MS014282 (gene) Bitter gourd (TR) v1

Overview


Name	MS014282
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Forkhead box protein G1
Location	scaffold5: 1860596 .. 1860931 (-)
RNA-Seq Expression	MS014282
Synteny	MS014282

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCATCTCCTTCCTCCGATTCTCTCTCTATCCGCCGCATTGTCTCACCGCCGCCAAGTGGACGGCGCTCCTGACGCTAACTGCAGCCGTGGCCTCGTTCGCTCCGGAGTTCATATTCACCAATGCGACGTCGCTTTCGTCGTCGTTCTCCAAATCCTGCCGCCGAGACGGCTACATCAGGATCCCGCTGGACCTCCCCGGAGATGTTCTGTGCTTGCCGGCGAAAATGGTGACCCGCTCCAGTTTGGATTTCTTCGTCCCTACCGTATTCGCTGCTCTCGGCGTCGGCGTTTCGGTTTGCTTCGTTCGATCCTTTGGATTGTTGGAGAACGCC

mRNA sequence

ATGGCCATCTCCTTCCTCCGATTCTCTCTCTATCCGCCGCATTGTCTCACCGCCGCCAAGTGGACGGCGCTCCTGACGCTAACTGCAGCCGTGGCCTCGTTCGCTCCGGAGTTCATATTCACCAATGCGACGTCGCTTTCGTCGTCGTTCTCCAAATCCTGCCGCCGAGACGGCTACATCAGGATCCCGCTGGACCTCCCCGGAGATGTTCTGTGCTTGCCGGCGAAAATGGTGACCCGCTCCAGTTTGGATTTCTTCGTCCCTACCGTATTCGCTGCTCTCGGCGTCGGCGTTTCGGTTTGCTTCGTTCGATCCTTTGGATTGTTGGAGAACGCC

Coding sequence (CDS)

ATGGCCATCTCCTTCCTCCGATTCTCTCTCTATCCGCCGCATTGTCTCACCGCCGCCAAGTGGACGGCGCTCCTGACGCTAACTGCAGCCGTGGCCTCGTTCGCTCCGGAGTTCATATTCACCAATGCGACGTCGCTTTCGTCGTCGTTCTCCAAATCCTGCCGCCGAGACGGCTACATCAGGATCCCGCTGGACCTCCCCGGAGATGTTCTGTGCTTGCCGGCGAAAATGGTGACCCGCTCCAGTTTGGATTTCTTCGTCCCTACCGTATTCGCTGCTCTCGGCGTCGGCGTTTCGGTTTGCTTCGTTCGATCCTTTGGATTGTTGGAGAACGCC

Protein sequence

MAISFLRFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYIRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA

Homology

[Close]

BLAST of MS014282 vs. NCBI nr
Match: XP_022148378.1 (uncharacterized protein LOC111017044 [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 4.9e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAISFLRFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYI 60
           MAISFLRFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYI
Sbjct: 12  MAISFLRFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYI 71

Query: 61  RIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA 113
           RIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA
Sbjct: 72  RIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA 123

[Close]

BLAST of MS014282 vs. NCBI nr
Match: KAG6570723.1 (hypothetical protein SDJN03_29638, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.4 bits (485), Expect = 4.1e-45
Identity = 100/113 (88.50%), Postives = 104/113 (92.04%), Query Frame = 0


Query: 1   MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 60
           MAIS L RFSLYPP CLTAAKWTALLTLTAAVASFAP F+FTNATSLSSSFSKSC RDGY
Sbjct: 1   MAISILHRFSLYPPLCLTAAKWTALLTLTAAVASFAPVFMFTNATSLSSSFSKSCGRDGY 60

Query: 61  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA 113
           IRIPLDLPGDVLC+PAKMV RS+LDFFVPTVFAALGVGVS CFVRS GL EN+
Sbjct: 61  IRIPLDLPGDVLCVPAKMVNRSNLDFFVPTVFAALGVGVSACFVRSVGLWENS 113

[Close]

BLAST of MS014282 vs. NCBI nr
Match: XP_008448381.1 (PREDICTED: uncharacterized protein LOC103490587 [Cucumis melo] >KAA0061944.1 forkhead box protein G1 [Cucumis melo var. makuwa] >TYK23985.1 forkhead box protein G1 [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-44
Identity = 99/111 (89.19%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 60
           M ISFL RFSL PPHC TAAKWTALLTLTAAVASFAPEFIF NATSL SSFS+SCRRDGY
Sbjct: 1   MPISFLHRFSLDPPHCRTAAKWTALLTLTAAVASFAPEFIFANATSLHSSFSRSCRRDGY 60

Query: 61  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLE 111
           IRIPLDLPGDVLCLPA MV RSSLDFFVPTVFAALGVGVS CFVRS GL E
Sbjct: 61  IRIPLDLPGDVLCLPANMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

[Close]

BLAST of MS014282 vs. NCBI nr
Match: XP_038900397.1 (uncharacterized protein LOC120087630 [Benincasa hispida])

