MS014468 (gene) Bitter gourd (TR) v1

Overview


Name	MS014468
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Mitochondrial transcription termination factor family protein
Location	scaffold553: 163954 .. 165242 (+)
RNA-Seq Expression	MS014468
Synteny	MS014468

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

TTAAAATTTCAGGAGAGGGGAGAAATATTCTTCTTCTACAGGCCTAAAGTTGAGAAGCAAGAGGCGCATAGCCCTGATGACGTGCAGCGATTCTACATTATCCTGCGCCCACACTCCGGTACCGGTGAGAGCTCCGGAACAACTGAAACTGAAGCTGGACATGGGGCCCACGCCCAGGTAAATTTAATTTAATTAATTAAATTTCTACACTTAGAATCTTAAAAAAAAAAAAGAAAAAGAGAAATAAGAAACGAATTTAGTTGCAGAATTCTGTAATTTCTTAAGAAAATTGTAACGGGACGTCACTAAATAATTGATGTGGTGGGAATGTATTTAGGAAGTGAAGACTGAAAAGGAACCCCTGTTTCGGTTCATCATCATGGGTCGAAAAAGGCTTCCGCACCCAGCCCGCAAGAGCCAACCCTACTGGGGATTTGTAGACATGGTCACAACCGACGTGCAACGTCTCAAAGCTGCTCTTCAACCACGTACGTCTTCTGTTCCAAATTCAACCTAAATATAAATATTTACCTCATCTCACCATAAAATATTTATTTAATAACTAATAAAACAGACGTTGTTTATACAAAATATAAAATTAATGAATTGTCCATTTTTCCTAAGAGAACACTGAATACGTTCGAATGAACTAGGTTAATTTTTCTTGAGAACAAAGATTTGACAACACATTATTTTTTTGTTTTTATATTTCTCTTTCTTAGTCGCATACGAGGAGTCCAGTTTTATTTTATTATTGTATGGCTCATGCAGAGGATTACGATACTTCAACGCGAGGGCATCGCCATGTTTCCGCCGCAAGAGCCGTGGGCGAAGGCGTTTACCGAATACTACGGCACAAGAAGGGCAACAACTATCACACTCACTTGATCTACAAGCTCGAGTTTCCTCGAGAAGAAGAGGAGGAGGAGGAGGAGAAGAACAACAACGAGGCTCAGAAGTCATTTAACATCGAAAGGGAAGGCTCGTTCATCATACAAATAAAGAACCCGGACCAAGGTGGATCTTCTAAGACCAAGCCGAAGCCGAAGCGCAGGGCTCGGTTTCCGGCGCGGTTGCAGGGCCAGTTTGGGTCGAGAGGGTACCACGCGGCGGACCCGCCCGAGTTCTTGAACTTCGAGGGGTGCGAGTTGTTGCTCATTTCGGCTTCGGACGATATAGAGGAGGAGTTGGGGGTGGAGGTGGAATGCGAGACTCGGCACTGTGATTTGGTGGAGACTTTTGGAGATACTGCTGTTTCCATGCAGCCACTTCTCAAAGGGACTTGGCTC

mRNA sequence

TTAAAATTTCAGGAGAGGGGAGAAATATTCTTCTTCTACAGGCCTAAAGTTGAGAAGCAAGAGGCGCATAGCCCTGATGACGTGCAGCGATTCTACATTATCCTGCGCCCACACTCCGGTACCGGTGAGAGCTCCGGAACAACTGAAACTGAAGCTGGACATGGGGCCCACGCCCAGGAAGTGAAGACTGAAAAGGAACCCCTGTTTCGGTTCATCATCATGGGTCGAAAAAGGCTTCCGCACCCAGCCCGCAAGAGCCAACCCTACTGGGGATTTGTAGACATGGTCACAACCGACGTGCAACGTCTCAAAGCTGCTCTTCAACCACAGGATTACGATACTTCAACGCGAGGGCATCGCCATGTTTCCGCCGCAAGAGCCGTGGGCGAAGGCGTTTACCGAATACTACGGCACAAGAAGGGCAACAACTATCACACTCACTTGATCTACAAGCTCGAGTTTCCTCGAGAAGAAGAGGAGGAGGAGGAGGAGAAGAACAACAACGAGGCTCAGAAGTCATTTAACATCGAAAGGGAAGGCTCGTTCATCATACAAATAAAGAACCCGGACCAAGGTGGATCTTCTAAGACCAAGCCGAAGCCGAAGCGCAGGGCTCGGTTTCCGGCGCGGTTGCAGGGCCAGTTTGGGTCGAGAGGGTACCACGCGGCGGACCCGCCCGAGTTCTTGAACTTCGAGGGGTGCGAGTTGTTGCTCATTTCGGCTTCGGACGATATAGAGGAGGAGTTGGGGGTGGAGGTGGAATGCGAGACTCGGCACTGTGATTTGGTGGAGACTTTTGGAGATACTGCTGTTTCCATGCAGCCACTTCTCAAAGGGACTTGGCTC

