MS014496 (gene) Bitter gourd (TR) v1

Overview


Name	MS014496
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	lamin-like protein
Location	scaffold553: 397115 .. 398354 (-)
RNA-Seq Expression	MS014496
Synteny	MS014496

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGCTGAGGCGACGGTGGGTCGGCGCTGCGGCGGCGTTGGGGGCGGTGCTGCTGGCGTTGGCGGCGGTGCCGGAAGTGTCGGCGACGCGGTGGACTGTGGGGGGAAACATGGGGTGGACGACCAATTTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTATTATGATGACTGGCTCTGTAAGCACTTTTGTCTCTAGATCTGCCTTTGAGCTACATTTACAGCTGATTTTTTTCAGATCTCATGAAGATTTTTGCCGAATGTTTCAGTTCTGCTGAGTTTGGTTTTGTGGGTTTCAATGTGGGATTTAGTCCTTTAACTTGAATTGAGTTTCTGGGTCTGTTTGGTTGCTGAGAAAATTTGTGTGGGATTTTGACAAATGGGGGAAAAGAGAAAGGAGAGAGTATGAGTTGTTTCAAGATTTTCCCAAGGAGGAACTTAAGGAATTTTCTGTTTGGATTGTGTCTAGGATTCCGACAAAGATTTGGAATCTAGATTTGGCACTGAACTTGGCATTTTCTTTGCAAACCAACACTGGTTTTTTGAACCTGCTTTGTTCTTAGAGACAGGTCTCAATTCCCACCGAGCTAAGCTCACGTTAGCGGAAGATATACTTTGTTGGTAGAGATATTAGCTTACATATCAATTAGTCTTTTAGGTTGTTTGCAATTATATTCTCGTAAATCTCTCTTGTTCTGACGTGATATCGATCCATCCATCCATGCATCTCTTTGCTTACATAATTGAGTGTTAGAGTTTATGGCTTTTGAGTACGGCTTGTCTTGTATCATTCTCTCAGTTTCCTTCGGTTATTCCTTGATGGCAAATATCATGGCCTGTTTTCGACATTTAATCGGAATTAGTTTCGGGTTCGGGTTAGGGCTGACTTGGTGTGGTTGTTGTTGTTCCCCATCCCCTTAGTTTTTGTGTACGACAGGAACCAAATGAATGTGTTGGAAGTGAACAAAACAGACTATGAGAGCTGCAATTCAGATCACCCACTCCACAACTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGGCCCTATTACTTCATCAGTGGCAAGGGCTTCTGCTATGGAGGCATGAAGCTCGCCATCCACGTCGAACACCTACCGCCCCCGCCCTCCGCCTCCGTCTCCGACATGAAGAGCACTGCCCCAATGTCCACTCCGGTCCCCCACACCGCGCTCGTTTTAACTGCTCTTCTCGCCCTC

mRNA sequence

ATGGAGGCGCTGAGGCGACGGTGGGTCGGCGCTGCGGCGGCGTTGGGGGCGGTGCTGCTGGCGTTGGCGGCGGTGCCGGAAGTGTCGGCGACGCGGTGGACTGTGGGGGGAAACATGGGGTGGACGACCAATTTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGAATGTGTTGGAAGTGAACAAAACAGACTATGAGAGCTGCAATTCAGATCACCCACTCCACAACTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGGCCCTATTACTTCATCAGTGGCAAGGGCTTCTGCTATGGAGGCATGAAGCTCGCCATCCACGTCGAACACCTACCGCCCCCGCCCTCCGCCTCCGTCTCCGACATGAAGAGCACTGCCCCAATGTCCACTCCGGTCCCCCACACCGCGCTCGTTTTAACTGCTCTTCTCGCCCTC

Coding sequence (CDS)

ATGGAGGCGCTGAGGCGACGGTGGGTCGGCGCTGCGGCGGCGTTGGGGGCGGTGCTGCTGGCGTTGGCGGCGGTGCCGGAAGTGTCGGCGACGCGGTGGACTGTGGGGGGAAACATGGGGTGGACGACCAATTTCAACTACACTATCTGGGCTCAGGGGAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTACGACAGGAACCAAATGAATGTGTTGGAAGTGAACAAAACAGACTATGAGAGCTGCAATTCAGATCACCCACTCCACAACTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTCACCAGGCCCTATTACTTCATCAGTGGCAAGGGCTTCTGCTATGGAGGCATGAAGCTCGCCATCCACGTCGAACACCTACCGCCCCCGCCCTCCGCCTCCGTCTCCGACATGAAGAGCACTGCCCCAATGTCCACTCCGGTCCCCCACACCGCGCTCGTTTTAACTGCTCTTCTCGCCCTC

Protein sequence

MEALRRRWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL

Homology

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BLAST of MS014496 vs. NCBI nr
Match: XP_022144407.1 (lamin-like protein [Momordica charantia])

HSP 1 Score: 334.7 bits (857), Expect = 4.5e-88
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MEALRRRWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD 60
           MEALRRRWVGAAAAL AVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD
Sbjct: 15  MEALRRRWVGAAAALVAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD 74

Query: 61  WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 75  WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY 134

Query: 121 GGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           GGMKLAIHVEHLPPPPS SVSDMKSTAPMSTPVPHTALVLTALLAL
Sbjct: 135 GGMKLAIHVEHLPPPPSXSVSDMKSTAPMSTPVPHTALVLTALLAL 180

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BLAST of MS014496 vs. NCBI nr
Match: XP_038903389.1 (lamin-like protein [Benincasa hispida])

HSP 1 Score: 266.2 bits (679), Expect = 1.9e-67
Identity = 131/166 (78.92%), Postives = 142/166 (85.54%), Query Frame = 0


Query: 1   MEALRRRWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD 60
           ME LRR   G      AV++ LAAVPEVSATRWTVGGNMGWTTN NYTIWAQ KHFYYDD
Sbjct: 1   MEVLRRVDGGGLLVAVAVVVLLAAVPEVSATRWTVGGNMGWTTNVNYTIWAQDKHFYYDD 60

Query: 61  WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTDYE+C SDHPLHN+TTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 61  WLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 120

Query: 121 GGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           GGMKLAIHVEHLPPPPS+S  + KS+A  ST + HT  +LTA+ A+
Sbjct: 121 GGMKLAIHVEHLPPPPSSSPLNEKSSALRSTYISHTPFILTAVFAI 166

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BLAST of MS014496 vs. NCBI nr
Match: XP_004136682.1 (lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319 [Cucumis sativus])

HSP 1 Score: 263.8 bits (673), Expect = 9.7e-67
Identity = 131/168 (77.98%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MEALRRRWVGAA--AALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYY 60
           ME LR R  G+    A+ AV++ LAAVPEVSATRWTVGGNMGW TN NYT WAQGKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKTDYE+C SDHPLHN+TTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           C+GGMKLAIHVEHLPPPPS+S  + KS+A  ST   HT  VLTA+ A+
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAI 168

[Close]

BLAST of MS014496 vs. NCBI nr
Match: XP_008443359.1 (PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [Cucumis melo var. makuwa] >TYK25602.1 lamin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 261.9 bits (668), Expect = 3.7e-66
Identity = 131/169 (77.51%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 1   MEALRRRWVGA---AAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFY 60
           ME LR R  G+    A   AV++ LA+VPEVSATRWTVGGNMGWTTN NY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE+C SDHPLHN+TTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           FCYGGMKLAIHVEHLPPPPSA   + KS+A  ST   HT  VLTA+ A+
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAI 169

[Close]

BLAST of MS014496 vs. NCBI nr
Match: XP_022935116.1 (lamin-like protein [Cucurbita moschata])

