MS014477 (gene) Bitter gourd (TR) v1

Overview
NameMS014477
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionMYB transcription factor
Locationscaffold553: 228376 .. 228741 (-)
RNA-Seq ExpressionMS014477
SyntenyMS014477
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
CAGTCGAAGCTGTGCGCCAGAGGCCACTGGAGGCCCGCGGAGGACGCCAAGCTCAAGGAACTGGTGGCTCTCTACGGCCCTCAGAACTGGAACCTCATAGCCGACAAGCTCCAGGGCAGATCCGGAAAAAGTTGCAGGCTCAGATGGTTCAACCAGTTGGACCCGAGGATCAACCGCAGAGCCTTCACGGAAGAGGAGGAGGAGCGGCTAATGCAGGCCCATAGACTCTACGGCAACAAGTGGGCCTGCATTGCCAGGCTTTTCCCTGGGAGGACTGATAATGCTGTTAAGAATCATTGGCATGTTATAATGGCTAGAAAATGCAGAGAACAGTTCAGTGCTTACAGGCGGCGGAAGCTCGCCCAG

mRNA sequence

CAGTCGAAGCTGTGCGCCAGAGGCCACTGGAGGCCCGCGGAGGACGCCAAGCTCAAGGAACTGGTGGCTCTCTACGGCCCTCAGAACTGGAACCTCATAGCCGACAAGCTCCAGGGCAGATCCGGAAAAAGTTGCAGGCTCAGATGGTTCAACCAGTTGGACCCGAGGATCAACCGCAGAGCCTTCACGGAAGAGGAGGAGGAGCGGCTAATGCAGGCCCATAGACTCTACGGCAACAAGTGGGCCTGCATTGCCAGGCTTTTCCCTGGGAGGACTGATAATGCTGTTAAGAATCATTGGCATGTTATAATGGCTAGAAAATGCAGAGAACAGTTCAGTGCTTACAGGCGGCGGAAGCTCGCCCAG

Coding sequence (CDS)

CAGTCGAAGCTGTGCGCCAGAGGCCACTGGAGGCCCGCGGAGGACGCCAAGCTCAAGGAACTGGTGGCTCTCTACGGCCCTCAGAACTGGAACCTCATAGCCGACAAGCTCCAGGGCAGATCCGGAAAAAGTTGCAGGCTCAGATGGTTCAACCAGTTGGACCCGAGGATCAACCGCAGAGCCTTCACGGAAGAGGAGGAGGAGCGGCTAATGCAGGCCCATAGACTCTACGGCAACAAGTGGGCCTGCATTGCCAGGCTTTTCCCTGGGAGGACTGATAATGCTGTTAAGAATCATTGGCATGTTATAATGGCTAGAAAATGCAGAGAACAGTTCAGTGCTTACAGGCGGCGGAAGCTCGCCCAG

Protein sequence

QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKLAQ
Homology
[Close]
BLAST of MS014477 vs. NCBI nr
Match: XP_022144460.1 (transcription factor MYB105-like, partial [Momordica charantia])

HSP 1 Score: 261.9 bits (668), Expect = 2.7e-66
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR
Sbjct: 34  QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 93

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL
Sbjct: 94  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 153

Query: 121 AQ 123
           AQ
Sbjct: 154 AQ 155

[Close]
BLAST of MS014477 vs. NCBI nr
Match: EXC19993.1 (Transcription factor [Morus notabilis])

HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 157 QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 216

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHR+YGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 217 AFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 276

Query: 121 AQ 123
           +Q
Sbjct: 277 SQ 278

[Close]
BLAST of MS014477 vs. NCBI nr
Match: POO03516.1 (MYB transcription factor [Trema orientale])

HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 120 QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 179

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHR+YGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 180 AFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 239

Query: 121 AQ 123
           +Q
Sbjct: 240 SQ 241

[Close]
BLAST of MS014477 vs. NCBI nr
Match: XP_010108682.2 (myb-related protein A [Morus notabilis])

HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 115 QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 174

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHR+YGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 175 AFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 234

Query: 121 AQ 123
           +Q
Sbjct: 235 SQ 236

[Close]
BLAST of MS014477 vs. NCBI nr
Match: PON54130.1 (MYB transcription factor [Parasponia andersonii])

HSP 1 Score: 246.1 bits (627), Expect = 1.5e-61
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 119 QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 178

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHR+YGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 179 AFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 238

Query: 121 AQ 123
           +Q
Sbjct: 239 SQ 240

[Close]
BLAST of MS014477 vs. ExPASy Swiss-Prot
Match: Q5NBM8 (Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV=2)

HSP 1 Score: 227.6 bits (579), Expect = 7.4e-59
Identity = 105/119 (88.24%), Postives = 110/119 (92.44%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           Q KLCARGHWRPAEDAKLK+LVA YGPQNWNLIA+KL GRSGKSCRLRWFNQLDPRINRR
Sbjct: 43  QGKLCARGHWRPAEDAKLKDLVAQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRR 102

