPYHSHGLSSP--SPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAP 137
           PN    R YPY      SP  S  K+QSPSSP+PLPISHIPPP+ FS PHML+ALST A 
Sbjct: 62  PN---RRYYPYRLCAPPSPRSSRIKSQSPSSPIPLPISHIPPPVQFSGPHMLMALSTEAA 121

Query: 138 PDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIG 197
            ++   ++  L  K+RKRKRTKFS EQKEKM LFSEKMGW+I KS+ERLVEEFC EIGIG
Sbjct: 122 AEEEEEEE-ELRRKQRKRKRTKFSGEQKEKMQLFSEKMGWRIGKSEERLVEEFCKEIGIG 181

Query: 198 KRVLRVWMHNNKYVVGAAGK 216
           KRVLRVWMHNNKY+ G   K
Sbjct: 182 KRVLRVWMHNNKYMGGKTEK 197

BLAST of MS015170 vs. TAIR 10
Match: AT3G28920.1 (homeobox protein 34 )

HSP 1 Score: 192.2 bits (487), Expect = 4.3e-49
Identity = 112/206 (54.37%), Postives = 135/206 (65.53%), Query Frame = 0

Query: 20  SYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDD---- 79
           +Y+ECLKNHAA +GGHALDGCGEFMPS ++TP+DPTSL CAACGCHRNFHRRE DD    
Sbjct: 51  TYKECLKNHAAAIGGHALDGCGEFMPSPSSTPSDPTSLKCAACGCHRNFHRRETDDSSAV 110

Query: 80  PWPNL-------AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLL 139
           P P+L       AA    P+H H    P P     P S    P S  PPP+  S+ +MLL
Sbjct: 111 PPPSLLPSSTTTAAIEYQPHHRH--HPPPPLAPPLPRS----PNSSSPPPI--SSSYMLL 170

Query: 140 ALSTG---APPDD----RRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSD 199
           ALS     AP  D       + L+ +P  RKR RTKFS  QKEKM+ F++++GWKI+K D
Sbjct: 171 ALSGNNKTAPFSDLNFAAAANHLSATPGSRKRFRTKFSSNQKEKMHEFADRIGWKIQKRD 230

Query: 200 ERLVEEFCNEIGIGKRVLRVWMHNNK 208
           E  V +FC EIG+ K VL+VWMHNNK
Sbjct: 231 EDEVRDFCREIGVDKGVLKVWMHNNK 248

BLAST of MS015170 vs. TAIR 10
Match: AT1G69600.1 (zinc finger homeodomain 1 )

HSP 1 Score: 181.0 bits (458), Expect = 1.0e-45
Identity = 103/193 (53.37%), Postives = 123/193 (63.73%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           Y+ECLKNHAA +GGHALDGCGEFMPS TAT  DP+SL CAACGCHRNFHRR+P +    L
Sbjct: 31  YKECLKNHAANLGGHALDGCGEFMPSPTATSTDPSSLRCAACGCHRNFHRRDPSENLNFL 90

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTGAPPDDRR 140
            A    P  S    + SP  ++  SSPVP       PP      H++L+LS+G P    +
Sbjct: 91  TA----PPISSPSGTESP-PSRHVSSPVPCSYYTSAPP-----HHVILSLSSGFPGPSDQ 150

Query: 141 GDQLTLSPKE-----RKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIGIG 200
              +  S        RKR RTKF+ EQK KM  F+EK GWKI   DE+ V EFCNE+GI 
Sbjct: 151 DPTVVRSENSSRGAMRKRTRTKFTPEQKIKMRAFAEKAGWKINGCDEKSVREFCNEVGIE 210

Query: 201 KRVLRVWMHNNKY 209
           + VL+VWMHNNKY
Sbjct: 211 RGVLKVWMHNNKY 213

BLAST of MS015170 vs. TAIR 10
Match: AT5G15210.1 (homeobox protein 30 )

HSP 1 Score: 180.6 bits (457), Expect = 1.3e-45
Identity = 104/201 (51.74%), Postives = 130/201 (64.68%), Query Frame = 0

