MS014631 (gene) Bitter gourd (TR) v1

Overview


Name	MS014631
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Dynein light chain
Location	scaffold1096: 187186 .. 189154 (+)
RNA-Seq Expression	MS014631
Synteny	MS014631

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATCAAGACGCCAAGAGAACCAATCCTGCATCTCTAATGGTGAAACCCGAATCTGAGGATCGCAAACCCTCCTCCGCGCCACCCCTCGCCCGGAAAGTCGTCATCAAGAGCGCCGATATGTTCGGGGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCCGTTAGTGCTTCTCTCTCTCCCTCTTTTCAATCTCTACCGAATCAATCAATCCACAGGTAATTTTGGTGGACAATCTGTTTCTGTTTCTGTTTCGTTTCTTGTTGTTTAGGCTTTTGAGAAGTATGCCGTCGAGAAGGACGTCGCGGAGCAGATAAAGAGGGAGTTCGATAAGAGGCATGGCCCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTAACCCATTTCACTCTCTTTGTGAATCTCTAGCTTCCTTTTTGATTTTCGCTCAATCTCAATAAATTTCTGTTGCTTTGGTCTCTTACAAAAGATTCTGCTACTTCAATATATGGAAATGGAGATCTGGATTTGATTGTTTTTGTTTTCTGGGTTCTTTTTGGGGATTCTGACACCATTAGCTTGACTCTTCTTTCGGGCTCCGGCATTTAGCAGGAGCGAGATTTGTCTGCATAGGCAGTTTTAGCCCAGATGTGTTTGTACATGAAATTTATGTTCTTGCATCAGTAGGTAACTGCCTCTATTGGAGAATTTTGACTCCCTTTGGTCCACCGCCCTACTCTATTTTGAATCTGCTAGCTAATTCTCAGCTACATCAATCAGATCAGCGTAAGGGAATTCAAGTGGATGGATTGTTTGGCTATGTTGACAACCGGGGGGTGGGGGCTCCCCCCAGAGTTTGATGATGAAACCAACTAACATAGTGAGATGGGATTGTTTGGGACTATGCAAGTTGAATATTGGGCTGAGTGTTCCATTGGGGCAAAAGACCAATTGGTTTAAAATACTCATTTTGCGTTCAAATTTTCCCATTTTCAGTTTCTTTCAAAGAAAAATATAGAATATTGGGCTGAAGCGTGTTTGTGGAATTTGATTTAGTTTTGTTAGTAATAATTCAAGCGAAGAATTATTGCTTTTATTTTCATTTTGCAATGTGGTTAGGCACCTAGCCATCTAGCTGACTTCATCGTGATATTGTCTGTTTTGCAATGTTTGTTGAACATGACTTAATCTCAAATCTGTATGATTCTGTCCGCACAGTGAATAGTAACAATAAAAATATCCTGTTTCATGTTAAATTCAAGCATCAAATGTTGGTTCTTGGTAAATATTTGCTTGAAGAGATTCGGGGAGATGATCTGCAACTTTTTTTTCTCTTTTGCTTCTTTTCTTCGTGCTAGTAGTGAAATAAACGATTCTTATCAGCAAATAATAAAAGGTATGGATCTCACAGACAGAGAGCTCTGCTAATTTAAAACTTTCAAAGTAAAAATGAGTTAAGTTTAAGTTAGAATGTATGTGGGTAGTGTGTGAACGAGTAATCATTGGATTAGCGTGGTTTCCACTACCTCATAGTGCCAACATTTCCCCTTTATATGGCCATCCATCCCAAACCTTGAAGGAACCCTGTGGTGGTAGTGATCCATTTAGTCTTTTCATTTTTTTCTGAGTGGATTTAATTGCTCTTAAAGCATTTGTAGCCATAAAAACTACAAGCCCTTGTAGTTATTGTGTTAGTAGATGAAAAGGACCATTAGTTCTAGTTGCCGGCTCCAGACCAATAGTTTGGAAAATTCCAAAAAAAACACTCCCTTATCTCTAAGAATGTTGCAGTGCATTGTCCTGTTCACGATTATTGAGCTCTATTCAGGGTGCTTTTTGTGCTGGTTCTTTTTCCAGAACTAAATGAATTTCACAGATGATTCGATTTTCTGGTTTCTGTTTCAGGTTCCTATGTGACACACGAGACAAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTCAAATCTGGT

mRNA sequence

ATGAATCAAGACGCCAAGAGAACCAATCCTGCATCTCTAATGGTGAAACCCGAATCTGAGGATCGCAAACCCTCCTCCGCGCCACCCCTCGCCCGGAAAGTCGTCATCAAGAGCGCCGATATGTTCGGGGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCCGCTTTTGAGAAGTATGCCGTCGAGAAGGACGTCGCGGAGCAGATAAAGAGGGAGTTCGATAAGAGGCATGGCCCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTTCCTATGTGACACACGAGACAAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTCAAATCTGGT

Coding sequence (CDS)

ATGAATCAAGACGCCAAGAGAACCAATCCTGCATCTCTAATGGTGAAACCCGAATCTGAGGATCGCAAACCCTCCTCCGCGCCACCCCTCGCCCGGAAAGTCGTCATCAAGAGCGCCGATATGTTCGGGGACATGCAGAAGGAGGCTGTTGACATTGCCATAGCCGCTTTTGAGAAGTATGCCGTCGAGAAGGACGTCGCGGAGCAGATAAAGAGGGAGTTCGATAAGAGGCATGGCCCCACCTGGCATTGCATCGTCGGTCGTAATTTTGGTTCCTATGTGACACACGAGACAAACCATTTTGTTTACTTCTACCTGGATCAGAAAGCAGTTTTACTTTTCAAATCTGGT

Protein sequence

MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG

Homology

[Close]

BLAST of MS014631 vs. NCBI nr
Match: XP_022138126.1 (dynein light chain 1, cytoplasmic [Momordica charantia])

HSP 1 Score: 235.7 bits (600), Expect = 2.0e-58
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY
Sbjct: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]

BLAST of MS014631 vs. NCBI nr
Match: XP_022945423.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata])

HSP 1 Score: 215.7 bits (548), Expect = 2.1e-52
Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MN D+KR+NP+ LMVKPESEDRKPSSA P+ +K+VIKSADMFGDMQKEAVDIAIAAFEK+
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           +VEKDVAEQIK+EFDKRHGPTWHC++GRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]

BLAST of MS014631 vs. NCBI nr
Match: XP_022973755.1 (dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 212.6 bits (540), Expect = 1.8e-51
Identity = 103/117 (88.03%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MN D+KR+NP SLMVKPESEDRKPSSA P+ +K+VIKSADMFGDMQKEAVDIAIAAFEK+
Sbjct: 1   MNHDSKRSNP-SLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           +VEKDVAEQIK+EFDKRHGPTWHC++GRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 116

[Close]

BLAST of MS014631 vs. NCBI nr
Match: XP_038904701.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 203.4 bits (516), Expect = 1.1e-48
Identity = 95/117 (81.20%), Postives = 110/117 (94.02%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MNQ++ R+NP  LMVKPES+DRKPSSA  +++K+VIKSADMF DMQKEA+DIAIAAFEK+
Sbjct: 1   MNQESHRSNPPPLMVKPESDDRKPSSAAAVSKKIVIKSADMFSDMQKEAIDIAIAAFEKH 60

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           +VEKD+AEQIK++FDK HGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKA+LLFKSG
Sbjct: 61  SVEKDIAEQIKKQFDKNHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAILLFKSG 117

[Close]

BLAST of MS014631 vs. NCBI nr
Match: XP_022979977.1 (dynein 8 kDa light chain, flagellar outer arm-like [Cucurbita maxima])

HSP 1 Score: 203.0 bits (515), Expect = 1.4e-48
Identity = 99/117 (84.62%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MNQ++KR+NP  LMVKPESEDRK SS    A+K+VIKSADMFG MQKEAVDIAIAAFEK+
Sbjct: 29  MNQESKRSNPNPLMVKPESEDRKASSVAAAAKKIVIKSADMFGHMQKEAVDIAIAAFEKH 88

