MS014192 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ACAGAGGTGGAGATTGGGAAAGATGGGAAGCTTGGTGTCATGGCGAGGAAGTCAGCGAGTGGTTGGAAATTTTATTGGGTCGGTCTTACGGCAGAGCTCACTCTGGCCTTTCGTTGACTCTCTGGCCTTCGAATTTGACCAACGCCGAGACTTATTCTCGTAATCGTCGAGGAAGCCGATGCTCCGGCGATCGAGTTTTAATCATTCTGATTTCTGTTTGGTAAATGCGAGTGGACGG ACAGAGGTGGAGATTGGGAAAGATGGGAAGCTTGGTGTCATGGCGAGGAAGTCAGCGAGTGGTGAAATTTTATTGGGTCGGTCTTACGGCAGAGCTCACTCTGGCCTTTCGTTGACTCTCTGGCCTTCGAATTTGACCAACGCCGAGACTTATTCTCGTTCGTCGAGGAAGCCGATGCTCCGGCGATCGAGTTTTAATCATTCTGATTTCTGTTTGGTAAATGCGAGTGGACGG ACAGAGGTGGAGATTGGGAAAGATGGGAAGCTTGGTGTCATGGCGAGGAAGTCAGCGAGTGGTGAAATTTTATTGGGTCGGTCTTACGGCAGAGCTCACTCTGGCCTTTCGTTGACTCTCTGGCCTTCGAATTTGACCAACGCCGAGACTTATTCTCGTTCGTCGAGGAAGCCGATGCTCCGGCGATCGAGTTTTAATCATTCTGATTTCTGTTTGGTAAATGCGAGTGGACGG TEVEIGKDGKLGVMARKSASGEILLGRSYGRAHSGLSLTLWPSNLTNAETYSRSSRKPMLRRSSFNHSDFCLVNASGR Homology
BLAST of MS014192 vs. NCBI nr
Match: XP_021971563.1 (probable auxin efflux carrier component 1b [Helianthus annuus] >KAF5821185.1 putative membrane transport protein [Helianthus annuus]) HSP 1 Score: 77.8 bits (190), Expect = 4.6e-11 Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of MS014192 vs. NCBI nr
Match: XP_022966088.1 (probable auxin efflux carrier component 1b [Cucurbita maxima]) HSP 1 Score: 77.4 bits (189), Expect = 6.0e-11 Identity = 51/82 (62.20%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of MS014192 vs. NCBI nr
Match: XP_004144328.1 (probable auxin efflux carrier component 1b [Cucumis sativus] >KGN54700.1 hypothetical protein Csa_012183 [Cucumis sativus]) HSP 1 Score: 77.4 bits (189), Expect = 6.0e-11 Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of MS014192 vs. NCBI nr
Match: XP_038880939.1 (probable auxin efflux carrier component 1b isoform X1 [Benincasa hispida]) HSP 1 Score: 77.4 bits (189), Expect = 6.0e-11 Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of MS014192 vs. NCBI nr
Match: XP_008455726.1 (PREDICTED: probable auxin efflux carrier component 1b [Cucumis melo]) HSP 1 Score: 77.4 bits (189), Expect = 6.0e-11 Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of MS014192 vs. ExPASy Swiss-Prot
Match: Q9C6B8 (Auxin efflux carrier component 1 OS=Arabidopsis thaliana OX=3702 GN=PIN1 PE=1 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 4.1e-10 Identity = 42/78 (53.85%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of MS014192 vs. ExPASy Swiss-Prot
Match: Q9LU77 (Auxin efflux carrier component 2 OS=Arabidopsis thaliana OX=3702 GN=PIN2 PE=1 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 9.4e-07 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of MS014192 vs. ExPASy Swiss-Prot
Match: Q67UL3 (Probable auxin efflux carrier component 1c OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1C PE=2 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 1.2e-06 Identity = 36/72 (50.00%), Postives = 43/72 (59.72%), Query Frame = 0
BLAST of MS014192 vs. ExPASy Swiss-Prot
Match: Q5SMQ9 (Auxin efflux carrier component 1a OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1A PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 1.6e-06 Identity = 36/73 (49.32%), Postives = 46/73 (63.01%), Query Frame = 0
BLAST of MS014192 vs. ExPASy Swiss-Prot
Match: Q0IQA5 (Probable auxin efflux carrier component 1d OS=Oryza sativa subsp. japonica OX=39947 GN=PIN1D PE=2 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 3.6e-06 Identity = 32/78 (41.03%), Postives = 43/78 (55.13%), Query Frame = 0
BLAST of MS014192 vs. ExPASy TrEMBL
Match: A0A251VM50 (Auxin efflux carrier component OS=Helianthus annuus OX=4232 GN=PIN1B PE=3 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 2.2e-11 Identity = 47/73 (64.38%), Postives = 53/73 (72.60%), Query Frame = 0
BLAST of MS014192 vs. ExPASy TrEMBL
Match: A0A5A7SKX8 (Auxin efflux carrier component OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold749G00260 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11 Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of MS014192 vs. ExPASy TrEMBL
Match: A0A6J1HQV8 (Auxin efflux carrier component OS=Cucurbita maxima OX=3661 GN=LOC111465879 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11 Identity = 51/82 (62.20%), Postives = 56/82 (68.29%), Query Frame = 0
BLAST of MS014192 vs. ExPASy TrEMBL
Match: D7URM4 (Auxin efflux carrier component OS=Cucumis sativus OX=3659 GN=CsPIN4 PE=2 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11 Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of MS014192 vs. ExPASy TrEMBL
Match: A0A0A0KYF4 (Auxin efflux carrier component OS=Cucumis sativus OX=3659 GN=Csa_4G430820 PE=3 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.9e-11 Identity = 50/81 (61.73%), Postives = 56/81 (69.14%), Query Frame = 0
BLAST of MS014192 vs. TAIR 10
Match: AT1G73590.1 (Auxin efflux carrier family protein ) HSP 1 Score: 65.1 bits (157), Expect = 2.9e-11 Identity = 42/78 (53.85%), Postives = 48/78 (61.54%), Query Frame = 0
BLAST of MS014192 vs. TAIR 10
Match: AT5G57090.1 (Auxin efflux carrier family protein ) HSP 1 Score: 53.9 bits (128), Expect = 6.7e-08 Identity = 36/82 (43.90%), Postives = 51/82 (62.20%), Query Frame = 0
BLAST of MS014192 vs. TAIR 10
Match: AT1G70940.1 (Auxin efflux carrier family protein ) HSP 1 Score: 48.9 bits (115), Expect = 2.1e-06 Identity = 33/70 (47.14%), Postives = 40/70 (57.14%), Query Frame = 0
BLAST of MS014192 vs. TAIR 10
Match: AT2G01420.1 (Auxin efflux carrier family protein ) HSP 1 Score: 47.4 bits (111), Expect = 6.2e-06 Identity = 33/70 (47.14%), Postives = 37/70 (52.86%), Query Frame = 0
BLAST of MS014192 vs. TAIR 10
Match: AT2G01420.2 (Auxin efflux carrier family protein ) HSP 1 Score: 47.4 bits (111), Expect = 6.2e-06 Identity = 33/70 (47.14%), Postives = 37/70 (52.86%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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