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRK 120
           AFTEEEEERLM AHR YGNKWA IARLFPGRTDNAVKNHWHV+MAR+ REQ  A+RRRK
Sbjct: 103 AFTEEEEERLMAAHRAYGNKWALIARLFPGRTDNAVKNHWHVLMARRHREQSGAFRRRK 161

[Close]
BLAST of MS014477 vs. ExPASy Swiss-Prot
Match: Q9SEZ4 (Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1)

HSP 1 Score: 227.6 bits (579), Expect = 7.4e-59
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 6   ARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 65
           +RGHWRPAED KLKELVA+YGPQNWNLIA+KLQGRSGKSCRLRWFNQLDPRINRRAFTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 66  EEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRK 120
           EEERLMQAHRLYGNKWA IARLFPGRTDN+VKNHWHVIMARK REQ S+YRRRK
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRRRK 219

[Close]
BLAST of MS014477 vs. ExPASy Swiss-Prot
Match: Q9LQX5 (Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.3e-58
Identity = 104/114 (91.23%), Postives = 109/114 (95.61%), Query Frame = 0 

Query: 7   RGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 66
           RGHWRPAED KLKELV++YGPQNWNLIA+KLQGRSGKSCRLRWFNQLDPRINRRAFTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 67  EERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 121
           EERLMQAHRLYGNKWA IARLFPGRTDN+VKNHWHV+MARK RE  SAYRRRKL
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKL 211

[Close]
BLAST of MS014477 vs. ExPASy Swiss-Prot
Match: Q6R053 (Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1)

HSP 1 Score: 201.8 bits (512), Expect = 4.4e-51
Identity = 90/109 (82.57%), Postives = 100/109 (91.74%), Query Frame = 0 

Query: 2   SKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRA 61
           +K+C+RGHWRP EDAKLKELVA +GPQNWNLI++ L GRSGKSCRLRWFNQLDPRIN+RA
Sbjct: 88  TKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRA 147

Query: 62  FTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCRE 111
           FTEEEE RL+ AHR YGNKWA I+RLFPGRTDNAVKNHWHVIMAR+ RE
Sbjct: 148 FTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]
BLAST of MS014477 vs. ExPASy Swiss-Prot
Match: Q9FX36 (Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1)

HSP 1 Score: 193.4 bits (490), Expect = 1.5e-48
Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 0 

Query: 4   LCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFT 63
           +C+RGHWRPAED KLK+LV  YGP NWN IA KL GRSGKSCRLRWFNQLDPRINR  FT
Sbjct: 3   MCSRGHWRPAEDEKLKDLVEQYGPHNWNAIALKLPGRSGKSCRLRWFNQLDPRINRNPFT 62

Query: 64  EEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCRE 111
           EEEEERL+ AHR++GN+W+ IARLFPGRTDNAVKNHWHVIMAR+ R+
Sbjct: 63  EEEEERLLAAHRIHGNRWSIIARLFPGRTDNAVKNHWHVIMARRTRQ 109

[Close]
BLAST of MS014477 vs. ExPASy TrEMBL
Match: A0A6J1CRP1 (transcription factor MYB105-like OS=Momordica charantia OX=3673 GN=LOC111014141 PE=4 SV=1)

HSP 1 Score: 261.9 bits (668), Expect = 1.3e-66
Identity = 122/122 (100.00%), Postives = 122/122 (100.00%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR
Sbjct: 34  QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 93

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL
Sbjct: 94  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 153

Query: 121 AQ 123
           AQ
Sbjct: 154 AQ 155

[Close]
BLAST of MS014477 vs. ExPASy TrEMBL
Match: A0A2P5BZB2 (MYB transcription factor OS=Parasponia andersonii OX=3476 GN=PanMYB79 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.4e-62
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 119 QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 178

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHR+YGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 179 AFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 238

Query: 121 AQ 123
           +Q
Sbjct: 239 SQ 240

[Close]
BLAST of MS014477 vs. ExPASy TrEMBL
Match: W9S0B1 (Transcription factor OS=Morus notabilis OX=981085 GN=L484_015668 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.4e-62
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 157 QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 216

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHR+YGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 217 AFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 276

Query: 121 AQ 123
           +Q
Sbjct: 277 SQ 278

[Close]
BLAST of MS014477 vs. ExPASy TrEMBL
Match: A0A2P5G0F7 (MYB transcription factor OS=Trema orientale OX=63057 GN=TorMYB79 PE=4 SV=1)

HSP 1 Score: 246.1 bits (627), Expect = 7.4e-62
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 120 QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 179

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHR+YGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 180 AFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 239

Query: 121 AQ 123
           +Q
Sbjct: 240 SQ 241

[Close]
BLAST of MS014477 vs. ExPASy TrEMBL
Match: A0A5B6WR15 (Myb-like protein B OS=Gossypium australe OX=47621 GN=mybl2 PE=4 SV=1)

HSP 1 Score: 245.7 bits (626), Expect = 9.7e-62
Identity = 115/122 (94.26%), Postives = 119/122 (97.54%), Query Frame = 0 

Query: 1   QSKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRR 60
           QSKLCARGHWRPAED+KLKELVALYGPQNWNLIA+KL+GRSGKSCRLRWFNQLDPRINRR
Sbjct: 111 QSKLCARGHWRPAEDSKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRR 170

Query: 61  AFTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 120
           AFTEEEEERLMQAHRLYGNKWA IARLFPGRTDNAVKNHWHVIMARK REQ SAYRRRKL
Sbjct: 171 AFTEEEEERLMQAHRLYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKL 230

Query: 121 AQ 123
           +Q
Sbjct: 231 SQ 232

[Close]
BLAST of MS014477 vs. TAIR 10
Match: AT1G69560.1 (myb domain protein 105 )

HSP 1 Score: 227.6 bits (579), Expect = 5.3e-60
Identity = 105/114 (92.11%), Postives = 110/114 (96.49%), Query Frame = 0 

Query: 6   ARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 65
           +RGHWRPAED KLKELVA+YGPQNWNLIA+KLQGRSGKSCRLRWFNQLDPRINRRAFTEE
Sbjct: 106 SRGHWRPAEDTKLKELVAVYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEE 165

Query: 66  EEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRK 120
           EEERLMQAHRLYGNKWA IARLFPGRTDN+VKNHWHVIMARK REQ S+YRRRK
Sbjct: 166 EEERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVIMARKFREQSSSYRRRK 219

[Close]
BLAST of MS014477 vs. TAIR 10
Match: AT1G26780.1 (myb domain protein 117 )

HSP 1 Score: 226.9 bits (577), Expect = 9.0e-60
Identity = 104/114 (91.23%), Postives = 109/114 (95.61%), Query Frame = 0 

Query: 7   RGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 66
           RGHWRPAED KLKELV++YGPQNWNLIA+KLQGRSGKSCRLRWFNQLDPRINRRAFTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 67  EERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 121
           EERLMQAHRLYGNKWA IARLFPGRTDN+VKNHWHV+MARK RE  SAYRRRKL
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKL 211

[Close]
BLAST of MS014477 vs. TAIR 10
Match: AT1G26780.2 (myb domain protein 117 )

HSP 1 Score: 226.9 bits (577), Expect = 9.0e-60
Identity = 104/114 (91.23%), Postives = 109/114 (95.61%), Query Frame = 0 

Query: 7   RGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 66
           RGHWRPAED KLKELV++YGPQNWNLIA+KLQGRSGKSCRLRWFNQLDPRINRRAFTEEE
Sbjct: 98  RGHWRPAEDVKLKELVSIYGPQNWNLIAEKLQGRSGKSCRLRWFNQLDPRINRRAFTEEE 157

Query: 67  EERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRRKL 121
           EERLMQAHRLYGNKWA IARLFPGRTDN+VKNHWHV+MARK RE  SAYRRRKL
Sbjct: 158 EERLMQAHRLYGNKWAMIARLFPGRTDNSVKNHWHVVMARKYREHSSAYRRRKL 211

[Close]
BLAST of MS014477 vs. TAIR 10
Match: AT5G17800.1 (myb domain protein 56 )

HSP 1 Score: 201.8 bits (512), Expect = 3.1e-52
Identity = 90/109 (82.57%), Postives = 100/109 (91.74%), Query Frame = 0 

Query: 2   SKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRA 61
           +K+C+RGHWRP EDAKLKELVA +GPQNWNLI++ L GRSGKSCRLRWFNQLDPRIN+RA
Sbjct: 88  TKVCSRGHWRPTEDAKLKELVAQFGPQNWNLISNHLLGRSGKSCRLRWFNQLDPRINKRA 147

Query: 62  FTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCRE 111
           FTEEEE RL+ AHR YGNKWA I+RLFPGRTDNAVKNHWHVIMAR+ RE
Sbjct: 148 FTEEEEFRLLAAHRAYGNKWALISRLFPGRTDNAVKNHWHVIMARRTRE 196

[Close]
BLAST of MS014477 vs. TAIR 10
Match: AT3G29020.1 (myb domain protein 110 )

HSP 1 Score: 193.7 bits (491), Expect = 8.4e-50
Identity = 84/117 (71.79%), Postives = 105/117 (89.74%), Query Frame = 0 