HSP 1 Score: 257.7 bits (657), Expect = 6.9e-65
Identity = 124/166 (74.70%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MEALRRRWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD 60
           M+ L  R  G    + A ++ L A+PEVSATRWTVGG MGWTTN NYTIWA+GKHFYYDD
Sbjct: 31  MQVLTTRVGGVGLLVAAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 90

Query: 61  WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKT+YE+CNSD PLHN+TTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 91  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 150

Query: 121 GGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           GGMKLAIHV HLPPPPSAS  + KS+A  S+ + HT  VLTA+ A+
Sbjct: 151 GGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAI 196

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BLAST of MS014496 vs. ExPASy Swiss-Prot
Match: Q39131 (Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1)

HSP 1 Score: 170.6 bits (431), Expect = 1.5e-41
Identity = 82/142 (57.75%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 7   RWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVY 66
           R+     A+    L  A +P V+A ++TVG N  W  N NYTIWAQGKHFY  DWL+FV+
Sbjct: 3   RFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVF 62

Query: 67  DRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLA 126
           DRNQ N+LEVNKTDYE C +DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL+
Sbjct: 63  DRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLS 122

Query: 127 IHVEHLPPPP-SASVSDMKSTA 148
           + VE LPPPP SA V ++ S +
Sbjct: 123 VKVEKLPPPPKSAPVKNIGSVS 144

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BLAST of MS014496 vs. ExPASy Swiss-Prot
Match: Q96316 (Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.9e-13
Identity = 51/137 (37.23%), Postives = 71/137 (51.82%), Query Frame = 0


Query: 17  AVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEV 76
           A+LL LAAVP V A  + VG   GWT+N +YT+W  GK F   D L FVY  +  +V  V
Sbjct: 8   ALLLFLAAVPAVFAATFKVGDISGWTSNLDYTVWLTGKTFRVGDTLEFVYGLSH-SVSVV 67

Query: 77  NKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIHVEHLPPP 136
           +K  Y++C+S     N+  G  +  + L      +F+    G C  GMKLA+ V    P 
Sbjct: 68  DKAGYDNCDSSGATQNFADGDTK--IDLTTVGTMHFLCPTFGHCKNGMKLAVPVLAAAPS 127

Query: 137 PSASVSDMKSTAPMSTP 153
           PS   S   + +  S+P
Sbjct: 128 PSTPSSPPSTPSTPSSP 141

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BLAST of MS014496 vs. ExPASy Swiss-Prot
Match: Q9SK27 (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 74.7 bits (182), Expect = 1.1e-12
Identity = 54/142 (38.03%), Postives = 75/142 (52.82%), Query Frame = 0


Query: 19  LLALAAVPEVSATRWTVGGNMG-W----TTNFNYTIWAQGKHFYYDDWLFFVYDRNQMNV 78
           L +LAA  EV     TVGG  G W    ++++++T WAQ   F   D++ F Y+  + +V
Sbjct: 22  LFSLAAANEV-----TVGGKSGDWKIPPSSSYSFTEWAQKARFKVGDFIVFRYESGKDSV 81

Query: 79  LEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAI----- 138
           LEV K  Y SCN+ +PL NYT G  +  V L+ + P+YFISG  G C  G KL++     
Sbjct: 82  LEVTKEAYNSCNTTNPLANYTDGETK--VKLDRSGPFYFISGANGHCEKGQKLSLVVISP 141

Query: 139 -HVEHLPPPPSASVSDMKSTAP 149
            H    P P      D  + AP
Sbjct: 142 RHSVISPAPSPVEFEDGPALAP 156

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BLAST of MS014496 vs. ExPASy Swiss-Prot
Match: A0A072U307 (Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-10
Identity = 48/137 (35.04%), Postives = 70/137 (51.09%), Query Frame = 0


