MS014236 (gene) Bitter gourd (TR) v1

Overview


Name	MS014236
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RAB GTPase homolog A2B
Location	scaffold5: 1574816 .. 1576640 (+)
RNA-Seq Expression	MS014236
Synteny	MS014236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GCCATGGCTCACAAGGTGGACCACGAGTACGACTATTTGTTCAAGATTGTCCTGATCGGGGATTCCGGCGTCGGCAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGCGTTGAGTTCTCTACCAGGACTCTCGAGGTAGAAGTTTAATCGTCTGAGCTCTTTGCGTTTATCATCGCTCGACGCTCACTATTTTTTTTTCCATTCATTTTGTGCATTTTTGTACCTATCATTTTCTAGATTTATCGTGTGAGTTGCTTTTTGTGATTGACGAACTTCAGAAGTCTAGGTTCTGATGATTTCTAGACGGAGCCTTACGCGATGGTTTTTTACTTTCAATCGTTAAAGTATAGTGGATTCGTTGCATGTGGAGTTTGAGTAAAGTTTCGAAGTAGTTACTTTCTTGCTTGAGGCTACAAAAGTTTAGGCTTGGATGAATAGGTGCTGGATTTATTGAATGTAAATAATATGTTGCTCATCTAACAAGCAACCATCTAGGTTCTTAGCCATTTCTATGGAATACTGAGAGATGATGATGCCATGTGTGCTCAATTATTCTAAAAGATGGTTGTGAAAGCAGTTAGAGCAGGAGAGAATTGATAGAATCCTTTTCCCGTATTTCTAGATCACCCTTATTTCTTACCAACTTATAAGCACCCTTTTATATTTGTTGTATTCCACTAATTTTGTAAATGCTCACGCTCTTAAAATTTTGAATGTTCTCCTTAACAAAGAGTAAAAATAACGAAATTGGGACTGTTCTCTTAAACTGTTTTAAATTAAGATGAAACCTAGTGAAATTCAAACCTAGTGAAATTCGGACTGTTCTGTTAAACCGTTTTAAATGTAGATGAAACCACAAGTTTCTTATATAAAAGTTAGGATATGTCCATCCTATTTTGGCCAAACCAATAGCCATTGGCTTAGGGATGACTATTTTTTCTTGTGAAAAGCTATCTAGTGAATGGAGCAAAGATTCAGAATTTTCTGAAGGGAGGTGCTGGGAAGGAAGATTGAGATTTCAAACCAAATTATCGGATATTTCTATGTATGGAATCATATACATTTTGCATCCCTTTCCACTGTTCTTATTTATCCTAAACCCAAAATTCTATTATAACAAATTATACATTCAAGGCCAATTGTTGGCCAATAGAGAAGGAGGTTTGTCCTCAGTTACCATATCACTATCTTGGGCAATTATTATCTAGTCTGGAACTCTTTTTTCCATTTCAGAGTTCTGTACACACTTGGTGGTTGAACTGTTTGTCATCTGATCTCATTTTGGTCAATATTATTGTCAATACAGGTAGAAGGAAAGACAGTAAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATAGGGGAGCTGTTGGTGCTCTTCTTGTTTATGATCTCACGAAGAGACCGACTTTCGACAACGTGCAAAGGTGGCTCCGGGAACTGAGAGATCATGCAGATTCCAACATTGTGATTGTGATGGTTGGAAACAAGTCTGACCTAAATCATCTTAGATCGGTCTCGGAGGATGATGGGCAGGCCATGGCTGAGAAGGAAGGCCTATCATTTATCGAGACGTCAGCCCTGGATGCTACTAATATCGAGAAGGCGTTCCAAACCATCTTGACAGAGATCTACCACATCATCAGCAAAAAGGCATTGGCTGCCCAGGAGGCAGCTGCGAGCGTGGGCCATCCCGGTCAGGGAACCACCATCAACGTTTCGGATGCTTCTGGGGACTCGAACAAAAGAGGTTGCTGTTCTACT

