MS014527 (gene) Bitter gourd (TR) v1

Overview


Name	MS014527
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribosome biogenesis protein WDR12 homolog
Location	scaffold553: 624877 .. 629711 (-)
RNA-Seq Expression	MS014527
Synteny	MS014527

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACATCGACGGGGTTTCGGAGGACACCTCTCGGCGAGTTCAAGTGCGGTTTATCACGAAACTCAAGGCTCCTTTCAAGGTTCCGACGAACGCCATTGCCATTCCCTCTAACCTCACCAGACTGGGTCTTTCCACCGTTGTTAACAATCTTATTCTAGCCGGTATGTTCTTTTATCGCGTCTAAAATGTCGTCTGGTTATTTGCTGTTTCACTGGAACTATGTTTCGTTGCTCCGTATTGACTTGTTTTATTGAAACTAATGGATAGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTTCTAATTGATGGCGAGCTGGTCAGAATGTCGCTGGAGCAATTCCTTCTTGCTAAGGGAATCTCGGCGGTAATAGTTAAATTGTTGTTATCAATGTTTGGTTCCTATGTTGTGTGGAGAGGAAATCGGAAGCTTTTGAACGCTTACAATATATAGTTTATTTATTTAGAATATCTTCAGTTGAATATCCAATATGACCCAAGTTAGAGATCTGGGAGGTTTTATTATTGTCTCTTTTTCTTTGAATTTTTAGTGTTCTTCCTGAACTGTCGTTTTGGCATAAAATAGGAGAAAACGTTGGAGATTGAGTATATTAAGGCTGTTGCCCCACGAAAGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTAGATGGGTCTTGTCCTGGGTAAGCATTTGAATGCAACATCTACTTTATTATAGTCATCTATGATTCTATATCACCTGCATTTTGGGTTTTTTTTTTTAGTTTAGCGACCCTGCTTCAATTTATTGTCCCTGTGAGTTTTTTAAGATTTAGTGGTTGGTTGGTATCTTATGAATGCTTTTAGAATTTTCTTCCGTTCCTGTATGTTGAACTACTCTACTATTGGCTTGTCTTGGATGCCCTGTAAGGGTGTTTGGCTGTCTGTTACATAGAACACTTTGAATTGTTTTATTGTGCAATCTGATGACATGGTTTGGGTTACCATGTATTTGGGATCATTGTTACAAGCTCGTGATTCTTTTAAAGAACAATTTAAATTCTTTTAAATAGACCATCTGTCTAACAAAGTTAAATTTTAGAAACACAGTTATCAAAACATAGTGTTACATGTTTTGTCAATGAAAAGCAGTTTTAGGCTCAACTTTTAAAGTCTCTTTGTGGTCATTGAGTAATAACGGGTGTCAATTTTCTACCTCTGGGATTACCTTATCCCAAATATCAATGATAAAGATTGATACAATGAGGCATTTTATTTGTAAGCCAGTGTATTTTATTGCTGCATGTAGCAAGTTTCAGCGTGGTGTAATTTATTGAATGTGCATATTAGCTGTTACTGCTGTATAATCTTTTCAGTAGTAACAGCTAATATGCCTATTGCCTATCCATTAAACTGTTATTGCTGTATGCCTGTATCATTACAATTAGGATTTGAATTAGTTTGTAGGCATATCTTTTTAAATGAAGTAATTTAATTTTGCTTCTTCTGTTTGCATGTCAAAATAGCAACGGAAACTAATATAATTTGAACTTGTGTTTGCTCATATTTTTCAGGTTCATTTTGACAGGTTGCTATGATGGCTTAGGAAGGTAAACTTAAGTTTTTTTTTTTTAATACTCGAAGAAACCCATAAACTGTTGTCTTTCTTACTATTTTTTCTTGAATAGTGAACACGGATTGTTATCTAAAAACATCTACTATTGTTCCATAGGGTTTGGGAATCTGCCGGATTGTGTACACATATACTTGAAGGTCATAGCGATGCCATATCATCCGTCTGTATTGTGAACCCTGAAGGTATTTACCAAACTTACCATCTCCTATAACACGATCAACATTGAACAATGTTGTGCCAGTTGTTATAGTTGATAATTTTATTTTATCTTTTCTATATCAAGCTTGTAGTTTTTTCTTGTGAGCTCCTGGTATTAGATTAATATATTTTGATATATTGGAAACTTTATATCACTTTCTGTTTGAGAAACTTGTCTACATGCTGAAGCACTTCAACGTTCCGAGGTAACCTTTAGCCCAAATTTTTTCTCTGAAAGTTGCCCTAGGAAATCCTTATATCTGGATTTCTACGTTCTCGTGCATGCATGCTGTTTACCATTAGATATACATATACTATAAAGTTTTTTTCCATTTTAGGAACGTTCAATCTTTGGGTTTAGGACCTTGTGGCCCTAAGCTATCTTTGACTTGCTAGCTAAATACTAGTCTTTGTCTAATTTATATTTATTGTTTTATTGAAACATGGTTCTCTAATTCAAGTTTGAATCTTATATCGATACTGGTTTATTTACTTCTTGACCATGCTAATACAGAAGCTGCTAGTGTCACTCTCGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGGTAATTTTTTGAAGAAGTACTTGTTTAATATTGGACCTATGTGATTGATGATTTAACAAAATAATTTTTCCTGTTTCCACTTGGAAGTATTCAAAAGACAAGTCTGCTAGCAACCCTACCAAGATAAGGGCATTCAAAATCTTGAAAGGACACGGATTATCTGTCCAAAGTGTTGCATCACAGACGTCTGGAGACCTGGTATGATTATGTTCTTGTTGCTGTGTTGTGTATATTATATGTTCCAATTCAAAGTGAAAGTTACAACGGTCTACTCACAAGTTTGCTCATATTATTTGATCTTTTATTATGTAATTTAGATCTGTTCAGGTTCTTGGGATTGCACAATCAATTTATGGCAAACAGATGAACCTCAATCTGAAGGTGATGTTGTCTCCATCAAGAGGAGAAAAAAGAATGACCAGGCTGAAGAATCTCAGTTAGAGGTAAAGCATAGTTTTTGTTCTTTTTGGTTAATTAGAGTTGACAACATGTCTTATCCAAAAAATTAGACTAGACAACATGTGACTATTTCAAGTGGGATCATGCATTATGGAAATGAACCTTTAACACAAGGAATGCCTCGACCCCCAGTTAACATTGGGGCCCATAAAAAATTAAAGAGGCTTGGAACGAATAAGTTCAAACCATGGTGATCGCCTATCTAAAATTTTCAATCTTACGAGTTTCTTTGGTAATCAAATATCGTAGGGTTAGCGGTTGTCCGATGAGATTAGTTGAGTCATGCATGCAAGCTGGCATGGATGCTCACACACACACACATATAGGAATGCCTGAGCACCTGTTAAATATTAATTTTCAATTAGTTTGGTGTTTGGATGGTTAGAATGAATCGCTCCATGACCAGAATTCTCACTTTGCACCCTGCTTTTTATCTTTCTATGATATTATAATTTGAGCCTTGTTGCCTTTATCGGAGCTTTCTAAAAATTAACTCTTTCTGTTGTTACCAACCAATTCTTATGCTGCCTGGTGCGTGACTATTAATAGACATTTCTTTTTTTTGGATAGGAAACAAATTTCATATTGAGGGTTTTTAATTTTTGGTCATGAAATCTTAAACCGTTTCAACTTTCATAGCAACTCACTCTGTTCTCTATTCTCTCTCTTTGTCTTCTTCTTCTTTTCTTTTAGTTACACATATATATAAGAAGGTTTCTTATCTTCTGCTTTTTGTTTCTTTCCCTTAATTTTTTCTCATATTTTTGTTTAATAATGTAGCTTATGTCTCTATATAAAACATCTAACAGGGCACCTCTGTTGCTACGCTTGTTGGCCACACACAATGTGTATCGTCAGTTGCTTGGCCGAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTCAATATTGTATGCTCGCCAACTCTTTCCATGTTCCTCTTCATGCATATGTTTATGAAATAGAATTTAATTTTGATGTTGAAGTTCTTGTTTTACATGACATGGACGTCCGTAGGAAGTTATGCATTCTCCATTTCCATGAAATTTTGTGTAAAATCCAACTTTTATGGAAATATAGCCCAGAAAGCATGTTCTCTTGAGGAAAGACATTAAACAGTTACTAACTTGTCAGTTTGTTTGCTTTTATGGAATGAAACTATTAGCAGTAGTAAAGGAAACTTGACAATTGAATGTTCTTTGGGATTAAATAGATATAAAATTACCTAAAGTTCCACACTTCTCTGAATTACTATCTTATGTCTTCAAATTCATTCATCCAAATGAAATATGGATCCATTCATTAGAAAAATTGTCTCCATTGACAGTTTTGTGGTAAGGCACTCAGCTGCCTCGATATCGGAGGTGAGGGCTCCACTCTCATTGCTGCCGGTGGCTCAGACCCCACCATTAGAATATGGGATCCTCGTAAACCAGGTATACAGAACGGGAAATGGGCTGCATCCTCTAGAAACACTTCTGTATCTAATAATGTGATATTTTTGTAGGAACTTCTGGTCCTGTCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAGCTTGCAAGTGGCATGATAGATCTTGGTTCCATTTGCTGTCTGCATCATATGATGGGAAAGCTATGCTGTGGGATCTGAGAACTGCGGTACTCGAATATTCTCGCGCTCTATTGTTTGTTCTAATTTTGAATGTATAACACCTGACCAAAAAAATTGTTTTGTTCATCTTACAGTGGCCTTTAGCTGTAATTGACTCTCACAAAGACAAGGTACCCCATTTTGTTCCTTCCTCGCCAACATAGCCTTTGCCCTTTGGAACCTTGTTTCATTATGTTTGCAAATTTCAGGTACTGTCAGCTGACTGGTGGAAAGGTGACAATGTTATCAGTGGCGGGGCGGACTCGAGACTGTGCATTTCGTCTGGGATTTATGTGCCG

