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MS014101 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GTGCTGCTTCAATCACTTGCCGCCAACACTGCTTGTGTTCCCCTGGACCTTGTCATTCTCGATGCAGCTATGGCTTCCTTCAACGGCGTTCTAGCTTTCTTAGCCTTTTCGCAGGTGAGCTTAAACCGTTTTTGAATCTTTGCTGTTTGGTTAATTATGATTGCTTCTGGTCTGGACGTTGCAGAAATTGCTCCGTCCCCTCCTCTTCGTTGTTTTCTTTTTGTGATGTATTTGCAGTTATATTCGTTTTTTCGTTCACGAATGATTAGAAATTACCTTCACCGAATTCTCATGGCTTTTTACAACCACTGATTAATTGAAGTCCAAATGCTTACAGAGAAGCTCTAATCAGGCCTAACATTTGGTTTAAGTGATGGTACCGGTGCTTAGGAACGCATTGAAGCACTATTTGACGGGGGACGAGAGGTATTCCTTAAGTGTTCATTTCGGTCGGGAATCCTTTTGCCTCTCTCTCCCGAGAACGAAGGAGAATGTTCGTTTGTTCTTGATATCCAAACGCTAGTTCGATTGTCGAGGGACATTGCCGAACGGAAAGAGGACTTTGTTTTCTCTTTTTTCTTTCACATAGGAGTTTGAGAAGACTGAGACTGTTAAATATTGAAATTCTCTCCAATTTGAAAGGCATTAGGGATAGCAAGCAATCGAGCATGAATTTCATAACTGCATCATAATTTTTCCAACTTAATTATTTTTTAATGACTTGTATAAATTTAGTAAATGTTTCTTCATTCTAAAGAACTTACGGGGAATGAATGATGGAATGCGCTCATGCATTCCCTACCTTGTTTATTACTCTCTAGGTCATGGCTACTGCTGTCTGCTGTGTGTTCATTTAGTGAATGGTTTATCATTAGTACTTTTATCATGCATTAATTATTCTGATTATTATTCCAGCTCATCAGAATTCACATGCGGGGTCAACAGGATGGATGGACGCGTCAAAAAGTAAGTCGTAGTTTTTGTACCCTTTAATTCTCATTTACTGTTAAGTAAGAACTAAGAAGGATTTAAAGTTAAAATATATAACTTTGGAACCGCAAGTAAGATTTGTTCTTAGTCGTTCAAATAAACCAATATGTTTTGAAGTACAGAACTCTATAGCTCCTTGAAGTCTAGGCACAAATAAATGAAGAAGGGTTTCTAACAAGGATTCAATCGCAAGTCTTGATATATATTCTAAGAGAGGCGTGAAATAGTTATAACATATATTCTTAGAATAGTTATCTACTTTTATTTTTTTTTCCTTTGTTGATTGGAAAAAAAGATGCCCATCTTCAATGTAAAAGAGATTTTAAATATAACTCGAGCATGAAAGGTTGATTTTCTGGATCAAGTTATCTTTGACACGTACTCTGGGAGGCTAAACCTCGAGCCTCACGATGGAATCTTAACGAAAATGAATATTTGAAAGTGGACTCAATTGCCTCAGAAGTCAGTTACCATGGGACTGCTAGGTTGTATTCATGATAGTTTGGTTATTATGATACTAGTCATTAATTTTTTCTAGTTGTAATGTGACGTTTGGGGAAATTGGAGTTACTTTTCTTTGTAAACCATTTTGATGCATTATATGTTTATAACTGAATCTATTGCATTAGTATTATTTTGTTTATTTTTATATATATGGTGCAGTATGTTCGTGTATGAAGTAAACAATCTCGTTTTCTTTTTATAAGCTTATGATTTGCACTTTAAACTTTATCTTAGCTTTTGGGACAATGATATTCATTCCCATTATTACTTGTCTTTGTCTAATGTGTAATGGTGCATGTGAAAGCCATGTAGTCTTTCTGCAATATGGTTATTACTTTCTCCTTTTAATATATCTGATAAAAGATCACATTTCTCTTTGAAATGAGTTGTCATTTGCCAACTCTGTTCTATTTTATTGTTAAAATTCTCACTATGCGATTGTAATATTTTTCTGGAATTCAACTTGCAGGCAGTTCATCTGATGATAGGCTCTTCTAACTTGGGTAAGGACATACCAGTTAAGATGACCAATTATCCTATATATTTGCTACCCATACCCATATATTCCTGTTACTAGGATCAAATCTATGTTTGATATTGCATTTGGATCAACCCGGTCCATATTATAAATAGAATTTAAGGCATCATATTGAAAATGTTATAAAGAATTTTGGCGTACTAAGTCTATCATGGTTGTTCCTGCCATTTGCGAGACTGAGGGATCAAGTTGTGGTAGGCTTGTTTTTTGGCCATTTTGTGGGGTGTTTGGATTGGGAGGAATAGCAAAATTTTATGGGAATTGAGAAGACTTTGGGGAAATTTGGGAGTTGGTTAGATTTAATACCTCTCTTTGGGTGTGGGCGTCTAAGAATTTTTGTAATTACCGGTTAGTATTATTTGAATTAGGATCTATTCTTATAGGCGGCTCCCCTTTTGTCAAGCTTGTTTTTTGTAGGCCCCTTGTATATTCTTTCATTTATTCTCAGTGAAAGCATGGTTTCTTATTAAAAAAAAAAAAAACATTGCATAATTACTCGTAGTCGAACTTTTATTGTACACTTGTATGAATGTCGATCTGCCAGTTACACATTGGTAACAAGTCCTTAACTTTGTACCATGTTGTTCTTTGTTTATTTTGTTTCCTGTTCTGGATGCTCTTATCAGGGCCCGATTTAGGCTGCTGAACATAACACCATGTTAATTTGTGGACCTTGATCATTTATTTGCAGGCTATATGATTTATTTCATATTTGCACTTGTTGCTACTTTTGAACTCTGGAATTGCGGGTCTCATGTTTTTGGATTTGTCCTCATGGGTATGCTTTCAACAGTTGTTATAATTTTGTGTCCGTAGATGTAGGATATACTAATGATTTTGAACGGAATTGTTCTTGGCTCTTGCAGCTTTCCCTAAAATACTGTTTCTAGCAGCTTTTCTCCTACTTCTTTCTTTCTGGTAAGTTTCCATCATTTTCCAATGTAAAAGCCTCTATTCTTGAATTTGGTAATCTACCTATCCTTTTATGATTTTGTTTTTTTGATCAGTCCTTTTATTGTTTCAAAAGTTTCAAGCATTAGATTGTGATAGAATCTGTCTATTATTTATGTATGAGAGGGAAATAACAGAGCCGAGGGAGTATTCGAGTGCTCCCGTTTCTCTCCTACAGACGCCTATAGACTCAGCAACATCAAGAATGATCCCCCCTTCTCCTAAGGACAGACCTATAAACATAACCAACAATACCCCAAAATACCCTCTAACTGATTCTAGTCCTCCGTGCATAATACCGTAACAAACCTGAGCCCACGTAGTCTAACTTCCTCTATTCTTTCTTCTTTCCCTTCCTCCTAGCATACGTCTTCGTAATAGGAGGTCTATCAGATTGCTTATTCAAAGATTATTTAAAAATCATTCTGTCGTAATAAGTGGACATTTTGAATACTCTAGTCTTTCGAGTCAGTTTTAACTGATCTAATTGGTCAGGCACAAACATATTTGCATCTTTCTTAGCTTCAGGGTCTAGTGATATGTTCATTTCTTGTATGTGTTCAAACCCGATTATGCCCCTTAGAGAAGTATAAATTTTTAAGCTCCTTTCTAGTTGTGCTCGTAGATTTGAAAATATGATGCTACTGGCTAAAGTTGGATATTAATGCTGTTATGGTAGCGTGCATTTTTTTAATTAAAATTTTATTTCATTCAAATGACAGTGCAGTGTAATTTATATGGTATATGTATGCTTCTATTGTATATGATATCATAGGGTCGACCTTTGCCATCAGGCAAACGATGAAGAGGATGACGACGACGATGAAGAAAATAACACTCAACAGGCCTTGTTGGAAAATTCAAAGAACAAACCTGGTTCATCAAATGTAGATGGCCATCGAAGATGTTGCGGATTTCCTGCTACTCATCTTGGAAGTAGGCAAAAAATTGTAATTGTGGTAAATGTGGAACACTTAATTATTATCATTTATTTGTGTGAAGTGTAATGAGGTCGTATACAATTTGCTCATCTGATATTTATTTTTTTCTGTAATTACTTAGGAATATTAATTTGAATCTTATATCAGCCATCCCTCACCTTCAGGTTGTCATACTGGTATTTATCCTCATGGTGGCAGTTTCTGTTCTGATCTGGATTGGGGCAGGACAAAATCCTATTGATTCTACAGCTGTTGCCAGGGTACGAATGACTTTTCACTCATGAATCTGGTTGTGATGTACAAATTGTCTAAAATTCAGTTGTTTCGGATACAGAACTCCTAATCAGAGTATCCAGAAAGAACGACATGGCAGTTAAATTGACTAAAAAATCTTTACAATACGAGTAAATAATAGAGTCAAAGCATTCTCTAATTGATTAGGAAACCTTAAATAGAGTTCATTTCCAACCATCATGGGATGACCTAGTGGTCAATAAGGGCTAATGTAAATAGCAAAGAGCTTAGAGGGAATGGGTTCAAACTATGTGGCCACCTACCTAGGATAATATTCTACGAATTACCTTGTCAACCAAATGTAGTAGGGTCAGGCGGTTGACCTGTGATTAGTCGAGGTGCGTGCAAGCTGATCCGGACACACGGATTTAAAAAAAAGGGTTCATTTCCTATTGGATAGAGAGTTCATTATTATCCTTTGTTAATAACACCCAATTCGACATTCTTATAGTAATTGGCTGTATTAATCATTAATATAATGAACTAAAAAATATAATGAACTAAAAAAAGGAAAGAACTAGTATAAAATTGTTATGACTACAAGTATATTACTTTTCTTTTCCTTGGGTAAAGTTAGTATTAGTACTTAATGTAATATTCTTAATCAAAGCACAGGTTAGAGCCATATTTCTTGTGCTGTGTGAAAATTGAAAATATGTTTTCATTTTGTAGCTATTTGTTAGTTCTATGCTGAACTTTTAGTTCCATACTTCTTTCCTGCAGGTATCTGATCCTGTAGTTATATGTATTTATATAATTCTATTGAGTCCTAATTGCTGTTTATGCCAACATCTCTTCTGTTCAGGTGTATGAAGACTTTCTTGCTGTTACAGTCCTCCTATCAGGAGGTGCCCTAGGTTTCTATGGTGAGCAAATTTGCCAGATAGTTTTTGGTTTTCTTCTTGTCAGTTTGCAATTTTTTGATAAGATATTCTTGGCAGTTTGCATTTGATGTTTAACTTTTTTTTTTTTTTAATATCCTTTATATCCAATTCTGATTTCTCTTTCTTCTCTCTCGAAATATTTTCAGGTTTCATGTTATTTTATAGATTGAAAAAAGTACGTTCTGAGGAAGCCTCTTCCGAGATGAAGAAGGTATTGGATTGATAAGTTATATAACTGCCATCTATTCTTCCCTGTCTCCTGTATGTTGAAGTGCTATTTCCTGAATGCACATGGCTGTGGATGGGAAACCCACGAAGAATTAAATTGCTTAAAAATTCAAAGTCGAAATGATGATCCACAAACTATACGAATACGATGTAGCATCTTTTTCTGAAATCTGAGAAATCTCAAGATTCTGGGCATTATTCTATTACATGCAGGTTGGTGGGCTAGCAGTTGTCTGTGTTGTGTGTTTTACATCAAGTGCTCTGGTAGATCTTCTTACAGATATTCCTGTAAGTTGTCAACTGTCTCTTTATGTGTATGAACCTCATTGGTTGTCAATGAGTTCATATTTGTATGTTCCTTCTAAGTTTCTAACTTCTCTATCACTTATGATAGCTTTCCTATAATTGGCGCTTCACGAGAACAAACGGAGTAAATGCCCTAGTCCTTTTGATTTTGTACTTCTGCATGGGTAAGTCCTTTTGATTTCTTTTATAGTTTTTATGAATCTGGGTTCTAAACTGTTTATGAGTATCATATAATAGTCTAGTTAGTCCTGAGTTACTTTAAACGATGGATTTTGATATCTCAGAGAAAAGTATTCGTGCAAGTTTACTTTTGAAGTATATCTGGTGTTTTTTAATTCTTTTTGGTACGATTAGTTAAGTGTTTTTGTAGACTTATTTGGGATTGGATATCCTTTTTGAATATATATCCCTGATAATAGATTGCAGTGCTACTTTTCATTAATTAGTGAGCTTTTCTGTGTACCTTTGTTTATTTTTCTCCAAATTTGTTTGCTTGATAGGTTCTTTGATTCCATCAGCCTTTTTATTGTGGATTATGAGAGAGCTGCCACCTCCAAAAAAAATTCAGAGACAAGAAGAATCGAGGGCAATAGCTTTTATAAGCCATGGGGCAGCTGATGCAAATCCTCAGCGTTGGGCTGATGTAACTCGTTCAAAGAATCAGGTTTCTTGCCTATCCTCTTCTGAAGTATCAACATTATCTTTT GTGCTGCTTCAATCACTTGCCGCCAACACTGCTTGTGTTCCCCTGGACCTTGTCATTCTCGATGCAGCTATGGCTTCCTTCAACGGCGTTCTAGCTTTCTTAGCCTTTTCGCAGGCAGTTCATCTGATGATAGGCTCTTCTAACTTGGGCTATATGATTTATTTCATATTTGCACTTGTTGCTACTTTTGAACTCTGGAATTGCGGGTCTCATGTTTTTGGATTTGTCCTCATGGCTTTCCCTAAAATACTGTTTCTAGCAGCTTTTCTCCTACTTCTTTCTTTCTGGGTCGACCTTTGCCATCAGGCAAACGATGAAGAGGATGACGACGACGATGAAGAAAATAACACTCAACAGGCCTTGTTGGAAAATTCAAAGAACAAACCTGGTTCATCAAATGTAGATGGCCATCGAAGATGTTGCGGATTTCCTGCTACTCATCTTGGAAGTAGGCAAAAAATTGTAATTGTGGTTGTCATACTGGTATTTATCCTCATGGTGGCAGTTTCTGTTCTGATCTGGATTGGGGCAGGACAAAATCCTATTGATTCTACAGCTGTTGCCAGGGTGTATGAAGACTTTCTTGCTGTTACAGTCCTCCTATCAGGAGGTGCCCTAGGTTTCTATGGTTCTTTGATTCCATCAGCCTTTTTATTGTGGATTATGAGAGAGCTGCCACCTCCAAAAAAAATTCAGAGACAAGAAGAATCGAGGGCAATAGCTTTTATAAGCCATGGGGCAGCTGATGCAAATCCTCAGCGTTGGGCTGATGTAACTCGTTCAAAGAATCAGGTTTCTTGCCTATCCTCTTCTGAAGTATCAACATTATCTTTT