Coding sequence (CDS)

TTAAAATTTCAGGAGAGGGGAGAAATATTCTTCTTCTACAGGCCTAAAGTTGAGAAGCAAGAGGCGCATAGCCCTGATGACGTGCAGCGATTCTACATTATCCTGCGCCCACACTCCGGTACCGGTGAGAGCTCCGGAACAACTGAAACTGAAGCTGGACATGGGGCCCACGCCCAGGAAGTGAAGACTGAAAAGGAACCCCTGTTTCGGTTCATCATCATGGGTCGAAAAAGGCTTCCGCACCCAGCCCGCAAGAGCCAACCCTACTGGGGATTTGTAGACATGGTCACAACCGACGTGCAACGTCTCAAAGCTGCTCTTCAACCACAGGATTACGATACTTCAACGCGAGGGCATCGCCATGTTTCCGCCGCAAGAGCCGTGGGCGAAGGCGTTTACCGAATACTACGGCACAAGAAGGGCAACAACTATCACACTCACTTGATCTACAAGCTCGAGTTTCCTCGAGAAGAAGAGGAGGAGGAGGAGGAGAAGAACAACAACGAGGCTCAGAAGTCATTTAACATCGAAAGGGAAGGCTCGTTCATCATACAAATAAAGAACCCGGACCAAGGTGGATCTTCTAAGACCAAGCCGAAGCCGAAGCGCAGGGCTCGGTTTCCGGCGCGGTTGCAGGGCCAGTTTGGGTCGAGAGGGTACCACGCGGCGGACCCGCCCGAGTTCTTGAACTTCGAGGGGTGCGAGTTGTTGCTCATTTCGGCTTCGGACGATATAGAGGAGGAGTTGGGGGTGGAGGTGGAATGCGAGACTCGGCACTGTGATTTGGTGGAGACTTTTGGAGATACTGCTGTTTCCATGCAGCCACTTCTCAAAGGGACTTGGCTC

Protein sequence

LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQEVKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHRHVSAARAVGEGVYRILRHKKGNNYHTHLIYKLEFPREEEEEEEEKNNNEAQKSFNIEREGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGCELLLISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL

Homology

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BLAST of MS014468 vs. NCBI nr
Match: XP_038895444.1 (uncharacterized protein LOC120083676 [Benincasa hispida])

HSP 1 Score: 393.3 bits (1009), Expect = 1.8e-105
Identity = 197/289 (68.17%), Postives = 228/289 (78.89%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSG-------TGESSGTTETEAG 60
           ++ QERGEI+FFYRPKVEKQE HSPD+VQR YIILRP SG          SS +T T+ G
Sbjct: 15  VEIQERGEIYFFYRPKVEKQEVHSPDEVQRLYIILRPESGEKAVEEKQSTSSSSTGTQRG 74

Query: 61  HGAHAQEVKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYD 120
            G H QEV  EK+PL RFIIMGRK LPHPA++++PYWGFVDMVTTDVQ +K ALQ  +YD
Sbjct: 75  QGTHTQEVNIEKQPLLRFIIMGRKSLPHPAQRARPYWGFVDMVTTDVQDIKNALQGGEYD 134

Query: 121 TSTRGHRHVSAARAVGEGVYRILRHKKGNNYHTHLIYKLEFPREEEEEEEEKNNNEAQKS 180
           TSTRGHRH+SAARA+GEG+YRILRH   N YHTHLIYKLEFP E+E+       NE QK 
Sbjct: 135 TSTRGHRHISAARALGEGIYRILRHNPKNKYHTHLIYKLEFPSEDEK-------NEPQKW 194