Query: 16  LTLTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDD 75
           + + +Y+ECLKNHAA +GGHALDGCGEFMPS +    DP SL CAACGCHRNFHRRE D 
Sbjct: 51  VAVATYKECLKNHAAGIGGHALDGCGEFMPSPSFNSNDPASLTCAACGCHRNFHRREEDP 110

Query: 76  PWPN--LAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTG 135
              +  + A    P++ H L  P P       SP     S  PPP+  S+ +MLLALS G
Sbjct: 111 SSLSAIVPAIEFRPHNRHQLPPPPPPHLAGIRSPDD-DDSASPPPI--SSSYMLLALSGG 170

Query: 136 APPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEIG 195
                 RG   T  P  RKR RTKFS  QKEKM+ FSE++GW++ K+D+ +V+EFC EIG
Sbjct: 171 ------RGGANTAVPMSRKRFRTKFSQYQKEKMFEFSERVGWRMPKADDVVVKEFCREIG 230

Query: 196 IGKRVLRVWMHNNKYVVGAAG 215
           + K V +VWMHNNK + G +G
Sbjct: 231 VDKSVFKVWMHNNK-ISGRSG 241

BLAST of MS015170 vs. TAIR 10
Match: AT5G39760.1 (homeobox protein 23 )

HSP 1 Score: 173.3 bits (438), Expect = 2.1e-43
Identity = 105/213 (49.30%), Postives = 129/213 (60.56%), Query Frame = 0

Query: 18  LTSYRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDD-- 77
           L +Y+ECLKNHAA +GGHALDGCGEFMPS ++  +DPTSL CAACGCHRNFHRR+PD+  
Sbjct: 53  LFTYKECLKNHAAALGGHALDGCGEFMPSPSSISSDPTSLKCAACGCHRNFHRRDPDNNN 112

Query: 78  -----PWPNLAAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLAL 137
                P P   A    P+H H    P P     P  P   P S  PPP+  S+ +MLL+L
Sbjct: 113 DSSQIPPPPSTAVEYQPHHRH---HPPP---PPPPPPPRSPNSASPPPI--SSSYMLLSL 172

Query: 138 S----------------TGAPPDDRRGDQLTLSPKERKRKRTKFSVEQKEKMYLFSEKMG 197
           S                  A  +     Q TL    RKR RTKFS  QKEKM+ F+E++G
Sbjct: 173 SGTNNNNNNLASFSDLNFSAGNNHHHHHQHTLH-GSRKRFRTKFSQFQKEKMHEFAERVG 232

Query: 198 WKIRKSDERLVEEFCNEIGIGKRVLRVWMHNNK 208
           WK++K DE  V +FC +IG+ K VL+VWMHNNK
Sbjct: 233 WKMQKRDEDDVRDFCRQIGVDKSVLKVWMHNNK 256

BLAST of MS015170 vs. TAIR 10
Match: AT5G60480.1 (homeobox protein 26 )

HSP 1 Score: 163.7 bits (413), Expect = 1.6e-40
Identity = 94/196 (47.96%), Postives = 116/196 (59.18%), Query Frame = 0

Query: 21  YRECLKNHAATVGGHALDGCGEFMPSLTATPADPTSLNCAACGCHRNFHRREPDDPWPNL 80
           Y ECLKNHA ++GGHALDGCGEF P  T    DP SL C ACGCHRNFHRR P D     
Sbjct: 5   YNECLKNHAVSLGGHALDGCGEFTPKSTTILTDPPSLRCDACGCHRNFHRRSPSD---GF 64

Query: 81  AAHRRYPYHSHGLSSPSPNKAQSPSSPVPLPISHIPPPLHFSAPHMLLALSTG--APPDD 140
           + HR         S PSP + Q P +PV               P++LL+LS+G   P D 
Sbjct: 65  SQHR---------SPPSPLQLQ-PLAPV---------------PNLLLSLSSGFFGPSDQ 124

