MS014485 (gene) Bitter gourd (TR) v1

Overview


Name	MS014485
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	mediator of RNA polymerase II transcription subunit 8 isoform X1
Location	scaffold553: 284876 .. 297559 (+)
RNA-Seq Expression	MS014485
Synteny	MS014485

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGCCATGGACGGGGTGGTGCAGAATCAGCCTCAGCAGCAGCAGCAGCAGCAGCCTCCGCCGCCGCAGCCGGTGGTTGTTGCGGAAAGGCTGAACCAGGCGGTACAGCAACAGCTGAACCTGGAGGCTGTGAAGACTCGAGCTATTACTCTATTCAAAGCCATCTCACGGATCCTCGAAGATTTTGATGTCTATGGTCGCACCAATACAACGCCCAAATGGTCTACTTTCATCTTTTCCATCGCTTTTTCTTGTGATATTTTCCAAATCTACTTGAATTTTAAGTCAGAAAACACTAAATTTGGGACTCGAGGGTGCAATATCTTTTGTTTTGTTTCATTTACACTTCCTAATAGCCCCTTAATGTTAGAATGTAATTTTTTTTTCCTATCATCCATCTGGACTTTCATGTTACTAATTATTTTTCTAAACATCCAAGCATCTTAATATTTATATTTGTTTTCAATTTTCTCTTAAACTTGATAACAATCTAGTTGAGTTCTACACCAGGCAAGACATATTGGGGCAATATTCTATGGTGAATCTCGAGCTCTTCAACATTGTTGACGAAATTAAGAAGGTTTCTAAGGCTTTCGTTGTACATCCAAAGAATGTGAATGCAGAGAATTCGACAAGTATGCAACTGCATCCCTTTCAAGTCTTTGTGTAATAGAAAAAAATGCTAACTTCATGTTTTGTGCGCTTGAAATTGTGTCTTAAAGGCACAACTGGTGGAATAGATTTCCTATAGTTATATGTAGTTGTTTATGCTCTCAAGAAACTGGTGGAATATATGTCTTTGCGTTCACGTGCTTTCACCAAATTTATTCTTATTATTTTTTAAAAAGTATACCCTAAATTAAAGTGTTTACTCTCTGGAAAAACTATTTATCTCTATTCACCACCACCATCCTATGTAAAACCACAGAAAGTTATGAGAATTGAGTCGTTGTTAGATGTCTTCAGATATTTTTTACTATAATATTTCTTTTACTGTAAGAAGGATGATCAGCGTTCAAATAGAAAGATCCAGTTGGGTGCGTGTCATAACTTAGACTTGGTCTCCTGAGGTGAATATTGGGTTGTTTGAGTCATGTTAGTTCAGTGAACTTGCAATCTTGTCCGAGCCAAGGATTTGATAGCTTTATAAGAACATTTGATGGACCCCACCTTGTATGATTTTCTAACTTTAATGCACTTTCTAGCCCTCGTTAGAGGCCTCCAGCCAGGGATTTAATAACTATTTTCCCTTTCATGTGTGTATTTAAATCAATATTAATTGGAGGGTGTTTCTATATTCTCTTTTGGCTTTTGGTGCGGGGATGCCTTATGTTCCCAAACTGATCTTTTAAATTCTTTTTATCTTTTTTTTTGACATGTTTGTTTCTCACCATAAGAGGGAGAAGAAGCATAAGCTATCACGTATACCCTAATTTTATTATCCTTGTAAAGTGAACTACTGTCGAACAGTACTTTAACTATGATGTAAGCTCCTCTATTTGGTTGTTTAGTGCGACACATAAGTATAATTGCTGAAATATCTTGGAAGTACCATGTTGGTGTCTCTTCAATATTATCTGCTTATTTACCACCCTTTTCCAGGTATGGTAGATAGACATATTTTCTTACTCCTTTATTTTATTTTTTGTTTCTTTAATGCTGAAAAGGGTTTACTTACCTAAAATCAGTTTGGTAATTATTGCACAAGCTTGCTCAATTGGTATTTCAAGTGGAAGGGAAATGGGACAATCTTATATTTATTTGTATAATTTTATTAGCAATAAAATTTTCTTCTTTTCTGTGAGCACAGTTCTACCGGTTATGTTGTCCTCAAAATTGTTGCCTGAGATGGAGATAGACGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCAAAACATGCCAATATCTACACAGATTGATAAATTAAAGGTATTAAGTCATTAAATAACTTACTCTTTTTGTGTATCTGATATTTAGATATACCTTTTCCACAGACTAGAATAGAAATGATTGGTGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAGACTCGGAAGGCATATTGTTTTGGAATGCGTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTCACTGCGAGCTGCTGTTAACTTTGGGGAAGGTAATACTTCATTACTTTTATAGCCATTGATTAATATCTTTTTTTTTGTTTTGGTTTTTTTGTAGTTTATACATTGTTTAGTAGTGTATCATGCCTAGTAAATTCACTAATGATTGAGCTATTTACCAAAAATAATACTATATTTAGGCTTCTCGCCAATTTGGTACCATGTATCTATGAAGATTAGAGATTTCTATATATTTTCTTTATTTCTTAATTTGTGATATACTTTATCAAATCTGTGGTGCATACTTGAATATGGATGTTCTGATTCATGTAACATTCATTTTTCTCTCTTATAATTGTTGTATGAATCAAATGCATAGGTAACTTATCTTGTTGGCTTAATGGATTTATATGACAACTGGCAAATTGGTCTGATTCTTGCAAAACAAATGGGTATAAGGTGTTAAAAAGAGTAATTGGTGGTAACCAAAGGTCTTTTTTCTCATAAAGAAATCCTTGTTATGTGCCTATGATTTATGACACTATGTATTTGTCAGTTGCGTTTATAGTTGAGACTTGACTAAAATCTGAAATGTTATTTGCCTTTATATTCCCTACTCCTTTTGTTATGTACAATAGTTGTTCCTTGTGCATGTTACTCATATACACACGTAGGATTATTTACTGGTGAGCAAAGGCAGATTACACCAACACTTCCAATGCATTTGGTAGATGTGCTGAATGTAGGTGATGGAGTACAAAGTTTTAATGAAACGTCAGGTAGTGTTCAATTTCTTCCTCGAGCATGAATGATTTATATATTAATTTACTAAATTGAACTGTTTTCTTTGTTGTTATGGTCAATTTAACGAGATCTCTTTCAGGTATGTATGCAAAGAATACTCCTCTAACATCAAGTAATATTAGTGGTCAAGGATCATTGTTTCAGGTCAGATGATTTCCTTGCTCCTTGAAGTGGTTCCTCAACTTTAATCTATTCGCATCTCCTTTGAGTAATAGAATGTGTTCCAACTATAATAAAGTTGATTTCATTTATTTATTAACCTTTCAATTGCTTGTTAATTATTTTCAAATAGTCAATCTGTAATTAGATACACAAGTTCAATTTAGGATTATGAAACTAGGAAGTCCTGAACTCATGTAAGTGTAAGGTATTCCCTTACAATATGATGTTAAAAAAAAAAAACCCTAGGNGAATTCCCACCCTTACCCTTCCTAGCATAAGTATTTATAATAGGAGGCCTTACACGACACCCGAGACACCCTGTTGGATGGTTGAAATGGCATCCCATGTAGCTTCATGCTCGAGTAAATCCTTCAACTGCACCAATGACTCCCAGTTGTCTGTATTCACGCTCTTGTGCGTCCCCATCACGTTATTCTATTGTAAGGCCTAGTGGTTCCAAGGAAAGCATTAGCAACCACGTTATGCTAGTGGTTCTTCAACGTTATGTTAGTACAAGGCATCCTATTGTAAATAATTATGCTAGGAAGGGTAAGGATGAGAACTCACCTACCAATAGTAGTTGGGAAGGCCCAAGGTGTCGACCAACTTTTGCAATATGAAGTTATGTGTCAGCCCACAATCCACAAGCACAATCACGTTCGTCTGATTTATTTGTCCACGTAGTTTCATGGTTCCTAGGGTAGAGAACTATGAATTGTCCCGCAGCACATTGAAAACCATGGCAAGGTGTTTGAGGTGCGTCTGCAAGTTAGGACCATATACCAGAATATCATCAAAGAATACTAATACGCACCTTCGAAGGAATGGTCTGAAAACGTTGTTCATAAGTGCTTGAAAGGTAGAGGAGCGTTGGTTAGGCCAAACGGCATCACTAGAAATTCATAATGCCCTTCGTGCGTTCTGAAGGTTGTCTTATGGGTATCTTCCTCTGCCATCCTGATCTGGTGGTAGCCGGAACGAAGATCAAGCTTTGAATACACCTTGGATCCATTCAACTCATCAAGTAATTCTTCTACCACCGGTATTGGAAACTTATCGAGGATAGTAGCACTGTTGAGAGCCCTATAGTCTACACAAAAACGCCAGCTGCCATCTTTCTTCTTGACTAAAATCACTGGGCTAGAGAAATGACTCACACTTGGTTTAATGATCCCCGATCCCAACATTTCGTTAATTAGGCTCTCTATTTCCTCTTTCTGAGCATGGGCATACTGGTAAGGTCGGACATTGACTGGGTTTTGCCCTTCCTTCAAAGGGATTCGATGATCCACAGTTCTTTTTGGAGGTAGCTCTTCTGGTTTCTGGAACAAGTCTAGGTATTCATGAATGAGCTCTTCCACTAAAGGGGACAGGGTTTCAGCAACCTCCTCTGTTTCTTCCTCTAATGTGCTCAATGTCCGCAGCTCAACGAGATATCCCTGGTCGTGGTCCTCCCATCCTTTTGCCAGTCTCTTCATCGTCACTTCCAAACGTGCCAAGGTTGGATCGCCACGAATGGTAATCTGTTTTCCTCCTCTATCAAATCTCAGCGTCAACGCCAGCCAGTCGGCCTCCATTTTGCCCATGGTTTGGAGCCACTGCATTCCCAAAACGATGTCTAAGGTCCCCAACACCAAGGGAAGAAAATCCTCTCTAATTGTGAGTTCTGGTAGGGATAAAACAACGCCCTTGCAGATACCGTTGCCCTTCACCGCCGTTCCTGATCCCATTATCACCCCATAGCTCACTGTTTCTGTCTTCGTCAAACTCAATTCGTCTGCCAAAGGTAAGGATATGAAATTGTGGGTGGCTCCACAATCTATCGGCACCACCACCTCTCGCCCTTGGATCGCCCCTTTCACTTTGATCGTTCCTGGTGTGGAGATCCCTACGATCGTATTCAGGTGACATTCGACGATCTTGCCCCCTTTCTCTTCGATTTCTTCTTTCGGTTCCTCCGGTAACTTATCATCTTCCACCTCAAACATTTCTTCGTCGTGCTCTACGAAGACTCGGAGTTCTCTGTTTCGACACTTATGGCCCACGGTGTACTTTTCCTCACAGCGGAAACACAATCCCCGTTCCTTCCTTTTCTGAAACTCAGCCTCTGTTAACTTCTTGAAGGGAGCTTCCTTCTTCGTTGACAGTGATGTTCCTGTTACCTGCGTCGTTAATGGGACCTTACTTGACAGAGTTACCATACGAGTAGGGATTACCTCTAGGGTTTTGGAAACTGTTTTGCTCGTCATTGGGCCAATTTGGGTCTTCTCTGTGGTGTTTTGTCTCGCGGCTTCCAGACTTGCCGTGTTAATGTCGTCGATGAGTTGGGCCTTTCGCACTACTTGATCCAACCCTTTGGGTTCTAGGGCCCTTACTTCCGCGCGCATCACTGGGTCGAGCCCATTCAAGAAAGCGCTTTCTAGCACTTCATTGGAAAGTTGCGGAAGAGCCGCCGCCAGGGCCTCGAACGTCTGTCGGTACTCTATGAACGTGCCCTCCTGTTTGATCGATAATAACTGTGCGCATTGTCTGCCTTCGCTGGTCGGATGGAACTGATCACGTAGTCTCCCTTTGAGGTCGTTCCAGTCGCGGAACTTCTCTCTGTTATCAGTATACCGATACCACGTCAAAGCTATACCATCAAAACTGATGATCGCTACGAGCATCTTCTCATCTTCAGACAACTTCTGGATTTCATAATATCGCTCTGCGCGTAAAATCCATGCCTCCAGCTCCAGACCTGCAAAAACCGGCATCTCAACCTTTTTGAAACGGTTTCAGTCAGTATTCTGATTACCATTCTCTTGTCCTAAGACGTCATCCTCAATCGCCTTCCCCTTTGTCACCGACGTGTCCCCCGTTATCGTCAACACGGATTGTGACTTACCTCCGATGACCTGAGCCATGAACGCCTTTAGCGTCGCGTGAATACACTCACTCAACTTCTGTTCATCAAATTTTTGATGTAACAGTGTAATTTCCACCTTCACTTCTGCTACTTCCTTCTCCACTGCCTCACACCTGGTTTCGAGCTCCTTTACCGTCATTCTCTCTTTTGATTGCCCAGTGTCGACACGCTTTGATACCAATTTGTGAGGTATCAACTTCTCACTATTCCGATTTACTTCCAAAAGATAACCCGAAGGTGATACAAANTGCCCAGTGTCGACACGCTCTGATACCAATTTGTGAGGTATCAACTCCTCACTATTCCGATTTACTTCCAAAAGATAACCCGAAGGTGATACAAAAAGAACAAGAACAGCCCTAAGGCAACAAAAGACCCACCAATCCGAGAGGGTGGGGAATCTCTCCCTAACAGCCCAAAAGCTAACCAACACAAAATGCTAGAATACCCCCCTTAGCCTACATTCCCTTCCCCTTATAGGCAGAACTTCCCTCCTTCCTACAGGTAGCTGGTCCCCCCTCCTTCTCTCTCTTGGCCGTTGTGGCCTTCCTCTCCTAAAAAGACTTCTTTACCCTTTATACTATATGTTTTTACAATTGGAGGCCTAACAAGAACCTAACTACGATGTTCAAAGATGGTTCGACCACCTCGCCGGCATCTTCAGCCGGAGCGGGATTGACCTCCATGTCGGTTGATTTGTTGTCATGGGCGAGGAGAACTTGAAGTTCTTGGCTTTTGCACTTATGCTCATAAGAATACTTTTCGTCACAAGAGAAACATAACACCTTTTCTTTCCGTAGAAGGAATTTCCTCGCAGTCAATTTTTTAAAATTCGTGTCTTTTCAAGGAGTTGGTTTGGTCATGGAAAACGTGGGAGGTGTACTGTTAGGGTTACAGTATGCGTGGGTATGGGATTTGCAATTTTGGGAGGCCATGATATGTGGATGGGCTGATGTGTTGGGGCGGGTCGGGTTTTGGCTCATAGGCGCATAGAGGGAGGTGTGTTTATTCTCTATGAGTGAGTCGCTTTCATCATCCTTTCCAGCCGTATGGCCTCCATACATAGAACTTCAGCCTAATTGTGTGTAGTTTTTTAATGAATGTGCTCTTTAGCACGTCTTCTGTCAACCCTACCAATGGCGCAACCATTTCCTCAAATCGGCGGTAGTAATTCGCCATCGTGCTGTCTTGTTGAATAGCCAGAAAACAAGCGCAAATGTTCGCTTCTTGCGATGGGCGAAAGCAAATTAACATTTGGAACTTGAGGTTGTTCCAGTAAACTACTTCTATGTGATTGCCCAACGATACCATAATAGTGCCTCCTTGTCGAAACTAACGATGGATACCGTAAGTTTCTCTAAGTCCGTTAACCGGTGGACTTCAAAGTACCTTTTGGTGCGAAAGAACCATGTGGCAGCGTATCCGCTGGAAAAAATCGGCATTTCTATTTTTTTGAGCTTATTTTGGTCACAAAGGCTTCCTTCGATATTACCCGTTGTCCTCCTCCTCGGCAATATGTTGATTTTTTATGATACTGAGAGGAGTCAGAGTAAACTTTTGGGATGTTATACCTTGTTTTTCTTCTTCCTCCTGGAGTTATTTCTCTTAACACTTCCCTAATTTCTTTTTATCATTTTCTTTATTACAGATTCAAGATAATTGGAGATCTTTTTTTAACTCCATTGTCTTATGAGTTATGAGGGGCTTTTCTGATTCTTTCTTGTATATCTCATCATAAATATCATCGCTTCTTATTAAAAAAACATGATGCAGGTTCTAAATATTTTTAGGTGTCAATTTCAATGTGTAACAACTAGGGATACAACTTTTGACCTACAGAATTCATTTCGTTTGGTAAAAAATGGAATTCATTTCGTTCAAGGTTCCACAGTATATGTGATCTAATTATCTTGAGTAAGCAGTTTCCTAATTTTATTAGGATTTCTTTGGCTGGGTTATGTATTTCATTCTTTCCTCCTTGAAAGAAAAGGTAAGGTATTATATTCTGTACTATTAGGCATTAAAATTTGAATGGTTTCTTGGTAATTGTCCCTAATGCTCACTTTTCTTTCTTTTCCCTGCTTTTTCTATGATTATTTGCATCAGAAGTGGCTTTTAACTTACCACACTTGGACGGTTTGATTTGCAGTTATAGATTTCATTATAACTATTTACTTGGTATTTTACATCATACATCAATGGTTTGGTTTCCTCATCTTCTCAAGTGGTAATTTGAGTTTGTTGTATGTGCATGCATATACATTGCTAAAATCAATTCAATTCTTTGTAAGAGTGTTGTTGTTTCCTTTCACTTGATATTTAAAGCAGCCTCCTGGGTCACAACTTATTGGAAGATCAGCTGCTTCACCTTCTGGTACTACGGCCACATCCTTTGACAACACAACATCACCATTGCCATATGCTAACTCTCCAAGGTCTACAAACATTATGAACACGCCTTCTCCTCAACAGCAGACCCAACAACAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAGCAACAACAACTTCAGGCCCAGCAACAAAGGCAAAAATTGATGCAACTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGTTGAGGCAGTCTCCCATGCAAGGAATAGGACAGGTTATATGCTTGCTCTTCAAGTAAATAATAAGACTTGATAATTTAGGCCCTATTTGAGAACGATTTTGTTTTTAGTTTTCTGTTAAAAATTATGTTTGTTCATTCATATTTTCTTTGGCATGTTTAATAAAAACACATTTGAATTCTCGGCTAAAATTCAAAAACAAAAACAAGTTTTTGAAAACTACTTTTTTAGTATAAAAATTTTGGGTTAGATTTTAAAAACGTTTTTAGAAAGTAGAAAGCAAAACAAAGGAATACATTGGTGAAAGTAGTATTTTTTATTTTTTATTATTTTATAAGAAACAGAGAATTTCATTATCAAAGAGAGGAGATACAAAAGAAGGGGAAAAACAATCTCCAATGCCAAGAGTTACAAAAAAGACTTCCAATTGGTGTTAAGATTCATGAAGCCATAATTACAAAACAATCTATCAATAAGGCACCAAGAAGATACAAAAGTATGAACGACTTCCCAAGATCGGTTATAAAACAACTTCCCAAGTCAAAGTAGTATTTATAAACTTAATTTTCAAAAACAGAAAACCAAAAACAAAATAGTTATGAAACGGTGCCTTAATTACTAATACAATTTTCTCAATATTTATTTCACTTTCCAAAACCTAGGCATGTAGTATCATCCATCTTTTCTCCCGACTGCTTGTCAAGTACATGGAAGCATAAAAATTTGATTCTGCCATTTATGGTATTATTCTAGCCATTAGAAACTATTACTTAGGAAAAAGAAACACATTTGTGGAATCTTAATAGACATCTTCCTGGGCTATCAAAAGAACCATGGCCTGTTCAATAGTTCTATTCTATAGTTTTATTAGCTGTTGTCTATAGTTTTATTAACTAGTTTGTGGCAAAATATTTGCCCCATCCACGTAGGTAATTACAACCTCTTGTGTATACCCCATTGTTCCTCAATAGCCCAGTGGTAGAGTGGTTAGCTGTTAATGAATTGGTATATACTGATAACTTGATCACAGTCATACTTTTAACTGAACAGCATCAGATGCAGTTTTCACAGCCATTAGTGCACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGACATGTTCAACATGGCATCAGTCAAAGCCAACTTGGCCAAGGAAATCAAATGAATCGTCACTTGAGCCAGTTTTCTAGTGCTACTAACAGTGGTTTGTTTAATGCTGCGCAGACTACACCAAGTTCTCAAATGGTCAGATATCTCCATCCTTAATTTTGTTAATATTTAGTGCCTTCTTTTTCTTCCTTCCTTAAACGTAGTTGGATTGATATTACCATCATCCTAGTATATTGCATGGAGTCAATTTTATGTCATTAAAGGTTTGTAGCAGTACTTAAATGTTAACTTTCCACTCTGCCTCAAATATATTGTTTTGAGGAGCGAAATTACTCCTGCATATGGCGGGGAGTCCAATTTGACCCATTGGCCTTGAAATACGGGCTTATCTTTTCCTTTCCATTTACAAATAGCTGTGTCCCATCCCCGATACTTCTCACCAGTGACATGATACTGCCAATTTATCTCGTTACCTCCTAATTCCGTTTTTATTCTAATCCCTTTCTTCTTTAATATAAAACCCTAACTTTTATTAATTAATATAAACACAAGATGCATTTTTTTTTGTTGTTGTTGTTATAAGAGACAAAATTTCCATTTCATAAGAGGGGAGAATGTATAGAAAGACTGAGGAGTTGCAAAATGGATCTCCAGCTGGTCATGCTGTCAGGTAATTACATAAAATGATTAAATTTTAAGGACCAAAAATACATGCTACACTAAATCTTTCCCAAAATGGGATTCACCAAAAAAGGAAAAAAAGTTGTCTTATAGTTGTGAGGTGACCATTTTCTTCCATTGCGAATGAAATTTAAGAGATACATTTCATTCTAATGATACCTGAGACATGAATTTCTCAACCTTTATTTAGTTGTAATTTTAAGTCACTGTCGTTTTTGTGACACTTGTAGTCAGCAATGATTTCACTAGCAGTTAAATCTAGATCTAGAATTTGACTTCCGCTGACAAAACTTTTTGAGACTTGGAGATTCTTTGGGGTAGCACTTTGCTCAGTCCATGACTAAGAGAAAGAACACTGGCCAAAATTGTAGGCTTGAGATGAGACTTATAGGTCGAGAATTTGCCACCAGAGTGCGGCTTGGAGATGAGGCATGGATATGGTGACATCCAGTAGGACATATATGATACAAGAACATGTTTTGATCGTGACACAATTCTATGATTTTCATATTTTCATGTGTACTCTATATGATTATATCTCCTCAATGAGAGCCCCCTTTGGAATAATGAGAATTAATCTCAAGCCCATATTCTTTGGCAGTTGTTCCGTCTTCTTTTTATTTATTTTTGGGTAATCAAACCTTTGTTAAAGAAAAGAAAAAAAAGGAGTGGAGGGAAGAAGAAACCTCTTAAAACCACCACAATTAGTTGGCATAAAATGTGTAATTAATATGAGAAATGTGTGAATATTAACCATCCAGAAGCTAGAAAGAAAGGAAGATCAACATCTTCAATAATACTAGGAGTCCTCTCAACAATTATTTTCTTCCTGTTAATCCAAATTTCTCAAAAATTAGCAGCCACCAGTTTGCCCAGACGACAGTCCTGAGAGCATATGAGAGACTTCCTTGTAACATTAGAACAGCCCTGCAGCTCAAAGAACTTGAAATTTTTTATCCAATCCTTTTAACAGCATGATAGGGGACAATAAATGGTTTTATTTTTCTTTCTCGAACAAGGTTTCTTGATTTGGATGGTTTTAGGTCATGACGTCTCTTCTAAAACCCAAACACAATCTCTTTCTTCTGTAGATTGAGCACTTGAATTATTTGTTGTGATGCAAATTTTCAGAGTTTCTTGATAACCTAAAATTAAAAATTGGGGTTCTGGTTTCACTTGTAATTCTAAAAACATAGATTGACACCCCGGCATAGTAGATTTTATCTTTATCTTATTTTAATTGCTATTGAATTCTCTCTCTCTCTCTCTCCCCTTTTTTTTTTTTCCCTTTTTCAGATTCCTAATATTTCAGCAGCAGTGTCATCACAACCACTCATGGCACGCATGCAGGTGTGTTCTAATTTGCTTGTTAAATTTTGCTTATATTTAATTTTTCAAGTGCTGGTGAGGGTAAAAGGAGAGTCTGAGGGAGGAGGGTGTATGCAAAATACTATTCTGTGTTGACAGGAATCAAACCAATTGCAAGTTAATTGAGTTCAATTAGGCCCTCCTCTTTTATGCAAATACTATTCTGTGTTGACAGAGAATTTCATGATATTCTCTCTGGTAACCTGAATTTTTTCATATGGAATCAAAGAGATCGGATCATTGCAGTGTATTGGCCAAATGTCCAAGTGATATAAAATAATTCTTGTGTTTCGTTCTTTTCAGACCGAGATTTTAGGATTGCTTTTAATGCTCCTTACATGCCTTATAATAAATAGTAGGAGAAACAAATCTATAAACAGATGTTTTACTATGTACCATGTCTTCTATGAAGCTAATGCCGTCTTACTATCCCAAGTTCTCACATCCTTGAGTATTAATTGCTTTGTACAAAGTGTATTCTTTATGGCACCGTATCATTGTTATCTCCTTTGCACTCAGGATATTTTCGGAATTCTTTTTTTTCACTGGCATTTAATTTGTTTCAGTATGCGTTACCGGGGAGCAATCCGCAGCGAAGCCATGCTTCTCAAATTCTGAGTGATCAGAGTATGTAGCGCCATGGCTTACATGTACATTAAAAAAATACATAGCGCTGCGCCGTGTAATATTTGTTTGAACTTGTTTTATTCCTCAGTGTTCAACATGGGAGGAGGTAATCCGGGTGGTATGATGCCTATGCAGCAGCAACAGCAGCAGCAGCATGCTCCACAAGGGGCATTTGGTAACATGCCAGCAAATGCACAGTCTCTACAATCTGGTATGGTACCACTTCAGAACATGCAACAGACTCACCCTAATTTTGGTCAGCAGAGACAGCAAAATCAGCCA