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           +VEKDVAEQIK+EFD+RHGPTWHCIVGRNFGSYVTHE+NHFVYFYLDQKAVLLFKSG
Sbjct: 89  SVEKDVAEQIKKEFDQRHGPTWHCIVGRNFGSYVTHESNHFVYFYLDQKAVLLFKSG 145

[Close]

BLAST of MS014631 vs. ExPASy Swiss-Prot
Match: Q22799 (Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-31
Identity = 61/86 (70.93%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 32  RKVVIKSADMFGDMQKEAVDIAIAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFG 91
           RK VIK+ADM  DMQ++A+D A  A EKY +EKD+A  IK+EFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSDDMQQDAIDCATQALEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MS014631 vs. ExPASy Swiss-Prot
Match: Q3MHR3 (Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-31
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 32  RKVVIKSADMFGDMQKEAVDIAIAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFG 91
           RK VIK+ADM  DMQ++AVD A  A EKY +EKD+A  IK+EFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MS014631 vs. ExPASy Swiss-Prot
Match: Q96FJ2 (Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-31
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 32  RKVVIKSADMFGDMQKEAVDIAIAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFG 91
           RK VIK+ADM  DMQ++AVD A  A EKY +EKD+A  IK+EFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MS014631 vs. ExPASy Swiss-Prot
Match: Q9D0M5 (Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-31
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 32  RKVVIKSADMFGDMQKEAVDIAIAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFG 91
           RK VIK+ADM  DMQ++AVD A  A EKY +EKD+A  IK+EFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MS014631 vs. ExPASy Swiss-Prot
Match: Q78P75 (Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 3.7e-31
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 0


Query: 32  RKVVIKSADMFGDMQKEAVDIAIAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNFG 91
           RK VIK+ADM  DMQ++AVD A  A EKY +EKD+A  IK+EFDK++ PTWHCIVGRNFG
Sbjct: 4   RKAVIKNADMSEDMQQDAVDCATQAMEKYNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFG 63

Query: 92  SYVTHETNHFVYFYLDQKAVLLFKSG 118
           SYVTHET HF+YFYL Q A+LLFKSG
Sbjct: 64  SYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of MS014631 vs. ExPASy TrEMBL
Match: A0A6J1C8U0 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111009373 PE=3 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 9.6e-59
Identity = 117/117 (100.00%), Postives = 117/117 (100.00%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY
Sbjct: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]

BLAST of MS014631 vs. ExPASy TrEMBL
Match: A0A6J1G0U9 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 1.0e-52
Identity = 102/117 (87.18%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MN D+KR+NP+ LMVKPESEDRKPSSA P+ +K+VIKSADMFGDMQKEAVDIAIAAFEK+
Sbjct: 1   MNHDSKRSNPSPLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           +VEKDVAEQIK+EFDKRHGPTWHC++GRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 117

[Close]

BLAST of MS014631 vs. ExPASy TrEMBL
Match: A0A6J1IC60 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 8.7e-52
Identity = 103/117 (88.03%), Postives = 113/117 (96.58%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MN D+KR+NP SLMVKPESEDRKPSSA P+ +K+VIKSADMFGDMQKEAVDIAIAAFEK+
Sbjct: 1   MNHDSKRSNP-SLMVKPESEDRKPSSAAPVGKKIVIKSADMFGDMQKEAVDIAIAAFEKH 60

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           +VEKDVAEQIK+EFDKRHGPTWHC++GRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 61  SVEKDVAEQIKKEFDKRHGPTWHCVIGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 116

[Close]

BLAST of MS014631 vs. ExPASy TrEMBL
Match: A0A6J1IQ69 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 6.9e-49
Identity = 99/117 (84.62%), Postives = 109/117 (93.16%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSSAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKY 60
           MNQ++KR+NP  LMVKPESEDRK SS    A+K+VIKSADMFG MQKEAVDIAIAAFEK+
Sbjct: 29  MNQESKRSNPNPLMVKPESEDRKASSVAAAAKKIVIKSADMFGHMQKEAVDIAIAAFEKH 88