Query: 141 RRGDQLTLSPKER------KRKRTKFSVEQKEKMYLFSEKMGWKIRKSDERLVEEFCNEI 200
              ++ T+    R      K KRTKF+ EQK KM  F+E+ GWKI   DE+ V EFC+E+
Sbjct: 125 EVKNKFTVERDVRKTAMIKKHKRTKFTAEQKVKMRGFAERAGWKINGWDEKWVREFCSEV 172

Query: 201 GIGKRVLRVWMHNNKY 209
           GI ++VL+VW+HNNKY
Sbjct: 185 GIERKVLKVWIHNNKY 172

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022151203.11.3e-119100.00zinc-finger homeodomain protein 9 [Momordica charantia][more]
XP_023542434.15.4e-7876.41zinc-finger homeodomain protein 11-like [Cucurbita pepo subsp. pepo][more]
XP_022968094.12.3e-7675.38zinc-finger homeodomain protein 11-like [Cucurbita maxima][more]
KAG6574084.11.9e-7575.90Zinc-finger homeodomain protein 11, partial [Cucurbita argyrosperma subsp. soror... [more]
XP_038892725.15.6e-7570.42zinc-finger homeodomain protein 10-like [Benincasa hispida][more]
Match NameE-valueIdentityDescription
Q9LHF06.1e-4854.37Zinc-finger homeodomain protein 9 OS=Arabidopsis thaliana OX=3702 GN=ZHD9 PE=1 S... [more]
Q9SEZ11.4e-4453.37Zinc-finger homeodomain protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZHD11 PE=1... [more]
Q9LXG01.8e-4451.74Zinc-finger homeodomain protein 8 OS=Arabidopsis thaliana OX=3702 GN=ZHD8 PE=1 S... [more]
Q6ER212.2e-4245.58Zinc-finger homeodomain protein 9 OS=Oryza sativa subsp. japonica OX=39947 GN=ZH... [more]
Q9FIW92.9e-4249.30Zinc-finger homeodomain protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZHD10 PE=1... [more]
Match NameE-valueIdentityDescription
A0A6J1DBJ86.2e-120100.00zinc-finger homeodomain protein 9 OS=Momordica charantia OX=3673 GN=LOC111019182... [more]
A0A6J1HYM21.1e-7675.38zinc-finger homeodomain protein 11-like OS=Cucurbita maxima OX=3661 GN=LOC111467... [more]
A0A6J1G1A36.1e-7575.38zinc-finger homeodomain protein 11-like OS=Cucurbita moschata OX=3662 GN=LOC1114... [more]
A0A0A0KSP26.7e-7473.50ZF-HD homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G605... [more]
A0A5A7SX184.3e-7372.50Zinc-finger homeodomain protein 9 OS=Cucumis melo var. makuwa OX=1194695 GN=E567... [more]
Match NameE-valueIdentityDescription
AT3G28920.14.3e-4954.37homeobox protein 34 [more]
AT1G69600.11.0e-4553.37zinc finger homeodomain 1 [more]
AT5G15210.11.3e-4551.74homeobox protein 30 [more]
AT5G39760.12.1e-4349.30homeobox protein 23 [more]
AT5G60480.11.6e-4047.96homeobox protein 26 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006455Homeodomain, ZF-HD classTIGRFAMTIGR01565TIGR01565coord: 151..208
e-value: 3.6E-24
score: 82.5
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainTIGRFAMTIGR01566TIGR01566coord: 21..72
e-value: 1.8E-30
score: 103.1
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPFAMPF04770ZF-HD_dimercoord: 20..73
e-value: 2.3E-28
score: 98.3
IPR006456ZF-HD homeobox protein, Cys/His-rich dimerisation domainPROSITEPS51523ZF_HD_DIMERcoord: 21..72
score: 26.469364
NoneNo IPR availableGENE3D1.10.10.60coord: 138..212
e-value: 5.3E-28
score: 98.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..115
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..157
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..157
NoneNo IPR availablePANTHERPTHR31948:SF102HOMEOBOX DOMAIN, ZF-HD CLASS PROTEINcoord: 15..209
NoneNo IPR availablePANTHERPTHR31948ZINC-FINGER HOMEODOMAIN PROTEIN 2coord: 15..209
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 141..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS015170.1MS015170.1mRNA