Query: 181 FNIEREGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEG 240
           FNIEREGSF+IQIKNPDQGG+  +    KRRA+FPA LQGQFG +GYH ADPP++LNFEG
Sbjct: 195 FNIEREGSFVIQIKNPDQGGAGGS--HQKRRAQFPAHLQGQFGHKGYHPADPPDYLNFEG 254

Query: 241 CELLLISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           CE LLISASDDIEEELG+E+  E   CDLV+TFG+T V  +PL KGTW+
Sbjct: 255 CEFLLISASDDIEEELGLELTTEGEECDLVKTFGET-VPTEPLFKGTWV 293

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BLAST of MS014468 vs. NCBI nr
Match: XP_008444096.1 (PREDICTED: uncharacterized protein LOC103487535 [Cucumis melo] >KAA0064208.1 uncharacterized protein E6C27_scaffold548G001530 [Cucumis melo var. makuwa] >TYK02820.1 uncharacterized protein E5676_scaffold218G00100 [Cucumis melo var. makuwa])

HSP 1 Score: 377.5 bits (968), Expect = 1.0e-100
Identity = 190/284 (66.90%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQE 60
           ++ QERGEIFF YRPKVEKQE HSPD+VQR YIILRP SG          + G   H QE
Sbjct: 17  VEIQERGEIFFLYRPKVEKQEVHSPDEVQRLYIILRPLSGEKTVEEKQCKDGGQSTHTQE 76

Query: 61  VKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHR 120
           V  +K+PL RFIIMGRK LPHP+ +S+PYWGFVDMVTT+VQ +K ALQ ++YDTSTRGHR
Sbjct: 77  VNIKKQPLLRFIIMGRKSLPHPSHRSRPYWGFVDMVTTNVQEIKIALQGEEYDTSTRGHR 136

Query: 121 HVSAARAVGEGVYRILRH--KKGNNYHTHLIYKLEFPREEEEEEEEKNNNEAQKSFNIER 180
           H+SAARA+GEG+YRILRH  K  NN HTHLIYKLEFP  +E+       NE QKSFNIER
Sbjct: 137 HISAARALGEGIYRILRHNPKNKNNNHTHLIYKLEFPAADEK-------NEPQKSFNIER 196

Query: 181 EGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGCELLL 240
           EGSF+IQIKNP+QGG+  +  + KRRA+FPA LQGQFG + Y  ADPPEFLNFEGCE LL
Sbjct: 197 EGSFVIQIKNPEQGGAGGSSSQHKRRAQFPAHLQGQFGHKRYCPADPPEFLNFEGCEFLL 256

Query: 241 ISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           ISASDDIE+ELG+E+  E   CDLV+TFGD AVS +PL +GTW+
Sbjct: 257 ISASDDIEQELGLELFTEGEECDLVKTFGD-AVSTKPLFEGTWV 292

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BLAST of MS014468 vs. NCBI nr
Match: XP_031740485.1 (uncharacterized protein LOC101213393 [Cucumis sativus] >KAE8649641.1 hypothetical protein Csa_012091 [Cucumis sativus])

HSP 1 Score: 375.9 bits (964), Expect = 3.0e-100
Identity = 187/285 (65.61%), Postives = 222/285 (77.89%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQE 60
           ++ QERGEIFF YRPKV KQE H PD+VQR YIILRP SG         +  G   H QE
Sbjct: 17  VEIQERGEIFFLYRPKVGKQEVHGPDEVQRLYIILRPQSGEKTVEEKQCSYGGQSTHTQE 76

Query: 61  VKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHR 120
           V  E++PL RFIIMGRK LPHP+ +S+PYWGFVDMVTT+VQ +K ALQ ++YDTSTRGHR
Sbjct: 77  VNIEEQPLLRFIIMGRKSLPHPSHRSRPYWGFVDMVTTNVQDIKTALQGEEYDTSTRGHR 136

Query: 121 HVSAARAVGEGVYRILRH---KKGNNYHTHLIYKLEFPREEEEEEEEKNNNEAQKSFNIE 180
           H+SAARA+GEG+YRILRH    K NN+HTHLIYKL+FP  +E+       NE QKSFNIE
Sbjct: 137 HISAARALGEGIYRILRHNPRNKNNNHHTHLIYKLQFPAADEK-------NEPQKSFNIE 196