mRNA sequence

ATGGCAGCCATGGACGGGGTGGTGCAGAATCAGCCTCAGCAGCAGCAGCAGCAGCAGCCTCCGCCGCCGCAGCCGGTGGTTGTTGCGGAAAGGCTGAACCAGGCGGTACAGCAACAGCTGAACCTGGAGGCTGTGAAGACTCGAGCTATTACTCTATTCAAAGCCATCTCACGGATCCTCGAAGATTTTGATGTCTATGGTCGCACCAATACAACGCCCAAATGGCAAGACATATTGGGGCAATATTCTATGGTGAATCTCGAGCTCTTCAACATTGTTGACGAAATTAAGAAGGTTTCTAAGGCTTTCGTTGTACATCCAAAGAATGTGAATGCAGAGAATTCGACAATTCTACCGGTTATGTTGTCCTCAAAATTGTTGCCTGAGATGGAGATAGACGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCAAAACATGCCAATATCTACACAGATTGATAAATTAAAGACTAGAATAGAAATGATTGGTGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAGACTCGGAAGGCATATTGTTTTGGAATGCGTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTCACTGCGAGCTGCTGTTAACTTTGGGGAAGGATTATTTACTGGTGAGCAAAGGCAGATTACACCAACACTTCCAATGCATTTGGTAGATGTGCTGAATGTAGGTGATGGAGTACAAAGTTTTAATGAAACGTCAGGTAGTATGTATGCAAAGAATACTCCTCTAACATCAAGTAATATTAGTGGTCAAGGATCATTGTTTCAGCAGCCTCCTGGGTCACAACTTATTGGAAGATCAGCTGCTTCACCTTCTGGTACTACGGCCACATCCTTTGACAACACAACATCACCATTGCCATATGCTAACTCTCCAAGGTCTACAAACATTATGAACACGCCTTCTCCTCAACAGCAGACCCAACAACAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAGCAACAACAACTTCAGGCCCAGCAACAAAGGCAAAAATTGATGCAACTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGTTGAGGCAGTCTCCCATGCAAGGAATAGGACAGCATCAGATGCAGTTTTCACAGCCATTAGTGCACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGACATGTTCAACATGGCATCAGTCAAAGCCAACTTGGCCAAGGAAATCAAATGAATCGTCACTTGAGCCAGTTTTCTAGTGCTACTAACAGTGGTTTGTTTAATGCTGCGCAGACTACACCAAGTTCTCAAATGATTCCTAATATTTCAGCAGCAGTGTCATCACAACCACTCATGGCACGCATGCAGTATGCGTTACCGGGGAGCAATCCGCAGCGAAGCCATGCTTCTCAAATTCTGAGTGATCAGATGTTCAACATGGGAGGAGGTAATCCGGGTGGTATGATGCCTATGCAGCAGCAACAGCAGCAGCAGCATGCTCCACAAGGGGCATTTGGTAACATGCCAGCAAATGCACAGTCTCTACAATCTGGTATGGTACCACTTCAGAACATGCAACAGACTCACCCTAATTTTGGTCAGCAGAGACAGCAAAATCAGCCA

Coding sequence (CDS)

ATGGCAGCCATGGACGGGGTGGTGCAGAATCAGCCTCAGCAGCAGCAGCAGCAGCAGCCTCCGCCGCCGCAGCCGGTGGTTGTTGCGGAAAGGCTGAACCAGGCGGTACAGCAACAGCTGAACCTGGAGGCTGTGAAGACTCGAGCTATTACTCTATTCAAAGCCATCTCACGGATCCTCGAAGATTTTGATGTCTATGGTCGCACCAATACAACGCCCAAATGGCAAGACATATTGGGGCAATATTCTATGGTGAATCTCGAGCTCTTCAACATTGTTGACGAAATTAAGAAGGTTTCTAAGGCTTTCGTTGTACATCCAAAGAATGTGAATGCAGAGAATTCGACAATTCTACCGGTTATGTTGTCCTCAAAATTGTTGCCTGAGATGGAGATAGACGACAATTCGAAACGAGAGCAGTTGCTTCTTGGGATGCAAAACATGCCAATATCTACACAGATTGATAAATTAAAGACTAGAATAGAAATGATTGGTGCAGCCTGTGAAAGTGCTGAAAAAATATTAGCTGAGACTCGGAAGGCATATTGTTTTGGAATGCGTCAAGGGCCAGCAATAGCTCCAACTTTAGATAAGGCTCAAGCTGCAAAAATTCAGGAGCAAGAGAATTCACTGCGAGCTGCTGTTAACTTTGGGGAAGGATTATTTACTGGTGAGCAAAGGCAGATTACACCAACACTTCCAATGCATTTGGTAGATGTGCTGAATGTAGGTGATGGAGTACAAAGTTTTAATGAAACGTCAGGTAGTATGTATGCAAAGAATACTCCTCTAACATCAAGTAATATTAGTGGTCAAGGATCATTGTTTCAGCAGCCTCCTGGGTCACAACTTATTGGAAGATCAGCTGCTTCACCTTCTGGTACTACGGCCACATCCTTTGACAACACAACATCACCATTGCCATATGCTAACTCTCCAAGGTCTACAAACATTATGAACACGCCTTCTCCTCAACAGCAGACCCAACAACAGCAACAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAACAGCAACAACAACTTCAGGCCCAGCAACAAAGGCAAAAATTGATGCAACTACCTCAGCATCAGCAACTCCTTGCTCAACAACAGTTGAGGCAGTCTCCCATGCAAGGAATAGGACAGCATCAGATGCAGTTTTCACAGCCATTAGTGCACCAGCAATTTCAGGGAAGGCAGATGTCTTCTGGACATGTTCAACATGGCATCAGTCAAAGCCAACTTGGCCAAGGAAATCAAATGAATCGTCACTTGAGCCAGTTTTCTAGTGCTACTAACAGTGGTTTGTTTAATGCTGCGCAGACTACACCAAGTTCTCAAATGATTCCTAATATTTCAGCAGCAGTGTCATCACAACCACTCATGGCACGCATGCAGTATGCGTTACCGGGGAGCAATCCGCAGCGAAGCCATGCTTCTCAAATTCTGAGTGATCAGATGTTCAACATGGGAGGAGGTAATCCGGGTGGTATGATGCCTATGCAGCAGCAACAGCAGCAGCAGCATGCTCCACAAGGGGCATTTGGTAACATGCCAGCAAATGCACAGTCTCTACAATCTGGTATGGTACCACTTCAGAACATGCAACAGACTCACCCTAATTTTGGTCAGCAGAGACAGCAAAATCAGCCA

Protein sequence

MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRILEDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDVLNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSFDNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQLPQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQMNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHASQILSDQMFNMGGGNPGGMMPMQQQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHPNFGQQRQQNQP

Homology

[Close]

BLAST of MS014485 vs. NCBI nr
Match: XP_022144408.1 (mediator of RNA polymerase II transcription subunit 8 isoform X1 [Momordica charantia])

HSP 1 Score: 980.3 bits (2533), Expect = 6.7e-282
Identity = 546/551 (99.09%), Postives = 547/551 (99.27%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL
Sbjct: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGR+NTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRSNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240

Query: 241 LNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSF 300
           LNVGDGVQSFNETSG MYAKNTPL SSNISGQGSL QQPPGSQLIGRSAASPSGTTATSF
Sbjct: 241 LNVGDGVQSFNETSG-MYAKNTPLISSNISGQGSLLQQPPGSQLIGRSAASPSGTTATSF 300

Query: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360
           DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL
Sbjct: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360

Query: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420
           PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ
Sbjct: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420

Query: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480
           MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS
Sbjct: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480

Query: 481 QILSDQMFNMGGGNPGGMMPMQQQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540
           QILSDQMFNMGGGNPGGMMPM QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP
Sbjct: 481 QILSDQMFNMGGGNPGGMMPM-QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540

Query: 541 NFGQQRQQNQP 552
           NFGQQRQQNQP
Sbjct: 541 NFGQQRQQNQP 549

[Close]

BLAST of MS014485 vs. NCBI nr
Match: XP_022144409.1 (mediator of RNA polymerase II transcription subunit 8 isoform X2 [Momordica charantia])

HSP 1 Score: 973.8 bits (2516), Expect = 6.3e-280
Identity = 545/551 (98.91%), Postives = 546/551 (99.09%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL
Sbjct: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGR+NTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRSNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240

Query: 241 LNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSF 300
           LNVGDGVQSFNETSG MYAKNTPL SSNISGQGSL  QPPGSQLIGRSAASPSGTTATSF
Sbjct: 241 LNVGDGVQSFNETSG-MYAKNTPLISSNISGQGSLL-QPPGSQLIGRSAASPSGTTATSF 300

Query: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360
           DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL
Sbjct: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360

Query: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420
           PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ
Sbjct: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420

Query: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480
           MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS
Sbjct: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480

Query: 481 QILSDQMFNMGGGNPGGMMPMQQQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540
           QILSDQMFNMGGGNPGGMMPM QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP
Sbjct: 481 QILSDQMFNMGGGNPGGMMPM-QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540

Query: 541 NFGQQRQQNQP 552
           NFGQQRQQNQP
Sbjct: 541 NFGQQRQQNQP 548

[Close]

BLAST of MS014485 vs. NCBI nr
Match: XP_022144410.1 (mediator of RNA polymerase II transcription subunit 8 isoform X3 [Momordica charantia])

HSP 1 Score: 967.6 bits (2500), Expect = 4.5e-278
Identity = 542/551 (98.37%), Postives = 543/551 (98.55%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL
Sbjct: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGR+NTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRSNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240

Query: 241 LNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSF 300
           LNVGDGVQSFNETSG MYAKNTPL SSNISGQGSL QQPPGSQLIGRSAASPSGTTATSF
Sbjct: 241 LNVGDGVQSFNETSG-MYAKNTPLISSNISGQGSLLQQPPGSQLIGRSAASPSGTTATSF 300

Query: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360
           DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL
Sbjct: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360

Query: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420
           PQHQQLLAQQQLRQSPMQGIG    QFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ
Sbjct: 361 PQHQQLLAQQQLRQSPMQGIG----QFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420

Query: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480
           MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS
Sbjct: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480

Query: 481 QILSDQMFNMGGGNPGGMMPMQQQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540
           QILSDQMFNMGGGNPGGMMPM QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP
Sbjct: 481 QILSDQMFNMGGGNPGGMMPM-QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540

Query: 541 NFGQQRQQNQP 552
           NFGQQRQQNQP
Sbjct: 541 NFGQQRQQNQP 545

[Close]

BLAST of MS014485 vs. NCBI nr
Match: XP_023526991.1 (mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 849.7 bits (2194), Expect = 1.4e-242
Identity = 498/560 (88.93%), Postives = 511/560 (91.25%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MA MDGV QNQPQQQQ    P    VVVAERLNQAVQQQLNLEAVKTRA TLFKAISRIL
Sbjct: 1   MATMDGVAQNQPQQQQPLLAP---QVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEME+DDNSKR+QLLLGMQNMPISTQI+KLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGL-FTGEQRQITPTLPMHLVD 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQEN LRAAVNFGEGL    +QRQITPTLPMHLVD
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVD 240

Query: 241 VLNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATS 300
           VLNVGDGVQSFNETSG MYAKNTPLTS NI G GSL QQPPGSQL+GRSAASPSG  ATS
Sbjct: 241 VLNVGDGVQSFNETSG-MYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSG--ATS 300

Query: 301 FDNTTSPLPYANSPRST-NIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQ-QQRQKL 360
           FDNTTSPLPYANSPRST N+MN PSPQQQTQQQQQQQQQQQQQQQQQQQ Q Q QQRQKL
Sbjct: 301 FDNTTSPLPYANSPRSTANVMNVPSPQQQTQQQQQQQQQQQQQQQQQQQQQLQVQQRQKL 360

Query: 361 MQLPQHQQLLAQQQLRQSPMQGI----GQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQS 420
           MQLPQHQQLLAQQQ+RQSPMQGI    GQHQMQFSQPL HQQFQGRQMSSGH+QHGI+QS
Sbjct: 361 MQLPQHQQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQS 420

Query: 421 QLGQGNQMNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSN 480
           QLGQGNQMNRHLSQFS A NS LFNAAQTTPSSQMIPNISA +SSQPLM R+QY   GSN
Sbjct: 421 QLGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY---GSN 480

Query: 481 PQRSHASQILSDQMFNMGGGNPGGMMPMQQQQQQQH---APQGAFGNMPANAQSLQSGMV 540
           PQRSHA QILSDQMFNMGGG+ GGMMPMQQQQQQQ    APQGAFGNM  NAQSLQSGM+
Sbjct: 481 PQRSHA-QILSDQMFNMGGGSAGGMMPMQQQQQQQQQQLAPQGAFGNMATNAQSLQSGML 540