Query: 61  AVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           +VEKDVAEQIK+EFD+RHGPTWHCIVGRNFGSYVTHE+NHFVYFYLDQKAVLLFKSG
Sbjct: 89  SVEKDVAEQIKKEFDQRHGPTWHCIVGRNFGSYVTHESNHFVYFYLDQKAVLLFKSG 145

[Close]

BLAST of MS014631 vs. ExPASy TrEMBL
Match: A0A6J1GVA3 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111457511 PE=3 SV=1)

HSP 1 Score: 200.7 bits (509), Expect = 3.4e-48
Identity = 100/118 (84.75%), Postives = 110/118 (93.22%), Query Frame = 0


Query: 1   MNQDAKRTNPASLMVKPESEDRKPSS-APPLARKVVIKSADMFGDMQKEAVDIAIAAFEK 60
           MNQ++KR+NP  LMVKPESEDRK SS A   A+K+VIKSADMFGDMQKEAVDIAIAAFEK
Sbjct: 1   MNQESKRSNPNPLMVKPESEDRKASSVAAAAAKKIVIKSADMFGDMQKEAVDIAIAAFEK 60

Query: 61  YAVEKDVAEQIKREFDKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           ++VEKDVAE IK+EFD+RHGPTWHCIVGRNFGSYVTHE+NHFVYFYLDQKAVLLFKSG
Sbjct: 61  HSVEKDVAEHIKKEFDQRHGPTWHCIVGRNFGSYVTHESNHFVYFYLDQKAVLLFKSG 118

[Close]

BLAST of MS014631 vs. TAIR 10
Match: AT4G15930.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 161.4 bits (407), Expect = 4.4e-40
Identity = 77/103 (74.76%), Postives = 90/103 (87.38%), Query Frame = 0


Query: 20  EDRKPS-----SAPPLARKVVIKSADMFGDMQKEAVDIAIAAFEKYAVEKDVAEQIKREF 79
           +DR+ S     ++PP  ++ VIKSADM  DMQKEA++IAI+AFEKY+VEKD+AE IK+EF
Sbjct: 21  DDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKYSVEKDIAENIKKEF 80

Query: 80  DKRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 118
           DK+HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG
Sbjct: 81  DKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG 123

[Close]

BLAST of MS014631 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.3e-15
Identity = 43/86 (50.00%), Postives = 58/86 (67.44%), Query Frame = 0


Query: 34  VVIKSADMFGDMQKEAVDIA---IAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNF 93
           V I +ADM G MQ  A   A   + + EK++  K +A  +K+EFDK +GP WHCIVG +F
Sbjct: 117 VRILAADMPGFMQAHAFRCARMTLDSLEKFS-SKHMAFNLKKEFDKGYGPAWHCIVGSSF 176

Query: 94  GSYVTHETNHFVYFYLDQKAVLLFKS 117
           GS+VTH T  F+YF +D+  VLLFK+
Sbjct: 177 GSFVTHSTGCFIYFSMDKLYVLLFKT 201

[Close]

BLAST of MS014631 vs. TAIR 10
Match: AT1G23220.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.2e-13
Identity = 37/86 (43.02%), Postives = 54/86 (62.79%), Query Frame = 0


Query: 34  VVIKSADMFGDMQKEAVDIA---IAAFEKYAVEKDVAEQIKREFDKRHGPTWHCIVGRNF 93
           V ++++DM    Q  A  ++   + A    A  K +A  +K++FD  +GP WHCIVG +F
Sbjct: 36  VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSF 95

Query: 94  GSYVTHETNHFVYFYLDQKAVLLFKS 117
           GSYVTH T  F+YF +D+  VLLFK+
Sbjct: 96  GSYVTHSTGGFLYFQIDKVYVLLFKT 121

[Close]

BLAST of MS014631 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 69.3 bits (168), Expect = 2.3e-12
Identity = 35/88 (39.77%), Postives = 52/88 (59.09%), Query Frame = 0


