MS014261 (gene) Bitter gourd (TR) v1

Overview


Name	MS014261
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	CCHC-type domain-containing protein
Location	scaffold5: 1737938 .. 1738882 (+)
RNA-Seq Expression	MS014261
Synteny	MS014261

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACATAGTAGTGCTGCCCTACAAACGCATGGTATATGGCAGAGTGCAATTGGGTATGATCCATATGCACCCAACAAGGATGATAACAAGAATTCTGCACAACCAAACACGACTAGCTCTGAGCCAGAAGCAGAGAATGCATATGCAAGCTTTCAGGGTCTTCTTGCACTTGCTCGCATAACTGGTTCCAATGCCAATGAGGTTCGCGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGCTTTCAGTGCAGGAATTTCTTGAGTGTTAAGAATGATAAGGAGAAAGACCCAGAGGCTATCCAGGCTGATGTTATGTCTGAGCTGGATAAATTAAAAGGAAACATAGGTAAGGGGAAAGGTGCAGTTGAGAGTGATGAGGAAAGTGAGGAGGATGAGAGTGAAAGTTCTGACTCGGATGTCGATTCAGAGATTGAAAGGATTATTGCTGAAAGGGGAGGGAAAAAAACGAGTGGTAAGAAAAGATCATTGAAAAGAAAGGATGATTTGGTTGATGATGGATCAGGTTCAGATTCGAGAGAGAAGAAGAGGGGGAGGTCAAAAAGGAGGAGCCGAAGAAGAGAATCTGATGATTCAGATGACAACAGAAGGAAGAGGAGAAAGGAGAAGCACAGGAAAAGAGATGACTCATCGGATGAGGGTGAAAAACTTAAGCGACGTCATAGGAAGAGTAGAAAAGAGAAGAGAAGGAGAAGAAGCCATAGGTATTCTGATGACTCTGATTCTGATACATCTGAGGAATCTCATGGAAGGCACAAACACAAGAGTAGAAAGGCATCATTAACTGATTCTGAAGCTAGCAGCTCTGATGATACAAGGGGCAGGGCAAGGAAGCGCTCTGAGAAGAGGAGTAGGAAACACCGTCGAGAGGAGGAT

mRNA sequence

ATGCCAGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACATAGTAGTGCTGCCCTACAAACGCATGGTATATGGCAGAGTGCAATTGGGTATGATCCATATGCACCCAACAAGGATGATAACAAGAATTCTGCACAACCAAACACGACTAGCTCTGAGCCAGAAGCAGAGAATGCATATGCAAGCTTTCAGGGTCTTCTTGCACTTGCTCGCATAACTGGTTCCAATGCCAATGAGGTTCGCGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGCTTTCAGTGCAGGAATTTCTTGAGTGTTAAGAATGATAAGGAGAAAGACCCAGAGGCTATCCAGGCTGATGTTATGTCTGAGCTGGATAAATTAAAAGGAAACATAGGTAAGGGGAAAGGTGCAGTTGAGAGTGATGAGGAAAGTGAGGAGGATGAGAGTGAAAGTTCTGACTCGGATGTCGATTCAGAGATTGAAAGGATTATTGCTGAAAGGGGAGGGAAAAAAACGAGTGGTAAGAAAAGATCATTGAAAAGAAAGGATGATTTGGTTGATGATGGATCAGGTTCAGATTCGAGAGAGAAGAAGAGGGGGAGGTCAAAAAGGAGGAGCCGAAGAAGAGAATCTGATGATTCAGATGACAACAGAAGGAAGAGGAGAAAGGAGAAGCACAGGAAAAGAGATGACTCATCGGATGAGGGTGAAAAACTTAAGCGACGTCATAGGAAGAGTAGAAAAGAGAAGAGAAGGAGAAGAAGCCATAGGTATTCTGATGACTCTGATTCTGATACATCTGAGGAATCTCATGGAAGGCACAAACACAAGAGTAGAAAGGCATCATTAACTGATTCTGAAGCTAGCAGCTCTGATGATACAAGGGGCAGGGCAAGGAAGCGCTCTGAGAAGAGGAGTAGGAAACACCGTCGAGAGGAGGAT

Coding sequence (CDS)

