MS014590 (gene) Bitter gourd (TR) v1

Overview


Name	MS014590
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	transcription factor TCP13-like
Location	scaffold553: 1135933 .. 1136967 (-)
RNA-Seq Expression	MS014590
Synteny	MS014590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCAGACAAACATAATGATGAGAGACATAAGATGATTACAAATTCAAGAGAAGAGGATAATTCGCCTTCAAAACTGGAAGCTGATCATACTGGAAAAGTTAGCAAATGCAAATCATCAGCTGAAGCTGCAGCTTCATCAAGTTCATCTCCATGGCTTAGGTTGAAAGATCCGAGAATTGTGCGCGTTTCCCGAGCTTTCGGAGGCAAAGATCGACACAGCAAAGTTTGCACCATAAGAGGGCTACGCGACAGGCGCGTAAGGCTTTCGGTTTCCACTGCAATTCAGTTATATGATCTTCAGGATCGGCTCGGCCTCAACCAGCCGAGCAAGGTCGTCGACTGGTTGCTCAATGCCGCTAAGGATGAGATTGATGAACTTCCTCCATTGCCAATCCCATCCGGAACCACCCTCGGCCTCAACTTCCAATCCATGTTAGCTCATACCAACTCGTATGGATCGGAATTCAAAATTAACCCTCGCGACGAGGGCGAAGAAGAAAGGCAACACAAAAACGATACACCCAATTCGTCTCACCCTCCTTCATTCTCCGCTCTATTAAACAACGTCGTTGCGAACGGCAACGCCCCATTCGGGTATCACTGGGAGCCATCAAATCTTCCATTCTTGTCGTCGTCGTCTCACCACCCTACGGGAAGCCATGGATTCTTTACGTCTCAGGCCGCGGCTGTGACGGCTGAAGATCTCCATAACTTCAATGTCTTGTCCTTGCCACGCCCATTGCCTAATTTGTCTCTCTCAACAGGGTCTCAAATTTTAGTTTGCCCACCAGGAATCTCACAGTCTTCTCTAGATCAGCTTGATCCAAGACAAGTCAATAATCACTTGCAAATGTTCACCTCGAGTTCTCAAAATTTCTTGCTTCACAATAATTGTCTCACATCTCCCTTGAACTCAATAAACCAACCACCCAATAATGTTAGGCCCTTTCATTTCAGTATGGCTCCCAAATTTGTTTCTCAAGAAAAGAATAATGGAGATCAACCAAATAAGGATGATGAGTTTGCTTCTGATGAA

mRNA sequence

GCAGACAAACATAATGATGAGAGACATAAGATGATTACAAATTCAAGAGAAGAGGATAATTCGCCTTCAAAACTGGAAGCTGATCATACTGGAAAAGTTAGCAAATGCAAATCATCAGCTGAAGCTGCAGCTTCATCAAGTTCATCTCCATGGCTTAGGTTGAAAGATCCGAGAATTGTGCGCGTTTCCCGAGCTTTCGGAGGCAAAGATCGACACAGCAAAGTTTGCACCATAAGAGGGCTACGCGACAGGCGCGTAAGGCTTTCGGTTTCCACTGCAATTCAGTTATATGATCTTCAGGATCGGCTCGGCCTCAACCAGCCGAGCAAGGTCGTCGACTGGTTGCTCAATGCCGCTAAGGATGAGATTGATGAACTTCCTCCATTGCCAATCCCATCCGGAACCACCCTCGGCCTCAACTTCCAATCCATGTTAGCTCATACCAACTCGTATGGATCGGAATTCAAAATTAACCCTCGCGACGAGGGCGAAGAAGAAAGGCAACACAAAAACGATACACCCAATTCGTCTCACCCTCCTTCATTCTCCGCTCTATTAAACAACGTCGTTGCGAACGGCAACGCCCCATTCGGGTATCACTGGGAGCCATCAAATCTTCCATTCTTGTCGTCGTCGTCTCACCACCCTACGGGAAGCCATGGATTCTTTACGTCTCAGGCCGCGGCTGTGACGGCTGAAGATCTCCATAACTTCAATGTCTTGTCCTTGCCACGCCCATTGCCTAATTTGTCTCTCTCAACAGGGTCTCAAATTTTAGTTTGCCCACCAGGAATCTCACAGTCTTCTCTAGATCAGCTTGATCCAAGACAAGTCAATAATCACTTGCAAATGTTCACCTCGAGTTCTCAAAATTTCTTGCTTCACAATAATTGTCTCACATCTCCCTTGAACTCAATAAACCAACCACCCAATAATGTTAGGCCCTTTCATTTCAGTATGGCTCCCAAATTTGTTTCTCAAGAAAAGAATAATGGAGATCAACCAAATAAGGATGATGAGTTTGCTTCTGATGAA

Coding sequence (CDS)