mRNA sequence

GCCATGGCTCACAAGGTGGACCACGAGTACGACTATTTGTTCAAGATTGTCCTGATCGGGGATTCCGGCGTCGGCAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGCGTTGAGTTCTCTACCAGGACTCTCGAGGTAGAAGGAAAGACAGTAAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATAGGGGAGCTGTTGGTGCTCTTCTTGTTTATGATCTCACGAAGAGACCGACTTTCGACAACGTGCAAAGGTGGCTCCGGGAACTGAGAGATCATGCAGATTCCAACATTGTGATTGTGATGGTTGGAAACAAGTCTGACCTAAATCATCTTAGATCGGTCTCGGAGGATGATGGGCAGGCCATGGCTGAGAAGGAAGGCCTATCATTTATCGAGACGTCAGCCCTGGATGCTACTAATATCGAGAAGGCGTTCCAAACCATCTTGACAGAGATCTACCACATCATCAGCAAAAAGGCATTGGCTGCCCAGGAGGCAGCTGCGAGCGTGGGCCATCCCGGTCAGGGAACCACCATCAACGTTTCGGATGCTTCTGGGGACTCGAACAAAAGAGGTTGCTGTTCTACT

Coding sequence (CDS)

GCCATGGCTCACAAGGTGGACCACGAGTACGACTATTTGTTCAAGATTGTCCTGATCGGGGATTCCGGCGTCGGCAAGTCCAACATTCTTTCTAGATTTACCAGAAATGAGTTCTGCTTGGAGTCCAAATCCACCATTGGCGTTGAGTTCTCTACCAGGACTCTCGAGGTAGAAGGAAAGACAGTAAAGGCACAGATCTGGGACACAGCAGGTCAGGAGCGATACCGTGCGATTACTAGTGCTTATTATAGGGGAGCTGTTGGTGCTCTTCTTGTTTATGATCTCACGAAGAGACCGACTTTCGACAACGTGCAAAGGTGGCTCCGGGAACTGAGAGATCATGCAGATTCCAACATTGTGATTGTGATGGTTGGAAACAAGTCTGACCTAAATCATCTTAGATCGGTCTCGGAGGATGATGGGCAGGCCATGGCTGAGAAGGAAGGCCTATCATTTATCGAGACGTCAGCCCTGGATGCTACTAATATCGAGAAGGCGTTCCAAACCATCTTGACAGAGATCTACCACATCATCAGCAAAAAGGCATTGGCTGCCCAGGAGGCAGCTGCGAGCGTGGGCCATCCCGGTCAGGGAACCACCATCAACGTTTCGGATGCTTCTGGGGACTCGAACAAAAGAGGTTGCTGTTCTACT

Protein sequence

AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVIVMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKKALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST

Homology

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BLAST of MS014236 vs. NCBI nr
Match: XP_022148474.1 (ras-related protein Rab11C [Momordica charantia])

HSP 1 Score: 426.8 bits (1096), Expect = 1.1e-115
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK
Sbjct: 121 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST
Sbjct: 181 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 217

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BLAST of MS014236 vs. NCBI nr
Match: KAG7035384.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 411.8 bits (1057), Expect = 3.8e-111
Identity = 207/218 (94.95%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGK 60
           AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGK
Sbjct: 30  AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGK 89

Query: 61  TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIV 120
           TVK+QIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFDNVQRWLRELRDHADSNIV
Sbjct: 90  TVKSQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIV 149

Query: 121 IVMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISK 180
           IVM+GNKSDLNHLR+VSEDDGQAMAEKEGLSFIETSALDATNI+KAFQTILTEIYHIISK
Sbjct: 150 IVMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISK 209

Query: 181 KALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           KALAAQEAAASV HPGQGTTINV++ SGDSN+RGCCS+
Sbjct: 210 KALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 247

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BLAST of MS014236 vs. NCBI nr
Match: KAG6605436.1 (Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 411.8 bits (1057), Expect = 3.8e-111
Identity = 207/218 (94.95%), Postives = 215/218 (98.62%), Query Frame = 0


Query: 1   AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGK 60
           AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGK
Sbjct: 39  AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGK 98

Query: 61  TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIV 120
           TVK+QIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFDNVQRWLRELRDHADSNIV
Sbjct: 99  TVKSQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIV 158

Query: 121 IVMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISK 180
           IVM+GNKSDLNHLR+VSEDDGQAMAEKEGLSFIETSALDATNI+KAFQTILTEIYHIISK
Sbjct: 159 IVMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISK 218

Query: 181 KALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           KALAAQEAAASV HPGQGTTINV++ SGDSN+RGCCS+
Sbjct: 219 KALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 256

