MS014135 (gene) Bitter gourd (TR) v1

Overview
NameMS014135
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionSec14p-like phosphatidylinositol transfer family protein
Locationscaffold5: 851654 .. 851833 (-)
RNA-Seq ExpressionMS014135
SyntenyMS014135
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATACGTACTGTCGGGGCCACCGAGCTGGGTGACGGCGTCGACGAAGCGCTCGTGGAGCTCGACGGTCCAGCGGAGACGGGGCTTGGGGTCGGTGGTGAGGACGAGGCCGGAGTCGGCTTGGACGCACATTGGCCTGTCATTGATAGAGGAGGGTTTCTTGGGGGCATGGAACATTCTGAA

mRNA sequence

ATACGTACTGTCGGGGCCACCGAGCTGGGTGACGGCGTCGACGAAGCGCTCGTGGAGCTCGACGGTCCAGCGGAGACGGGGCTTGGGGTCGGTGGTGAGGACGAGGCCGGAGTCGGCTTGGACGCACATTGGCCTGTCATTGATAGAGGAGGGTTTCTTGGGGGCATGGAACATTCTGAA

Coding sequence (CDS)

ATACGTACTGTCGGGGCCACCGAGCTGGGTGACGGCGTCGACGAAGCGCTCGTGGAGCTCGACGGTCCAGCGGAGACGGGGCTTGGGGTCGGTGGTGAGGACGAGGCCGGAGTCGGCTTGGACGCACATTGGCCTGTCATTGATAGAGGAGGGTTTCTTGGGGGCATGGAACATTCTGAA

Protein sequence

IRTVGATELGDGVDEALVELDGPAETGLGVGGEDEAGVGLDAHWPVIDRGGFLGGMEHSE
Homology
[Close]
BLAST of MS014135 vs. NCBI nr
Match: GER47657.1 (Sec14p-like phosphatidylinositol transfer family protein [Striga asiatica])

HSP 1 Score: 54.3 bits (129), Expect = 4.2e-04
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 1  IRTVGATELGDGVDEALVELDGPAETGLGVGGEDEA 37
          I TVGATELGDG+ +ALVEL+ P+E G GVGGED+A
Sbjct: 11 IHTVGATELGDGIYKALVELNSPSEAGFGVGGEDKA 46

[Close]
BLAST of MS014135 vs. ExPASy TrEMBL
Match: A0A5A7QTA6 (Sec14p-like phosphatidylinositol transfer family protein OS=Striga asiatica OX=4170 GN=STAS_24775 PE=4 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 2.0e-04
Identity = 26/36 (72.22%), Postives = 31/36 (86.11%), Query Frame = 0 

Query: 1  IRTVGATELGDGVDEALVELDGPAETGLGVGGEDEA 37
          I TVGATELGDG+ +ALVEL+ P+E G GVGGED+A
Sbjct: 11 IHTVGATELGDGIYKALVELNSPSEAGFGVGGEDKA 46

The following BLAST results are available for this feature:
BLAST of MS014135 vs. NCBI nr
Match NameE-valueIdentityDescription
GER47657.14.2e-0472.22Sec14p-like phosphatidylinositol transfer family protein [Striga asiatica][more]
BLAST of MS014135 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of MS014135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7QTA62.0e-0472.22Sec14p-like phosphatidylinositol transfer family protein OS=Striga asiatica OX=4... [more]
BLAST of MS014135 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS014135.1MS014135.1mRNA