GCAGACAAACATAATGATGAGAGACATAAGATGATTACAAATTCAAGAGAAGAGGATAATTCGCCTTCAAAACTGGAAGCTGATCATACTGGAAAAGTTAGCAAATGCAAATCATCAGCTGAAGCTGCAGCTTCATCAAGTTCATCTCCATGGCTTAGGTTGAAAGATCCGAGAATTGTGCGCGTTTCCCGAGCTTTCGGAGGCAAAGATCGACACAGCAAAGTTTGCACCATAAGAGGGCTACGCGACAGGCGCGTAAGGCTTTCGGTTTCCACTGCAATTCAGTTATATGATCTTCAGGATCGGCTCGGCCTCAACCAGCCGAGCAAGGTCGTCGACTGGTTGCTCAATGCCGCTAAGGATGAGATTGATGAACTTCCTCCATTGCCAATCCCATCCGGAACCACCCTCGGCCTCAACTTCCAATCCATGTTAGCTCATACCAACTCGTATGGATCGGAATTCAAAATTAACCCTCGCGACGAGGGCGAAGAAGAAAGGCAACACAAAAACGATACACCCAATTCGTCTCACCCTCCTTCATTCTCCGCTCTATTAAACAACGTCGTTGCGAACGGCAACGCCCCATTCGGGTATCACTGGGAGCCATCAAATCTTCCATTCTTGTCGTCGTCGTCTCACCACCCTACGGGAAGCCATGGATTCTTTACGTCTCAGGCCGCGGCTGTGACGGCTGAAGATCTCCATAACTTCAATGTCTTGTCCTTGCCACGCCCATTGCCTAATTTGTCTCTCTCAACAGGGTCTCAAATTTTAGTTTGCCCACCAGGAATCTCACAGTCTTCTCTAGATCAGCTTGATCCAAGACAAGTCAATAATCACTTGCAAATGTTCACCTCGAGTTCTCAAAATTTCTTGCTTCACAATAATTGTCTCACATCTCCCTTGAACTCAATAAACCAACCACCCAATAATGTTAGGCCCTTTCATTTCAGTATGGCTCCCAAATTTGTTTCTCAAGAAAAGAATAATGGAGATCAACCAAATAAGGATGATGAGTTTGCTTCTGATGAA

Protein sequence

ADKHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEEERQHKNDTPNSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAEDLHNFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLLHNNCLTSPLNSINQPPNNVRPFHFSMAPKFVSQEKNNGDQPNKDDEFASDE

Homology

[Close]

BLAST of MS014590 vs. NCBI nr
Match: XP_022158507.1 (transcription factor TCP13-like [Momordica charantia])

HSP 1 Score: 672.5 bits (1734), Expect = 1.9e-189
Identity = 340/343 (99.13%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62
           KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV
Sbjct: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62

Query: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122
           SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE
Sbjct: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122

Query: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEEERQHKNDTPNSSHPPSF 182
           IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEEERQHKNDTPNSSHPPSF
Sbjct: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEEERQHKNDTPNSSHPPSF 182

Query: 183 SALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAEDLHNFNVLS 242
           SALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAA  AEDLHNFNVLS
Sbjct: 183 SALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAA--AEDLHNFNVLS 242

Query: 243 LPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLLHNNCLTSP 302
           LPRPLPNLSLSTGSQILVCPPGISQ+SLDQLDPRQVNNHLQMFTSSSQNFLLHNNCLTSP
Sbjct: 243 LPRPLPNLSLSTGSQILVCPPGISQTSLDQLDPRQVNNHLQMFTSSSQNFLLHNNCLTSP 302

Query: 303 LNSINQPPNNVRPFHFSMAPKFVSQEKNNGDQPNKDDEFASDE 346
           LNSINQPPNNVRPFHFSMAPKFVSQEKNNGDQPNKDDEFASDE
Sbjct: 303 LNSINQPPNNVRPFHFSMAPKFVSQEKNNGDQPNKDDEFASDE 343

[Close]

BLAST of MS014590 vs. NCBI nr
Match: XP_022980679.1 (transcription factor TCP17-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 316.6 bits (810), Expect = 2.6e-82
Identity = 207/353 (58.64%), Postives = 241/353 (68.27%), Query Frame = 0


Query: 1   ADKHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIV 60
           A KH DERH MITNS+EE NSP KL A          SS+ +AA++ ++PWLRLKDPRIV
Sbjct: 3   AGKH-DERHTMITNSKEE-NSPPKLAA----------SSSSSAAAAVATPWLRLKDPRIV 62

Query: 61  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 120
           RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AK
Sbjct: 63  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAK 122

Query: 121 DEIDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPR------DEGEEERQHKNDTP 180
           DEIDELPPLPIPS  +LGL++QSML    ++  EFKIN        D+ +E++QHK    
Sbjct: 123 DEIDELPPLPIPS-ASLGLHYQSMLPPHTAHRPEFKINSGIDKVEIDDDDEQKQHK---- 182