HSP 1 Score: 188.0 bits (476), Expect = 4.6e-44
Identity = 99/111 (89.19%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 60
           M ISFL RFSL PPHC +AAKWTALL LTAAVASFAPEFIFTNATS  SSFSKSCRRDGY
Sbjct: 1   MPISFLHRFSLDPPHCRSAAKWTALLALTAAVASFAPEFIFTNATSPHSSFSKSCRRDGY 60

Query: 61  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLE 111
           IRIPLDLPGDVLCLPAKMV RSSLDFFVPTVFAALGVGVS CFVRS GL E
Sbjct: 61  IRIPLDLPGDVLCLPAKMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

[Close]

BLAST of MS014282 vs. NCBI nr
Match: XP_031742493.1 (uncharacterized protein LOC105435838 [Cucumis sativus])

HSP 1 Score: 177.9 bits (450), Expect = 4.7e-41
Identity = 94/109 (86.24%), Postives = 96/109 (88.07%), Query Frame = 0


Query: 1   MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 60
           MAISFL RFSL P HC +AAKWTALLTLTAAV SFAPEFIFTNATSL SSFS+SC RDGY
Sbjct: 1   MAISFLHRFSLDPQHCRSAAKWTALLTLTAAVTSFAPEFIFTNATSLHSSFSRSCGRDGY 60

Query: 61  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGL 109
           IRIPLDLPGDVLCLPA MV  SS DFFVPTVFAALGVGVS CFVRS GL
Sbjct: 61  IRIPLDLPGDVLCLPANMVNWSSFDFFVPTVFAALGVGVSACFVRSLGL 109

[Close]

BLAST of MS014282 vs. ExPASy TrEMBL
Match: A0A6J1D3X8 (uncharacterized protein LOC111017044 OS=Momordica charantia OX=3673 GN=LOC111017044 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.3e-54
Identity = 112/112 (100.00%), Postives = 112/112 (100.00%), Query Frame = 0


Query: 1   MAISFLRFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYI 60
           MAISFLRFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYI
Sbjct: 12  MAISFLRFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYI 71

Query: 61  RIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA 113
           RIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA
Sbjct: 72  RIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLENA 123

[Close]

BLAST of MS014282 vs. ExPASy TrEMBL
Match: A0A5A7V3R2 (Forkhead box protein G1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00490 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.9e-45
Identity = 99/111 (89.19%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 60
           M ISFL RFSL PPHC TAAKWTALLTLTAAVASFAPEFIF NATSL SSFS+SCRRDGY
Sbjct: 1   MPISFLHRFSLDPPHCRTAAKWTALLTLTAAVASFAPEFIFANATSLHSSFSRSCRRDGY 60

Query: 61  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLE 111
           IRIPLDLPGDVLCLPA MV RSSLDFFVPTVFAALGVGVS CFVRS GL E
Sbjct: 61  IRIPLDLPGDVLCLPANMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

[Close]

BLAST of MS014282 vs. ExPASy TrEMBL
Match: A0A1S3BKF6 (uncharacterized protein LOC103490587 OS=Cucumis melo OX=3656 GN=LOC103490587 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.9e-45
Identity = 99/111 (89.19%), Postives = 100/111 (90.09%), Query Frame = 0


Query: 1   MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 60
           M ISFL RFSL PPHC TAAKWTALLTLTAAVASFAPEFIF NATSL SSFS+SCRRDGY
Sbjct: 1   MPISFLHRFSLDPPHCRTAAKWTALLTLTAAVASFAPEFIFANATSLHSSFSRSCRRDGY 60

Query: 61  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLE 111
           IRIPLDLPGDVLCLPA MV RSSLDFFVPTVFAALGVGVS CFVRS GL E
Sbjct: 61  IRIPLDLPGDVLCLPANMVNRSSLDFFVPTVFAALGVGVSACFVRSLGLWE 111

[Close]

BLAST of MS014282 vs. ExPASy TrEMBL
Match: A0A0A0KEV4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303790 PE=4 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 2.3e-41
Identity = 94/109 (86.24%), Postives = 96/109 (88.07%), Query Frame = 0


Query: 1   MAISFL-RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGY 60
           MAISFL RFSL P HC +AAKWTALLTLTAAV SFAPEFIFTNATSL SSFS+SC RDGY
Sbjct: 1   MAISFLHRFSLDPQHCRSAAKWTALLTLTAAVTSFAPEFIFTNATSLHSSFSRSCGRDGY 60

Query: 61  IRIPLDLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGL 109
           IRIPLDLPGDVLCLPA MV  SS DFFVPTVFAALGVGVS CFVRS GL
Sbjct: 61  IRIPLDLPGDVLCLPANMVNWSSFDFFVPTVFAALGVGVSACFVRSLGL 109

[Close]

BLAST of MS014282 vs. ExPASy TrEMBL
Match: A0A2I4EV00 (uncharacterized protein LOC108992958 OS=Juglans regia OX=51240 GN=LOC108992958 PE=4 SV=1)

HSP 1 Score: 125.6 bits (314), Expect = 1.3e-25
Identity = 65/99 (65.66%), Postives = 73/99 (73.74%), Query Frame = 0