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BLAST of MS014236 vs. NCBI nr
Match: XP_023532299.1 (ras-related protein Rab11C [Cucurbita pepo subsp. pepo])

HSP 1 Score: 411.0 bits (1055), Expect = 6.4e-111
Identity = 207/217 (95.39%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           VM+GNKSDLNHLR+VSEDDGQAMAEKEGLSFIETSALDATNI+KAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAAASV HPGQGTTINV++ SGDSN+RGCCS+
Sbjct: 181 ALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 217

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BLAST of MS014236 vs. NCBI nr
Match: XP_022946941.1 (ras-related protein Rab11C [Cucurbita moschata])

HSP 1 Score: 409.8 bits (1052), Expect = 1.4e-110
Identity = 206/217 (94.93%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           VM+GNKSDLNHLR+VSEDDGQAMAEKEGLSFIETSALDATNI+KAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQE+AASV HPGQGTTINV++ SGDSN+RGCCS+
Sbjct: 181 ALAAQESAASVPHPGQGTTINVTETSGDSNRRGCCSS 217

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BLAST of MS014236 vs. ExPASy Swiss-Prot
Match: Q40193 (Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 1.9e-105
Identity = 192/217 (88.48%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAH+VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +M GNKSDLNHLR+VSEDDG A++EKEGLSF+ETSAL+ATNIEKAFQTILTEIYHI+SKK
Sbjct: 121 MMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEA A    PGQGTTINV+D SG++ K+GCCST
Sbjct: 181 ALAAQEATAGASVPGQGTTINVADTSGNT-KKGCCST 216

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BLAST of MS014236 vs. ExPASy Swiss-Prot
Match: Q39434 (Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 5.7e-102
Identity = 189/217 (87.10%), Postives = 207/217 (95.39%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MA++VDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +M GNKSDL HLR+VSE+DGQA+AEKEGLSF+ETSAL+A NIEKAFQTILTEIYHIISKK
Sbjct: 121 MMAGNKSDLKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEA++++  PGQGTTINV+DAS  + +R CCST
Sbjct: 181 ALAAQEASSNL--PGQGTTINVADASA-NQRRSCCST 214

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BLAST of MS014236 vs. ExPASy Swiss-Prot
Match: Q9LNW1 (Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2)

HSP 1 Score: 367.9 bits (943), Expect = 8.2e-101
Identity = 184/217 (84.79%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +M GNKSDLNHLRSV+++DG+++AEKEGLSF+ETSAL+ATNIEKAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAA ++  PGQGT IN+SD+S  +N++GCCST
Sbjct: 181 ALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

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BLAST of MS014236 vs. ExPASy Swiss-Prot
Match: Q9FIF9 (Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1)

HSP 1 Score: 365.5 bits (937), Expect = 4.1e-100
Identity = 185/218 (84.86%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +M GNK+DLNHLRSV+E+DGQ +AE EGLSF+ETSAL+ATN+EKAFQT+L EIYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 182 ALAAQE-AAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQE AAA+   PGQGTTINV D SG + KRGCCST
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

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BLAST of MS014236 vs. ExPASy Swiss-Prot
Match: Q40523 (Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1)

HSP 1 Score: 365.2 bits (936), Expect = 5.3e-100
Identity = 184/217 (84.79%), Postives = 201/217 (92.63%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MA++VDHEYDYLFK+VLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRVDHEYDYLFKMVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALL YD+TKR TFDNVQRWLRELRDH DSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLFYDITKRQTFDNVQRWLRELRDHRDSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           ++ GNKSDL HLR+VSE D QA+ +KEGLSF+ETSAL+A N++KAFQTILT+IYHIISKK
Sbjct: 121 ILAGNKSDLKHLRAVSEQDDQALVKKEGLSFLETSALEALNVDKAFQTILTDIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAAAS   PGQGTTINVSD S +  KRGCCST
Sbjct: 181 ALAAQEAAASTALPGQGTTINVSDNSANV-KRGCCST 216

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BLAST of MS014236 vs. ExPASy TrEMBL
Match: A0A6J1D439 (ras-related protein Rab11C OS=Momordica charantia OX=3673 GN=LOC111017104 PE=4 SV=1)