GTGCTGCTTCAATCACTTGCCGCCAACACTGCTTGTGTTCCCCTGGACCTTGTCATTCTCGATGCAGCTATGGCTTCCTTCAACGGCGTTCTAGCTTTCTTAGCCTTTTCGCAGGCAGTTCATCTGATGATAGGCTCTTCTAACTTGGGCTATATGATTTATTTCATATTTGCACTTGTTGCTACTTTTGAACTCTGGAATTGCGGGTCTCATGTTTTTGGATTTGTCCTCATGGCTTTCCCTAAAATACTGTTTCTAGCAGCTTTTCTCCTACTTCTTTCTTTCTGGGTCGACCTTTGCCATCAGGCAAACGATGAAGAGGATGACGACGACGATGAAGAAAATAACACTCAACAGGCCTTGTTGGAAAATTCAAAGAACAAACCTGGTTCATCAAATGTAGATGGCCATCGAAGATGTTGCGGATTTCCTGCTACTCATCTTGGAAGTAGGCAAAAAATTGTAATTGTGGTTGTCATACTGGTATTTATCCTCATGGTGGCAGTTTCTGTTCTGATCTGGATTGGGGCAGGACAAAATCCTATTGATTCTACAGCTGTTGCCAGGGTGTATGAAGACTTTCTTGCTGTTACAGTCCTCCTATCAGGAGGTGCCCTAGGTTTCTATGGTTCTTTGATTCCATCAGCCTTTTTATTGTGGATTATGAGAGAGCTGCCACCTCCAAAAAAAATTCAGAGACAAGAAGAATCGAGGGCAATAGCTTTTATAAGCCATGGGGCAGCTGATGCAAATCCTCAGCGTTGGGCTGATGTAACTCGTTCAAAGAATCAGGTTTCTTGCCTATCCTCTTCTGAAGTATCAACATTATCTTTT VLLQSLAANTACVPLDLVILDAAMASFNGVLAFLAFSQAVHLMIGSSNLGYMIYFIFALVATFELWNCGSHVFGFVLMAFPKILFLAAFLLLLSFWVDLCHQANDEEDDDDDEENNTQQALLENSKNKPGSSNVDGHRRCCGFPATHLGSRQKIVIVVVILVFILMVAVSVLIWIGAGQNPIDSTAVARVYEDFLAVTVLLSGGALGFYGSLIPSAFLLWIMRELPPPKKIQRQEESRAIAFISHGAADANPQRWADVTRSKNQVSCLSSSEVSTLSF Homology
BLAST of MS014101 vs. NCBI nr
Match: XP_022149697.1 (tobamovirus multiplication protein 1 [Momordica charantia]) HSP 1 Score: 462.2 bits (1188), Expect = 3.1e-126 Identity = 264/355 (74.37%), Postives = 266/355 (74.93%), Query Frame = 0
BLAST of MS014101 vs. NCBI nr
Match: XP_031744161.1 (tobamovirus multiplication protein 1 [Cucumis sativus] >KAE8646881.1 hypothetical protein Csa_021074 [Cucumis sativus]) HSP 1 Score: 407.9 bits (1047), Expect = 6.9e-110 Identity = 229/355 (64.51%), Postives = 250/355 (70.42%), Query Frame = 0
BLAST of MS014101 vs. NCBI nr
Match: XP_038902574.1 (tobamovirus multiplication protein 1 [Benincasa hispida]) HSP 1 Score: 407.5 bits (1046), Expect = 9.1e-110 Identity = 233/356 (65.45%), Postives = 251/356 (70.51%), Query Frame = 0
BLAST of MS014101 vs. NCBI nr
Match: XP_008456345.1 (PREDICTED: tobamovirus multiplication protein 1 isoform X1 [Cucumis melo]) HSP 1 Score: 407.1 bits (1045), Expect = 1.2e-109 Identity = 229/355 (64.51%), Postives = 249/355 (70.14%), Query Frame = 0
BLAST of MS014101 vs. NCBI nr
Match: KAG6604727.1 (Tobamovirus multiplication protein 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 380.2 bits (975), Expect = 1.6e-101 Identity = 221/355 (62.25%), Postives = 245/355 (69.01%), Query Frame = 0
BLAST of MS014101 vs. ExPASy TrEMBL
