MS014606 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGGCGTGTGGGTGTTCGACGACAACGGCGTGATCCGTCTGGCGGCGGCGGAGGGGGAGGCGCGGCGGAGGAAAGTGCTGGTCCACACGCCGACGAACGAGGAGATGACGTCATACACGGTGCTGAAAAATAAGCTGCGTTCCGTCGGGTGGGAGGTCTATTACGAAGACTCGGAGATGGTGCAGTTTCACAAGCCCTCCTCCGTGGACCTCATTTCTCTCCCCGCCGACTTCGCCAAGCTCAAGCCCAGGCACCTATACGACATCGTTGTGAGGAACCGTAATCTTTTCCAAGTTCGAGATATC ATGTCCGGCGTGTGGGTGTTCGACGACAACGGCGTGATCCGTCTGGCGGCGGCGGAGGGGGAGGCGCGGCGGAGGAAAGTGCTGGTCCACACGCCGACGAACGAGGAGATGACGTCATACACGGTGCTGAAAAATAAGCTGCGTTCCGTCGGGTGGGAGGTCTATTACGAAGACTCGGAGATGGTGCAGTTTCACAAGCCCTCCTCCGTGGACCTCATTTCTCTCCCCGCCGACTTCGCCAAGCTCAAGCCCAGGCACCTATACGACATCGTTGTGAGGAACCGTAATCTTTTCCAAGTTCGAGATATC ATGTCCGGCGTGTGGGTGTTCGACGACAACGGCGTGATCCGTCTGGCGGCGGCGGAGGGGGAGGCGCGGCGGAGGAAAGTGCTGGTCCACACGCCGACGAACGAGGAGATGACGTCATACACGGTGCTGAAAAATAAGCTGCGTTCCGTCGGGTGGGAGGTCTATTACGAAGACTCGGAGATGGTGCAGTTTCACAAGCCCTCCTCCGTGGACCTCATTTCTCTCCCCGCCGACTTCGCCAAGCTCAAGCCCAGGCACCTATACGACATCGTTGTGAGGAACCGTAATCTTTTCCAAGTTCGAGATATC MSGVWVFDDNGVIRLAAAEGEARRRKVLVHTPTNEEMTSYTVLKNKLRSVGWEVYYEDSEMVQFHKPSSVDLISLPADFAKLKPRHLYDIVVRNRNLFQVRDI Homology
BLAST of MS014606 vs. NCBI nr
Match: XP_022138062.1 (flowering-promoting factor 1-like protein 4 [Momordica charantia]) HSP 1 Score: 211.5 bits (537), Expect = 3.5e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of MS014606 vs. NCBI nr
Match: XP_022956217.1 (flowering-promoting factor 1-like protein 1 [Cucurbita moschata] >KAG6582219.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7018618.1 Flowering-promoting factor 1-like protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 161.4 bits (407), Expect = 4.2e-36 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of MS014606 vs. NCBI nr
Match: XP_022979994.1 (flowering-promoting factor 1-like protein 1 [Cucurbita maxima]) HSP 1 Score: 160.6 bits (405), Expect = 7.2e-36 Identity = 80/108 (74.07%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of MS014606 vs. NCBI nr
Match: XP_023528953.1 (flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 159.1 bits (401), Expect = 2.1e-35 Identity = 79/108 (73.15%), Postives = 90/108 (83.33%), Query Frame = 0
BLAST of MS014606 vs. NCBI nr
Match: KGN57101.1 (hypothetical protein Csa_010574 [Cucumis sativus]) HSP 1 Score: 155.6 bits (392), Expect = 2.3e-34 Identity = 78/111 (70.27%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of MS014606 vs. ExPASy Swiss-Prot
Match: Q0JEF5 (Flowering-promoting factor 1-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0282400 PE=3 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 1.3e-24 Identity = 56/111 (50.45%), Postives = 80/111 (72.07%), Query Frame = 0
BLAST of MS014606 vs. ExPASy Swiss-Prot
Match: Q9LGE3 (Flowering-promoting factor 1-like protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=RAA1 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.9e-24 Identity = 59/109 (54.13%), Postives = 75/109 (68.81%), Query Frame = 0
BLAST of MS014606 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1) HSP 1 Score: 110.2 bits (274), Expect = 1.5e-23 Identity = 58/109 (53.21%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of MS014606 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 1.9e-23 Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of MS014606 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1) HSP 1 Score: 109.0 bits (271), Expect = 3.2e-23 Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of MS014606 vs. ExPASy TrEMBL
Match: A0A6J1C9Z8 (flowering-promoting factor 1-like protein 4 OS=Momordica charantia OX=3673 GN=LOC111009321 PE=3 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 1.7e-51 Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
BLAST of MS014606 vs. ExPASy TrEMBL
Match: A0A6J1GVQ4 (flowering-promoting factor 1-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111457977 PE=3 SV=1) HSP 1 Score: 161.4 bits (407), Expect = 2.0e-36 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of MS014606 vs. ExPASy TrEMBL
Match: A0A6J1IY48 (flowering-promoting factor 1-like protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111479520 PE=3 SV=1) HSP 1 Score: 160.6 bits (405), Expect = 3.5e-36 Identity = 80/108 (74.07%), Postives = 91/108 (84.26%), Query Frame = 0
BLAST of MS014606 vs. ExPASy TrEMBL
Match: A0A0A0LAK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G153750 PE=3 SV=1) HSP 1 Score: 155.6 bits (392), Expect = 1.1e-34 Identity = 78/111 (70.27%), Postives = 88/111 (79.28%), Query Frame = 0
BLAST of MS014606 vs. ExPASy TrEMBL
Match: A0A5A7U7L7 (Flowering-promoting factor 1-like protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold23597G00010 PE=3 SV=1) HSP 1 Score: 153.7 bits (387), Expect = 4.2e-34 Identity = 77/114 (67.54%), Postives = 91/114 (79.82%), Query Frame = 0
BLAST of MS014606 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 109.8 bits (273), Expect = 1.3e-24 Identity = 58/111 (52.25%), Postives = 77/111 (69.37%), Query Frame = 0
BLAST of MS014606 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 ) HSP 1 Score: 109.0 bits (271), Expect = 2.3e-24 Identity = 57/109 (52.29%), Postives = 76/109 (69.72%), Query Frame = 0
BLAST of MS014606 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 ) HSP 1 Score: 107.1 bits (266), Expect = 8.8e-24 Identity = 55/124 (44.35%), Postives = 77/124 (62.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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