Query: 13  PHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYIRIPLDLPGDVLC 72
           P  L AA WT LLTLT AVASFAPE  F +A S SSSFSKSC  DG++RIPLD P +V+C
Sbjct: 18  PLLLCAATWTVLLTLTVAVASFAPEIAFVSAISPSSSFSKSCHADGFVRIPLDNPMEVMC 77

Query: 73  LPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLEN 112
            PA +V RS LDFF+PTVFAAL V  S C VRS GL E+
Sbjct: 78  FPAHLVRRSKLDFFLPTVFAALVVACSACMVRSLGLWES 116

[Close]

BLAST of MS014282 vs. TAIR 10
Match: AT2G37530.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 39 Blast hits to 39 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 53/106 (50.00%), Postives = 65/106 (61.32%), Query Frame = 0


Query: 7   RFSLYPPHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSS--FSKSCRRDGYIRIPL 66
           RF+   PH +  A WT  LTLT A+ S APEF F +A   SSS  FS+ C     I +PL
Sbjct: 12  RFAWRIPHFVYGATWTLFLTLTVAIISLAPEFAFVSAIFPSSSEVFSRRCGSYAAILVPL 71

Query: 67  DLPGDVLCLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRSFGLLE 111
           DLP +VLCLPA +  RS +D  VP VFAA+ V +S   VR+ GL E
Sbjct: 72  DLPSEVLCLPANLFRRSKMDLVVPPVFAAIVVALSAVVVRTMGLWE 117

[Close]

BLAST of MS014282 vs. TAIR 10
Match: AT1G07795.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G28725.1); Has 38 Blast hits to 38 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 84.0 bits (206), Expect = 8.6e-17
Identity = 45/94 (47.87%), Postives = 58/94 (61.70%), Query Frame = 0


Query: 13  PHCLTAAKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSC-RRDGYIRIPLDLPGDVL 72
           P    AA WT LL  T AVASFAPE  F       S+ S SC   DG+++IP+D  G+ +
Sbjct: 21  PVIAQAATWTVLLMFTVAVASFAPEMAFV------STVSSSCGGGDGFVKIPMDFAGESI 80

Query: 73  CLPAKMVTRSSLDFFVPTVFAALGVGVSVCFVRS 106
           C+P+ MV RS  D FVP++FAA+ V  S C +RS
Sbjct: 81  CVPSNMVKRSRFDLFVPSIFAAVMVTASACLIRS 108

[Close]

BLAST of MS014282 vs. TAIR 10
Match: AT2G28725.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07795.1); Has 35 Blast hits to 35 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 80.1 bits (196), Expect = 1.2e-15
Identity = 45/91 (49.45%), Postives = 60/91 (65.93%), Query Frame = 0


Query: 19  AKWTALLTLTAAVASFAPEFIFTNATSLSSSFSKSCRRDGYIRIPLDLPGDVLCLPAKMV 78
           A WT LL +T A+ASFAPE  F +    SS        DG++RIP+DLPG++L LP++MV
Sbjct: 19  ATWTILLMITVALASFAPEMAFVSKLKSSS--------DGFVRIPMDLPGEMLILPSEMV 78

Query: 79  TRSSLDFFVPTVFAALGVGVSVCFVRS-FGL 109
             S LD F+PT+FA + V  SV  +RS FG+
Sbjct: 79  KNSYLDVFLPTIFAGVMVIASVSLLRSCFGI 101

The following BLAST results are available for this feature:

BLAST of MS014282 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148378.1	4.9e-54	100.00	uncharacterized protein LOC111017044 [Momordica charantia]	[more]
KAG6570723.1	4.1e-45	88.50	hypothetical protein SDJN03_29638, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_008448381.1	2.0e-44	89.19	PREDICTED: uncharacterized protein LOC103490587 [Cucumis melo] >KAA0061944.1 for...	[more]
XP_038900397.1	4.6e-44	89.19	uncharacterized protein LOC120087630 [Benincasa hispida]	[more]
XP_031742493.1	4.7e-41	86.24	uncharacterized protein LOC105435838 [Cucumis sativus]	[more]

BLAST of MS014282 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS014282 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3X8	2.3e-54	100.00	uncharacterized protein LOC111017044 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A5A7V3R2	9.9e-45	89.19	Forkhead box protein G1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BKF6	9.9e-45	89.19	uncharacterized protein LOC103490587 OS=Cucumis melo OX=3656 GN=LOC103490587 PE=...	[more]
A0A0A0KEV4	2.3e-41	86.24	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G303790 PE=4 SV=1	[more]
A0A2I4EV00	1.3e-25	65.66	uncharacterized protein LOC108992958 OS=Juglans regia OX=51240 GN=LOC108992958 P...	[more]

BLAST of MS014282 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37530.1	1.1e-19	50.00	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G07795.1	8.6e-17	47.87	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT2G28725.1	1.2e-15	49.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34658	OS01G0151800 PROTEIN	coord: 5..111
None	No IPR available	PANTHER	PTHR34658:SF5	BNACNNG38900D PROTEIN	coord: 5..111

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014282.1	MS014282.1	mRNA