Query: 181 REGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGCELL 240
           REGSF+IQIKNP+QGG+  +  + KRRA+FPA LQGQFG + Y+ ADPPEFLNFEGCE L
Sbjct: 197 REGSFVIQIKNPEQGGAGGSSSQHKRRAQFPAHLQGQFGHKRYYPADPPEFLNFEGCEFL 256

Query: 241 LISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           LISASDDIE+ELG+E+  E   CDLV+TFGD AVS +PL +GTW+
Sbjct: 257 LISASDDIEQELGLELITEGEECDLVKTFGD-AVSTKPLFEGTWV 293

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BLAST of MS014468 vs. NCBI nr
Match: XP_023527021.1 (uncharacterized protein LOC111790369 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 351.3 bits (900), Expect = 7.8e-93
Identity = 180/282 (63.83%), Postives = 214/282 (75.89%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQE 60
           ++ QERGEIFFFYRPKV KQE H PD VQRFYIILRP SG   +    +      +  QE
Sbjct: 15  VEIQERGEIFFFYRPKVGKQEVHGPDHVQRFYIILRPESGE-RAVEEKQLPNASTSRTQE 74

Query: 61  VKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHR 120
           V  EK+PL RF+IMGRKRLP+PA+K +PYWGFVDMVTT+VQ +KAALQ  +Y+T TRGHR
Sbjct: 75  VNIEKQPLLRFMIMGRKRLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYETWTRGHR 134

Query: 121 HVSAARAVGEGVYRILRHKKGNNYHTHLIYKLEFPREEEEEEEEKNNNEAQKSFNIEREG 180
           H+SAARAVGEG+YR++RH K +  HTHLIYKLEFP E+EE       NE Q SFNI+REG
Sbjct: 135 HISAARAVGEGIYRLVRHNKADT-HTHLIYKLEFPSEDEE-------NEPQNSFNIQREG 194

Query: 181 SFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGCELLLIS 240
           SF+I IKNPD  G      + KRRA+FPA LQG+FG   +H ADPP++LNFEGCE LLIS
Sbjct: 195 SFLIMIKNPDVEGDGS---RNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGCEFLLIS 254

Query: 241 ASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           ASDDIE+ELG+E+      CDLV+TFG+T  S QPLLKGTW+
Sbjct: 255 ASDDIEQELGLELTAAPHECDLVKTFGET-TSTQPLLKGTWV 283

[Close]

BLAST of MS014468 vs. NCBI nr
Match: KAG6581755.1 (hypothetical protein SDJN03_21757, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 349.4 bits (895), Expect = 3.0e-92
Identity = 180/288 (62.50%), Postives = 215/288 (74.65%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQE 60
           ++ QERGEIFFFYRPKV KQ+ H PDDVQR YIILRP SG   +    +         QE
Sbjct: 15  VEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGE-RAVEEKQLPNASSRRTQE 74

Query: 61  VKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHR 120
           V  EK+PL RF+IMGRK LP+PA+K +PYWGFVDMVTT+VQ +KAALQ  +YD+STRGHR
Sbjct: 75  VNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHR 134

Query: 121 HVSAARAVGEGVYRILRHKKGN------NYHTHLIYKLEFPREEEEEEEEKNNNEAQKSF 180
           H+SAARAVGEG+YR++RHK+ +      +YHTHLIYKLEFP E+EE       NE Q SF
Sbjct: 135 HISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEE-------NEPQNSF 194

Query: 181 NIEREGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGC 240
           NI REGSF+I IKNPD  G      + KRRA+FPA LQG+FG   +H ADPP++LNFEGC
Sbjct: 195 NIGREGSFLIMIKNPDVEGDGS---RNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGC 254

Query: 241 ELLLISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           E LLISASDDIE+ELG+E+      CDLV+TFG+T  S QPLLKGTW+
Sbjct: 255 EFLLISASDDIEQELGLELTTAPHECDLVKTFGET-TSTQPLLKGTWV 290

[Close]