Query: 541 PLQNMQQTHPNFGQQRQQNQ 551
           PLQNMQQTHPNFGQQRQQNQ
Sbjct: 541 PLQNMQQTHPNFGQQRQQNQ 550

[Close]

BLAST of MS014485 vs. NCBI nr
Match: XP_038907099.1 (mediator of RNA polymerase II transcription subunit 8 isoform X3 [Benincasa hispida])

HSP 1 Score: 847.0 bits (2187), Expect = 8.9e-242
Identity = 483/559 (86.40%), Postives = 503/559 (89.98%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MA MDG VQ QP   QQQQP P QPV VAERLNQAVQQQLNLEA+K RA TLFKAISRIL
Sbjct: 1   MATMDGAVQTQP---QQQQPLPAQPVAVAERLNQAVQQQLNLEALKNRATTLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEME+DDNSKREQLLLGM NMP+STQI+KLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEVDDNSKREQLLLGMHNMPVSTQIEKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGL-FTGEQRQITPTLPMHLVD 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQEN LRAAVNFGEGL   GEQRQITPTLPMHL+D
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPGEQRQITPTLPMHLID 240

Query: 241 VLNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSG-TTAT 300
           VLNVGDGVQSFNETSG MY KNT LTS+NISGQGSL QQPPGSQL+GRSAASPSG T+AT
Sbjct: 241 VLNVGDGVQSFNETSG-MYTKNT-LTSNNISGQGSLIQQPPGSQLVGRSAASPSGATSAT 300

Query: 301 SFDNTTSPLPYANSPRST-NIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKL 360
           SFDNTTSPLPYANSPRS+ NIMNTPSPQQQT             QQQQQQLQ  QQRQK+
Sbjct: 301 SFDNTTSPLPYANSPRSSVNIMNTPSPQQQT-------------QQQQQQLQQVQQRQKM 360

Query: 361 MQLPQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQ 420
           MQLPQHQQLLAQQQ+RQS MQGIGQHQMQFSQPL HQQFQGRQMSSGHVQHGI+QSQLGQ
Sbjct: 361 MQLPQHQQLLAQQQMRQSSMQGIGQHQMQFSQPLAHQQFQGRQMSSGHVQHGITQSQLGQ 420

Query: 421 GNQMNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRS 480
           GNQ+NR LSQFS A NS LFNAAQ+TP+SQMIPNISA +SSQPLM+RMQY LP SNPQRS
Sbjct: 421 GNQINRQLSQFSGAANSSLFNAAQSTPTSQMIPNISATMSSQPLMSRMQYGLPVSNPQRS 480

Query: 481 HASQILSDQMFNMGGGNPGGMMPM------QQQQQQQHAPQGAFGNMPANAQSLQSGMVP 540
           HASQILSDQ+FN+GGG+ GGMMPM      QQQQQQQ A QGAFGNMP NAQSLQSGMVP
Sbjct: 481 HASQILSDQIFNLGGGSTGGMMPMQQQQQVQQQQQQQLASQGAFGNMPTNAQSLQSGMVP 540

Query: 541 LQNMQQTHPNFGQQRQQNQ 551
           LQNMQQTHPNFGQQRQQNQ
Sbjct: 541 LQNMQQTHPNFGQQRQQNQ 541

[Close]

BLAST of MS014485 vs. ExPASy Swiss-Prot
Match: Q4V3C1 (Mediator of RNA polymerase II transcription subunit 8 OS=Arabidopsis thaliana OX=3702 GN=MED8 PE=1 SV=1)

HSP 1 Score: 502.7 bits (1293), Expect = 5.4e-141
Identity = 326/559 (58.32%), Postives = 393/559 (70.30%), Query Frame = 0


Query: 14  QQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRILEDFDVYGRTNTTP 73
           + Q QQPPPP    VAE+LN  ++++LNLE++KTRA++L KAI+RILEDFD YGRTNTTP
Sbjct: 2   ETQPQQPPPPP---VAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTP 61

Query: 74  KWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEID 133
           KWQDILGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME D
Sbjct: 62  KWQDILGQYSMVNLELFNIVEEVKRVSNAFVVLPKNVNAMNAAILPVMLSSKLLPEMETD 121

Query: 134 DNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIA 193
           DN+KREQLL G+Q++PI  QI++LK R++MI AACE+AE++LA+TRKAY FG RQGP++ 
Sbjct: 122 DNAKREQLLQGVQSLPIPMQIERLKARMDMIAAACENAERVLADTRKAYGFGTRQGPSML 181

Query: 194 PTLDKAQAAKIQEQENSLRAAVNFGEGL-FTGEQRQITPTLPMHLVDVLNVGDGVQSFNE 253
           PT+DK QAAKIQEQE  LR AVN G+G     +QRQIT  LP HL DVL + D       
Sbjct: 182 PTMDKGQAAKIQEQEKMLRDAVNDGKGTQLPPDQRQITTALPPHLADVLIIND------- 241

Query: 254 TSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSFDNTTSPLPYANS 313
            +G +     P  S+NI+ QG +  Q  G+Q +GRSAASPSG    +FDNTTSPLPY+NS
Sbjct: 242 -AGKI---ALPGQSNNINNQGMM--QVSGTQFVGRSAASPSG---PNFDNTTSPLPYSNS 301

Query: 314 PRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQLPQH--QQLLA-- 373
           PR+T ++N PSPQ Q QQQQ QQ               QQQR KLMQLPQH  QQLLA  
Sbjct: 302 PRATGMVNVPSPQHQIQQQQFQQ---------------QQQRSKLMQLPQHQQQQLLAQQ 361

Query: 374 QQQLRQSPMQGI-----------------------GQHQMQFSQPL-VHQQFQGRQMSSG 433
           QQQLRQS MQG+                       GQHQM +SQP+  HQQFQ RQ+S G
Sbjct: 362 QQQLRQSSMQGLGQSQIPALHDMHGQAQQKFQTSHGQHQMPYSQPMGAHQQFQARQLSGG 421

Query: 434 HVQHGISQSQLGQGNQMNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMAR 493
           H+QH +SQ QL     MNRHL+QFS   NS LF +AQ +PSSQMIPN+S ++ SQ L+ R
Sbjct: 422 HIQHSMSQGQLNPA--MNRHLNQFSGGANSALFTSAQGSPSSQMIPNMS-SMQSQTLVPR 481

Query: 494 M-QYALPGSNPQRSHASQILSDQMFNMGGGNPGGMMPMQQ-QQQQQHAPQGAFGNMPANA 542
           M Q+ + G+NPQRSH+SQ+L DQMFN  G        +QQ QQQQQ   QG +GNM  N 
Sbjct: 482 MQQFGVSGTNPQRSHSSQMLGDQMFNTSGMMQTQQTQIQQSQQQQQQQQQGGYGNMQTNQ 522

[Close]

BLAST of MS014485 vs. ExPASy TrEMBL
Match: A0A6J1CT64 (mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014102 PE=4 SV=1)

HSP 1 Score: 980.3 bits (2533), Expect = 3.3e-282
Identity = 546/551 (99.09%), Postives = 547/551 (99.27%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL
Sbjct: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGR+NTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRSNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240

Query: 241 LNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSF 300
           LNVGDGVQSFNETSG MYAKNTPL SSNISGQGSL QQPPGSQLIGRSAASPSGTTATSF
Sbjct: 241 LNVGDGVQSFNETSG-MYAKNTPLISSNISGQGSLLQQPPGSQLIGRSAASPSGTTATSF 300

Query: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360
           DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL
Sbjct: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360

Query: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420
           PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ
Sbjct: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420

Query: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480
           MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS
Sbjct: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480