ATGCCAGCCACAGCTGGAAGAGTTCGCATGCCTGCGAACAATAGGGTACATAGTAGTGCTGCCCTACAAACGCATGGTATATGGCAGAGTGCAATTGGGTATGATCCATATGCACCCAACAAGGATGATAACAAGAATTCTGCACAACCAAACACGACTAGCTCTGAGCCAGAAGCAGAGAATGCATATGCAAGCTTTCAGGGTCTTCTTGCACTTGCTCGCATAACTGGTTCCAATGCCAATGAGGTTCGCGGTGCTTGCAAGAGATGTGGACGTGTTGGACACCTTAGCTTTCAGTGCAGGAATTTCTTGAGTGTTAAGAATGATAAGGAGAAAGACCCAGAGGCTATCCAGGCTGATGTTATGTCTGAGCTGGATAAATTAAAAGGAAACATAGGTAAGGGGAAAGGTGCAGTTGAGAGTGATGAGGAAAGTGAGGAGGATGAGAGTGAAAGTTCTGACTCGGATGTCGATTCAGAGATTGAAAGGATTATTGCTGAAAGGGGAGGGAAAAAAACGAGTGGTAAGAAAAGATCATTGAAAAGAAAGGATGATTTGGTTGATGATGGATCAGGTTCAGATTCGAGAGAGAAGAAGAGGGGGAGGTCAAAAAGGAGGAGCCGAAGAAGAGAATCTGATGATTCAGATGACAACAGAAGGAAGAGGAGAAAGGAGAAGCACAGGAAAAGAGATGACTCATCGGATGAGGGTGAAAAACTTAAGCGACGTCATAGGAAGAGTAGAAAAGAGAAGAGAAGGAGAAGAAGCCATAGGTATTCTGATGACTCTGATTCTGATACATCTGAGGAATCTCATGGAAGGCACAAACACAAGAGTAGAAAGGCATCATTAACTGATTCTGAAGCTAGCAGCTCTGATGATACAAGGGGCAGGGCAAGGAAGCGCTCTGAGAAGAGGAGTAGGAAACACCGTCGAGAGGAGGAT

Protein sequence

MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQADVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRARKRSEKRSRKHRREED

Homology

[Close]

BLAST of MS014261 vs. NCBI nr
Match: XP_022148397.1 (CAX-interacting protein 4 isoform X1 [Momordica charantia] >XP_022148398.1 CAX-interacting protein 4 isoform X1 [Momordica charantia])

HSP 1 Score: 550.4 bits (1417), Expect = 9.8e-153
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSL 180
           VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSL
Sbjct: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKGSGKKRSL 180

Query: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240
           KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL
Sbjct: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240

Query: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300
           KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Sbjct: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300

Query: 301 KRSEKRSRKHRREED 316
           KRSEKRSRKHRRE D
Sbjct: 301 KRSEKRSRKHRREVD 315

[Close]

BLAST of MS014261 vs. NCBI nr
Match: XP_022148399.1 (CAX-interacting protein 4 isoform X2 [Momordica charantia])

HSP 1 Score: 549.3 bits (1414), Expect = 2.2e-152
Identity = 311/313 (99.36%), Postives = 311/313 (99.36%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSL 180
           VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSL
Sbjct: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKGSGKKRSL 180

Query: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240
           KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL
Sbjct: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240

Query: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300
           KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Sbjct: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300

Query: 301 KRSEKRSRKHRRE 314
           KRSEKRSRKHRRE
Sbjct: 301 KRSEKRSRKHRRE 313

[Close]

BLAST of MS014261 vs. NCBI nr
Match: KAG7010551.1 (CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 511.9 bits (1317), Expect = 3.9e-141
Identity = 300/318 (94.34%), Postives = 306/318 (96.23%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKR 180
           VMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKR
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKR 180

Query: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240
           SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300
            +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKSRK ASLTDSE SSSDDTRG
Sbjct: 241 TIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSRKTASLTDSEDSSSDDTRG 300

Query: 301 RARKRSEKRSRKHRREED 316
           RARKRSEKRSRKHR EED
Sbjct: 301 RARKRSEKRSRKHRYEED 317

[Close]

BLAST of MS014261 vs. NCBI nr
Match: XP_022943818.1 (CAX-interacting protein 4 [Cucurbita moschata])

HSP 1 Score: 506.9 bits (1304), Expect = 1.2e-139
Identity = 298/318 (93.71%), Postives = 305/318 (95.91%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKR 180
           VMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKR
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKR 180