BLAST of MS014468 vs. ExPASy TrEMBL
Match: A0A5D3BUL8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold218G00100 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.9e-101
Identity = 190/284 (66.90%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQE 60
           ++ QERGEIFF YRPKVEKQE HSPD+VQR YIILRP SG          + G   H QE
Sbjct: 17  VEIQERGEIFFLYRPKVEKQEVHSPDEVQRLYIILRPLSGEKTVEEKQCKDGGQSTHTQE 76

Query: 61  VKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHR 120
           V  +K+PL RFIIMGRK LPHP+ +S+PYWGFVDMVTT+VQ +K ALQ ++YDTSTRGHR
Sbjct: 77  VNIKKQPLLRFIIMGRKSLPHPSHRSRPYWGFVDMVTTNVQEIKIALQGEEYDTSTRGHR 136

Query: 121 HVSAARAVGEGVYRILRH--KKGNNYHTHLIYKLEFPREEEEEEEEKNNNEAQKSFNIER 180
           H+SAARA+GEG+YRILRH  K  NN HTHLIYKLEFP  +E+       NE QKSFNIER
Sbjct: 137 HISAARALGEGIYRILRHNPKNKNNNHTHLIYKLEFPAADEK-------NEPQKSFNIER 196

Query: 181 EGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGCELLL 240
           EGSF+IQIKNP+QGG+  +  + KRRA+FPA LQGQFG + Y  ADPPEFLNFEGCE LL
Sbjct: 197 EGSFVIQIKNPEQGGAGGSSSQHKRRAQFPAHLQGQFGHKRYCPADPPEFLNFEGCEFLL 256

Query: 241 ISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           ISASDDIE+ELG+E+  E   CDLV+TFGD AVS +PL +GTW+
Sbjct: 257 ISASDDIEQELGLELFTEGEECDLVKTFGD-AVSTKPLFEGTWV 292

[Close]

BLAST of MS014468 vs. ExPASy TrEMBL
Match: A0A1S3B9M2 (uncharacterized protein LOC103487535 OS=Cucumis melo OX=3656 GN=LOC103487535 PE=4 SV=1)

HSP 1 Score: 377.5 bits (968), Expect = 4.9e-101
Identity = 190/284 (66.90%), Postives = 222/284 (78.17%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQE 60
           ++ QERGEIFF YRPKVEKQE HSPD+VQR YIILRP SG          + G   H QE
Sbjct: 17  VEIQERGEIFFLYRPKVEKQEVHSPDEVQRLYIILRPLSGEKTVEEKQCKDGGQSTHTQE 76

Query: 61  VKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHR 120
           V  +K+PL RFIIMGRK LPHP+ +S+PYWGFVDMVTT+VQ +K ALQ ++YDTSTRGHR
Sbjct: 77  VNIKKQPLLRFIIMGRKSLPHPSHRSRPYWGFVDMVTTNVQEIKIALQGEEYDTSTRGHR 136

Query: 121 HVSAARAVGEGVYRILRH--KKGNNYHTHLIYKLEFPREEEEEEEEKNNNEAQKSFNIER 180
           H+SAARA+GEG+YRILRH  K  NN HTHLIYKLEFP  +E+       NE QKSFNIER
Sbjct: 137 HISAARALGEGIYRILRHNPKNKNNNHTHLIYKLEFPAADEK-------NEPQKSFNIER 196

Query: 181 EGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGCELLL 240
           EGSF+IQIKNP+QGG+  +  + KRRA+FPA LQGQFG + Y  ADPPEFLNFEGCE LL
Sbjct: 197 EGSFVIQIKNPEQGGAGGSSSQHKRRAQFPAHLQGQFGHKRYCPADPPEFLNFEGCEFLL 256

Query: 241 ISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           ISASDDIE+ELG+E+  E   CDLV+TFGD AVS +PL +GTW+
Sbjct: 257 ISASDDIEQELGLELFTEGEECDLVKTFGD-AVSTKPLFEGTWV 292

[Close]

BLAST of MS014468 vs. ExPASy TrEMBL
Match: A0A6J1GXU8 (uncharacterized protein LOC111457833 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457833 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 7.1e-92
Identity = 179/288 (62.15%), Postives = 214/288 (74.31%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSGTGESSGTTETEAGHGAHAQE 60
           ++ QERGEIFFFYRPKV KQ+ H PDDVQR YIILRP SG   +    +         QE
Sbjct: 15  VEIQERGEIFFFYRPKVGKQQVHGPDDVQRLYIILRPESGE-RAVEEKQLPNASSRRTQE 74