HSP 1 Score: 426.8 bits (1096), Expect = 5.5e-116
Identity = 217/217 (100.00%), Postives = 217/217 (100.00%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK
Sbjct: 121 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST
Sbjct: 181 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 217

[Close]

BLAST of MS014236 vs. ExPASy TrEMBL
Match: A0A6J1G4Z7 (ras-related protein Rab11C OS=Cucurbita moschata OX=3662 GN=LOC111450970 PE=4 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 6.9e-111
Identity = 206/217 (94.93%), Postives = 214/217 (98.62%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           VM+GNKSDLNHLR+VSEDDGQAMAEKEGLSFIETSALDATNI+KAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQE+AASV HPGQGTTINV++ SGDSN+RGCCS+
Sbjct: 181 ALAAQESAASVPHPGQGTTINVTETSGDSNRRGCCSS 217

[Close]

BLAST of MS014236 vs. ExPASy TrEMBL
Match: A0A6J1L4I1 (ras-related protein Rab11C OS=Cucurbita maxima OX=3661 GN=LOC111499821 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 206/217 (94.93%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TFDNVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFDNVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           VM+GNKSDLNHLR+VSEDDGQAMAEKEGLSFIETSALDATNI+KAF TILTEIYHIISKK
Sbjct: 121 VMIGNKSDLNHLRAVSEDDGQAMAEKEGLSFIETSALDATNIDKAFHTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAAASV HPGQGTTINV++ SGDSN+RGCCS+
Sbjct: 181 ALAAQEAAASVPHPGQGTTINVTETSGDSNRRGCCSS 217

[Close]

BLAST of MS014236 vs. ExPASy TrEMBL
Match: A0A5D3CU43 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00310 PE=4 SV=1)

HSP 1 Score: 409.1 bits (1050), Expect = 1.2e-110
Identity = 205/218 (94.04%), Postives = 214/218 (98.17%), Query Frame = 0


Query: 1   AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGK 60
           AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGK
Sbjct: 56  AMAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGK 115

Query: 61  TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIV 120
           TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TF+NVQRWLRELRDHADSNIV
Sbjct: 116 TVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIV 175

Query: 121 IVMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISK 180
           IVM+GNKSDL+HLRSVSEDDGQ MAEKEGLSFIETSALDATNI+KAFQTILTEIYHIISK
Sbjct: 176 IVMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISK 235

Query: 181 KALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           KALAAQEAAAS+ HPGQGTTINVSD SGDSN+RGCCS+
Sbjct: 236 KALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 273

[Close]

BLAST of MS014236 vs. ExPASy TrEMBL
Match: A0A5A7V7L9 (Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold89G001070 PE=4 SV=1)

HSP 1 Score: 407.1 bits (1045), Expect = 4.5e-110
Identity = 204/217 (94.01%), Postives = 213/217 (98.16%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFST+TL+VEGKT
Sbjct: 1   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTKTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKR TF+NVQRWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRQTFENVQRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           VM+GNKSDL+HLRSVSEDDGQ MAEKEGLSFIETSALDATNI+KAFQTILTEIYHIISKK
Sbjct: 121 VMIGNKSDLSHLRSVSEDDGQTMAEKEGLSFIETSALDATNIDKAFQTILTEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAAAS+ HPGQGTTINVSD SGDSN+RGCCS+
Sbjct: 181 ALAAQEAAASITHPGQGTTINVSDTSGDSNRRGCCSS 217

[Close]

BLAST of MS014236 vs. TAIR 10
Match: AT1G07410.1 (RAB GTPase homolog A2B )

HSP 1 Score: 367.9 bits (943), Expect = 5.8e-102
Identity = 184/217 (84.79%), Postives = 208/217 (95.85%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MA+++DHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MANRIDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TF+NV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +M GNKSDLNHLRSV+++DG+++AEKEGLSF+ETSAL+ATNIEKAFQTIL+EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQEAA ++  PGQGT IN+SD+S  +N++GCCST
Sbjct: 181 ALAAQEAAGNL--PGQGTAINISDSSA-TNRKGCCST 214

[Close]

BLAST of MS014236 vs. TAIR 10
Match: AT5G59150.1 (RAB GTPase homolog A2D )

HSP 1 Score: 365.5 bits (937), Expect = 2.9e-101
Identity = 185/218 (84.86%), Postives = 203/218 (93.12%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MAH+V+ +YDYLFKIVLIGDSGVGK+NILSRFTRNEFCLESKSTIGVEF+TRTL+VEGKT
Sbjct: 1   MAHRVEQDYDYLFKIVLIGDSGVGKTNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFDNV RWLRELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +M GNK+DLNHLRSV+E+DGQ +AE EGLSF+ETSAL+ATN+EKAFQT+L EIYHIISKK
Sbjct: 121 MMAGNKADLNHLRSVAEEDGQTLAETEGLSFLETSALEATNVEKAFQTVLAEIYHIISKK 180

Query: 182 ALAAQE-AAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQE AAA+   PGQGTTINV D SG + KRGCCST
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVEDTSG-AGKRGCCST 217

[Close]

BLAST of MS014236 vs. TAIR 10
Match: AT3G46830.1 (RAB GTPase homolog A2C )

HSP 1 Score: 364.8 bits (935), Expect = 4.9e-101
Identity = 186/218 (85.32%), Postives = 202/218 (92.66%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           M H+VD EYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEF+TRT +VEGKT
Sbjct: 1   MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           +KAQIWDTAGQERYRAITSAYYRGAVGALLVYD+TKR TFDNV RWLRELRDHADSNIVI
Sbjct: 61  IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +M GNKSDLNHLRSV+E+DGQ++AEKEGLSF+ETSAL+ATN+EKAFQTIL EIYHIISKK
Sbjct: 121 MMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETSALEATNVEKAFQTILGEIYHIISKK 180

Query: 182 ALAAQE-AAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ALAAQE AAA+   PGQGTTINV D SG + KR CCS+
Sbjct: 181 ALAAQEAAAANSAIPGQGTTINVDDTSGGA-KRACCSS 217

[Close]

BLAST of MS014236 vs. TAIR 10
Match: AT1G09630.1 (RAB GTPase 11C )

HSP 1 Score: 316.2 bits (809), Expect = 2.0e-86
Identity = 156/217 (71.89%), Postives = 191/217 (88.02%), Query Frame = 0


Query: 2   MAHKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKT 61
           MA + D EYDYLFK+VLIGDSGVGKSN+LSRFTRNEFCLESKSTIGVEF+TRTL+VEG+T
Sbjct: 1   MARRPDEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRT 60

Query: 62  VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVI 121
           VKAQIWDTAGQERYRAITSAYYRGA+GALLVYD+TK  TF+NV RWL+ELRDHADSNIVI
Sbjct: 61  VKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVI 120

Query: 122 VMVGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKK 181
           +++GNK+DL HLR+V+ +D Q+ AEKEGLSFIETSAL+A N+EKAFQTIL+E+Y IISKK
Sbjct: 121 MLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKK 180

Query: 182 ALAAQEAAASVGHPGQGTTINVSDASGDSNKRGCCST 219
           ++++ +  A+  +  +G TI+V+  S  + K+ CCS+
Sbjct: 181 SISSDQTTAN-ANIKEGQTIDVAATSESNAKKPCCSS 216

[Close]

BLAST of MS014236 vs. TAIR 10
Match: AT4G18800.1 (RAB GTPase homolog A1D )

HSP 1 Score: 286.6 bits (732), Expect = 1.7e-77
Identity = 140/214 (65.42%), Postives = 173/214 (80.84%), Query Frame = 0


Query: 4   HKVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFSTRTLEVEGKTVK 63
           ++ D +YDYLFK+VLIGDSGVGKSN+LSRFTRNEF LESKSTIGVEF+TR+L V  K +K
Sbjct: 4   YRADDDYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIK 63

Query: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDLTKRPTFDNVQRWLRELRDHADSNIVIVM 123
           AQIWDTAGQERYRAITSAYYRGAVGALLVYD+T+  TF+NV+RWLRELRDH D NIV+++
Sbjct: 64  AQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVML 123

Query: 124 VGNKSDLNHLRSVSEDDGQAMAEKEGLSFIETSALDATNIEKAFQTILTEIYHIISKKAL 183
           VGNKSDL HL +V  +D ++ AE E L F+ETSAL++TN+E AF  +LT+IYH++SKKA+
Sbjct: 124 VGNKSDLRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAM 183