Query: 17  AVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEV 76
           ++ + L +   ++AT + VG + GWT +F+YT WAQ K F   D L F YD ++ NV +V
Sbjct: 11  SISMVLLSSVAIAATDYIVGDDKGWTVDFDYTQWAQDKVFRVGDNLVFNYDPSRHNVFKV 70

Query: 77  NKTDYESCNSDHPLHNYTTGAGRDVVHLNVT-RPYYFISGKGFCYG-GMKLAIHV--EHL 136
           N T ++SC    P  N     G+D++ L    R +Y       C    MKL I V  E  
Sbjct: 71  NGTLFQSCT--FPPKNEALSTGKDIIQLKTEGRKWYVCGVADHCSARQMKLVITVLAEGA 130

Query: 137 P---PPPSASVSDMKST 147
           P   PPPS+    + S+
Sbjct: 131 PAPSPPPSSDAHSVVSS 145

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BLAST of MS014496 vs. ExPASy Swiss-Prot
Match: Q9T076 (Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.3e-10
Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 0


Query: 18  VLLALAAVPEVS-ATRWTVGGNMGWTTN--FNYTIWAQGKHFYYDDWLFFVYDRNQMNVL 77
           +LL+L+ +  +S A ++ VGG+  W TN   NY  W+    F   D L+F Y +   +VL
Sbjct: 15  ILLSLSTLFTISNARKFNVGGSGAWVTNPPENYESWSGKNRFLVHDTLYFSYAKGADSVL 74

Query: 78  EVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISG-KGFCYGGMKLAIHVEHLP 137
           EVNK DY++CN+ +P+     G     + L+   P+YFISG +  C  G KL + V    
Sbjct: 75  EVNKADYDACNTKNPIKRVDDGDSE--ISLDRYGPFYFISGNEDNCKKGQKLNVVVISAR 134

Query: 138 PPPSASVSDMKSTAPMSTP 153
            P +A  S   +    STP
Sbjct: 135 IPSTAQ-SPHAAAPGSSTP 150

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BLAST of MS014496 vs. ExPASy TrEMBL
Match: A0A6J1CTL5 (lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111014101 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.2e-88
Identity = 164/166 (98.80%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MEALRRRWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD 60
           MEALRRRWVGAAAAL AVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD
Sbjct: 15  MEALRRRWVGAAAALVAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD 74

Query: 61  WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 75  WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY 134

Query: 121 GGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           GGMKLAIHVEHLPPPPS SVSDMKSTAPMSTPVPHTALVLTALLAL
Sbjct: 135 GGMKLAIHVEHLPPPPSXSVSDMKSTAPMSTPVPHTALVLTALLAL 180

[Close]

BLAST of MS014496 vs. ExPASy TrEMBL
Match: A0A0A0LC11 (Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220 PE=4 SV=1)

HSP 1 Score: 263.8 bits (673), Expect = 4.7e-67
Identity = 131/168 (77.98%), Postives = 143/168 (85.12%), Query Frame = 0


Query: 1   MEALRRRWVGAA--AALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYY 60
           ME LR R  G+    A+ AV++ LAAVPEVSATRWTVGGNMGW TN NYT WAQGKHFYY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAVVILLAAVPEVSATRWTVGGNMGWNTNVNYTTWAQGKHFYY 60

Query: 61  DDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGF 120
           DDWLFFVYDRNQMNVLEVNKTDYE+C SDHPLHN+TTGAGRDVVHLNVTRPYYFISGKGF
Sbjct: 61  DDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKGF 120

Query: 121 CYGGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           C+GGMKLAIHVEHLPPPPS+S  + KS+A  ST   HT  VLTA+ A+
Sbjct: 121 CFGGMKLAIHVEHLPPPPSSSPLNEKSSALRSTNTGHTPFVLTAVFAI 168

[Close]