Query: 61  VKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVTTDVQRLKAALQPQDYDTSTRGHR 120
           V  EK+PL RF+IMGRK LP+PA+K +PYWGFVDMVTT+VQ +KAALQ  +YD+STRGHR
Sbjct: 75  VNIEKQPLLRFMIMGRKSLPNPAQKRRPYWGFVDMVTTNVQDVKAALQEGEYDSSTRGHR 134

Query: 121 HVSAARAVGEGVYRILRHKKGN------NYHTHLIYKLEFPREEEEEEEEKNNNEAQKSF 180
           H+SAARAVGEG+YR++RHK+ +      +YHTHLIYKLEFP E+EE       NE Q SF
Sbjct: 135 HISAARAVGEGIYRLVRHKQPDTQKSKKSYHTHLIYKLEFPSEDEE-------NEPQNSF 194

Query: 181 NIEREGSFIIQIKNPDQGGSSKTKPKPKRRARFPARLQGQFGSRGYHAADPPEFLNFEGC 240
           NI REGSF+I IKNPD  G      + KRRA+FPA LQG+FG   +H ADPP++LNFEGC
Sbjct: 195 NIGREGSFLIMIKNPDVEGDGS---RNKRRAQFPAHLQGEFGHTRFHPADPPDYLNFEGC 254

Query: 241 ELLLISASDDIEEELGVEVECETRHCDLVETFGDTAVSMQPLLKGTWL 283
           E LLISASDDIE+ELG+E+      CDLV+ FG+T  S QPLLKGTW+
Sbjct: 255 EFLLISASDDIEQELGLELTTAPHECDLVKMFGET-TSTQPLLKGTWV 290

[Close]

BLAST of MS014468 vs. ExPASy TrEMBL
Match: A0A6J5UCV4 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18607 PE=4 SV=1)

HSP 1 Score: 337.8 bits (865), Expect = 4.3e-89
Identity = 185/316 (58.54%), Postives = 221/316 (69.94%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSG-------------------- 60
           ++ QERGEIFFFYRPKV K+EAHSPDDVQR YI+LRP SG                    
Sbjct: 15  VEIQERGEIFFFYRPKVNKEEAHSPDDVQRLYIVLRPESGERPIEEKQDPDSGKEGAKKK 74

Query: 61  ---TGE--SSGTTETEAGHGAHAQEVKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDM 120
              +GE  S G   +E GHG   QEV  EK+PL RFI+MGRK LP P++K +PYWGFV+M
Sbjct: 75  RPNSGEKGSGGGQSSEGGHG--RQEVNIEKQPLLRFIVMGRKSLPDPSKKGRPYWGFVEM 134

Query: 121 VTTDVQRLKAALQPQDYDTSTRGHRHVSAARAVGEGVYRILRHKKGNNY-HTHLIYKLEF 180
           VTT++  +K ALQ ++YDT T GHRH SAARA+GEG+YRI+RHK+G    HTHLIYKLEF
Sbjct: 135 VTTNIDDVKTALQGEEYDTKTEGHRHTSAARALGEGIYRIVRHKEGKKKPHTHLIYKLEF 194

Query: 181 PREEEEEEEEKNNNEAQKSFNIEREGSFIIQIKNPDQGGSSKTKP----KPKRRARFPAR 240
           P E+E       NNE Q+S NI+ EGSF IQIKNPDQ GSS T      +  RRA FPA 
Sbjct: 195 PPEDE-------NNEPQESLNIKHEGSFHIQIKNPDQHGSSSTSQFRGLQNNRRAMFPAH 254

Query: 241 LQGQFGSRGYHAADPPEFLNFEGCELLLISASDDIEEELGVEVECE---TRHC-DLVETF 283
           LQGQFG+  Y  ADPP+FLN+EGCE LLISASDDIEEELG+E++ E      C DL++TF
Sbjct: 255 LQGQFGNLRYCPADPPDFLNYEGCEFLLISASDDIEEELGLELQTEGEAVESCSDLIKTF 314

[Close]

BLAST of MS014468 vs. ExPASy TrEMBL
Match: A0A6A1W637 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G026110 PE=4 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 5.7e-89
Identity = 179/310 (57.74%), Postives = 225/310 (72.58%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPHSG-------------------- 60
           ++ QERGEIFFFYRPKV+K+E HS DDVQR YII+ P SG                    
Sbjct: 15  VEIQERGEIFFFYRPKVDKEEVHSADDVQRLYIIMWPESGERPVEEKQDPDSGKEGKKKG 74

Query: 61  --TGES-SGTTETEAGHGAHAQEVKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFVDMVT 120
             TGES SGT+ TE GHG  +QEV  EK+PLFRF+++G+KRLP P++K +PYWGFV+MVT
Sbjct: 75  SRTGESGSGTSGTEGGHG--SQEVNIEKQPLFRFMVIGKKRLPDPSKKGEPYWGFVEMVT 134

Query: 121 TDVQRLKAALQPQDYDTSTRGHRHVSAARAVGEGVYRILRHKKGNNYHTHLIYKLEFPRE 180
           T++  +K AL+ ++YDTSTRG RH  +ARA+GEG+YRI+RHK G   HTHL+YKLEFP+E
Sbjct: 135 TNIDDVKNALKEEEYDTSTRGRRHRPSARALGEGIYRIVRHKAGRRTHTHLVYKLEFPQE 194

Query: 181 EEEEEEEKNNNEAQKSFNIEREGSFIIQIKNPDQ-GGSSKTKPKPKRRARFPARLQGQFG 240
           E         NE+Q+SFNIEREGSF+IQIKNP+Q  GS     + KR+A FPA LQ + G
Sbjct: 195 E---------NESQESFNIEREGSFVIQIKNPEQHDGSQSRGVQNKRKATFPAHLQARLG 254

Query: 241 SRGYHAADPPEFLNFEGCELLLISASDDIEEELGVEV----ECETRHC-DLVETFGDTAV 282
            R +  ADPP+FLN++GCE LLISASD+IEEELG+E+    EC    C DLV+TFGD+A 
Sbjct: 255 QRRFCPADPPDFLNYDGCEFLLISASDNIEEELGLELEPEAECSDPSCSDLVKTFGDSA- 312

[Close]

BLAST of MS014468 vs. TAIR 10
Match: AT1G16770.1 (unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 71; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 308.5 bits (789), Expect = 5.4e-84
Identity = 168/317 (53.00%), Postives = 216/317 (68.14%), Query Frame = 0


Query: 1   LKFQERGEIFFFYRPKVEKQEAHSPDDVQRFYIILRPH---------------------- 60
           ++ QERGEIFFFYRPKV K+EAHS DDVQR YI++RP                       
Sbjct: 15  VEIQERGEIFFFYRPKVNKEEAHSVDDVQRLYIVMRPESGENPTEEKQDPLSGKEGSDKD 74

Query: 61  SGTGESSGTT-----ETEAGHGAHAQEVKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFV 120
           SG GE+SG++     + E GHG   ++V  EK+ L RFI+MG+K LP P++KSQP+WGFV
Sbjct: 75  SGDGEASGSSSGAKNQGEGGHG--VEKVNIEKQLLLRFIVMGKKSLPDPSKKSQPFWGFV 134

Query: 121 DMVTTDVQRLKAALQPQDYDTSTRGHRHVSAARAVGEGVYRILRHKKG--NNYHTHLIYK 180
           +MVTT+V+ +K AL+ ++Y+T TRGHRH   ARAVGEG+YRILRHK      +HTHL+YK
Sbjct: 135 EMVTTNVEDVKNALKGEEYETKTRGHRHKPPARAVGEGIYRILRHKPNPTRKHHTHLVYK 194

Query: 181 LEFPREEEEEEEEKNNNEAQKSFNIEREGSFIIQIKNPDQGGSSKT---KPKPKRRARFP 240
           LEFP   +  E     +E Q+S NIE EGSF+IQI+NP+QGG  ++     + KR+A+FP
Sbjct: 195 LEFPSVSQTRE-----HEPQESLNIEPEGSFLIQIRNPEQGGGGRSGFGGLQRKRKAQFP 254