Query: 2   SKLCARGHWRPAEDAKLKELVALYGPQNWNLIADKLQGRSGKSCRLRWFNQLDPRINRRA 61
           S++C+RGHWR +ED +L ELV++YGPQNWN IA+ +QGR+GKSCRLRWFNQLDPRIN+RA
Sbjct: 60  SRVCSRGHWRISEDTQLMELVSVYGPQNWNHIAESMQGRTGKSCRLRWFNQLDPRINKRA 119

Query: 62  FTEEEEERLMQAHRLYGNKWACIARLFPGRTDNAVKNHWHVIMARKCREQFSAYRRR 119
           F++EEEERL+ AHR +GNKWA IA+LF GRTDNA+KNHWHV+MARK R+Q S+Y +R
Sbjct: 120 FSDEEEERLLAAHRAFGNKWAMIAKLFNGRTDNALKNHWHVLMARKMRQQSSSYVQR 176

The following BLAST results are available for this feature:
BLAST of MS014477 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022144460.12.7e-66100.00transcription factor MYB105-like, partial [Momordica charantia][more]
EXC19993.11.5e-6194.26Transcription factor [Morus notabilis][more]
POO03516.11.5e-6194.26MYB transcription factor [Trema orientale][more]
XP_010108682.21.5e-6194.26myb-related protein A [Morus notabilis][more]
PON54130.11.5e-6194.26MYB transcription factor [Parasponia andersonii][more]
BLAST of MS014477 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q5NBM87.4e-5988.24Transcription factor CSA OS=Oryza sativa subsp. japonica OX=39947 GN=CSA PE=2 SV... [more]
Q9SEZ47.4e-5992.11Transcription factor MYB105 OS=Arabidopsis thaliana OX=3702 GN=MYB105 PE=1 SV=1[more]
Q9LQX51.3e-5891.23Transcription factor MYB117 OS=Arabidopsis thaliana OX=3702 GN=MYB117 PE=2 SV=1[more]
Q6R0534.4e-5182.57Transcription factor MYB56 OS=Arabidopsis thaliana OX=3702 GN=MYB56 PE=1 SV=1[more]
Q9FX361.5e-4879.44Transcription factor MYB54 OS=Arabidopsis thaliana OX=3702 GN=MYB54 PE=1 SV=1[more]
BLAST of MS014477 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1CRP11.3e-66100.00transcription factor MYB105-like OS=Momordica charantia OX=3673 GN=LOC111014141 ... [more]
A0A2P5BZB27.4e-6294.26MYB transcription factor OS=Parasponia andersonii OX=3476 GN=PanMYB79 PE=4 SV=1[more]
W9S0B17.4e-6294.26Transcription factor OS=Morus notabilis OX=981085 GN=L484_015668 PE=4 SV=1[more]
A0A2P5G0F77.4e-6294.26MYB transcription factor OS=Trema orientale OX=63057 GN=TorMYB79 PE=4 SV=1[more]
A0A5B6WR159.7e-6294.26Myb-like protein B OS=Gossypium australe OX=47621 GN=mybl2 PE=4 SV=1[more]
BLAST of MS014477 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G69560.15.3e-6092.11myb domain protein 105 [more]
AT1G26780.19.0e-6091.23myb domain protein 117 [more]
AT1G26780.29.0e-6091.23myb domain protein 117 [more]
AT5G17800.13.1e-5282.57myb domain protein 56 [more]
AT3G29020.18.4e-5071.79myb domain protein 110 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001005SANT/Myb domainSMARTSM00717santcoord: 6..55
e-value: 2.9E-14
score: 63.4
coord: 58..106
e-value: 1.5E-13
score: 61.0
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 7..53
score: 10.348057
IPR001005SANT/Myb domainPROSITEPS50090MYB_LIKEcoord: 54..104
score: 9.767436
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 10..51
e-value: 5.45679E-12
score: 54.1186
IPR001005SANT/Myb domainCDDcd00167SANTcoord: 61..101
e-value: 8.42855E-10
score: 48.7258
NoneNo IPR availableGENE3D1.10.10.60coord: 7..58
e-value: 2.8E-23
score: 83.6
NoneNo IPR availableGENE3D1.10.10.60coord: 60..121
e-value: 2.4E-19
score: 71.1
NoneNo IPR availablePANTHERPTHR45614MYB PROTEIN-RELATEDcoord: 1..115
NoneNo IPR availablePANTHERPTHR45614:SF175TRANSCRIPTION FACTOR MYB105coord: 1..115
IPR017930Myb domainPFAMPF00249Myb_DNA-bindingcoord: 7..53
e-value: 1.5E-15
score: 57.1
coord: 59..102
e-value: 3.5E-16
score: 59.1
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 1..53
score: 19.981384
IPR017930Myb domainPROSITEPS51294HTH_MYBcoord: 54..108
score: 26.986103
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 7..100

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS014477.1MS014477.1mRNA