Query: 481 QILSDQMFNMGGGNPGGMMPMQQQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540
           QILSDQMFNMGGGNPGGMMPM QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP
Sbjct: 481 QILSDQMFNMGGGNPGGMMPM-QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540

Query: 541 NFGQQRQQNQP 552
           NFGQQRQQNQP
Sbjct: 541 NFGQQRQQNQP 549

[Close]

BLAST of MS014485 vs. ExPASy TrEMBL
Match: A0A6J1CS82 (mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014102 PE=4 SV=1)

HSP 1 Score: 973.8 bits (2516), Expect = 3.0e-280
Identity = 545/551 (98.91%), Postives = 546/551 (99.09%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL
Sbjct: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGR+NTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRSNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240

Query: 241 LNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSF 300
           LNVGDGVQSFNETSG MYAKNTPL SSNISGQGSL  QPPGSQLIGRSAASPSGTTATSF
Sbjct: 241 LNVGDGVQSFNETSG-MYAKNTPLISSNISGQGSLL-QPPGSQLIGRSAASPSGTTATSF 300

Query: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360
           DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL
Sbjct: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360

Query: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420
           PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ
Sbjct: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420

Query: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480
           MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS
Sbjct: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480

Query: 481 QILSDQMFNMGGGNPGGMMPMQQQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540
           QILSDQMFNMGGGNPGGMMPM QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP
Sbjct: 481 QILSDQMFNMGGGNPGGMMPM-QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540

Query: 541 NFGQQRQQNQP 552
           NFGQQRQQNQP
Sbjct: 541 NFGQQRQQNQP 548

[Close]

BLAST of MS014485 vs. ExPASy TrEMBL
Match: A0A6J1CRJ0 (mediator of RNA polymerase II transcription subunit 8 isoform X3 OS=Momordica charantia OX=3673 GN=LOC111014102 PE=4 SV=1)

HSP 1 Score: 967.6 bits (2500), Expect = 2.2e-278
Identity = 542/551 (98.37%), Postives = 543/551 (98.55%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL
Sbjct: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGR+NTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRSNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGLFTGEQRQITPTLPMHLVDV 240

Query: 241 LNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSF 300
           LNVGDGVQSFNETSG MYAKNTPL SSNISGQGSL QQPPGSQLIGRSAASPSGTTATSF
Sbjct: 241 LNVGDGVQSFNETSG-MYAKNTPLISSNISGQGSLLQQPPGSQLIGRSAASPSGTTATSF 300

Query: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360
           DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL
Sbjct: 301 DNTTSPLPYANSPRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQL 360

Query: 361 PQHQQLLAQQQLRQSPMQGIGQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420
           PQHQQLLAQQQLRQSPMQGIG    QFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ
Sbjct: 361 PQHQQLLAQQQLRQSPMQGIG----QFSQPLVHQQFQGRQMSSGHVQHGISQSQLGQGNQ 420

Query: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480
           MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS
Sbjct: 421 MNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNPQRSHAS 480

Query: 481 QILSDQMFNMGGGNPGGMMPMQQQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540
           QILSDQMFNMGGGNPGGMMPM QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP
Sbjct: 481 QILSDQMFNMGGGNPGGMMPM-QQQQQQHAPQGAFGNMPANAQSLQSGMVPLQNMQQTHP 540

Query: 541 NFGQQRQQNQP 552
           NFGQQRQQNQP
Sbjct: 541 NFGQQRQQNQP 545

[Close]

BLAST of MS014485 vs. ExPASy TrEMBL
Match: A0A6J1IZN9 (mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479910 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 4.0e-240
Identity = 492/558 (88.17%), Postives = 506/558 (90.68%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MA MDGVVQNQPQQQQ    P    VVVAERLNQAVQQQLNLEAVKTRA TLFKAISRIL
Sbjct: 1   MATMDGVVQNQPQQQQPLLAP---QVVVAERLNQAVQQQLNLEAVKTRATTLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEME++DNSKR+QLLLGMQNMPISTQI+KLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEVEDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGL-FTGEQRQITPTLPMHLVD 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQEN LRAAVNFGEGL    +QRQITPTLPMHLVD
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVD 240

Query: 241 VLNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATS 300
           VLNVGDGVQSFNETSG MYAKNTPLTS NI G GSL QQPPGSQL+GRSAASPSG  ATS
Sbjct: 241 VLNVGDGVQSFNETSG-MYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSG--ATS 300

Query: 301 FDNTTSPLPYANSPRST-NIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLM 360
           FDNTT PLPYANSPRST N+MN PSPQQQTQQQQQQQQQQQQQQQ Q      QQRQKLM
Sbjct: 301 FDNTTPPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQQQLQ-----VQQRQKLM 360

Query: 361 QLPQHQQLLAQQQLRQSPMQGI----GQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQ 420
           QLPQHQQLLAQQQ+RQSPMQGI    GQHQMQFSQPL HQQFQGRQMSSGH+QHGI+QSQ
Sbjct: 361 QLPQHQQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQ 420

Query: 421 LGQGNQMNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNP 480
           LGQGNQMNRHLSQFS A NS LFNAAQTTPSSQMIPNISA +SSQPLM R+QY   GSNP
Sbjct: 421 LGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY---GSNP 480

Query: 481 QRSHASQILSDQMFNMGGGNPGGMMPMQQQQQQQH--APQGAFGNMPANAQSLQSGMVPL 540
           QRSHA QILSDQMFNMGGG+ GGMMPMQQQQQQQ   APQGAFGNM  NAQSLQSGM+PL
Sbjct: 481 QRSHA-QILSDQMFNMGGGSAGGMMPMQQQQQQQQQLAPQGAFGNMSTNAQSLQSGMLPL 540

Query: 541 QNMQQTHPNFGQQRQQNQ 551
           QNMQQTHPNFGQQRQQNQ
Sbjct: 541 QNMQQTHPNFGQQRQQNQ 543

[Close]

BLAST of MS014485 vs. ExPASy TrEMBL
Match: A0A6J1GV67 (mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457835 PE=4 SV=1)

HSP 1 Score: 840.5 bits (2170), Expect = 4.0e-240
Identity = 491/560 (87.68%), Postives = 504/560 (90.00%), Query Frame = 0


Query: 1   MAAMDGVVQNQPQQQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRIL 60
           MA MDGVVQNQPQQQQ    P     VVAERLNQAVQQQLNLEAVKTRA TLFKAISRIL
Sbjct: 1   MATMDGVVQNQPQQQQPLLAP---QAVVAERLNQAVQQQLNLEAVKTRATTLFKAISRIL 60

Query: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120
           EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV
Sbjct: 61  EDFDVYGRTNTTPKWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPV 120

Query: 121 MLSSKLLPEMEIDDNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRK 180
           MLSSKLLPEME+DDNSKR+QLLLGMQNMPISTQI+KLKTRIEMIGAACESAEKILAETRK
Sbjct: 121 MLSSKLLPEMEVDDNSKRDQLLLGMQNMPISTQIEKLKTRIEMIGAACESAEKILAETRK 180

Query: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENSLRAAVNFGEGL-FTGEQRQITPTLPMHLVD 240
           AYCFGMRQGPAIAPTLDKAQAAKIQEQEN LRAAVNFGEGL    +QRQITPTLPMHLVD
Sbjct: 181 AYCFGMRQGPAIAPTLDKAQAAKIQEQENLLRAAVNFGEGLRLPIDQRQITPTLPMHLVD 240

Query: 241 VLNVGDGVQSFNETSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATS 300
           VLNVGDGVQSFNETSG MYAKNTPLTS NI G GSL QQPPGSQL+GRSAASPSG  ATS
Sbjct: 241 VLNVGDGVQSFNETSG-MYAKNTPLTSHNIGGPGSLLQQPPGSQLVGRSAASPSG--ATS 300

Query: 301 FDNTTSPLPYANSPRST-NIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLM 360
           FDNTTSPLPYANSPRST N+MN PSPQQQTQQQQQQQQQQQQQ Q        QQRQKLM
Sbjct: 301 FDNTTSPLPYANSPRSTANVMNIPSPQQQTQQQQQQQQQQQQQLQ-------VQQRQKLM 360

Query: 361 QLPQHQQLLAQQQLRQSPMQGI----GQHQMQFSQPLVHQQFQGRQMSSGHVQHGISQSQ 420
           QLPQHQQLLAQQQ+RQSPMQGI    GQHQMQFSQPL HQQFQGRQMSSGH+QHGI+QSQ
Sbjct: 361 QLPQHQQLLAQQQMRQSPMQGIGQIHGQHQMQFSQPLAHQQFQGRQMSSGHIQHGITQSQ 420

Query: 421 LGQGNQMNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMARMQYALPGSNP 480
           LGQGNQMNRHLSQFS A NS LFNAAQTTPSSQMIPNISA +SSQPLM R+QY   GSNP
Sbjct: 421 LGQGNQMNRHLSQFSGAANSSLFNAAQTTPSSQMIPNISATMSSQPLMPRVQY---GSNP 480

Query: 481 QRSHASQILSDQMFNMGGGNPGGMMPMQQQQQQQH----APQGAFGNMPANAQSLQSGMV 540
           QRSHA QILSDQMFNMGGG+ GGMMPMQQQQQQQ     APQGAFGNM  NAQSLQSGM+
Sbjct: 481 QRSHA-QILSDQMFNMGGGSAGGMMPMQQQQQQQQQQQLAPQGAFGNMATNAQSLQSGML 540

Query: 541 PLQNMQQTHPNFGQQRQQNQ 551
           PLQNMQQTHPNFGQQRQQNQ
Sbjct: 541 PLQNMQQTHPNFGQQRQQNQ 543

[Close]

BLAST of MS014485 vs. TAIR 10
Match: AT2G03070.1 (mediator subunit 8 )

HSP 1 Score: 502.7 bits (1293), Expect = 3.8e-142
Identity = 326/559 (58.32%), Postives = 393/559 (70.30%), Query Frame = 0


Query: 14  QQQQQQPPPPQPVVVAERLNQAVQQQLNLEAVKTRAITLFKAISRILEDFDVYGRTNTTP 73
           + Q QQPPPP    VAE+LN  ++++LNLE++KTRA++L KAI+RILEDFD YGRTNTTP
Sbjct: 2   ETQPQQPPPPP---VAEKLNPKLEKELNLESLKTRAVSLAKAIARILEDFDAYGRTNTTP 61

Query: 74  KWQDILGQYSMVNLELFNIVDEIKKVSKAFVVHPKNVNAENSTILPVMLSSKLLPEMEID 133
           KWQDILGQYSMVNLELFNIV+E+K+VS AFVV PKNVNA N+ ILPVMLSSKLLPEME D
Sbjct: 62  KWQDILGQYSMVNLELFNIVEEVKRVSNAFVVLPKNVNAMNAAILPVMLSSKLLPEMETD 121

Query: 134 DNSKREQLLLGMQNMPISTQIDKLKTRIEMIGAACESAEKILAETRKAYCFGMRQGPAIA 193
           DN+KREQLL G+Q++PI  QI++LK R++MI AACE+AE++LA+TRKAY FG RQGP++ 
Sbjct: 122 DNAKREQLLQGVQSLPIPMQIERLKARMDMIAAACENAERVLADTRKAYGFGTRQGPSML 181

Query: 194 PTLDKAQAAKIQEQENSLRAAVNFGEGL-FTGEQRQITPTLPMHLVDVLNVGDGVQSFNE 253
           PT+DK QAAKIQEQE  LR AVN G+G     +QRQIT  LP HL DVL + D       
Sbjct: 182 PTMDKGQAAKIQEQEKMLRDAVNDGKGTQLPPDQRQITTALPPHLADVLIIND------- 241

Query: 254 TSGSMYAKNTPLTSSNISGQGSLFQQPPGSQLIGRSAASPSGTTATSFDNTTSPLPYANS 313
            +G +     P  S+NI+ QG +  Q  G+Q +GRSAASPSG    +FDNTTSPLPY+NS
Sbjct: 242 -AGKI---ALPGQSNNINNQGMM--QVSGTQFVGRSAASPSG---PNFDNTTSPLPYSNS 301

Query: 314 PRSTNIMNTPSPQQQTQQQQQQQQQQQQQQQQQQQLQAQQQRQKLMQLPQH--QQLLA-- 373
           PR+T ++N PSPQ Q QQQQ QQ               QQQR KLMQLPQH  QQLLA  
Sbjct: 302 PRATGMVNVPSPQHQIQQQQFQQ---------------QQQRSKLMQLPQHQQQQLLAQQ 361

Query: 374 QQQLRQSPMQGI-----------------------GQHQMQFSQPL-VHQQFQGRQMSSG 433
           QQQLRQS MQG+                       GQHQM +SQP+  HQQFQ RQ+S G
Sbjct: 362 QQQLRQSSMQGLGQSQIPALHDMHGQAQQKFQTSHGQHQMPYSQPMGAHQQFQARQLSGG 421

Query: 434 HVQHGISQSQLGQGNQMNRHLSQFSSATNSGLFNAAQTTPSSQMIPNISAAVSSQPLMAR 493
           H+QH +SQ QL     MNRHL+QFS   NS LF +AQ +PSSQMIPN+S ++ SQ L+ R
Sbjct: 422 HIQHSMSQGQLNPA--MNRHLNQFSGGANSALFTSAQGSPSSQMIPNMS-SMQSQTLVPR 481

Query: 494 M-QYALPGSNPQRSHASQILSDQMFNMGGGNPGGMMPMQQ-QQQQQHAPQGAFGNMPANA 542
           M Q+ + G+NPQRSH+SQ+L DQMFN  G        +QQ QQQQQ   QG +GNM  N 
Sbjct: 482 MQQFGVSGTNPQRSHSSQMLGDQMFNTSGMMQTQQTQIQQSQQQQQQQQQGGYGNMQTNQ 522

The following BLAST results are available for this feature:

BLAST of MS014485 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144408.1	6.7e-282	99.09	mediator of RNA polymerase II transcription subunit 8 isoform X1 [Momordica char...	[more]
XP_022144409.1	6.3e-280	98.91	mediator of RNA polymerase II transcription subunit 8 isoform X2 [Momordica char...	[more]
XP_022144410.1	4.5e-278	98.37	mediator of RNA polymerase II transcription subunit 8 isoform X3 [Momordica char...	[more]
XP_023526991.1	1.4e-242	88.93	mediator of RNA polymerase II transcription subunit 8 isoform X1 [Cucurbita pepo...	[more]
XP_038907099.1	8.9e-242	86.40	mediator of RNA polymerase II transcription subunit 8 isoform X3 [Benincasa hisp...	[more]

BLAST of MS014485 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q4V3C1	5.4e-141	58.32	Mediator of RNA polymerase II transcription subunit 8 OS=Arabidopsis thaliana OX...	[more]

BLAST of MS014485 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT64	3.3e-282	99.09	mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Momordica ch...	[more]
A0A6J1CS82	3.0e-280	98.91	mediator of RNA polymerase II transcription subunit 8 isoform X2 OS=Momordica ch...	[more]
A0A6J1CRJ0	2.2e-278	98.37	mediator of RNA polymerase II transcription subunit 8 isoform X3 OS=Momordica ch...	[more]
A0A6J1IZN9	4.0e-240	88.17	mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita ma...	[more]
A0A6J1GV67	4.0e-240	87.68	mediator of RNA polymerase II transcription subunit 8 isoform X1 OS=Cucurbita mo...	[more]

BLAST of MS014485 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G03070.1	3.8e-142	58.32	mediator subunit 8	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 325..356
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 500..551
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..25
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..334
IPR038795	Mediator of RNA polymerase II transcription subunit 8, plant	PANTHER	PTHR35552	MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 8	coord: 338..550 coord: 4..340

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014485.1	MS014485.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016592	mediator complex