Query: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240
           SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300
            +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+K ASLTDSE SSS DTRG
Sbjct: 241 TIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG 300

Query: 301 RARKRSEKRSRKHRREED 316
           RARKRSEKRSRKHR EED
Sbjct: 301 RARKRSEKRSRKHRYEED 317

[Close]

BLAST of MS014261 vs. NCBI nr
Match: XP_022986903.1 (CAX-interacting protein 4 [Cucurbita maxima])

HSP 1 Score: 504.2 bits (1297), Expect = 8.1e-139
Identity = 297/318 (93.40%), Postives = 303/318 (95.28%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKR 180
           VMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKR
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKR 180

Query: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240
           SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRES+DSDDNRRKRRKEKHRKRDDSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDNRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300
           K+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHK K RK ASLTDS+ SSSDD RG
Sbjct: 241 KIKRPHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKLKGRKAASLTDSDDSSSDDIRG 300

Query: 301 RARKRSEKRSRKHRREED 316
           RARKRSEKRSRKHR EED
Sbjct: 301 RARKRSEKRSRKHRYEED 317

[Close]

BLAST of MS014261 vs. ExPASy Swiss-Prot
Match: Q84Y18 (CAX-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=CXIP4 PE=1 SV=2)

HSP 1 Score: 270.4 bits (690), Expect = 2.6e-71
Identity = 201/340 (59.12%), Postives = 244/340 (71.76%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPE-A 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +     +P TT  + E  
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPTSKE-----EPKTTQQKTEDP 60

Query: 61  ENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQA 120
           EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQCRNFLS K DKEKDP AI+A
Sbjct: 61  ENSYASFQGLLALARITGSNNDEARGSCKKCGRVGHLTFQCRNFLSTKEDKEKDPGAIEA 120

Query: 121 DVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSG---- 180
            V+S L+K++  +GKG+  VE     EE+ESESSDSDVDSE+ERIIAER GKK  G    
Sbjct: 121 AVLSGLEKIRRGVGKGE--VEEVSSEEEEESESSDSDVDSEMERIIAERFGKKKGGSSVK 180

Query: 181 KKRSLKRKDDLVDDGSGSDS-----REKKRGRSKRRSRRR----ESDDSDDNRRKRRKEK 240
           K  S+++K   V D S SDS     + ++R   KR S +R    ES+D ++ R KRRKE+
Sbjct: 181 KTSSVRKKKKRVSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKER 240

Query: 241 H-RKRD-DSSDEGEKL--KRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSRK 300
             RKRD D SDE E    +R  RKSRKEKRRRRS R +SDDSDS++SE+   R K +++ 
Sbjct: 241 RGRKRDEDDSDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDR-RQKRRNKV 300

Query: 301 ASLTDSEASSSDDTRGR----ARKRSEKRSRK--HRREED 316
           A+ +DSEA+ S D   R    + KRSEK+SRK  HR+E +
Sbjct: 301 AASSDSEANVSGDDVSRVGRGSSKRSEKKSRKRHHRKERE 332

[Close]

BLAST of MS014261 vs. ExPASy TrEMBL
Match: A0A6J1D3Z8 (CAX-interacting protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017056 PE=4 SV=1)

HSP 1 Score: 550.4 bits (1417), Expect = 4.8e-153
Identity = 312/315 (99.05%), Postives = 312/315 (99.05%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSL 180
           VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSL
Sbjct: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKGSGKKRSL 180

Query: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240
           KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL
Sbjct: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240

Query: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300
           KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Sbjct: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300

Query: 301 KRSEKRSRKHRREED 316
           KRSEKRSRKHRRE D
Sbjct: 301 KRSEKRSRKHRREVD 315

[Close]

BLAST of MS014261 vs. ExPASy TrEMBL
Match: A0A6J1D3V6 (CAX-interacting protein 4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017056 PE=4 SV=1)

HSP 1 Score: 549.3 bits (1414), Expect = 1.1e-152
Identity = 311/313 (99.36%), Postives = 311/313 (99.36%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSL 180
           VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKK SGKKRSL
Sbjct: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKGSGKKRSL 180

Query: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240
           KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL
Sbjct: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240

Query: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300
           KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR
Sbjct: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRKASLTDSEASSSDDTRGRAR 300

Query: 301 KRSEKRSRKHRRE 314
           KRSEKRSRKHRRE
Sbjct: 301 KRSEKRSRKHRRE 313

[Close]