Query: 184 AAQEAAASVGHPGQGTTINVSDASGDSNKRGCCS 218
            A E + +V   G+   ++VS       K GCCS
Sbjct: 184 EAGEDSGNVPSKGEKIDVDVSAV----KKTGCCS 213

The following BLAST results are available for this feature:

BLAST of MS014236 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022148474.1	1.1e-115	100.00	ras-related protein Rab11C [Momordica charantia]	[more]
KAG7035384.1	3.8e-111	94.95	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605436.1	3.8e-111	94.95	Ras-related protein Rab11C, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_023532299.1	6.4e-111	95.39	ras-related protein Rab11C [Cucurbita pepo subsp. pepo]	[more]
XP_022946941.1	1.4e-110	94.93	ras-related protein Rab11C [Cucurbita moschata]	[more]

BLAST of MS014236 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q40193	1.9e-105	88.48	Ras-related protein Rab11C OS=Lotus japonicus OX=34305 GN=RAB11C PE=2 SV=1	[more]
Q39434	5.7e-102	87.10	Ras-related protein Rab2BV OS=Beta vulgaris OX=161934 GN=RAB2BV PE=2 SV=1	[more]
Q9LNW1	8.2e-101	84.79	Ras-related protein RABA2b OS=Arabidopsis thaliana OX=3702 GN=RABA2B PE=2 SV=2	[more]
Q9FIF9	4.1e-100	84.86	Ras-related protein RABA2d OS=Arabidopsis thaliana OX=3702 GN=RABA2D PE=2 SV=1	[more]
Q40523	5.3e-100	84.79	Ras-related protein Rab11A OS=Nicotiana tabacum OX=4097 GN=RAB11A PE=2 SV=1	[more]

BLAST of MS014236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D439	5.5e-116	100.00	ras-related protein Rab11C OS=Momordica charantia OX=3673 GN=LOC111017104 PE=4 S...	[more]
A0A6J1G4Z7	6.9e-111	94.93	ras-related protein Rab11C OS=Cucurbita moschata OX=3662 GN=LOC111450970 PE=4 SV...	[more]
A0A6J1L4I1	1.2e-110	94.93	ras-related protein Rab11C OS=Cucurbita maxima OX=3661 GN=LOC111499821 PE=4 SV=1	[more]
A0A5D3CU43	1.2e-110	94.04	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaff...	[more]
A0A5A7V7L9	4.5e-110	94.01	Ras-related protein Rab2BV OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]

BLAST of MS014236 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G07410.1	5.8e-102	84.79	RAB GTPase homolog A2B	[more]
AT5G59150.1	2.9e-101	84.86	RAB GTPase homolog A2D	[more]
AT3G46830.1	4.9e-101	85.32	RAB GTPase homolog A2C	[more]
AT1G09630.1	2.0e-86	71.89	RAB GTPase 11C	[more]
AT4G18800.1	1.7e-77	65.42	RAB GTPase homolog A1D	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 117..130 score: 50.19 coord: 152..174 score: 40.87 coord: 14..35 score: 52.05 coord: 55..77 score: 54.31 coord: 37..53 score: 36.12
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 2..186 e-value: 0.0048 score: -0.5
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 11..177 e-value: 1.0E-28 score: 111.4
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 14..177 e-value: 1.3E-112 score: 390.1
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 19..211 e-value: 1.6E-7 score: 41.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 193..218
None	No IPR available	PANTHER	PTHR47978:SF33	RAS-RELATED PROTEIN RABA2D	coord: 2..218
None	No IPR available	PANTHER	PTHR47978	FAMILY NOT NAMED	coord: 2..218
None	No IPR available	PROSITE	PS51420	RHO	coord: 7..189 score: 9.988775
None	No IPR available	PROSITE	PS51419	RAB	coord: 9..216 score: 36.14645
None	No IPR available	CDD	cd01868	Rab11_like	coord: 11..175 e-value: 3.38372E-128 score: 356.485
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 16..173 e-value: 8.0E-12 score: 31.8
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 15..175 e-value: 2.0E-61 score: 206.3
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 9..218 score: 16.948708
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 6..216 e-value: 1.4E-74 score: 251.8
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 9..179
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 12..171 e-value: 5.1E-41 score: 138.1
IPR025662	Sigma-54 interaction domain, ATP-binding site 1	PROSITE	PS00675	SIGMA54_INTERACT_1	coord: 16..29

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014236.1	MS014236.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding