MS014657 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTACCCTAAGAGTTGTGTCACTTGGAATTCTTGTGCTGGTGGGTTTGGGCTTAGCTTCGGCTGCCCGAACCCTCCTGGATTATGATCGTCGCTACGGTTATGGTCGTCCCAGCCCACGAGTAGGGTATGATCCCGACCATGGTGATGAATCGTATGATAACATATATGGCGGTCGAGGAAGTGGTTCCAGATATGGGGGTCGAGGAGATCATGGCAGCGGTGGATATGGAGGTGAAGTGGAGCGTGATGTTGGTTATGGTAGAGGATATGGAAGTGGAGGCAGTGAAGGATATGGTCCAGGAGGAGATCGTGGTGGCTATGGCTATGGTAGCAGTGGCAGTGGAATTGGGTCTAATAATGGTGGAGAAGGAGGATATGGTAATAGTGGCAAAGGAAGTGGAGATGAGAGTGGATATGATGGGGGATAT ATGGCTACCCTAAGAGTTGTGTCACTTGGAATTCTTGTGCTGGTGGGTTTGGGCTTAGCTTCGGCTGCCCGAACCCTCCTGGATTATGATCGTCGCTACGGTTATGGTCGTCCCAGCCCACGAGTAGGGTATGATCCCGACCATGGTGATGAATCGTATGATAACATATATGGCGGTCGAGGAAGTGGTTCCAGATATGGGGGTCGAGGAGATCATGGCAGCGGTGGATATGGAGGTGAAGTGGAGCGTGATGTTGGTTATGGTAGAGGATATGGAAGTGGAGGCAGTGAAGGATATGGTCCAGGAGGAGATCGTGGTGGCTATGGCTATGGTAGCAGTGGCAGTGGAATTGGGTCTAATAATGGTGGAGAAGGAGGATATGGTAATAGTGGCAAAGGAAGTGGAGATGAGAGTGGATATGATGGGGGATAT ATGGCTACCCTAAGAGTTGTGTCACTTGGAATTCTTGTGCTGGTGGGTTTGGGCTTAGCTTCGGCTGCCCGAACCCTCCTGGATTATGATCGTCGCTACGGTTATGGTCGTCCCAGCCCACGAGTAGGGTATGATCCCGACCATGGTGATGAATCGTATGATAACATATATGGCGGTCGAGGAAGTGGTTCCAGATATGGGGGTCGAGGAGATCATGGCAGCGGTGGATATGGAGGTGAAGTGGAGCGTGATGTTGGTTATGGTAGAGGATATGGAAGTGGAGGCAGTGAAGGATATGGTCCAGGAGGAGATCGTGGTGGCTATGGCTATGGTAGCAGTGGCAGTGGAATTGGGTCTAATAATGGTGGAGAAGGAGGATATGGTAATAGTGGCAAAGGAAGTGGAGATGAGAGTGGATATGATGGGGGATAT MATLRVVSLGILVLVGLGLASAARTLLDYDRRYGYGRPSPRVGYDPDHGDESYDNIYGGRGSGSRYGGRGDHGSGGYGGEVERDVGYGRGYGSGGSEGYGPGGDRGGYGYGSSGSGIGSNNGGEGGYGNSGKGSGDESGYDGGY Homology
BLAST of MS014657 vs. NCBI nr
Match: XP_008448676.1 (PREDICTED: glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis melo] >XP_008448677.1 PREDICTED: glycine-rich cell wall structural protein 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-15 Identity = 88/163 (53.99%), Postives = 99/163 (60.74%), Query Frame = 0
BLAST of MS014657 vs. NCBI nr
Match: KAA0053038.1 (glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis melo var. makuwa] >TYK11493.1 glycine-rich cell wall structural protein 2-like isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-15 Identity = 88/163 (53.99%), Postives = 99/163 (60.74%), Query Frame = 0
BLAST of MS014657 vs. NCBI nr
Match: XP_008449165.1 (PREDICTED: glycine-rich cell wall structural protein 1.8-like [Cucumis melo] >KAA0053039.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa] >TYK11494.1 glycine-rich cell wall structural protein 1.8-like [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 2.6e-15 Identity = 87/156 (55.77%), Postives = 94/156 (60.26%), Query Frame = 0
BLAST of MS014657 vs. NCBI nr
Match: KAG6577708.1 (hypothetical protein SDJN03_25282, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 91.7 bits (226), Expect = 5.7e-15 Identity = 90/181 (49.72%), Postives = 99/181 (54.70%), Query Frame = 0
BLAST of MS014657 vs. NCBI nr
Match: XP_038903414.1 (glycine-rich cell wall structural protein 1.8-like [Benincasa hispida]) HSP 1 Score: 91.7 bits (226), Expect = 5.7e-15 Identity = 87/172 (50.58%), Postives = 96/172 (55.81%), Query Frame = 0
BLAST of MS014657 vs. ExPASy Swiss-Prot
Match: P0C5C7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=GRP0.9 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04 Identity = 69/146 (47.26%), Postives = 80/146 (54.79%), Query Frame = 0
BLAST of MS014657 vs. ExPASy Swiss-Prot
Match: A3C5A7 (Glycine-rich cell wall structural protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=GRP0.9 PE=2 SV=1) HSP 1 Score: 46.2 bits (108), Expect = 3.6e-04 Identity = 69/146 (47.26%), Postives = 80/146 (54.79%), Query Frame = 0
BLAST of MS014657 vs. ExPASy TrEMBL
Match: A0A1S3BL53 (glycine-rich cell wall structural protein 2-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490776 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 88/163 (53.99%), Postives = 99/163 (60.74%), Query Frame = 0
BLAST of MS014657 vs. ExPASy TrEMBL
Match: A0A5A7UHU2 (Glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001580 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 87/156 (55.77%), Postives = 94/156 (60.26%), Query Frame = 0
BLAST of MS014657 vs. ExPASy TrEMBL
Match: A0A5A7UCW7 (Glycine-rich cell wall structural protein 2-like isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold139G001570 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 88/163 (53.99%), Postives = 99/163 (60.74%), Query Frame = 0
BLAST of MS014657 vs. ExPASy TrEMBL
Match: A0A1S3BMC4 (glycine-rich cell wall structural protein 1.8-like OS=Cucumis melo OX=3656 GN=LOC103491115 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 1.2e-15 Identity = 87/156 (55.77%), Postives = 94/156 (60.26%), Query Frame = 0
BLAST of MS014657 vs. ExPASy TrEMBL
Match: A0A6J1E6E4 (glycine-rich protein DOT1-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111431202 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 1.1e-14 Identity = 92/213 (43.19%), Postives = 105/213 (49.30%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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