MS014265 (gene) Bitter gourd (TR) v1

Overview


Name	MS014265
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Actin
Location	scaffold5: 1767464 .. 1768076 (-)
RNA-Seq Expression	MS014265
Synteny	MS014265

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GAACGTTTTCGCTGTCCTGAAGTTCTTTTCCAGCCTTCAATGATTGGAATGGAAGCTGCAGGCATCCACGAAACAACATATAACTCCATCATGAAATGTGATGTCGACATCAGAAAGGATTTGTATGGAAACATTGTTCTTAGTGGTGGATCAACCATGTTCCCAGGCATTGCTGACCGAATGAGCAAAGAAATAACTGCGTTGGCTCCCAGCAGCATGAAAATAAAAGTGGTAGCACCACCTGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCCATTTTGGCATCACTCAGCACGTTTCAGCAGGTATATGTTGTGTTGATGTTGATAAATTCTATAGTTTCTTGCTGTCAGCAATAATTTGTTATTTAACATGCTTATGGAAATCACTCTCACATATAGGCTTAGCAAGTTAAAAAGTGGCTAAAAAATTTAGACTTGGCAATATTTATTGAAGGGTGAAAAGTATCTTTTGAAATCAGTTTTTTTCAAAAGCCATGTCGCTGGAAATTTTGAGTGCAATGTTAATAATTTAAAATATGGACTGCAGATGTGGATCGCAAAGGCAGAGTATGATGAGTCTGGTCCATCCATTGTGCACAGGAAATGCTTC

mRNA sequence

GAACGTTTTCGCTGTCCTGAAGTTCTTTTCCAGCCTTCAATGATTGGAATGGAAGCTGCAGGCATCCACGAAACAACATATAACTCCATCATGAAATGTGATGTCGACATCAGAAAGGATTTGTATGGAAACATTGTTCTTAGTGGTGGATCAACCATGTTCCCAGGCATTGCTGACCGAATGAGCAAAGAAATAACTGCGTTGGCTCCCAGCAGCATGAAAATAAAAGTGGTAGCACCACCTGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCCATTTTGGCATCACTCAGCACGTTTCAGCAGATGTGGATCGCAAAGGCAGAGTATGATGAGTCTGGTCCATCCATTGTGCACAGGAAATGCTTC

Coding sequence (CDS)

GAACGTTTTCGCTGTCCTGAAGTTCTTTTCCAGCCTTCAATGATTGGAATGGAAGCTGCAGGCATCCACGAAACAACATATAACTCCATCATGAAATGTGATGTCGACATCAGAAAGGATTTGTATGGAAACATTGTTCTTAGTGGTGGATCAACCATGTTCCCAGGCATTGCTGACCGAATGAGCAAAGAAATAACTGCGTTGGCTCCCAGCAGCATGAAAATAAAAGTGGTAGCACCACCTGAAAGAAAGTACAGTGTCTGGATTGGTGGCTCCATTTTGGCATCACTCAGCACGTTTCAGCAGATGTGGATCGCAAAGGCAGAGTATGATGAGTCTGGTCCATCCATTGTGCACAGGAAATGCTTC

Protein sequence

ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHRKCF

Homology

[Close]

BLAST of MS014265 vs. NCBI nr
Match: XP_020272727.1 (actin-66-like [Asparagus officinalis])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 282 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 341

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 342 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 401

Query: 121 KCF 124
           KCF
Sbjct: 402 KCF 404

[Close]

BLAST of MS014265 vs. NCBI nr
Match: XP_004304361.1 (PREDICTED: actin-like [Fragaria vesca subsp. vesca] >XP_011468046.1 PREDICTED: actin-like [Fragaria vesca subsp. vesca])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. NCBI nr
Match: CAN69147.1 (hypothetical protein VITISV_023982 [Vitis vinifera])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 254 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 313

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 314 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 373

Query: 121 KCF 124
           KCF
Sbjct: 374 KCF 376

[Close]

BLAST of MS014265 vs. NCBI nr
Match: KAG8367948.1 (hypothetical protein BUALT_Bualt16G0125700 [Buddleja alternifolia])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. NCBI nr
Match: XP_008241048.1 (PREDICTED: actin [Prunus mume] >XP_021819061.1 actin [Prunus avium] >XP_034219634.1 actin [Prunus dulcis] >XP_034219635.1 actin [Prunus dulcis] >CAB4284493.1 unnamed protein product [Prunus armeniaca] >CAB4314909.1 unnamed protein product [Prunus armeniaca] >VVA22626.1 PREDICTED: actin [Prunus dulcis])

HSP 1 Score: 255.8 bits (652), Expect = 2.0e-64
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy Swiss-Prot
Match: P30171 (Actin-97 OS=Solanum tuberosum OX=4113 GN=AC97 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 5.7e-67
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy Swiss-Prot
Match: O81221 (Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 5.7e-67
Identity = 122/123 (99.19%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy Swiss-Prot
Match: Q05214 (Actin OS=Nicotiana tabacum OX=4097 PE=3 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 1.3e-66
Identity = 122/123 (99.19%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG IVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGKIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy Swiss-Prot
Match: P53496 (Actin-11 OS=Arabidopsis thaliana OX=3702 GN=ACT11 PE=1 SV=1)

HSP 1 Score: 253.1 bits (645), Expect = 1.7e-66
Identity = 120/123 (97.56%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy Swiss-Prot
Match: A2XLF2 (Actin-1 OS=Oryza sativa subsp. indica OX=39946 GN=ACT1 PE=2 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 2.2e-66
Identity = 121/123 (98.37%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPS IGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy TrEMBL
Match: A0A1U7WH08 (actin OS=Nicotiana sylvestris OX=4096 GN=LOC104224064 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.5e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy TrEMBL
Match: M5XJX2 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G235000 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.5e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy TrEMBL
Match: M5VWV3 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G077300 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.5e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy TrEMBL
Match: M5VYQ8 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G254100 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.5e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. ExPASy TrEMBL
Match: A0A4Y7L409 (Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_003478 PE=3 SV=1)