BLAST of MS014496 vs. ExPASy TrEMBL
Match: A0A5D3DPZ3 (Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G007610 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66
Identity = 131/169 (77.51%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 1   MEALRRRWVGA---AAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFY 60
           ME LR R  G+    A   AV++ LA+VPEVSATRWTVGGNMGWTTN NY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE+C SDHPLHN+TTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           FCYGGMKLAIHVEHLPPPPSA   + KS+A  ST   HT  VLTA+ A+
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAI 169

[Close]

BLAST of MS014496 vs. ExPASy TrEMBL
Match: A0A1S3B7D2 (lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.8e-66
Identity = 131/169 (77.51%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 1   MEALRRRWVGA---AAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFY 60
           ME LR R  G+    A   AV++ LA+VPEVSATRWTVGGNMGWTTN NY+ WAQGKHFY
Sbjct: 1   MEVLRTRVGGSGLLVAVAAAVVVLLASVPEVSATRWTVGGNMGWTTNVNYSTWAQGKHFY 60

Query: 61  YDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKG 120
           YDDWLFFVYDRNQMNVLEVNKTDYE+C SDHPLHN+TTGAGRDVVHLNVTRPYYFISGKG
Sbjct: 61  YDDWLFFVYDRNQMNVLEVNKTDYENCISDHPLHNFTTGAGRDVVHLNVTRPYYFISGKG 120

Query: 121 FCYGGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           FCYGGMKLAIHVEHLPPPPSA   + KS+A  ST   HT  VLTA+ A+
Sbjct: 121 FCYGGMKLAIHVEHLPPPPSALPMNEKSSALRSTYTGHTPFVLTAVFAI 169

[Close]

BLAST of MS014496 vs. ExPASy TrEMBL
Match: A0A6J1F3N0 (lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1)

HSP 1 Score: 257.7 bits (657), Expect = 3.4e-65
Identity = 124/166 (74.70%), Postives = 139/166 (83.73%), Query Frame = 0


Query: 1   MEALRRRWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDD 60
           M+ L  R  G    + A ++ L A+PEVSATRWTVGG MGWTTN NYTIWA+GKHFYYDD
Sbjct: 31  MQVLTTRVGGVGLLVAAAVVMLTAMPEVSATRWTVGGKMGWTTNVNYTIWAEGKHFYYDD 90

Query: 61  WLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCY 120
           WLFFVYDRNQMNVLEVNKT+YE+CNSD PLHN+TTGAGRDVVHLNVTRPYYFISGKGFCY
Sbjct: 91  WLFFVYDRNQMNVLEVNKTEYENCNSDQPLHNFTTGAGRDVVHLNVTRPYYFISGKGFCY 150

Query: 121 GGMKLAIHVEHLPPPPSASVSDMKSTAPMSTPVPHTALVLTALLAL 167
           GGMKLAIHV HLPPPPSAS  + KS+A  S+ + HT  VLTA+ A+
Sbjct: 151 GGMKLAIHVRHLPPPPSASPFNAKSSALRSSYIGHTPFVLTAVFAI 196

[Close]

BLAST of MS014496 vs. TAIR 10
Match: AT3G01070.1 (early nodulin-like protein 16 )

HSP 1 Score: 171.0 bits (432), Expect = 8.0e-43
Identity = 83/130 (63.85%), Postives = 98/130 (75.38%), Query Frame = 0


Query: 11  AAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVYDRNQ 70
           A    GAVL  L A   V+A RWTVG N  W  N NYTIWAQ KHFY DDWL+FVY+RNQ
Sbjct: 5   AVLVAGAVLAFLLAATNVTAKRWTVGDNKFWNPNINYTIWAQDKHFYLDDWLYFVYERNQ 64

Query: 71  MNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGK-GFCYGGMKLAIHV 130
            NV+EVN+T+Y SCN ++P+ N++ GAGRD+VHLNVTR YY ISG  G CYGGMKLA+ V
Sbjct: 65  YNVIEVNETNYISCNPNNPIANWSRGAGRDLVHLNVTRHYYLISGNGGGCYGGMKLAVLV 124