Match: A0A6J1D8P5 (tobamovirus multiplication protein 1 OS=Momordica charantia OX=3673 GN=LOC111018062 PE=3 SV=1) HSP 1 Score: 462.2 bits (1188), Expect = 1.5e-126 Identity = 264/355 (74.37%), Postives = 266/355 (74.93%), Query Frame = 0
BLAST of MS014101 vs. ExPASy TrEMBL
Match: A0A1S3C2L2 (tobamovirus multiplication protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496312 PE=3 SV=1) HSP 1 Score: 407.1 bits (1045), Expect = 5.7e-110 Identity = 229/355 (64.51%), Postives = 249/355 (70.14%), Query Frame = 0
BLAST of MS014101 vs. ExPASy TrEMBL
Match: A0A6J1I3I8 (uncharacterized protein LOC111469590 OS=Cucurbita maxima OX=3661 GN=LOC111469590 PE=3 SV=1) HSP 1 Score: 379.8 bits (974), Expect = 9.8e-102 Identity = 220/355 (61.97%), Postives = 245/355 (69.01%), Query Frame = 0
BLAST of MS014101 vs. ExPASy TrEMBL
Match: A0A6J1G615 (uncharacterized protein LOC111451126 OS=Cucurbita moschata OX=3662 GN=LOC111451126 PE=3 SV=1) HSP 1 Score: 379.0 bits (972), Expect = 1.7e-101 Identity = 220/355 (61.97%), Postives = 245/355 (69.01%), Query Frame = 0
BLAST of MS014101 vs. ExPASy TrEMBL
Match: A0A1S3C336 (tobamovirus multiplication protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103496312 PE=3 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 7.8e-99 Identity = 205/301 (68.11%), Postives = 215/301 (71.43%), Query Frame = 0
BLAST of MS014101 vs. TAIR 10
Match: AT3G59090.1 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 196 Blast hits to 195 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 188; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 231.1 bits (588), Expect = 1.1e-60 Identity = 137/348 (39.37%), Postives = 184/348 (52.87%), Query Frame = 0
BLAST of MS014101 vs. TAIR 10
Match: AT3G59090.3 (LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 229.6 bits (584), Expect = 3.2e-60 Identity = 129/305 (42.30%), Postives = 171/305 (56.07%), Query Frame = 0
BLAST of MS014101 vs. TAIR 10
Match: AT3G59090.2 (CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1084 (InterPro:IPR009457); BEST Arabidopsis thaliana protein match is: tobamovirus multiplication 1 (TAIR:AT4G21790.1); Has 198 Blast hits to 197 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 190; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). ) HSP 1 Score: 228.4 bits (581), Expect = 7.0e-60 Identity = 135/347 (38.90%), Postives = 183/347 (52.74%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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