Query: 181 NSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAED 240
           ++S+P SFSALLNNV A    PFG+HW+P      SSSS   T +  FFTSQ     AED
Sbjct: 183 SNSNPSSFSALLNNVSA---PPFGFHWDP------SSSSSSSTTNLPFFTSQ-----AED 242

Query: 241 LHNFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLL 300
           LHNFN ++       LSLSTGSQ L                 + NNHL       QNF +
Sbjct: 243 LHNFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNFFI 293

Query: 301 HNNCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
           +N+  T  P++SI  P   VRPFHFSMA KFVSQ+K NNGD  +K+D+F SDE
Sbjct: 303 NNSLNTPPPMHSITHPA--VRPFHFSMATKFVSQDKNNNGDPAHKEDDFGSDE 293

[Close]

BLAST of MS014590 vs. NCBI nr
Match: XP_022980680.1 (transcription factor TCP17-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 315.8 bits (808), Expect = 4.5e-82
Identity = 204/351 (58.12%), Postives = 240/351 (68.38%), Query Frame = 0


Query: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62
           + +DERH MITNS+EE NSP KL A          SS+ +AA++ ++PWLRLKDPRIVRV
Sbjct: 2   RKHDERHTMITNSKEE-NSPPKLAA----------SSSSSAAAAVATPWLRLKDPRIVRV 61

Query: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122
           SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDE
Sbjct: 62  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDE 121

Query: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPR------DEGEEERQHKNDTPNS 182
           IDELPPLPIPS  +LGL++QSML    ++  EFKIN        D+ +E++QHK    ++
Sbjct: 122 IDELPPLPIPS-ASLGLHYQSMLPPHTAHRPEFKINSGIDKVEIDDDDEQKQHK----SN 181

Query: 183 SHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAEDLH 242
           S+P SFSALLNNV A    PFG+HW+P      SSSS   T +  FFTSQ     AEDLH
Sbjct: 182 SNPSSFSALLNNVSA---PPFGFHWDP------SSSSSSSTTNLPFFTSQ-----AEDLH 241

Query: 243 NFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLLHN 302
           NFN ++       LSLSTGSQ L                 + NNHL       QNF ++N
Sbjct: 242 NFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNFFINN 291

Query: 303 NCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
           +  T  P++SI  P   VRPFHFSMA KFVSQ+K NNGD  +K+D+F SDE
Sbjct: 302 SLNTPPPMHSITHPA--VRPFHFSMATKFVSQDKNNNGDPAHKEDDFGSDE 291

[Close]

BLAST of MS014590 vs. NCBI nr
Match: XP_023527017.1 (transcription factor TCP17-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 314.3 bits (804), Expect = 1.3e-81
Identity = 210/355 (59.15%), Postives = 239/355 (67.32%), Query Frame = 0


Query: 1   ADKHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIV 60
           A KH DERH MITNS+EE NSP KL A          SS+ AA    ++PWLRLKDPRIV
Sbjct: 3   AGKH-DERHTMITNSKEE-NSPPKLAA---------SSSSSAAV---ATPWLRLKDPRIV 62

Query: 61  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 120
           RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AK
Sbjct: 63  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAK 122

Query: 121 DEIDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKIN--------PRDEGEEERQHKND 180
           DEIDELPPLPIPS  +LGL++QSML    ++ SEFKIN          D+ +E++QHK  
Sbjct: 123 DEIDELPPLPIPS-ASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDDDEQKQHK-- 182

Query: 181 TPNSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTA 240
             ++S+P SFSALLNNV A    PFG+HW+PS    LSSSS   T +  FFTSQ     A
Sbjct: 183 --SNSNPSSFSALLNNVSA---PPFGFHWDPS----LSSSSSSSTTNLPFFTSQ-----A 242

Query: 241 EDLHNFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNF 300
           EDLHNFN ++       LSLSTGSQ L                 + NNHL       QNF
Sbjct: 243 EDLHNFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNF 295

Query: 301 LLHNNCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
            ++N+  T  P++SI  P   VRPFHFSMA KFV+Q K NNGD  NK+D F SDE
Sbjct: 303 FINNSLNTPPPMHSITHPA--VRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 295

[Close]

BLAST of MS014590 vs. NCBI nr
Match: XP_023527016.1 (transcription factor TCP17-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 313.5 bits (802), Expect = 2.2e-81
Identity = 207/353 (58.64%), Postives = 238/353 (67.42%), Query Frame = 0


Query: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62
           + +DERH MITNS+EE NSP KL A          SS+ AA    ++PWLRLKDPRIVRV
Sbjct: 2   RKHDERHTMITNSKEE-NSPPKLAA---------SSSSSAAV---ATPWLRLKDPRIVRV 61

Query: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122
           SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDE
Sbjct: 62  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDE 121

Query: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKIN--------PRDEGEEERQHKNDTP 182
           IDELPPLPIPS  +LGL++QSML    ++ SEFKIN          D+ +E++QHK    
Sbjct: 122 IDELPPLPIPS-ASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDDDEQKQHK---- 181