mRNA sequence

ATGGACATCGACGGGGTTTCGGAGGACACCTCTCGGCGAGTTCAAGTGCGGTTTATCACGAAACTCAAGGCTCCTTTCAAGGTTCCGACGAACGCCATTGCCATTCCCTCTAACCTCACCAGACTGGGTCTTTCCACCGTTGTTAACAATCTTATTCTAGCCGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTTCTAATTGATGGCGAGCTGGTCAGAATGTCGCTGGAGCAATTCCTTCTTGCTAAGGGAATCTCGGCGGAGAAAACGTTGGAGATTGAGTATATTAAGGCTGTTGCCCCACGAAAGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTAGATGGGTCTTGTCCTGGGTTCATTTTGACAGGTTGCTATGATGGCTTAGGAAGGGTTTGGGAATCTGCCGGATTGTGTACACATATACTTGAAGGTCATAGCGATGCCATATCATCCGTCTGTATTGTGAACCCTGAAGAAGCTGCTAGTGTCACTCTCGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGTATTCAAAAGACAAGTCTGCTAGCAACCCTACCAAGATAAGGGCATTCAAAATCTTGAAAGGACACGGATTATCTGTCCAAAGTGTTGCATCACAGACGTCTGGAGACCTGATCTGTTCAGGTTCTTGGGATTGCACAATCAATTTATGGCAAACAGATGAACCTCAATCTGAAGGTGATGTTGTCTCCATCAAGAGGAGAAAAAAGAATGACCAGGCTGAAGAATCTCAGTTAGAGGGCACCTCTGTTGCTACGCTTGTTGGCCACACACAATGTGTATCGTCAGTTGCTTGGCCGAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTCAATATTTTTTGTGGTAAGGCACTCAGCTGCCTCGATATCGGAGGTGAGGGCTCCACTCTCATTGCTGCCGGTGGCTCAGACCCCACCATTAGAATATGGGATCCTCGTAAACCAGGAACTTCTGGTCCTGTCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAGCTTGCAAGTGGCATGATAGATCTTGGTTCCATTTGCTGTCTGCATCATATGATGGGAAAGCTATGCTGTGGGATCTGAGAACTGCGTGGCCTTTAGCTGTAATTGACTCTCACAAAGACAAGGTACTGTCAGCTGACTGGTGGAAAGGTGACAATGTTATCAGTGGCGGGGCGGACTCGAGACTGTGCATTTCGTCTGGGATTTATGTGCCG

Coding sequence (CDS)

ATGGACATCGACGGGGTTTCGGAGGACACCTCTCGGCGAGTTCAAGTGCGGTTTATCACGAAACTCAAGGCTCCTTTCAAGGTTCCGACGAACGCCATTGCCATTCCCTCTAACCTCACCAGACTGGGTCTTTCCACCGTTGTTAACAATCTTATTCTAGCCGGGAACCCTGAGTGGGAAGCAGAACCATTTGATTTTCTAATTGATGGCGAGCTGGTCAGAATGTCGCTGGAGCAATTCCTTCTTGCTAAGGGAATCTCGGCGGAGAAAACGTTGGAGATTGAGTATATTAAGGCTGTTGCCCCACGAAAGGAGGAAGAGCCTTCTGTTCATGATGATTGGGTCAGTGCAGTAGATGGGTCTTGTCCTGGGTTCATTTTGACAGGTTGCTATGATGGCTTAGGAAGGGTTTGGGAATCTGCCGGATTGTGTACACATATACTTGAAGGTCATAGCGATGCCATATCATCCGTCTGTATTGTGAACCCTGAAGAAGCTGCTAGTGTCACTCTCGCCACTGCTTCAAAGGATCGAACACTCAGGCTGTGGAAGTATTCAAAAGACAAGTCTGCTAGCAACCCTACCAAGATAAGGGCATTCAAAATCTTGAAAGGACACGGATTATCTGTCCAAAGTGTTGCATCACAGACGTCTGGAGACCTGATCTGTTCAGGTTCTTGGGATTGCACAATCAATTTATGGCAAACAGATGAACCTCAATCTGAAGGTGATGTTGTCTCCATCAAGAGGAGAAAAAAGAATGACCAGGCTGAAGAATCTCAGTTAGAGGGCACCTCTGTTGCTACGCTTGTTGGCCACACACAATGTGTATCGTCAGTTGCTTGGCCGAAGCATGGAGAAATTTATTCAGCATCGTGGGACCATTCTGTAAGAAGATGGGATGTCGAGACAGGCAAAGATTTGTTCAATATTTTTTGTGGTAAGGCACTCAGCTGCCTCGATATCGGAGGTGAGGGCTCCACTCTCATTGCTGCCGGTGGCTCAGACCCCACCATTAGAATATGGGATCCTCGTAAACCAGGAACTTCTGGTCCTGTCTTTCAGTTCTTGTCCCATAGTTCTTGGGTTTCAGCTTGCAAGTGGCATGATAGATCTTGGTTCCATTTGCTGTCTGCATCATATGATGGGAAAGCTATGCTGTGGGATCTGAGAACTGCGTGGCCTTTAGCTGTAATTGACTCTCACAAAGACAAGGTACTGTCAGCTGACTGGTGGAAAGGTGACAATGTTATCAGTGGCGGGGCGGACTCGAGACTGTGCATTTCGTCTGGGATTTATGTGCCG

Protein sequence

MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGSCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRWDVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISGGADSRLCISSGIYVP

Homology

[Close]

BLAST of MS014527 vs. NCBI nr
Match: XP_022155078.1 (ribosome biogenesis protein WDR12 homolog [Momordica charantia])

HSP 1 Score: 894.0 bits (2309), Expect = 5.0e-256
Identity = 434/435 (99.77%), Postives = 434/435 (99.77%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE
Sbjct: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ
Sbjct: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW
Sbjct: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS
Sbjct: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG
Sbjct: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420

Query: 421 GADSRLCISSGIYVP 436
           G DSRLCISSGIYVP
Sbjct: 421 GVDSRLCISSGIYVP 435

[Close]

BLAST of MS014527 vs. NCBI nr
Match: XP_023523745.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 802.0 bits (2070), Expect = 2.6e-228
Identity = 386/434 (88.94%), Postives = 407/434 (93.78%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGD VSIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKAL+CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH 
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVLSADWWKGD+V+SG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L IS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of MS014527 vs. NCBI nr
Match: XP_022948382.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita moschata] >KAG7036791.1 Ribosome biogenesis protein WDR12-like protein [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 800.8 bits (2067), Expect = 5.8e-228
Identity = 385/434 (88.71%), Postives = 407/434 (93.78%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGD VSIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKAL+CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH 
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVL+ADWWKGD+V+SG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L IS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of MS014527 vs. NCBI nr
Match: KAG6607101.1 (Ribosome biogenesis protein WDR12-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 800.8 bits (2067), Expect = 5.8e-228
Identity = 385/434 (88.71%), Postives = 407/434 (93.78%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGD VSIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKAL+CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH 
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVL+ADWWKGD+V+SG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L IS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of MS014527 vs. NCBI nr
Match: XP_023525175.1 (ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 798.1 bits (2060), Expect = 3.7e-227
Identity = 384/434 (88.48%), Postives = 406/434 (93.55%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG SED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGGSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGD VSIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKAL+CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH 
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVL+ADWWKGD+V+SG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L IS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of MS014527 vs. ExPASy Swiss-Prot
Match: Q9LF27 (Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR12 PE=1 SV=1)

HSP 1 Score: 689.1 bits (1777), Expect = 3.2e-197
Identity = 321/434 (73.96%), Postives = 379/434 (87.33%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  ED SRR+ V+F+TKL +PFKVP N++AIPSN+TRLGLS++VN++I + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S P FILTGCYDGLGRVW SAG C+HILEGHS AISSV +VN  +A +VT+ATASKDRTL
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RL+K+   +S  + TK+RA+KIL+GH  SVQSV++Q SG+++CS SWDCTINLW T+E  
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEG+ VS+K+RK N+QAEESQ EG +V +LVGHTQCVSSV WP+H  IYS+SWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKD  N+FCGKAL+ +D+GGE S LIAAGGSDP +R+WDPRKPGTS PVFQF SHS
Sbjct: 301 DVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHS 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+SACKWH  SWFHLLSASYDGK MLWDLRTAWPL+VID+H DKVLSADWWKG++V+SG
Sbjct: 361 SWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS L ISSGI +
Sbjct: 421 GADSNLRISSGIAI 432

[Close]

BLAST of MS014527 vs. ExPASy Swiss-Prot
Match: Q8H594 (Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=WDR12 PE=3 SV=1)

HSP 1 Score: 594.0 bits (1530), Expect = 1.4e-168
Identity = 277/438 (63.24%), Postives = 350/438 (79.91%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MD  G S D SR+V+VRF+TKL AP + P  +IA+P++LTR+GLS +VN+L+LA +P+ +
Sbjct: 1   MDSGGAS-DPSRQVRVRFLTKLPAPLRAPPTSIAVPADLTRMGLSEIVNSLLLAASPDHQ 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           A+PFDFL+DGELVR+ L++FLLAKGIS E+ LE+EY+KAVAPRK+E+P  HDDWVSAVDG
Sbjct: 61  AQPFDFLVDGELVRLPLQEFLLAKGISVERVLELEYVKAVAPRKQEDPCPHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAAS-VTLATASKDRT 180
           S P F+LTGCYDGL R+W  A  CTHILEGHSD I+S   +N  E    + + TASKDR+
Sbjct: 121 SNPSFVLTGCYDGLARIWRDASECTHILEGHSDGITSARFINKGETEDRLHVVTASKDRS 180

Query: 181 LRLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEP 240
           LRL+K+  D S S P +I A+KIL+GH  SVQSVA   S ++ICSGSWD +I LW  +  
Sbjct: 181 LRLFKF--DTSVSVPKQIGAYKILRGHTSSVQSVAVDPSTNMICSGSWDNSIKLWSVEGS 240

Query: 241 QSEGDVVSIKRRKKNDQA---EESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHS 300
           + +GD VS+K+R+ N  +   EES  EG++ +T +GHTQCVS+V WP+   IYSASWDHS
Sbjct: 241 EEDGDTVSVKKRRTNSDSSGPEESLFEGSATSTFLGHTQCVSAVTWPERQTIYSASWDHS 300

Query: 301 VRRWDVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQF 360
           VR+WDV+TGK+ +N+  GKAL+CLD GGE S+LIAAGGSDP +R+WDPRKPGT  P+FQF
Sbjct: 301 VRQWDVQTGKETWNMVSGKALNCLDCGGESSSLIAAGGSDPVLRVWDPRKPGTLAPIFQF 360

Query: 361 LSHSSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDN 420
            SH SW+SACKWH  SWFHL+S+S+DGK MLWDLRTAWPLA ++SHKDKVL ADWWKGD+
Sbjct: 361 SSHKSWISACKWHPSSWFHLVSSSFDGKVMLWDLRTAWPLASVESHKDKVLCADWWKGDS 420

Query: 421 VISGGADSRLCISSGIYV 435
           VISGGADS+LCI+SGI +
Sbjct: 421 VISGGADSKLCIASGIEI 435

[Close]

BLAST of MS014527 vs. ExPASy Swiss-Prot
Match: A8IR43 (Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 GN=CHLREDRAFT_128420 PE=3 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 2.3e-78
Identity = 170/450 (37.78%), Postives = 244/450 (54.22%), Query Frame = 0


Query: 6   VSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFD 65
           ++E+T  +V V+F+TKL A  +VP   +A+PS+L R GLS ++N+L+    P     PFD
Sbjct: 1   MAEET--QVLVKFVTKLPAHLRVPETPVAVPSDLKRYGLSQIINHLLALDPP----RPFD 60

Query: 66  FLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGS-C-- 125
           FLIDGELVR SLEQ LLA  +SAE TLE+EY+ AV P +++  + HDDWVS+VDGS C  
Sbjct: 61  FLIDGELVRKSLEQHLLAHNLSAESTLEVEYVPAVVPPQQKNSTPHDDWVSSVDGSRCAP 120

Query: 126 --------PGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATA 185
                    G +++G YDGL R+W         +  H+  ++  C+    ++    L T+
Sbjct: 121 ASSSGGSPSGVVVSGSYDGLLRLWNGDLEAVASVSAHAGGVN--CVRFLPKSQGDLLLTS 180

Query: 186 SKDRTLRLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLW 245
            KDR +++W+ S  +        R     +GH   V++VA+  SG    S  WD  + +W
Sbjct: 181 GKDRLVKMWQLSSSEEEDAGPSCRLVATYRGHEDGVEAVAASPSGRRFASCGWDGKLLVW 240

Query: 246 QTDEP--QSEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSAS 305
           +  E    + G   + K+++K   A  S   G   A L GH  CVSSVAWP    ++S  
Sbjct: 241 EGGEQLRWAAGTAEASKKKRKTGTANGSAAAGAGGADLRGHLHCVSSVAWPAENSLFSGG 300

Query: 306 WDHSVRRWDVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPR-KPGTSG 365
           WDHSVRRWDV +G         KA+ C+        L+A G SD  +R+WD R K G+  
Sbjct: 301 WDHSVRRWDVSSGAAADTYNGSKAVLCIASHAASPALVAFGCSDRALRLWDTRGKAGSDA 360

Query: 366 -PVFQFLSHSSWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSAD 425
             V    +H  WV+A  W   S  H+ SAS+DG   +WD+RT  PL ++  H DKVL+  
Sbjct: 361 LAVTTQGAHGGWVTAVAWCPSSQHHIASASHDGTIKMWDIRTQIPLGMLSHHTDKVLALG 420

Query: 426 WWKG------DNVISGGADSRLCISSGIYV 435
           W  G        ++SGGAD +L +    Y+
Sbjct: 421 WLGGAEAGHARGLVSGGADCQLRMYESDYI 442

[Close]

BLAST of MS014527 vs. ExPASy Swiss-Prot
Match: Q6NX08 (Ribosome biogenesis protein wdr12 OS=Danio rerio OX=7955 GN=wdr12 PE=2 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 7.4e-69
Identity = 146/415 (35.18%), Postives = 226/415 (54.46%), Query Frame = 0


Query: 13  RVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFDFLIDGEL 72
           ++Q RF T+ K  + V     +IP++     LS V+N L+ A N   +   FDFL+ G+ 
Sbjct: 3   QLQARFFTENK-KYLVDDVPFSIPASSEVADLSGVINKLLEAKNAGHKHVEFDFLVRGQF 62

Query: 73  VRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGSCPGFILTGCYD 132
           +R SL++ +  + IS E+ +EIEY++     + EE  +HDDW+S+V+     +ILTG YD
Sbjct: 63  LRTSLDKHIETENISTEEVVEIEYVEKFTAPQPEECIMHDDWISSVEADSE-WILTGSYD 122

Query: 133 GLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSAS 192
              R+W   G     + GH+D +  V  V  +   SV L TAS D+T+ LW+++ +++  
Sbjct: 123 KTARIWSMEGKAVMTVAGHADVVKDVAWVKRDGLNSV-LLTASLDQTVMLWEWNSERN-- 182