Query: 131 EHLPPPPSAS 140
           E  PPPP+A+
Sbjct: 125 EKPPPPPAAA 134

[Close]

BLAST of MS014496 vs. TAIR 10
Match: AT5G15350.1 (early nodulin-like protein 17 )

HSP 1 Score: 170.6 bits (431), Expect = 1.0e-42
Identity = 82/142 (57.75%), Postives = 102/142 (71.83%), Query Frame = 0


Query: 7   RWVGAAAALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVY 66
           R+     A+    L  A +P V+A ++TVG N  W  N NYTIWAQGKHFY  DWL+FV+
Sbjct: 3   RFTVLITAVVLAFLMAAPMPGVTAKKYTVGENKFWNPNINYTIWAQGKHFYLGDWLYFVF 62

Query: 67  DRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLA 126
           DRNQ N+LEVNKTDYE C +DHP+ N+T GAGRD+V LN T+ YY + GKG CYGGMKL+
Sbjct: 63  DRNQHNILEVNKTDYEGCIADHPIRNWTRGAGRDIVTLNQTKHYYLLDGKGGCYGGMKLS 122

Query: 127 IHVEHLPPPP-SASVSDMKSTA 148
           + VE LPPPP SA V ++ S +
Sbjct: 123 VKVEKLPPPPKSAPVKNIGSVS 144

[Close]

BLAST of MS014496 vs. TAIR 10
Match: AT4G12880.1 (early nodulin-like protein 19 )

HSP 1 Score: 145.6 bits (366), Expect = 3.6e-35
Identity = 68/124 (54.84%), Postives = 85/124 (68.55%), Query Frame = 0


Query: 13  AALGAVLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVYDRNQMN 72
           +A+    L  A +PEV+A ++ VG    W  N NYT+WAQGKHFY  DWL+FV+ R+Q N
Sbjct: 9   SAVVLAFLVAAPIPEVTAKKYLVGDKKFWNPNINYTLWAQGKHFYVGDWLYFVFYRDQHN 68

Query: 73  VLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHL 132
           +LEVNK DYE C S+ P+ NYT GAGRD+V L  TR YY + G+G C  GMKL + VE  
Sbjct: 69  ILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDGRGGCVQGMKLDVLVETP 128

Query: 133 PPPP 137
           PPPP
Sbjct: 129 PPPP 132

[Close]

BLAST of MS014496 vs. TAIR 10
Match: AT2G27035.1 (early nodulin-like protein 20 )

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-23
Identity = 60/144 (41.67%), Postives = 85/144 (59.03%), Query Frame = 0


Query: 18  VLLALAAVPEVSATRWTVGGNMGWTTNFNYTIWAQGKHFYYDDWLFFVYDRNQMNVLEVN 77
           V++ +  V   S+     GG   W ++ N++ WA  + FY  DWL+F ++R + N+L+VN
Sbjct: 14  VMILIIVVEVESSLHRVGGGRYTWNSDVNFSDWANHQRFYSGDWLYFGFNRTRHNILQVN 73

Query: 78  KTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCYGGMKLAIHVEHLP-PPP 137
           K+ YE C  +  + N T G GRDV  L   +PYYFI G+G+C  GMKLAI V  LP PPP
Sbjct: 74  KSSYEQCVDNDYIFNITRG-GRDVFQLLEPKPYYFICGRGYCLKGMKLAITV--LPQPPP 133

Query: 138 SASVSDMKSTAPMSTPVPHTALVL 161
           SA  +   +T P+  P   TA +L
Sbjct: 134 SAPTNFTSTTTPLIPPNAITAAIL 154

[Close]

BLAST of MS014496 vs. TAIR 10
Match: AT4G12880.2 (early nodulin-like protein 19 )