BLAST of MS014261 vs. ExPASy TrEMBL
Match: A0A6J1FXE5 (CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111448444 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 6.0e-140
Identity = 298/318 (93.71%), Postives = 305/318 (95.91%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKR 180
           VMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKR
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKR 180

Query: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240
           SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRES+DSDD+RRKRRKEKHRKRDDSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDSRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300
            +KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESH RHKHKS+K ASLTDSE SSS DTRG
Sbjct: 241 TIKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKHKSQKAASLTDSEDSSSVDTRG 300

Query: 301 RARKRSEKRSRKHRREED 316
           RARKRSEKRSRKHR EED
Sbjct: 301 RARKRSEKRSRKHRYEED 317

[Close]

BLAST of MS014261 vs. ExPASy TrEMBL
Match: A0A6J1JHW4 (CAX-interacting protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111484503 PE=4 SV=1)

HSP 1 Score: 504.2 bits (1297), Expect = 3.9e-139
Identity = 297/318 (93.40%), Postives = 303/318 (95.28%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNK+SAQ NT SSEPEAE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKSSAQQNTASSEPEAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGK--GKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKR 180
           VMSELDKLKGNIGK  GKGAVESDEESEE+ESESSDSD DSEIERIIAER GK+TS KKR
Sbjct: 121 VMSELDKLKGNIGKGNGKGAVESDEESEEEESESSDSDADSEIERIIAEREGKRTS-KKR 180

Query: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGE 240
           SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRES+DSDDNRRKRRKEKHRKRDDSSDEGE
Sbjct: 181 SLKRKDDLVDDGSGSDSREKKRGRSKRRSRRRESNDSDDNRRKRRKEKHRKRDDSSDEGE 240

Query: 241 KLKRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRG 300
           K+KR HRKSRKEKRRRRSHRYSDDSDSDTSEESH RHK K RK ASLTDS+ SSSDD RG
Sbjct: 241 KIKRPHRKSRKEKRRRRSHRYSDDSDSDTSEESHRRHKLKGRKAASLTDSDDSSSDDIRG 300

Query: 301 RARKRSEKRSRKHRREED 316
           RARKRSEKRSRKHR EED
Sbjct: 301 RARKRSEKRSRKHRYEED 317

[Close]

BLAST of MS014261 vs. ExPASy TrEMBL
Match: A0A0A0KHA7 (CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G190420 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.6e-132
Identity = 285/316 (90.19%), Postives = 297/316 (93.99%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPEAE 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKN+AQ NT SSEP+AE
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNAAQQNTASSEPDAE 60

Query: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120
           NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD
Sbjct: 61  NAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQAD 120

Query: 121 VMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSGKKRSL 180
           VMSELDKLKG    GKG VES+EESEE+ESESSDSD DSEIERIIAER GK+ S KKRSL
Sbjct: 121 VMSELDKLKG----GKGKVESEEESEEEESESSDSDADSEIERIIAEREGKRNS-KKRSL 180

Query: 181 KRKDDLVDDGSGSDSREKKRGRSKRRSRRRESDDSDDNRRKRRKEKHRKRDDSSDEGEKL 240
           KRKDD VDD SGSDSREKKRGRSKRRS RR+S+DSDD+RRKRRKEKHRKRDDSSDE EK 
Sbjct: 181 KRKDDSVDDASGSDSREKKRGRSKRRS-RRDSNDSDDSRRKRRKEKHRKRDDSSDEDEKH 240

Query: 241 KRRHRKSRKEKRRRRSHRYSDDSDSDTSEESHGRHKHKSRK-ASLTDSEASSSDDTRGRA 300
           +R HRKSRKEKRRRRSHRYSDDSDSDTSEE+HGRHKHKSRK ASLTDSEASSSDDTRGRA
Sbjct: 241 RRHHRKSRKEKRRRRSHRYSDDSDSDTSEETHGRHKHKSRKAASLTDSEASSSDDTRGRA 300

Query: 301 RKRSEKRSRKHRREED 316
           RKRSEKRSRKHR E++
Sbjct: 301 RKRSEKRSRKHRYEDE 310

[Close]

BLAST of MS014261 vs. TAIR 10
Match: AT2G28910.1 (CAX interacting protein 4 )

HSP 1 Score: 270.4 bits (690), Expect = 1.8e-72
Identity = 201/340 (59.12%), Postives = 244/340 (71.76%), Query Frame = 0