Query: 183 NSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAED 242
           ++S+P SFSALLNNV A    PFG+HW+PS    LSSSS   T +  FFTSQ     AED
Sbjct: 182 SNSNPSSFSALLNNVSA---PPFGFHWDPS----LSSSSSSSTTNLPFFTSQ-----AED 241

Query: 243 LHNFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLL 302
           LHNFN ++       LSLSTGSQ L                 + NNHL       QNF +
Sbjct: 242 LHNFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNFFI 293

Query: 303 HNNCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
           +N+  T  P++SI  P   VRPFHFSMA KFV+Q K NNGD  NK+D F SDE
Sbjct: 302 NNSLNTPPPMHSITHPA--VRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 293

[Close]

BLAST of MS014590 vs. ExPASy Swiss-Prot
Match: Q9S7W5 (Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 4.1e-38
Identity = 139/332 (41.87%), Postives = 170/332 (51.20%), Query Frame = 0


Query: 5   NDERHKMITNSRE----EDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIV 64
           NDE     T  RE    ED   +++ A     V K       + SSSSS W++ KDPRIV
Sbjct: 10  NDEVAGGATTRREREVKEDQEETEVRATSGKTVIK---KQPTSISSSSSSWMKSKDPRIV 69

Query: 65  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 124
           RVSRAFGGKDRHSKVCT+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+AAK
Sbjct: 70  RVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAK 129

Query: 125 DEIDELPPLPI-PSGTTLGLNFQSMLAHTNSYGSE-----FKINP-RDEGEEERQHKNDT 184
           +EIDELPPLPI P   ++  + QS L      G +     FKIN    +     + +ND 
Sbjct: 130 EEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKSTTTSREENDR 189

Query: 185 PNSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAE 244
                        N+VV   N   G +    NL       HH    H   + QA      
Sbjct: 190 EKGE---------NDVVYTNNHHVGSYGTYHNL----EHHHH---HHQHLSLQA------ 249

Query: 245 DLHNFNVLSLPRPLPNLSLSTGSQILVCPPGIS-----------------QSSLDQLDPR 298
           D H+  + SL  P P       SQILVCP   S                   +++ LDPR
Sbjct: 250 DYHSHQLHSLV-PFP-------SQILVCPMTTSPTTTTIQSLFPSSSSAGSGTMETLDPR 308

[Close]

BLAST of MS014590 vs. ExPASy Swiss-Prot
Match: Q9FME3 (Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.5e-32
Identity = 74/123 (60.16%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 17  EEDNSPSKLEAD----HTGKVSKCKSSAEAAASSSSSPWL-RLKDPRIVRVSRAFGGKDR 76
           +E+   +K E D    H   ++      + ++ SSS  W    ++PRIVRVSR FGGKDR
Sbjct: 7   DEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRTFGGKDR 66

Query: 77  HSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPI 135
           HSKVCT+RGLRDRR+RLSV TAIQLYDLQDRLGL+QPSKV+DWLL AAKD++D+LPPL  
Sbjct: 67  HSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDKLPPLQF 126

[Close]

BLAST of MS014590 vs. ExPASy Swiss-Prot
Match: Q9LEZ9 (Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 8.3e-31
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 41  EAAASSSSSPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQ 100
           E   SS S    R  +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ
Sbjct: 6   EDQKSSLSLLTQRWNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQ 65

Query: 101 DRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSG 135
           +RLGL+QPSKV+DWLL  AK+++D LPPL  P G
Sbjct: 66  ERLGLSQPSKVIDWLLEVAKNDVDLLPPLQFPPG 99

[Close]

BLAST of MS014590 vs. ExPASy Swiss-Prot
Match: Q9C758 (Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 1.7e-23
Identity = 70/160 (43.75%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 58  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 117
           RI+RVSRA GGKDRHSKV T +GLRDRR+RLSV+TAIQ YDLQDRLG +QPSK V+WL+N
Sbjct: 40  RIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLIN 99

Query: 118 AAKDEIDELPPL------------PIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEE 177
           AA D I +LP L               S  + G +  S+L+ +    +E +   R+   E
Sbjct: 100 AASDSITDLPLLNTNFDHLDQNQNQTKSACSSGTSESSLLSLSR---TEIRGKARERARE 159

Query: 178 ERQHKNDTPNSSHPPSFSALLNNVVANGNAPFGYHWEPSN 206
                 D    +   SF+ LL           G+  +PSN
Sbjct: 160 RTAKDRDKDLQNAHSSFTQLLTG---------GFDQQPSN 187

[Close]

BLAST of MS014590 vs. ExPASy Swiss-Prot
Match: Q93V43 (Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 2.2e-23
Identity = 54/72 (75.00%), Postives = 61/72 (84.72%), Query Frame = 0


Query: 58  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 117
           RI+RVSRA GGKDRHSKV T +G RDRRVRLSVSTA+Q YDLQDRLG +QPSK V+WL+ 
Sbjct: 32  RIIRVSRASGGKDRHSKVLTSKGPRDRRVRLSVSTALQFYDLQDRLGYDQPSKAVEWLIK 91

Query: 118 AAKDEIDELPPL 130
           AA+D I ELP L
Sbjct: 92  AAEDSISELPSL 103

[Close]

BLAST of MS014590 vs. ExPASy TrEMBL
Match: A0A6J1DXE9 (transcription factor TCP13-like OS=Momordica charantia OX=3673 GN=LOC111024981 PE=4 SV=1)

HSP 1 Score: 672.5 bits (1734), Expect = 9.1e-190
Identity = 340/343 (99.13%), Postives = 341/343 (99.42%), Query Frame = 0


Query: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62
           KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV
Sbjct: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62

Query: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122
           SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE
Sbjct: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122

Query: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEEERQHKNDTPNSSHPPSF 182
           IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEEERQHKNDTPNSSHPPSF
Sbjct: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEEERQHKNDTPNSSHPPSF 182

Query: 183 SALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAEDLHNFNVLS 242
           SALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAA  AEDLHNFNVLS
Sbjct: 183 SALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAA--AEDLHNFNVLS 242

Query: 243 LPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLLHNNCLTSP 302
           LPRPLPNLSLSTGSQILVCPPGISQ+SLDQLDPRQVNNHLQMFTSSSQNFLLHNNCLTSP
Sbjct: 243 LPRPLPNLSLSTGSQILVCPPGISQTSLDQLDPRQVNNHLQMFTSSSQNFLLHNNCLTSP 302

Query: 303 LNSINQPPNNVRPFHFSMAPKFVSQEKNNGDQPNKDDEFASDE 346
           LNSINQPPNNVRPFHFSMAPKFVSQEKNNGDQPNKDDEFASDE
Sbjct: 303 LNSINQPPNNVRPFHFSMAPKFVSQEKNNGDQPNKDDEFASDE 343

[Close]

BLAST of MS014590 vs. ExPASy TrEMBL
Match: A0A6J1IZY4 (transcription factor TCP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479977 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.3e-82
Identity = 207/353 (58.64%), Postives = 241/353 (68.27%), Query Frame = 0


Query: 1   ADKHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIV 60
           A KH DERH MITNS+EE NSP KL A          SS+ +AA++ ++PWLRLKDPRIV
Sbjct: 3   AGKH-DERHTMITNSKEE-NSPPKLAA----------SSSSSAAAAVATPWLRLKDPRIV 62

Query: 61  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 120
           RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AK
Sbjct: 63  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAK 122

Query: 121 DEIDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPR------DEGEEERQHKNDTP 180
           DEIDELPPLPIPS  +LGL++QSML    ++  EFKIN        D+ +E++QHK    
Sbjct: 123 DEIDELPPLPIPS-ASLGLHYQSMLPPHTAHRPEFKINSGIDKVEIDDDDEQKQHK---- 182

Query: 181 NSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAED 240
           ++S+P SFSALLNNV A    PFG+HW+P      SSSS   T +  FFTSQ     AED
Sbjct: 183 SNSNPSSFSALLNNVSA---PPFGFHWDP------SSSSSSSTTNLPFFTSQ-----AED 242

Query: 241 LHNFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLL 300
           LHNFN ++       LSLSTGSQ L                 + NNHL       QNF +
Sbjct: 243 LHNFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNFFI 293

Query: 301 HNNCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
           +N+  T  P++SI  P   VRPFHFSMA KFVSQ+K NNGD  +K+D+F SDE
Sbjct: 303 NNSLNTPPPMHSITHPA--VRPFHFSMATKFVSQDKNNNGDPAHKEDDFGSDE 293

[Close]

BLAST of MS014590 vs. ExPASy TrEMBL
Match: A0A6J1IX73 (transcription factor TCP17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479977 PE=4 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 2.2e-82
Identity = 204/351 (58.12%), Postives = 240/351 (68.38%), Query Frame = 0


Query: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62
           + +DERH MITNS+EE NSP KL A          SS+ +AA++ ++PWLRLKDPRIVRV
Sbjct: 2   RKHDERHTMITNSKEE-NSPPKLAA----------SSSSSAAAAVATPWLRLKDPRIVRV 61

Query: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122
           SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDE
Sbjct: 62  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDE 121

Query: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPR------DEGEEERQHKNDTPNS 182
           IDELPPLPIPS  +LGL++QSML    ++  EFKIN        D+ +E++QHK    ++
Sbjct: 122 IDELPPLPIPS-ASLGLHYQSMLPPHTAHRPEFKINSGIDKVEIDDDDEQKQHK----SN 181

Query: 183 SHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAEDLH 242
           S+P SFSALLNNV A    PFG+HW+P      SSSS   T +  FFTSQ     AEDLH
Sbjct: 182 SNPSSFSALLNNVSA---PPFGFHWDP------SSSSSSSTTNLPFFTSQ-----AEDLH 241

Query: 243 NFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLLHN 302
           NFN ++       LSLSTGSQ L                 + NNHL       QNF ++N
Sbjct: 242 NFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNFFINN 291

Query: 303 NCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
           +  T  P++SI  P   VRPFHFSMA KFVSQ+K NNGD  +K+D+F SDE
Sbjct: 302 SLNTPPPMHSITHPA--VRPFHFSMATKFVSQDKNNNGDPAHKEDDFGSDE 291

[Close]

BLAST of MS014590 vs. ExPASy TrEMBL
Match: A0A6J1GWB2 (transcription factor TCP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457473 PE=4 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 1.8e-81
Identity = 209/353 (59.21%), Postives = 240/353 (67.99%), Query Frame = 0


Query: 1   ADKHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIV 60
           A KH DERH MITNS+EE NSP KL A          SS+ +AA   ++PWLRLKDPRIV
Sbjct: 3   AGKH-DERHTMITNSKEE-NSPPKLVA----------SSSSSAA--LATPWLRLKDPRIV 62

Query: 61  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 120
           RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AK
Sbjct: 63  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAK 122

Query: 121 DEIDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPR------DEGEEERQHKNDTP 180
           DEIDELPPLPIPS  +LGL++QSML    ++ SEFKIN        D+ +E++QHK    
Sbjct: 123 DEIDELPPLPIPS-ASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHK---- 182

Query: 181 NSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAED 240
           ++S+P SFSALLNNV A    PFG+HW+PS+    SSSS   T +  FFTSQ     AED
Sbjct: 183 SNSNPSSFSALLNNVSA---PPFGFHWDPSSSS--SSSSSSSTTNLPFFTSQ-----AED 242

Query: 241 LHNFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLL 300
           LHNFN ++       LSLSTGSQ L                 + NNHL       QNF +
Sbjct: 243 LHNFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNFFI 295

Query: 301 HNNCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
           +N+  T  P++SI  P   VRPFHFSMA KFV+Q K NNGD  NK+D F SDE
Sbjct: 303 NNSLNTPPPMHSITHPA--VRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 295

[Close]

BLAST of MS014590 vs. ExPASy TrEMBL
Match: A0A6J1GV58 (transcription factor TCP17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457473 PE=4 SV=1)

HSP 1 Score: 311.6 bits (797), Expect = 4.1e-81
Identity = 206/351 (58.69%), Postives = 239/351 (68.09%), Query Frame = 0


Query: 3   KHNDERHKMITNSREEDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIVRV 62
           + +DERH MITNS+EE NSP KL A          SS+ +AA   ++PWLRLKDPRIVRV
Sbjct: 2   RKHDERHTMITNSKEE-NSPPKLVA----------SSSSSAA--LATPWLRLKDPRIVRV 61

Query: 63  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDE 122
           SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN AKDE
Sbjct: 62  SRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNVAKDE 121

Query: 123 IDELPPLPIPSGTTLGLNFQSMLAHTNSYGSEFKINPR------DEGEEERQHKNDTPNS 182
           IDELPPLPIPS  +LGL++QSML    ++ SEFKIN        D+ +E++QHK    ++
Sbjct: 122 IDELPPLPIPS-ASLGLHYQSMLPPHIAHRSEFKINSGIDKVEIDDDDEQKQHK----SN 181

Query: 183 SHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAEDLH 242
           S+P SFSALLNNV A    PFG+HW+PS+    SSSS   T +  FFTSQ     AEDLH
Sbjct: 182 SNPSSFSALLNNVSA---PPFGFHWDPSSSS--SSSSSSSTTNLPFFTSQ-----AEDLH 241

Query: 243 NFNVLSLPRPLPNLSLSTGSQILVCPPGISQSSLDQLDPRQVNNHLQMFTSSSQNFLLHN 302
           NFN ++       LSLSTGSQ L                 + NNHL       QNF ++N
Sbjct: 242 NFNHVT------PLSLSTGSQFL-----------------EFNNHLH------QNFFINN 293

Query: 303 NCLT-SPLNSINQPPNNVRPFHFSMAPKFVSQEK-NNGDQPNKDDEFASDE 346
           +  T  P++SI  P   VRPFHFSMA KFV+Q K NNGD  NK+D F SDE
Sbjct: 302 SLNTPPPMHSITHPA--VRPFHFSMATKFVAQHKNNNGDPANKEDGFGSDE 293

[Close]

BLAST of MS014590 vs. TAIR 10
Match: AT3G02150.2 (plastid transcription factor 1 )

HSP 1 Score: 160.2 bits (404), Expect = 2.9e-39
Identity = 139/332 (41.87%), Postives = 170/332 (51.20%), Query Frame = 0


Query: 5   NDERHKMITNSRE----EDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIV 64
           NDE     T  RE    ED   +++ A     V K       + SSSSS W++ KDPRIV
Sbjct: 10  NDEVAGGATTRREREVKEDQEETEVRATSGKTVIK---KQPTSISSSSSSWMKSKDPRIV 69

Query: 65  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 124
           RVSRAFGGKDRHSKVCT+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+AAK
Sbjct: 70  RVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAK 129

Query: 125 DEIDELPPLPI-PSGTTLGLNFQSMLAHTNSYGSE-----FKINP-RDEGEEERQHKNDT 184
           +EIDELPPLPI P   ++  + QS L      G +     FKIN    +     + +ND 
Sbjct: 130 EEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKSTTTSREENDR 189

Query: 185 PNSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAE 244
                        N+VV   N   G +    NL       HH    H   + QA      
Sbjct: 190 EKGE---------NDVVYTNNHHVGSYGTYHNL----EHHHH---HHQHLSLQA------ 249

Query: 245 DLHNFNVLSLPRPLPNLSLSTGSQILVCPPGIS-----------------QSSLDQLDPR 298
           D H+  + SL  P P       SQILVCP   S                   +++ LDPR
Sbjct: 250 DYHSHQLHSLV-PFP-------SQILVCPMTTSPTTTTIQSLFPSSSSAGSGTMETLDPR 308

[Close]

BLAST of MS014590 vs. TAIR 10
Match: AT3G02150.1 (plastid transcription factor 1 )

HSP 1 Score: 150.6 bits (379), Expect = 2.3e-36
Identity = 122/287 (42.51%), Postives = 150/287 (52.26%), Query Frame = 0


Query: 5   NDERHKMITNSRE----EDNSPSKLEADHTGKVSKCKSSAEAAASSSSSPWLRLKDPRIV 64
           NDE     T  RE    ED   +++ A     V K       + SSSSS W++ KDPRIV
Sbjct: 10  NDEVAGGATTRREREVKEDQEETEVRATSGKTVIK---KQPTSISSSSSSWMKSKDPRIV 69

Query: 65  RVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAK 124
           RVSRAFGGKDRHSKVCT+RGLRDRRVRLSV TAIQLYDLQ+RLG++QPSK VDWLL+AAK
Sbjct: 70  RVSRAFGGKDRHSKVCTLRGLRDRRVRLSVPTAIQLYDLQERLGVDQPSKAVDWLLDAAK 129

Query: 125 DEIDELPPLPI-PSGTTLGLNFQSMLAHTNSYGSE-----FKINP-RDEGEEERQHKNDT 184
           +EIDELPPLPI P   ++  + QS L      G +     FKIN    +     + +ND 
Sbjct: 130 EEIDELPPLPISPENFSIFNHHQSFLNLGQRPGQDPTQLGFKINGCVQKSTTTSREENDR 189

Query: 185 PNSSHPPSFSALLNNVVANGNAPFGYHWEPSNLPFLSSSSHHPTGSHGFFTSQAAAVTAE 244
                        N+VV   N   G +    NL       HH    H    +   +    
Sbjct: 190 EKGE---------NDVVYTNNHHVGSYGTYHNL-----EHHHHHHQHLSLQADYHSHQLH 249

Query: 245 DLHNFNVLSLPRPLPNLSLSTGSQILVCPPGISQSS--LDQLDPRQV 279
            L  F    L  P+     +T  Q L  P   S  S  ++ LDPRQ+
Sbjct: 250 SLVPFPSQILVCPMTTSPTTTTIQSLF-PSSSSAGSGTMETLDPRQM 278

[Close]

BLAST of MS014590 vs. TAIR 10
Match: AT5G60970.1 (TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 )

HSP 1 Score: 141.7 bits (356), Expect = 1.1e-33
Identity = 74/123 (60.16%), Postives = 91/123 (73.98%), Query Frame = 0


Query: 17  EEDNSPSKLEAD----HTGKVSKCKSSAEAAASSSSSPWL-RLKDPRIVRVSRAFGGKDR 76
           +E+   +K E D    H   ++      + ++ SSS  W    ++PRIVRVSR FGGKDR
Sbjct: 7   DEEEIQAKQERDQNQNHQVNLNHMLQQQQPSSVSSSRQWTSAFRNPRIVRVSRTFGGKDR 66

Query: 77  HSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLNAAKDEIDELPPLPI 135
           HSKVCT+RGLRDRR+RLSV TAIQLYDLQDRLGL+QPSKV+DWLL AAKD++D+LPPL  
Sbjct: 67  HSKVCTVRGLRDRRIRLSVPTAIQLYDLQDRLGLSQPSKVIDWLLEAAKDDVDKLPPLQF 126

[Close]

BLAST of MS014590 vs. TAIR 10
Match: AT5G08070.1 (TCP domain protein 17 )

HSP 1 Score: 136.0 bits (341), Expect = 5.9e-32
Identity = 67/94 (71.28%), Postives = 77/94 (81.91%), Query Frame = 0