Query: 193 NPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRK 252
              K++A    +GH  SV ++A   +    CSGSWD  + +W     + E ++    R +
Sbjct: 183 ---KVKARHCCRGHAGSVDTIAVDPTRTKFCSGSWDKMLKIWSAVPTEEEDEIEEPNRPR 242

Query: 253 KNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRWDVETGKDLFNIF 312
           K  + E+  L  T + TL GH + VSSV W    E+ SASWDH++R WD ETG     + 
Sbjct: 243 KKQKTEQMGLTRTPLMTLSGHNEAVSSVLWMDADELCSASWDHTIRLWDAETGGQKSTLS 302

Query: 313 CGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWHDRS 372
             K  +C+        L A+G +D  +R+WDPR    S  +    SH+ WV+A +W    
Sbjct: 303 GSKVFNCISYSPLCRRL-ASGSTDRHVRLWDPRSKDGSLVLLSLTSHNGWVTAVRWAPSH 362

Query: 373 WFHLLSASYDGKAMLWDLRTA-WPLAVIDSHKDKVLSADWWKGDNVISGGADSRL 427
              L+S S D    LWD R+   PL  + +H+DKVL ADW +   ++SGGAD++L
Sbjct: 363 EHQLVSGSLDNVVKLWDTRSCKAPLYDLAAHEDKVLCADWTENGLILSGGADNKL 408

[Close]

BLAST of MS014527 vs. ExPASy Swiss-Prot
Match: Q5BJ90 (Ribosome biogenesis protein wdr12 OS=Xenopus tropicalis OX=8364 GN=wdr12 PE=2 SV=1)

HSP 1 Score: 261.2 bits (666), Expect = 2.2e-68
Identity = 150/417 (35.97%), Postives = 233/417 (55.88%), Query Frame = 0


Query: 13  RVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWEAEPFDFLIDGEL 72
           ++Q RF T+ +  +KV     +IP+    + LS ++N L+   N + +   FDFL+  + 
Sbjct: 3   QIQARFFTE-EEKYKVDDVPFSIPATSEIVDLSNLINKLLETKNGDHKPVEFDFLVKSQF 62

Query: 73  VRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDGSCPGFILTGCYD 132
           +RM L + + A+GIS E  +EIEY++ +   + EE  +HDDWVS++ G+   +ILTG YD
Sbjct: 63  LRMPLIKHMEAEGISTEVVVEIEYVEKITAPQPEECMMHDDWVSSIAGT-EEWILTGSYD 122

Query: 133 GLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSAS 192
              R+W   G     + GH++A+  V  V  +++ S  L +AS D+T++LW+++ +++  
Sbjct: 123 KTCRIWSLEGKTIMTITGHTEAVKDVTWVK-KDSLSCLLLSASIDQTIQLWEWNTERN-- 182

Query: 193 NPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQT--DEPQSEGDVVSIKR 252
              KI+A    +GH  SV S+A   S    CSGSWD  + +W     E + E +  S + 
Sbjct: 183 ---KIKALHCCRGHAGSVDSIAVDASRTKFCSGSWDKMLKIWSAVPSEEEDEYEETSDRP 242

Query: 253 RKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRWDVETGKDLFN 312
           RKK  + E+  L    + TL GH++ VSSV W    EI SASWDH+++ WDVETG     
Sbjct: 243 RKK-QKTEKMGLTRIPIVTLSGHSEAVSSVLWSDVDEICSASWDHNIKIWDVETGTVKST 302

Query: 313 IFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWHD 372
           +   K  +C+      S  +A+G +D  IR+WDPR    S  +    SH+ WV++ KW  
Sbjct: 303 LAGNKVFNCISY-SPLSQRLASGSTDRHIRLWDPRSKDGSLVLCSLTSHTGWVTSVKWSP 362

Query: 373 RSWFHLLSASYDGKAMLWDLRTA-WPLAVIDSHKDKVLSADWWKGDNVISGGADSRL 427
                L+S S D    LWD R+   PL  + +H DKVLS DW     ++SGG+D++L
Sbjct: 363 SHEQQLVSGSLDKLVKLWDTRSCKAPLYDLAAHSDKVLSVDWTDAGLILSGGSDNKL 409

[Close]

BLAST of MS014527 vs. ExPASy TrEMBL
Match: A0A6J1DM12 (Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC111022210 PE=3 SV=1)

HSP 1 Score: 894.0 bits (2309), Expect = 2.4e-256
Identity = 434/435 (99.77%), Postives = 434/435 (99.77%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE
Sbjct: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ
Sbjct: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW
Sbjct: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS
Sbjct: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG
Sbjct: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420

Query: 421 GADSRLCISSGIYVP 436
           G DSRLCISSGIYVP
Sbjct: 421 GVDSRLCISSGIYVP 435

[Close]

BLAST of MS014527 vs. ExPASy TrEMBL
Match: A0A6J1G934 (Ribosome biogenesis protein WDR12 homolog OS=Cucurbita moschata OX=3662 GN=LOC111452076 PE=3 SV=1)

HSP 1 Score: 800.8 bits (2067), Expect = 2.8e-228
Identity = 385/434 (88.71%), Postives = 407/434 (93.78%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDGVSED+SRR+QVRFITKLKAP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDIDGVSEDSSRRIQVRFITKLKAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWESAGLCTHILEGH DAISSVC+VNPEEAASVTLATASKDRTL
Sbjct: 121 SHSGFILTGCYDGLGRVWESAGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGD VSIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 SEGD-VSIKKRRKNDQVEESQLEGNSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKAL+CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH 
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVL+ADWWKGD+V+SG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLAADWWKGDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L IS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of MS014527 vs. ExPASy TrEMBL
Match: A0A6J1KCJ3 (Ribosome biogenesis protein WDR12 homolog OS=Cucurbita maxima OX=3661 GN=LOC111492637 PE=3 SV=1)

HSP 1 Score: 791.2 bits (2042), Expect = 2.2e-225
Identity = 380/434 (87.56%), Postives = 405/434 (93.32%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MD+DGVSED+SRR+QVRFITKL AP +VPTNAIAIPSNLTRLGLSTVVNNL+LAGNPEWE
Sbjct: 1   MDMDGVSEDSSRRIQVRFITKLMAPCRVPTNAIAIPSNLTRLGLSTVVNNLLLAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
           AEPFDFLIDGE VRMSLEQFLLAKGISAEK LEIEYIKAV PR+EEEPSVHDDWVSAVDG
Sbjct: 61  AEPFDFLIDGEFVRMSLEQFLLAKGISAEKVLEIEYIKAVVPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S  GFILTGCYDGLGRVWES+GLCTHILEGH DAISSVC+VNPEEAASVTLATASKD+TL
Sbjct: 121 SHSGFILTGCYDGLGRVWESSGLCTHILEGHKDAISSVCVVNPEEAASVTLATASKDQTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD   SNPTKIR FKILKGH LSVQSVASQ SGDLICSGSWDCTINLWQTDE  
Sbjct: 181 RLWKYSKDDRDSNPTKIRPFKILKGHRLSVQSVASQKSGDLICSGSWDCTINLWQTDETH 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
            EG+ VSIK+R+KNDQ EESQLEG SVATLVGHTQCVS+V WP+HGEIYSASWDHS+RRW
Sbjct: 241 FEGN-VSIKKRRKNDQVEESQLEGDSVATLVGHTQCVSAVVWPQHGEIYSASWDHSIRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKDLFNIFCGKAL+CLD+GGEGSTLIAAGGSDPT+RIWDPRKPGTS P+FQFLSH 
Sbjct: 301 DVETGKDLFNIFCGKALNCLDVGGEGSTLIAAGGSDPTVRIWDPRKPGTSSPIFQFLSHK 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+S+CKWHD+S FHLLSASYDGK  LWDLRTAWPLAVIDSHKDKVLSADWWKGD+V+SG
Sbjct: 361 SWISSCKWHDKSSFHLLSASYDGKVRLWDLRTAWPLAVIDSHKDKVLSADWWKGDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L IS GI V
Sbjct: 421 GADSKLRISLGICV 433

[Close]

BLAST of MS014527 vs. ExPASy TrEMBL
Match: A0A1S3B4A1 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC103486017 PE=3 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 6.2e-220
Identity = 377/434 (86.87%), Postives = 398/434 (91.71%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  EDTSRR+QVRFITKLKAPFKVP NAIAIPSNLTRLGLSTVVNNL+ AGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGELVRMSLE+FLLAKGISAEKTLEIEY KAVAPR+EEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP EA +VTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPGEATNVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD    NPTK+R FKILKGH LSVQSVASQ SG LICSGSWD TI LW+TDE Q
Sbjct: 181 RLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHLICSGSWDHTIKLWRTDEHQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGD VSIK+RK N++AEESQLE  SVATL GH+Q VSSVAWPKH EIYS SWDHSVR+W
Sbjct: 241 SEGD-VSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAWPKHEEIYSVSWDHSVRKW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETG  LFN  CGKAL+CLDIGGEGS+LIAAGGSDPTIRIWDPRKPGTS P+FQF SH+
Sbjct: 301 DVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIWDPRKPGTSSPIFQFSSHT 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SWVSACKWH++SWFHLLSASYDGK MLWDLRTAWPLAVIDSHKDKVLSADWWK D+V+SG
Sbjct: 361 SWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLSADWWKDDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L ISSGIYV
Sbjct: 421 GADSKLHISSGIYV 433

[Close]

BLAST of MS014527 vs. ExPASy TrEMBL
Match: A0A5D3C4N3 (Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G00050 PE=3 SV=1)

HSP 1 Score: 773.1 bits (1995), Expect = 6.2e-220
Identity = 377/434 (86.87%), Postives = 398/434 (91.71%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  EDTSRR+QVRFITKLKAPFKVP NAIAIPSNLTRLGLSTVVNNL+ AGNPEWE
Sbjct: 1   MDIDGDFEDTSRRIQVRFITKLKAPFKVPANAIAIPSNLTRLGLSTVVNNLLSAGNPEWE 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGELVRMSLE+FLLAKGISAEKTLEIEY KAVAPR+EEEPSVHDDWVSAVDG
Sbjct: 61  EEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFKAVAPRREEEPSVHDDWVSAVDG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNP EA +VTLATASKDRTL
Sbjct: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPGEATNVTLATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RLWKYSKD    NPTK+R FKILKGH LSVQSVASQ SG LICSGSWD TI LW+TDE Q
Sbjct: 181 RLWKYSKDDRVKNPTKLRPFKILKGHRLSVQSVASQKSGHLICSGSWDHTIKLWRTDEHQ 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEGD VSIK+RK N++AEESQLE  SVATL GH+Q VSSVAWPKH EIYS SWDHSVR+W
Sbjct: 241 SEGD-VSIKKRKMNNKAEESQLEEDSVATLDGHSQSVSSVAWPKHEEIYSVSWDHSVRKW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETG  LFN  CGKAL+CLDIGGEGS+LIAAGGSDPTIRIWDPRKPGTS P+FQF SH+
Sbjct: 301 DVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGSDPTIRIWDPRKPGTSSPIFQFSSHT 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SWVSACKWH++SWFHLLSASYDGK MLWDLRTAWPLAVIDSHKDKVLSADWWK D+V+SG
Sbjct: 361 SWVSACKWHEKSWFHLLSASYDGKVMLWDLRTAWPLAVIDSHKDKVLSADWWKDDSVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS+L ISSGIYV
Sbjct: 421 GADSKLHISSGIYV 433

[Close]

BLAST of MS014527 vs. TAIR 10
Match: AT5G15550.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 689.1 bits (1777), Expect = 2.3e-198
Identity = 321/434 (73.96%), Postives = 379/434 (87.33%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  ED SRR+ V+F+TKL +PFKVP N++AIPSN+TRLGLS++VN++I + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S P FILTGCYDGLGRVW SAG C+HILEGHS AISSV +VN  +A +VT+ATASKDRTL
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RL+K+   +S  + TK+RA+KIL+GH  SVQSV++Q SG+++CS SWDCTINLW T+E  
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEG+ VS+K+RK N+QAEESQ EG +V +LVGHTQCVSSV WP+H  IYS+SWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKD  N+FCGKAL+ +D+GGE S LIAAGGSDP +R+WDPRKPGTS PVFQF SHS
Sbjct: 301 DVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHS 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTAWPLAVIDSHKDKVLSADWWKGDNVISG 420
           SW+SACKWH  SWFHLLSASYDGK MLWDLRTAWPL+VID+H DKVLSADWWKG++V+SG
Sbjct: 361 SWISACKWHKSSWFHLLSASYDGKIMLWDLRTAWPLSVIDTHNDKVLSADWWKGESVVSG 420

Query: 421 GADSRLCISSGIYV 435
           GADS L ISSGI +
Sbjct: 421 GADSNLRISSGIAI 432

[Close]

BLAST of MS014527 vs. TAIR 10
Match: AT5G15550.2 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 620.2 bits (1598), Expect = 1.3e-177
Identity = 290/393 (73.79%), Postives = 342/393 (87.02%), Query Frame = 0


Query: 1   MDIDGVSEDTSRRVQVRFITKLKAPFKVPTNAIAIPSNLTRLGLSTVVNNLILAGNPEWE 60
           MDIDG  ED SRR+ V+F+TKL +PFKVP N++AIPSN+TRLGLS++VN++I + NPEW+
Sbjct: 1   MDIDG--EDVSRRLHVKFVTKLDSPFKVPVNSVAIPSNVTRLGLSSIVNSIIESENPEWK 60

Query: 61  AEPFDFLIDGELVRMSLEQFLLAKGISAEKTLEIEYIKAVAPRKEEEPSVHDDWVSAVDG 120
            EPFDFLIDGEL+RMSLE+FLLAKGISAE+TLEIEYI+AV PRKEEEPS+HDDWVSAV+G
Sbjct: 61  TEPFDFLIDGELIRMSLEEFLLAKGISAERTLEIEYIRAVTPRKEEEPSLHDDWVSAVNG 120

Query: 121 SCPGFILTGCYDGLGRVWESAGLCTHILEGHSDAISSVCIVNPEEAASVTLATASKDRTL 180
           S P FILTGCYDGLGRVW SAG C+HILEGHS AISSV +VN  +A +VT+ATASKDRTL
Sbjct: 121 SSPRFILTGCYDGLGRVWSSAGSCSHILEGHSGAISSVALVNSNDAETVTVATASKDRTL 180

Query: 181 RLWKYSKDKSASNPTKIRAFKILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQ 240
           RL+K+   +S  + TK+RA+KIL+GH  SVQSV++Q SG+++CS SWDCTINLW T+E  
Sbjct: 181 RLFKFDPAESVDSTTKVRAYKILRGHKASVQSVSAQKSGNMVCSSSWDCTINLWNTNEST 240

Query: 241 SEGDVVSIKRRKKNDQAEESQLEGTSVATLVGHTQCVSSVAWPKHGEIYSASWDHSVRRW 300
           SEG+ VS+K+RK N+QAEESQ EG +V +LVGHTQCVSSV WP+H  IYS+SWDHSVRRW
Sbjct: 241 SEGESVSVKKRKGNNQAEESQSEGEAVTSLVGHTQCVSSVVWPEHDVIYSSSWDHSVRRW 300

Query: 301 DVETGKDLFNIFCGKALSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHS 360
           DVETGKD  N+FCGKAL+ +D+GGE S LIAAGGSDP +R+WDPRKPGTS PVFQF SHS
Sbjct: 301 DVETGKDSLNLFCGKALNTVDVGGESSALIAAGGSDPILRVWDPRKPGTSAPVFQFSSHS 360

Query: 361 SWVSACKWHDRSWFHLLSASYDGKAMLWDLRTA 394
           SW+SACKWH  SWFHLLSASYDGK MLWDLRTA
Sbjct: 361 SWISACKWHKSSWFHLLSASYDGKIMLWDLRTA 391

[Close]

BLAST of MS014527 vs. TAIR 10
Match: AT2G43770.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 82.8 bits (203), Expect = 7.5e-16
Identity = 65/234 (27.78%), Postives = 100/234 (42.74%), Query Frame = 0


Query: 202 ILKGHGLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRKKNDQAEESQ 261
           +L GH  +V ++    +G LI SGS D  I LW+       GD                 
Sbjct: 48  LLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRV-----HGDC---------------- 107

Query: 262 LEGTSVATLVGHTQCVSSVAWPKHG-EIYSASWDHSVRRWDVETGKDLFNIFCGKAL--S 321
               +   L GH   +  + W   G +I SAS D +VR WDVETGK +  +    +   S
Sbjct: 108 ---KNFMVLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVETGKQIKKMAEHSSFVNS 167

Query: 322 CLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSWVSACKWHDRSWFHLLS 381
           C      G  LI +G  D T ++WD R+ G      Q       ++A  + D +   + +
Sbjct: 168 CCPT-RRGPPLIISGSDDGTAKLWDMRQRG----AIQTFPDKYQITAVSFSDAA-DKIFT 227

Query: 382 ASYDGKAMLWDLRTAWPLAVIDSHKDKV----LSADWWKGDNVISGGADSRLCI 429
              D    +WDLR       ++ H+D +    LS D   G  +++ G D++LC+
Sbjct: 228 GGVDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPD---GSYLLTNGMDNKLCV 248

[Close]

BLAST of MS014527 vs. TAIR 10
Match: AT3G18130.1 (receptor for activated C kinase 1C )

HSP 1 Score: 79.0 bits (193), Expect = 1.1e-14
Identity = 72/270 (26.67%), Postives = 124/270 (45.93%), Query Frame = 0


Query: 147 ILEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSASNPTKIRAFKILKGH 206
           I+  H+D +++  I  P + + + + TAS+D+++ LWK +KD  +    + R    L GH
Sbjct: 10  IMRAHTDIVTA--IATPIDNSDI-IVTASRDKSIILWKLTKDDKSYGVAQRR----LTGH 69

Query: 207 GLSVQSVASQTSGDLICSGSWDCTINLWQTDEPQS-------EGDVVSIKRRKKNDQAEE 266
              V+ V   + G    SGSWD  + LW     ++         DV+S+     N Q   
Sbjct: 70  SHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVS 129

Query: 267 SQLEGT------------SVATLVGHTQCVSSVAWPKH---GEIYSASWDHSVRRWDVET 326
           +  + T            +++   GH + VS V +  +     I SASWD +V+ W+++ 
Sbjct: 130 ASRDRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQN 189

Query: 327 GKDLFNIFCGKA--LSCLDIGGEGSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFLSHSSW 386
            K L N   G +  L+ + +  +GS L A+GG D  I +WD  +      ++   + S  
Sbjct: 190 CK-LRNSLVGHSGYLNTVAVSPDGS-LCASGGKDGVILLWDLAE---GKKLYSLEAGSII 249