HSP 1 Score: 255.8 bits (652), Expect = 9.5e-65
Identity = 123/123 (100.00%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. TAIR 10
Match: AT3G12110.1 (actin-11 )

HSP 1 Score: 253.1 bits (645), Expect = 1.2e-67
Identity = 120/123 (97.56%), Postives = 123/123 (100.00%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. TAIR 10
Match: AT2G37620.1 (actin 1 )

HSP 1 Score: 251.1 bits (640), Expect = 4.5e-67
Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. TAIR 10
Match: AT2G37620.2 (actin 1 )

HSP 1 Score: 251.1 bits (640), Expect = 4.5e-67
Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. TAIR 10
Match: AT3G53750.1 (actin 3 )

HSP 1 Score: 251.1 bits (640), Expect = 4.5e-67
Identity = 120/123 (97.56%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVL+QPSMIGME AGIHETTYNSIMKCDVDIRKDLYGNIVLSGG+TMFPGIADR
Sbjct: 255 ERFRCPEVLYQPSMIGMENAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGTTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

[Close]

BLAST of MS014265 vs. TAIR 10
Match: AT5G09810.1 (actin 7 )

HSP 1 Score: 250.4 bits (638), Expect = 7.6e-67
Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0


Query: 1   ERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 60
           ERFRCPEVLFQPS+IGMEA GIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR
Sbjct: 255 ERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYGNIVLSGGSTMFPGIADR 314

Query: 61  MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIAKAEYDESGPSIVHR 120
           MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWI+K+EYDESGPSIVHR
Sbjct: 315 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKSEYDESGPSIVHR 374

Query: 121 KCF 124
           KCF
Sbjct: 375 KCF 377

The following BLAST results are available for this feature:

BLAST of MS014265 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_020272727.1	2.0e-64	100.00	actin-66-like [Asparagus officinalis]	[more]
XP_004304361.1	2.0e-64	100.00	PREDICTED: actin-like [Fragaria vesca subsp. vesca] >XP_011468046.1 PREDICTED: a...	[more]
CAN69147.1	2.0e-64	100.00	hypothetical protein VITISV_023982 [Vitis vinifera]	[more]
KAG8367948.1	2.0e-64	100.00	hypothetical protein BUALT_Bualt16G0125700 [Buddleja alternifolia]	[more]
XP_008241048.1	2.0e-64	100.00	PREDICTED: actin [Prunus mume] >XP_021819061.1 actin [Prunus avium] >XP_03421963...	[more]

BLAST of MS014265 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30171	5.7e-67	99.19	Actin-97 OS=Solanum tuberosum OX=4113 GN=AC97 PE=3 SV=1	[more]
O81221	5.7e-67	99.19	Actin OS=Gossypium hirsutum OX=3635 PE=3 SV=1	[more]
Q05214	1.3e-66	99.19	Actin OS=Nicotiana tabacum OX=4097 PE=3 SV=1	[more]
P53496	1.7e-66	97.56	Actin-11 OS=Arabidopsis thaliana OX=3702 GN=ACT11 PE=1 SV=1	[more]
A2XLF2	2.2e-66	98.37	Actin-1 OS=Oryza sativa subsp. indica OX=39946 GN=ACT1 PE=2 SV=1	[more]

BLAST of MS014265 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1U7WH08	9.5e-65	100.00	actin OS=Nicotiana sylvestris OX=4096 GN=LOC104224064 PE=3 SV=1	[more]
M5XJX2	9.5e-65	100.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G235000 PE=3 SV=1	[more]
M5VWV3	9.5e-65	100.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G077300 PE=3 SV=1	[more]
M5VYQ8	9.5e-65	100.00	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G254100 PE=3 SV=1	[more]
A0A4Y7L409	9.5e-65	100.00	Uncharacterized protein OS=Papaver somniferum OX=3469 GN=C5167_003478 PE=3 SV=1	[more]

BLAST of MS014265 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G12110.1	1.2e-67	97.56	actin-11	[more]
AT2G37620.1	4.5e-67	97.56	actin 1	[more]
AT2G37620.2	4.5e-67	97.56	actin 1	[more]
AT3G53750.1	4.5e-67	97.56	actin 3	[more]
AT5G09810.1	7.6e-67	96.75	actin 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004000	Actin family	SMART	SM00268	actin_3	coord: 1..123 e-value: 2.1E-4 score: -105.3
IPR004000	Actin family	PFAM	PF00022	Actin	coord: 1..123 e-value: 1.2E-52 score: 178.9
IPR004000	Actin family	PANTHER	PTHR11937	ACTIN	coord: 1..122
None	No IPR available	GENE3D	3.30.420.40		coord: 87..117 e-value: 1.1E-59 score: 203.9
None	No IPR available	GENE3D	3.30.420.40		coord: 20..86 e-value: 1.1E-59 score: 203.9
None	No IPR available	GENE3D	3.90.640.10	Actin; Chain A, domain 4	coord: 1..19 e-value: 1.1E-59 score: 203.9
None	No IPR available	PANTHER	PTHR11937:SF442	ACTIN-97	coord: 1..122
IPR004001	Actin, conserved site	PROSITE	PS00432	ACTINS_2	coord: 104..112
IPR043129	ATPase, nucleotide binding domain	SUPERFAMILY	53067	Actin-like ATPase domain	coord: 1..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014265.1	MS014265.1	mRNA