Query: 41  EAAASSSSSPWLRLKDPRIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQ 100
           E   SS S    R  +PRIVRVSRAFGGKDRHSKVCT+RGLRDRR+RLSV TAIQ+YDLQ
Sbjct: 6   EDQKSSLSLLTQRWNNPRIVRVSRAFGGKDRHSKVCTVRGLRDRRIRLSVMTAIQVYDLQ 65

Query: 101 DRLGLNQPSKVVDWLLNAAKDEIDELPPLPIPSG 135
           +RLGL+QPSKV+DWLL  AK+++D LPPL  P G
Sbjct: 66  ERLGLSQPSKVIDWLLEVAKNDVDLLPPLQFPPG 99

[Close]

BLAST of MS014590 vs. TAIR 10
Match: AT1G30210.1 (TEOSINTE BRANCHED 1, cycloidea, and PCF family 24 )

HSP 1 Score: 111.7 bits (278), Expect = 1.2e-24
Identity = 70/160 (43.75%), Postives = 90/160 (56.25%), Query Frame = 0


Query: 58  RIVRVSRAFGGKDRHSKVCTIRGLRDRRVRLSVSTAIQLYDLQDRLGLNQPSKVVDWLLN 117
           RI+RVSRA GGKDRHSKV T +GLRDRR+RLSV+TAIQ YDLQDRLG +QPSK V+WL+N
Sbjct: 40  RIIRVSRASGGKDRHSKVLTSKGLRDRRIRLSVATAIQFYDLQDRLGFDQPSKAVEWLIN 99

Query: 118 AAKDEIDELPPL------------PIPSGTTLGLNFQSMLAHTNSYGSEFKINPRDEGEE 177
           AA D I +LP L               S  + G +  S+L+ +    +E +   R+   E
Sbjct: 100 AASDSITDLPLLNTNFDHLDQNQNQTKSACSSGTSESSLLSLSR---TEIRGKARERARE 159

Query: 178 ERQHKNDTPNSSHPPSFSALLNNVVANGNAPFGYHWEPSN 206
                 D    +   SF+ LL           G+  +PSN
Sbjct: 160 RTAKDRDKDLQNAHSSFTQLLTG---------GFDQQPSN 187

The following BLAST results are available for this feature:

BLAST of MS014590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022158507.1	1.9e-189	99.13	transcription factor TCP13-like [Momordica charantia]	[more]
XP_022980679.1	2.6e-82	58.64	transcription factor TCP17-like isoform X1 [Cucurbita maxima]	[more]
XP_022980680.1	4.5e-82	58.12	transcription factor TCP17-like isoform X2 [Cucurbita maxima]	[more]
XP_023527017.1	1.3e-81	59.15	transcription factor TCP17-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023527016.1	2.2e-81	58.64	transcription factor TCP17-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS014590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7W5	4.1e-38	41.87	Transcription factor TCP13 OS=Arabidopsis thaliana OX=3702 GN=TCP13 PE=1 SV=1	[more]
Q9FME3	1.5e-32	60.16	Transcription factor TCP5 OS=Arabidopsis thaliana OX=3702 GN=TCP5 PE=1 SV=1	[more]
Q9LEZ9	8.3e-31	71.28	Transcription factor TCP17 OS=Arabidopsis thaliana OX=3702 GN=TCP17 PE=1 SV=1	[more]
Q9C758	1.7e-23	43.75	Transcription factor TCP24 OS=Arabidopsis thaliana OX=3702 GN=TCP24 PE=1 SV=1	[more]
Q93V43	2.2e-23	75.00	Transcription factor TCP2 OS=Arabidopsis thaliana OX=3702 GN=TCP2 PE=1 SV=1	[more]

BLAST of MS014590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DXE9	9.1e-190	99.13	transcription factor TCP13-like OS=Momordica charantia OX=3673 GN=LOC111024981 P...	[more]
A0A6J1IZY4	1.3e-82	58.64	transcription factor TCP17-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1IX73	2.2e-82	58.12	transcription factor TCP17-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]
A0A6J1GWB2	1.8e-81	59.21	transcription factor TCP17-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1GV58	4.1e-81	58.69	transcription factor TCP17-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]

BLAST of MS014590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02150.2	2.9e-39	41.87	plastid transcription factor 1	[more]
AT3G02150.1	2.3e-36	42.51	plastid transcription factor 1	[more]
AT5G60970.1	1.1e-33	60.16	TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5	[more]
AT5G08070.1	5.9e-32	71.28	TCP domain protein 17	[more]
AT1G30210.1	1.2e-24	43.75	TEOSINTE BRANCHED 1, cycloidea, and PCF family 24	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 68..167 e-value: 4.2E-28 score: 98.8
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 68..126 score: 30.671406
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..35
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..173
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 324..345
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..184
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..48
None	No IPR available	PANTHER	PTHR31072:SF147	TRANSCRIPTION FACTOR TCP2-LIKE	coord: 11..161 coord: 166..339
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 11..161
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 166..339

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014590.1	MS014590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003700	DNA-binding transcription factor activity