Query: 241 ARLQGQFGSRGYHAADPPEFLNFEGCELLLISASDDIEEELGVEVE----CETRHCDLVE 282
             +Q   G   +  ADPP+FLN+EGCELLLISASDDIEEELG+E+E     E   CDL++
Sbjct: 255 VHIQAHLGHTRFGPADPPDFLNYEGCELLLISASDDIEEELGMELEPEGDGEESTCDLLK 314

[Close]

BLAST of MS014468 vs. TAIR 10
Match: AT1G16770.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 103 Blast hits to 103 proteins in 50 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 65; Plants - 32; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). )

HSP 1 Score: 260.4 bits (664), Expect = 1.7e-69
Identity = 140/257 (54.47%), Postives = 183/257 (71.21%), Query Frame = 0


Query: 39  SGTGESSGTT-----ETEAGHGAHAQEVKTEKEPLFRFIIMGRKRLPHPARKSQPYWGFV 98
           SG GE+SG++     + E GHG   ++V  EK+ L RFI+MG+K LP P++KSQP+WGFV
Sbjct: 27  SGDGEASGSSSGAKNQGEGGHG--VEKVNIEKQLLLRFIVMGKKSLPDPSKKSQPFWGFV 86

Query: 99  DMVTTDVQRLKAALQPQDYDTSTRGHRHVSAARAVGEGVYRILRHKKG--NNYHTHLIYK 158
           +MVTT+V+ +K AL+ ++Y+T TRGHRH   ARAVGEG+YRILRHK      +HTHL+YK
Sbjct: 87  EMVTTNVEDVKNALKGEEYETKTRGHRHKPPARAVGEGIYRILRHKPNPTRKHHTHLVYK 146

Query: 159 LEFPREEEEEEEEKNNNEAQKSFNIEREGSFIIQIKNPDQGGSSKT---KPKPKRRARFP 218
           LEFP   +  E     +E Q+S NIE EGSF+IQI+NP+QGG  ++     + KR+A+FP
Sbjct: 147 LEFPSVSQTRE-----HEPQESLNIEPEGSFLIQIRNPEQGGGGRSGFGGLQRKRKAQFP 206

Query: 219 ARLQGQFGSRGYHAADPPEFLNFEGCELLLISASDDIEEELGVEVE----CETRHCDLVE 278
             +Q   G   +  ADPP+FLN+EGCELLLISASDDIEEELG+E+E     E   CDL++
Sbjct: 207 VHIQAHLGHTRFGPADPPDFLNYEGCELLLISASDDIEEELGMELEPEGDGEESTCDLLK 266

Query: 279 TFGDTAVSMQPLLKGTW 282
           TFGD  V   PLL+GTW
Sbjct: 267 TFGDD-VEATPLLRGTW 275

The following BLAST results are available for this feature:

BLAST of MS014468 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038895444.1	1.8e-105	68.17	uncharacterized protein LOC120083676 [Benincasa hispida]	[more]
XP_008444096.1	1.0e-100	66.90	PREDICTED: uncharacterized protein LOC103487535 [Cucumis melo] >KAA0064208.1 unc...	[more]
XP_031740485.1	3.0e-100	65.61	uncharacterized protein LOC101213393 [Cucumis sativus] >KAE8649641.1 hypothetica...	[more]
XP_023527021.1	7.8e-93	63.83	uncharacterized protein LOC111790369 [Cucurbita pepo subsp. pepo]	[more]
KAG6581755.1	3.0e-92	62.50	hypothetical protein SDJN03_21757, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS014468 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS014468 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BUL8	4.9e-101	66.90	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B9M2	4.9e-101	66.90	uncharacterized protein LOC103487535 OS=Cucumis melo OX=3656 GN=LOC103487535 PE=...	[more]
A0A6J1GXU8	7.1e-92	62.15	uncharacterized protein LOC111457833 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J5UCV4	4.3e-89	58.54	Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS18607 PE=4 S...	[more]
A0A6A1W637	5.7e-89	57.74	Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G026110 PE=4 SV=1	[more]

BLAST of MS014468 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G16770.1	5.4e-84	53.00	unknown protein; Has 109 Blast hits to 109 proteins in 52 species: Archae - 0; B...	[more]
AT1G16770.2	1.7e-69	54.47	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..174
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..60
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..205
None	No IPR available	PANTHER	PTHR34776	F17F16.3 PROTEIN	coord: 3..281

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014468.1	MS014468.1	mRNA