Query: 387 VSACKWHDRSWFHLLSASYDGKAMLWDLRT 393
            S C   +R W   L A+ +    +WDL +
Sbjct: 250 HSLCFSPNRYW---LCAATENSIRIWDLES 264

[Close]

BLAST of MS014527 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 76.6 bits (187), Expect = 5.3e-14
Identity = 80/285 (28.07%), Postives = 119/285 (41.75%), Query Frame = 0


Query: 148 LEGHSDAISSVCIVNPEEAASVTLATASKDRTLRLWKYSKDKSASNPTKIRAFKILKGHG 207
           LEGH+ AIS V   N        LA+AS D+T+ LW      SA+N + I  +   +GH 
Sbjct: 39  LEGHTAAISCVKFSNDGN----LLASASVDKTMILW------SATNYSLIHRY---EGHS 98

Query: 208 LSVQSVASQTSGDLICSGSWDCTINLWQTDEPQSEGDVVSIKRRKKNDQAEESQLEGTSV 267
             +  +A  +     CS S DCT+ +W    P                           +
Sbjct: 99  SGISDLAWSSDSHYTCSASDDCTLRIWDARSPYE------------------------CL 158

Query: 268 ATLVGHTQCVSSVAW-PKHGEIYSASWDHSVRRWDVETGKDLFNIFC-GKALSCLDIGGE 327
             L GHT  V  V + P    I S S+D ++R W+V+TGK +  I      +S +    +
Sbjct: 159 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRD 218

Query: 328 GSTLIAAGGSDPTIRIWDPRKPGTSGPVFQFL--SHSSWVSACKWHDRSWFHLLSASYDG 387
           GS LI +   D + +IWD ++    G   + L    S  VS  K+     F +L A+ D 
Sbjct: 219 GS-LIVSASHDGSCKIWDAKE----GTCLKTLIDDKSPAVSFAKFSPNGKF-ILVATLDS 278

Query: 388 KAMLWDLRTAWPLAVIDSHKDKVL----SADWWKGDNVISGGADS 425
              L +  T   L V   H +KV     +     G  ++SG  D+
Sbjct: 279 TLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIVSGSEDN 280

The following BLAST results are available for this feature:

BLAST of MS014527 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022155078.1	5.0e-256	99.77	ribosome biogenesis protein WDR12 homolog [Momordica charantia]	[more]
XP_023523745.1	2.6e-228	88.94	ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022948382.1	5.8e-228	88.71	ribosome biogenesis protein WDR12 homolog [Cucurbita moschata] >KAG7036791.1 Rib...	[more]
KAG6607101.1	5.8e-228	88.71	Ribosome biogenesis protein WDR12-like protein, partial [Cucurbita argyrosperma ...	[more]
XP_023525175.1	3.7e-227	88.48	ribosome biogenesis protein WDR12 homolog [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS014527 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LF27	3.2e-197	73.96	Ribosome biogenesis protein WDR12 homolog OS=Arabidopsis thaliana OX=3702 GN=WDR...	[more]
Q8H594	1.4e-168	63.24	Ribosome biogenesis protein WDR12 homolog OS=Oryza sativa subsp. japonica OX=399...	[more]
A8IR43	2.3e-78	37.78	Ribosome biogenesis protein WDR12 homolog OS=Chlamydomonas reinhardtii OX=3055 G...	[more]
Q6NX08	7.4e-69	35.18	Ribosome biogenesis protein wdr12 OS=Danio rerio OX=7955 GN=wdr12 PE=2 SV=1	[more]
Q5BJ90	2.2e-68	35.97	Ribosome biogenesis protein wdr12 OS=Xenopus tropicalis OX=8364 GN=wdr12 PE=2 SV...	[more]

BLAST of MS014527 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DM12	2.4e-256	99.77	Ribosome biogenesis protein WDR12 homolog OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1G934	2.8e-228	88.71	Ribosome biogenesis protein WDR12 homolog OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A6J1KCJ3	2.2e-225	87.56	Ribosome biogenesis protein WDR12 homolog OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A1S3B4A1	6.2e-220	86.87	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo OX=3656 GN=LOC10348601...	[more]
A0A5D3C4N3	6.2e-220	86.87	Ribosome biogenesis protein WDR12 homolog OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of MS014527 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15550.1	2.3e-198	73.96	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G15550.2	1.3e-177	73.79	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G43770.1	7.5e-16	27.78	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G18130.1	1.1e-14	26.67	receptor for activated C kinase 1C	[more]
AT4G02730.1	5.3e-14	28.07	Transducin/WD40 repeat-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 376..390 score: 37.8 coord: 171..185 score: 36.58 coord: 330..344 score: 34.8
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 349..389 e-value: 2.4E-5 score: 33.7 coord: 101..139 e-value: 2.0 score: 15.1 coord: 263..301 e-value: 3.1E-6 score: 36.7 coord: 141..184 e-value: 0.0011 score: 28.2 coord: 196..235 e-value: 2.3E-4 score: 30.5 coord: 304..343 e-value: 0.24 score: 20.5 coord: 392..430 e-value: 1.3 score: 16.2
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 144..184 e-value: 8.4E-5 score: 23.3 coord: 266..301 e-value: 0.0017 score: 19.1 coord: 318..343 e-value: 0.0089 score: 16.9 coord: 201..234 e-value: 9.1E-6 score: 26.3
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 148..193 score: 10.374778
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 203..244 score: 10.842632
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 270..310 score: 11.07656
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 356..398 score: 9.271977
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 329..343 score: 8.603614
IPR012972	NLE	PFAM	PF08154	NLE	coord: 14..81 e-value: 2.1E-18 score: 66.5
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 104..434 e-value: 1.9E-68 score: 232.8
None	No IPR available	PANTHER	PTHR19855:SF11	RIBOSOME BIOGENESIS PROTEIN WDR12	coord: 9..431
None	No IPR available	PANTHER	PTHR19855	WD40 REPEAT PROTEIN 12, 37	coord: 9..431
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 203..235 score: 9.019239
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 270..306 score: 8.676514
None	No IPR available	CDD	cd00200	WD40	coord: 111..426 e-value: 1.00639E-44 score: 155.571
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 376..390
IPR028599	WD repeat WDR12/Ytm1	HAMAP	MF_03029	WDR12	coord: 8..433 score: 30.65967
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 108..428

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014527.1	MS014527.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0042254	ribosome biogenesis
molecular_function	GO:0005515	protein binding