HSP 1 Score: 94.7 bits (234), Expect = 7.2e-20
Identity = 45/81 (55.56%), Postives = 57/81 (70.37%), Query Frame = 0


Query: 56  FYYDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISG 115
           F+++  L FV+ R+Q N+LEVNK DYE C S+ P+ NYT GAGRD+V L  TR YY + G
Sbjct: 14  FFFNFSLNFVFYRDQHNILEVNKADYEKCISNRPIRNYTRGAGRDIVPLYETRRYYLLDG 73

Query: 116 KGFCYGGMKLAIHVEHLPPPP 137
           +G C  GMKL + VE  PPPP
Sbjct: 74  RGGCVQGMKLDVLVETPPPPP 94

The following BLAST results are available for this feature:

BLAST of MS014496 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144407.1	4.5e-88	98.80	lamin-like protein [Momordica charantia]	[more]
XP_038903389.1	1.9e-67	78.92	lamin-like protein [Benincasa hispida]	[more]
XP_004136682.1	9.7e-67	77.98	lamin-like protein [Cucumis sativus] >KGN59525.1 hypothetical protein Csa_001319...	[more]
XP_008443359.1	3.7e-66	77.51	PREDICTED: lamin-like protein [Cucumis melo] >KAA0053799.1 lamin-like protein [C...	[more]
XP_022935116.1	6.9e-65	74.70	lamin-like protein [Cucurbita moschata]	[more]

BLAST of MS014496 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q39131	1.5e-41	57.75	Lamin-like protein OS=Arabidopsis thaliana OX=3702 GN=At5g15350 PE=2 SV=1	[more]
Q96316	4.9e-13	37.23	Uclacyanin-3 OS=Arabidopsis thaliana OX=3702 GN=UCC3 PE=2 SV=1	[more]
Q9SK27	1.1e-12	38.03	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]
A0A072U307	1.3e-10	35.04	Blue copper protein 1b OS=Medicago truncatula OX=3880 GN=BCP1B PE=2 SV=1	[more]
Q9T076	2.3e-10	35.25	Early nodulin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=At4g27520 PE=1 S...	[more]

BLAST of MS014496 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTL5	2.2e-88	98.80	lamin-like protein OS=Momordica charantia OX=3673 GN=LOC111014101 PE=4 SV=1	[more]
A0A0A0LC11	4.7e-67	77.98	Phytocyanin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_3G824220...	[more]
A0A5D3DPZ3	1.8e-66	77.51	Lamin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G0...	[more]
A0A1S3B7D2	1.8e-66	77.51	lamin-like protein OS=Cucumis melo OX=3656 GN=LOC103486966 PE=4 SV=1	[more]
A0A6J1F3N0	3.4e-65	74.70	lamin-like protein OS=Cucurbita moschata OX=3662 GN=LOC111442083 PE=4 SV=1	[more]

BLAST of MS014496 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01070.1	8.0e-43	63.85	early nodulin-like protein 16	[more]
AT5G15350.1	1.0e-42	57.75	early nodulin-like protein 17	[more]
AT4G12880.1	3.6e-35	54.84	early nodulin-like protein 19	[more]
AT2G27035.1	2.4e-23	41.67	early nodulin-like protein 20	[more]
AT4G12880.2	7.2e-20	55.56	early nodulin-like protein 19	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 41..123 e-value: 5.9E-21 score: 74.3
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 31..131 score: 35.136898
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 29..132 e-value: 2.4E-30 score: 106.8
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 30..129
None	No IPR available	PANTHER	PTHR33021:SF231	LAMIN-LIKE PROTEIN	coord: 12..162
IPR039391	Phytocyanin	PANTHER	PTHR33021	BLUE COPPER PROTEIN	coord: 12..162
IPR006311	Twin-arginine translocation pathway, signal sequence	PROSITE	PS51318	TAT	coord: 1..30 score: 7.926323

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014496.1	MS014496.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0009055	electron transfer activity