Query: 30  LARKVVIKSADMFGDMQKEAVDIAIAAFEKYAVE--KDVAEQIKREFDKRHGPTWHCIVG 89
           L  K +++ +DM   MQ +A+  A  A + + V   K +A  IK+EFD+R+G  W C+VG
Sbjct: 2   LEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVG 61

Query: 90  RNFGSYVTHETNHFVYFYLDQKAVLLFK 116
            NFG + TH    F+YF L+    L+FK
Sbjct: 62  SNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of MS014631 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 66.6 bits (161), Expect = 1.5e-11
Identity = 34/88 (38.64%), Postives = 50/88 (56.82%), Query Frame = 0


Query: 30  LARKVVIKSADMFGDMQKEAVDIAIAAFEKYAV--EKDVAEQIKREFDKRHGPTWHCIVG 89
           L  K  ++  DM   MQ +A+ IA  + + + V     +A  IK+EFD+R+G  W C+VG
Sbjct: 2   LEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVG 61

Query: 90  RNFGSYVTHETNHFVYFYLDQKAVLLFK 116
            NFG + TH    F+YF+L     L+FK
Sbjct: 62  TNFGCFFTHSKGTFIYFHLGTLNFLIFK 89

The following BLAST results are available for this feature:

BLAST of MS014631 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022138126.1	2.0e-58	100.00	dynein light chain 1, cytoplasmic [Momordica charantia]	[more]
XP_022945423.1	2.1e-52	87.18	dynein light chain 1, cytoplasmic-like [Cucurbita moschata]	[more]
XP_022973755.1	1.8e-51	88.03	dynein light chain 1, cytoplasmic-like isoform X1 [Cucurbita maxima]	[more]
XP_038904701.1	1.1e-48	81.20	dynein light chain 1, cytoplasmic-like [Benincasa hispida]	[more]
XP_022979977.1	1.4e-48	84.62	dynein 8 kDa light chain, flagellar outer arm-like [Cucurbita maxima]	[more]

BLAST of MS014631 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q22799	3.7e-31	70.93	Dynein light chain 1, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=dlc-1 PE=...	[more]
Q3MHR3	3.7e-31	72.09	Dynein light chain 2, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL2 PE=3 SV=1	[more]
Q96FJ2	3.7e-31	72.09	Dynein light chain 2, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL2 PE=1 SV=1	[more]
Q9D0M5	3.7e-31	72.09	Dynein light chain 2, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll2 PE=1 SV=1	[more]
Q78P75	3.7e-31	72.09	Dynein light chain 2, cytoplasmic OS=Rattus norvegicus OX=10116 GN=Dynll2 PE=1 S...	[more]

BLAST of MS014631 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C8U0	9.6e-59	100.00	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111009373 PE=3 SV=1	[more]
A0A6J1G0U9	1.0e-52	87.18	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111449637 PE=3 SV=1	[more]
A0A6J1IC60	8.7e-52	88.03	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111472324 PE=3 SV=1	[more]
A0A6J1IQ69	6.9e-49	84.62	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111479508 PE=3 SV=1	[more]
A0A6J1GVA3	3.4e-48	84.75	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111457511 PE=3 SV=1	[more]

BLAST of MS014631 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G15930.1	4.4e-40	74.76	Dynein light chain type 1 family protein	[more]
AT5G20110.1	1.3e-15	50.00	Dynein light chain type 1 family protein	[more]
AT1G23220.1	1.2e-13	43.02	Dynein light chain type 1 family protein	[more]
AT1G52240.2	2.3e-12	39.77	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	1.5e-11	38.64	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 29..116 e-value: 1.4E-51 score: 187.4
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 33..116 e-value: 3.7E-37 score: 126.6
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 24..117
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 30..117 e-value: 4.3E-40 score: 137.8
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 28..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	PANTHER	PTHR11886:SF95	DYNEIN LIGHT CHAIN	coord: 24..117
IPR019763	Dynein light chain, type 1/2, conserved site	PROSITE	PS01239	DYNEIN_LIGHT_1	coord: 83..97

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014631.1	MS014631.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex
cellular_component	GO:0005875	microtubule associated complex