Query: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPNKDDNKNSAQPNTTSSEPE-A 60
           MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAP   +     +P TT  + E  
Sbjct: 1   MPATAGRVRMPANNRVHSSAALQTHGIWQSAIGYDPYAPTSKE-----EPKTTQQKTEDP 60

Query: 61  ENAYASFQGLLALARITGSNANEVRGACKRCGRVGHLSFQCRNFLSVKNDKEKDPEAIQA 120
           EN+YASFQGLLALARITGSN +E RG+CK+CGRVGHL+FQCRNFLS K DKEKDP AI+A
Sbjct: 61  ENSYASFQGLLALARITGSNNDEARGSCKKCGRVGHLTFQCRNFLSTKEDKEKDPGAIEA 120

Query: 121 DVMSELDKLKGNIGKGKGAVESDEESEEDESESSDSDVDSEIERIIAERGGKKTSG---- 180
            V+S L+K++  +GKG+  VE     EE+ESESSDSDVDSE+ERIIAER GKK  G    
Sbjct: 121 AVLSGLEKIRRGVGKGE--VEEVSSEEEEESESSDSDVDSEMERIIAERFGKKKGGSSVK 180

Query: 181 KKRSLKRKDDLVDDGSGSDS-----REKKRGRSKRRSRRR----ESDDSDDNRRKRRKEK 240
           K  S+++K   V D S SDS     + ++R   KR S +R    ES+D ++ R KRRKE+
Sbjct: 181 KTSSVRKKKKRVSDESDSDSDSGDRKRRRRSMKKRSSHKRRSLSESEDEEEGRSKRRKER 240

Query: 241 H-RKRD-DSSDEGEKL--KRRHRKSRKEKRRRRSHR-YSDDSDSDTSEESHGRHKHKSRK 300
             RKRD D SDE E    +R  RKSRKEKRRRRS R +SDDSDS++SE+   R K +++ 
Sbjct: 241 RGRKRDEDDSDESEDEDDRRVKRKSRKEKRRRRSRRNHSDDSDSESSEDDR-RQKRRNKV 300

Query: 301 ASLTDSEASSSDDTRGR----ARKRSEKRSRK--HRREED 316
           A+ +DSEA+ S D   R    + KRSEK+SRK  HR+E +
Sbjct: 301 AASSDSEANVSGDDVSRVGRGSSKRSEKKSRKRHHRKERE 332

The following BLAST results are available for this feature:

BLAST of MS014261 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148397.1	9.8e-153	99.05	CAX-interacting protein 4 isoform X1 [Momordica charantia] >XP_022148398.1 CAX-i...	[more]
XP_022148399.1	2.2e-152	99.36	CAX-interacting protein 4 isoform X2 [Momordica charantia]	[more]
KAG7010551.1	3.9e-141	94.34	CAX-interacting protein 4, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022943818.1	1.2e-139	93.71	CAX-interacting protein 4 [Cucurbita moschata]	[more]
XP_022986903.1	8.1e-139	93.40	CAX-interacting protein 4 [Cucurbita maxima]	[more]

BLAST of MS014261 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q84Y18	2.6e-71	59.12	CAX-interacting protein 4 OS=Arabidopsis thaliana OX=3702 GN=CXIP4 PE=1 SV=2	[more]

BLAST of MS014261 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D3Z8	4.8e-153	99.05	CAX-interacting protein 4 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1D3V6	1.1e-152	99.36	CAX-interacting protein 4 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1FXE5	6.0e-140	93.71	CAX-interacting protein 4 OS=Cucurbita moschata OX=3662 GN=LOC111448444 PE=4 SV=...	[more]
A0A6J1JHW4	3.9e-139	93.40	CAX-interacting protein 4 OS=Cucurbita maxima OX=3661 GN=LOC111484503 PE=4 SV=1	[more]
A0A0A0KHA7	1.6e-132	90.19	CCHC-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G190420 P...	[more]

BLAST of MS014261 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28910.1	1.8e-72	59.12	CAX interacting protein 4	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13917	zf-CCHC_3	coord: 83..107 e-value: 1.7E-6 score: 27.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 157..198
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..221
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 256..273
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..315
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 123..141
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	PANTHER	PTHR31437	SREK1IP1 FAMILY MEMBER	coord: 1..269
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 87..102 score: 8.960441

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014261.1	MS014261.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding