Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGAAGCAAACAAGCCTCTGCTCTCCTGTTCACTTTGCTTGCTGGGCTGCTCTCTCACAGCCTGGTCATCCCTGTATTCTCCTCCACCATTGCAGACCAGAAAAGCTATTACTCTCCAGACCCACATGCCGGAACTCCCCCAACAGGTCAGTCACTCAGACATTCACAAAAAAACACACTTAGTAGTTCAAGATCAAGATAGTAGATAGTAGTAGACTTACAACAATCCACATTTTGCATTGCAGGTACCCACAACAACCCTATGCCACCGCCACATGGCTATGGAGGCACGCCACCGCATCAGCCCACGCCTACGCCTTCGACACCGTTGAACCCCCCGTCTGGTGGTGGTGGATACTACAACCCTCCATCTTCTGGTGGTGGTAGCCCACCAACCACCCCTGTTGATCCCGGCACTCCGAGCATTCCAAGCACTCCACCCCCTGCTCCATTCACTGGTACCTGCAAGTAAGTCACTTACAGTAACTGTTTCCATGGAGAAGAAACCATCATCCTTTTTTCCTTTTTTGTTTGTTAAAGGTATGTGTGTTTGTTTGCAGTTATTGGCTGAATCACCCAGGAATGATATGGGGAGTGTTGGGATGGTGGGGAACGTTGGGAAATGCCTTTGGAGCAACTAATGTCCCAGGTTTTGGAACAAACCTCAACTTGCTCCAAGCACTTTCAAACACAAGGACTGATGGGTTTGGGGCCATTCTCCGAGAAGGCACTGCTTCGTACCTCAATTCTCTTGCCAACAACAGCTTCCCCTTCACAACCAAGCAAGTTAGATCAAGTTTTGTGTCAGCACTTAGCTCCAACAAAGCAGCAGCAGATCAGGCCAAGGTCTTTAAGTTAGCCAACGAGGGCAAACTTAAGCCCAGAGCC
mRNA sequence
ATGAGAAGCAAACAAGCCTCTGCTCTCCTGTTCACTTTGCTTGCTGGGCTGCTCTCTCACAGCCTGGTCATCCCTGTATTCTCCTCCACCATTGCAGACCAGAAAAGCTATTACTCTCCAGACCCACATGCCGGAACTCCCCCAACAGGTACCCACAACAACCCTATGCCACCGCCACATGGCTATGGAGGCACGCCACCGCATCAGCCCACGCCTACGCCTTCGACACCGTTGAACCCCCCGTCTGGTGGTGGTGGATACTACAACCCTCCATCTTCTGGTGGTGGTAGCCCACCAACCACCCCTGTTGATCCCGGCACTCCGAGCATTCCAAGCACTCCACCCCCTGCTCCATTCACTGGTACCTGCAATTATTGGCTGAATCACCCAGGAATGATATGGGGAGTGTTGGGATGGTGGGGAACGTTGGGAAATGCCTTTGGAGCAACTAATGTCCCAGGTTTTGGAACAAACCTCAACTTGCTCCAAGCACTTTCAAACACAAGGACTGATGGGTTTGGGGCCATTCTCCGAGAAGGCACTGCTTCGTACCTCAATTCTCTTGCCAACAACAGCTTCCCCTTCACAACCAAGCAAGTTAGATCAAGTTTTGTGTCAGCACTTAGCTCCAACAAAGCAGCAGCAGATCAGGCCAAGGTCTTTAAGTTAGCCAACGAGGGCAAACTTAAGCCCAGAGCC
Coding sequence (CDS)
ATGAGAAGCAAACAAGCCTCTGCTCTCCTGTTCACTTTGCTTGCTGGGCTGCTCTCTCACAGCCTGGTCATCCCTGTATTCTCCTCCACCATTGCAGACCAGAAAAGCTATTACTCTCCAGACCCACATGCCGGAACTCCCCCAACAGGTACCCACAACAACCCTATGCCACCGCCACATGGCTATGGAGGCACGCCACCGCATCAGCCCACGCCTACGCCTTCGACACCGTTGAACCCCCCGTCTGGTGGTGGTGGATACTACAACCCTCCATCTTCTGGTGGTGGTAGCCCACCAACCACCCCTGTTGATCCCGGCACTCCGAGCATTCCAAGCACTCCACCCCCTGCTCCATTCACTGGTACCTGCAATTATTGGCTGAATCACCCAGGAATGATATGGGGAGTGTTGGGATGGTGGGGAACGTTGGGAAATGCCTTTGGAGCAACTAATGTCCCAGGTTTTGGAACAAACCTCAACTTGCTCCAAGCACTTTCAAACACAAGGACTGATGGGTTTGGGGCCATTCTCCGAGAAGGCACTGCTTCGTACCTCAATTCTCTTGCCAACAACAGCTTCCCCTTCACAACCAAGCAAGTTAGATCAAGTTTTGTGTCAGCACTTAGCTCCAACAAAGCAGCAGCAGATCAGGCCAAGGTCTTTAAGTTAGCCAACGAGGGCAAACTTAAGCCCAGAGCC
Protein sequence
MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHAGTPPTGTHNNPMPPPHGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTPPPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA
Homology
BLAST of MS014094 vs. NCBI nr
Match:
XP_022149747.1 (protodermal factor 1-like [Momordica charantia])
HSP 1 Score: 459.1 bits (1180), Expect = 2.2e-125
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHAGTPPTGTHNNPMPPPH 60
MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHAGTPPTGTHNNPMPPPH
Sbjct: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHAGTPPTGTHNNPMPPPH 60
Query: 61 GYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTPPPAPFT 120
GYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTPPPAPFT
Sbjct: 61 GYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTPPPAPFT 120
Query: 121 GTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAILREG 180
GTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAILREG
Sbjct: 121 GTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAILREG 180
Query: 181 TASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA 234
TASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA
Sbjct: 181 TASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA 233
BLAST of MS014094 vs. NCBI nr
Match:
XP_038900371.1 (protodermal factor 1-like [Benincasa hispida])
HSP 1 Score: 385.6 bits (989), Expect = 3.1e-103
Identity = 203/246 (82.52%), Postives = 217/246 (88.21%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSP--DPHAGTPPTGTHNNPMPP 60
MR+KQAS LLFTLLAGLLS SL+IPVFS++IADQKSYYSP DPH+GTPPTG+H++P+PP
Sbjct: 1 MRTKQASVLLFTLLAGLLSQSLLIPVFSTSIADQKSYYSPPSDPHSGTPPTGSHSSPIPP 60
Query: 61 PHGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP---- 120
HGYGG+PPH TPTPSTP PPS GGGYYNPPSSGGGSPPTTPVDPGTPS PSTP
Sbjct: 61 SHGYGGSPPHYSTPTPSTPSKPPSSGGGYYNPPSSGGGSPPTTPVDPGTPSTPSTPGVPS 120
Query: 121 -------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSN 180
P PF TCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSN
Sbjct: 121 TPSTPSIPTTPF--TCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSN 180
Query: 181 TRTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEG 234
TRTDGFGA+LREGTASYLNSLA+N FPFTTKQVR+SFVSALSSNKAAADQA FKLANEG
Sbjct: 181 TRTDGFGALLREGTASYLNSLASNRFPFTTKQVRTSFVSALSSNKAAADQANTFKLANEG 240
BLAST of MS014094 vs. NCBI nr
Match:
XP_022947015.1 (protodermal factor 1-like [Cucurbita moschata])
HSP 1 Score: 359.4 bits (921), Expect = 2.4e-95
Identity = 194/251 (77.29%), Postives = 208/251 (82.87%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAGTPPTGTHNNPMPPP 60
MR+KQAS LLFTLLAGLLS SL+IPV S+TIADQKSYYS PDPHAGTPPTG+H+NP+PP
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP----- 120
HGYGGTPPH TPTPSTP PSGG GYYNPPS GGS PTTPVDPGTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPPS--GGSTPTTPVDPGTPSTPSTPSTPST 120
Query: 121 ---------------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNL 180
P PF TCN+WLNHPGMIWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 PSTPSTPSTPSTPGTPTTPF--TCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180
Query: 181 NLLQALSNTRTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAK 231
NLLQALSNTR DGFGA+LREGTASYLNSLA+N FPFTTKQV+SSFVSAL+SN+AAADQA
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240
BLAST of MS014094 vs. NCBI nr
Match:
XP_004143175.1 (protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_020699 [Cucumis sativus])
HSP 1 Score: 358.6 bits (919), Expect = 4.1e-95
Identity = 193/245 (78.78%), Postives = 212/245 (86.53%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAGTPPTGTHNNPMPPP 60
MRSKQ SAL+FTLLAGLLS SL+IPV S++IADQKSYYS PDPH+G+PP+G+H++PMPP
Sbjct: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
Query: 61 HGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP----- 120
HG GGT PH TPTPSTP NPPSGGGGYYNPPSS GGSPP+TPVDPGTPS PSTP
Sbjct: 61 HGSGGT-PHYSTPTPSTPSNPPSGGGGYYNPPSS-GGSPPSTPVDPGTPSTPSTPSVPST 120
Query: 121 ------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT 180
P PF TC YWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT
Sbjct: 121 PTTPTIPTIPF--TCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT 180
Query: 181 RTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGK 234
R DG+GA+LREGTASYLNSLA+N FP+TTKQVR+SFVSALSSNKAA +QA FKLANEGK
Sbjct: 181 RNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGK 240
BLAST of MS014094 vs. NCBI nr
Match:
KAG6604731.1 (Protodermal factor 1, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 357.1 bits (915), Expect = 1.2e-94
Identity = 193/251 (76.89%), Postives = 207/251 (82.47%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAGTPPTGTHNNPMPPP 60
MR+KQAS LLFTLLAGLLS SL+IPV S+TIADQKSYYS PDPHAGTPPTG+H+NP+PP
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP----- 120
HGYGGTPPH TPTPSTP PS G GYYNPPS GGS PTTPVDPGTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPTKSPSSGSGYYNPPS--GGSTPTTPVDPGTPSTPSTPSTPST 120
Query: 121 ---------------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNL 180
P PF TCN+WLNHPGMIWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 PSTPSTPSTPSTPGTPTTPF--TCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180
Query: 181 NLLQALSNTRTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAK 231
NLLQALSNTR DGFGA+LREGTASYLNSLA+N FPFTTKQV+SSFVSAL+SN+AAADQA
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240
BLAST of MS014094 vs. ExPASy Swiss-Prot
Match:
Q9S728 (Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1)
HSP 1 Score: 189.9 bits (481), Expect = 3.3e-47
Identity = 133/302 (44.04%), Postives = 160/302 (52.98%), Query Frame = 0
Query: 7 SALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHA--GTPPT--------------- 66
S ++ L A LLS L V S D K+YY P GTPP+
Sbjct: 6 SFAVWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYDP 65
Query: 67 --GTHNNPMPPPH---------------------------------GYGGTPPHQPTPTP 126
T ++P PP H + TP H TP+
Sbjct: 66 SPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSH 125
Query: 127 STPLNPPSGGGGYYN-----------PPSS--------GGGSPPTTPVDPGTPSIPSTPP 186
TP +PPS GGYY+ PPS GGSPPT +DPGTP P P
Sbjct: 126 PTPSHPPS--GGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIPA 185
Query: 187 P-APFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRT 233
P P TGTC+YW NHP +IWG+LGWWGT+G AFG +++PGF ++NLLQALSNTR+
Sbjct: 186 PFPPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRS 245
BLAST of MS014094 vs. ExPASy TrEMBL
Match:
A0A6J1D8U7 (protodermal factor 1-like OS=Momordica charantia OX=3673 GN=LOC111018104 PE=4 SV=1)
HSP 1 Score: 459.1 bits (1180), Expect = 1.1e-125
Identity = 233/233 (100.00%), Postives = 233/233 (100.00%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHAGTPPTGTHNNPMPPPH 60
MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHAGTPPTGTHNNPMPPPH
Sbjct: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHAGTPPTGTHNNPMPPPH 60
Query: 61 GYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTPPPAPFT 120
GYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTPPPAPFT
Sbjct: 61 GYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTPPPAPFT 120
Query: 121 GTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAILREG 180
GTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAILREG
Sbjct: 121 GTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNTRTDGFGAILREG 180
Query: 181 TASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA 234
TASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA
Sbjct: 181 TASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGKLKPRA 233
BLAST of MS014094 vs. ExPASy TrEMBL
Match:
A0A6J1G5M6 (protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=1)
HSP 1 Score: 359.4 bits (921), Expect = 1.2e-95
Identity = 194/251 (77.29%), Postives = 208/251 (82.87%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAGTPPTGTHNNPMPPP 60
MR+KQAS LLFTLLAGLLS SL+IPV S+TIADQKSYYS PDPHAGTPPTG+H+NP+PP
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP----- 120
HGYGGTPPH TPTPSTP PSGG GYYNPPS GGS PTTPVDPGTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPTKSPSGGSGYYNPPS--GGSTPTTPVDPGTPSTPSTPSTPST 120
Query: 121 ---------------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNL 180
P PF TCN+WLNHPGMIWGVLGWWGTLGN FGATNVPGFGTNL
Sbjct: 121 PSTPSTPSTPSTPGTPTTPF--TCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFGTNL 180
Query: 181 NLLQALSNTRTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAK 231
NLLQALSNTR DGFGA+LREGTASYLNSLA+N FPFTTKQV+SSFVSAL+SN+AAADQA
Sbjct: 181 NLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAADQAN 240
BLAST of MS014094 vs. ExPASy TrEMBL
Match:
A0A0A0KF76 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1)
HSP 1 Score: 358.6 bits (919), Expect = 2.0e-95
Identity = 193/245 (78.78%), Postives = 212/245 (86.53%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAGTPPTGTHNNPMPPP 60
MRSKQ SAL+FTLLAGLLS SL+IPV S++IADQKSYYS PDPH+G+PP+G+H++PMPP
Sbjct: 1 MRSKQVSALVFTLLAGLLSQSLLIPVLSTSIADQKSYYSPPDPHSGSPPSGSHSSPMPPS 60
Query: 61 HGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP----- 120
HG GGT PH TPTPSTP NPPSGGGGYYNPPSS GGSPP+TPVDPGTPS PSTP
Sbjct: 61 HGSGGT-PHYSTPTPSTPSNPPSGGGGYYNPPSS-GGSPPSTPVDPGTPSTPSTPSVPST 120
Query: 121 ------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT 180
P PF TC YWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT
Sbjct: 121 PTTPTIPTIPF--TCTYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT 180
Query: 181 RTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGK 234
R DG+GA+LREGTASYLNSLA+N FP+TTKQVR+SFVSALSSNKAA +QA FKLANEGK
Sbjct: 181 RNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGNQANTFKLANEGK 240
BLAST of MS014094 vs. ExPASy TrEMBL
Match:
A0A6J1I3W1 (protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1)
HSP 1 Score: 356.7 bits (914), Expect = 7.5e-95
Identity = 194/254 (76.38%), Postives = 208/254 (81.89%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAGTPPTGTHNNPMPPP 60
MR+KQAS LLFTLLAGLLS SL+IPV S+TIADQKSYYS PDPHAGTPPTG+H+NP+PP
Sbjct: 1 MRTKQASPLLFTLLAGLLSQSLLIPVLSTTIADQKSYYSPPDPHAGTPPTGSHSNPIPPS 60
Query: 61 HGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP----- 120
HGYGGTPPH TPTPSTP PSG GYYNPPSS GGS PTTPVDPGTPS PSTP
Sbjct: 61 HGYGGTPPHYSTPTPSTPSKSPSGRSGYYNPPSS-GGSTPTTPVDPGTPSTPSTPSTPST 120
Query: 121 ------------------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFG 180
P PF TCN+WLNHPGMIWGVLGWWGTLGN FGATNVPGFG
Sbjct: 121 PSTPSTPSTPSTPSTPGTPTTPF--TCNFWLNHPGMIWGVLGWWGTLGNCFGATNVPGFG 180
Query: 181 TNLNLLQALSNTRTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAAD 231
TNLNLLQALSNTR DGFGA+LREGTASYLNSLA+N FPFTTKQV+SSFVSAL+SN+AAAD
Sbjct: 181 TNLNLLQALSNTRADGFGALLREGTASYLNSLASNRFPFTTKQVQSSFVSALNSNRAAAD 240
BLAST of MS014094 vs. ExPASy TrEMBL
Match:
A0A5A7UHX0 (Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold22G00090 PE=4 SV=1)
HSP 1 Score: 350.9 bits (899), Expect = 4.1e-93
Identity = 192/245 (78.37%), Postives = 209/245 (85.31%), Query Frame = 0
Query: 1 MRSKQASALLFTLLAGLLSHSLVIPVFSSTIADQKSYYS-PDPHAGTPPTGTHNNPMPPP 60
MRSKQASALLFTLLAGLLS SL+IPV S++I DQKSYYS PDPH+G+PP+G+H +P+PP
Sbjct: 1 MRSKQASALLFTLLAGLLSQSLLIPVLSTSITDQKSYYSPPDPHSGSPPSGSHGSPIPPS 60
Query: 61 HGYGGTPPHQPTPTPSTPLNPPSGGGGYYNPPSSGGGSPPTTPVDPGTPSIPSTP----- 120
HG GGT PH TPTPST PSGGGGYYNPPSS GGSPP+TPVDPGTPS PSTP
Sbjct: 61 HGNGGT-PHYSTPTPST----PSGGGGYYNPPSS-GGSPPSTPVDPGTPSTPSTPSVPST 120
Query: 121 ------PPAPFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT 180
P PF TCNYWLNHPG+IWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT
Sbjct: 121 PSTPTIPTTPF--TCNYWLNHPGLIWGVLGWWGTLGNAFGATNVPGFGTNLNLLQALSNT 180
Query: 181 RTDGFGAILREGTASYLNSLANNSFPFTTKQVRSSFVSALSSNKAAADQAKVFKLANEGK 234
R DG+GA+LREGTASYLNSLA+N FP+TTKQVR+SFVSALSSNKAA DQA FKLANEGK
Sbjct: 181 RNDGYGALLREGTASYLNSLASNRFPYTTKQVRTSFVSALSSNKAAGDQANTFKLANEGK 237
BLAST of MS014094 vs. TAIR 10
Match:
AT2G42840.1 (protodermal factor 1 )
HSP 1 Score: 189.9 bits (481), Expect = 2.3e-48
Identity = 133/302 (44.04%), Postives = 160/302 (52.98%), Query Frame = 0
Query: 7 SALLFTLLAGLLSHSLVIPVFSSTIADQKSYYSPDPHA--GTPPT--------------- 66
S ++ L A LLS L V S D K+YY P GTPP+
Sbjct: 6 SFAVWALFAALLSQQLFASVASVRFEDAKTYYLSPPSGSHGTPPSHTPPSSNCGSPPYDP 65
Query: 67 --GTHNNPMPPPH---------------------------------GYGGTPPHQPTPTP 126
T ++P PP H + TP H TP+
Sbjct: 66 SPSTPSHPSPPSHTPTPSTPSHTPTPHTPSHTPTPHTPPCNCGSPPSHPSTPSHPSTPSH 125
Query: 127 STPLNPPSGGGGYYN-----------PPSS--------GGGSPPTTPVDPGTPSIPSTPP 186
TP +PPS GGYY+ PPS GGSPPT +DPGTP P P
Sbjct: 126 PTPSHPPS--GGYYSSPPPRTPVVVTPPSPIVDPGTPIIGGSPPTPIIDPGTPGTPFIPA 185
Query: 187 P-APFTGTCNYWLNHPGMIWGVLGWWGTLGNAFGA----TNVPGFGTNLNLLQALSNTRT 233
P P TGTC+YW NHP +IWG+LGWWGT+G AFG +++PGF ++NLLQALSNTR+
Sbjct: 186 PFPPITGTCDYWRNHPTLIWGLLGWWGTVGGAFGTVSIPSSIPGFDPHMNLLQALSNTRS 245
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022149747.1 | 2.2e-125 | 100.00 | protodermal factor 1-like [Momordica charantia] | [more] |
XP_038900371.1 | 3.1e-103 | 82.52 | protodermal factor 1-like [Benincasa hispida] | [more] |
XP_022947015.1 | 2.4e-95 | 77.29 | protodermal factor 1-like [Cucurbita moschata] | [more] |
XP_004143175.1 | 4.1e-95 | 78.78 | protodermal factor 1 [Cucumis sativus] >KGN47037.1 hypothetical protein Csa_0206... | [more] |
KAG6604731.1 | 1.2e-94 | 76.89 | Protodermal factor 1, partial [Cucurbita argyrosperma subsp. sororia] | [more] |
Match Name | E-value | Identity | Description | |
Q9S728 | 3.3e-47 | 44.04 | Protodermal factor 1 OS=Arabidopsis thaliana OX=3702 GN=PDF1 PE=2 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1D8U7 | 1.1e-125 | 100.00 | protodermal factor 1-like OS=Momordica charantia OX=3673 GN=LOC111018104 PE=4 SV... | [more] |
A0A6J1G5M6 | 1.2e-95 | 77.29 | protodermal factor 1-like OS=Cucurbita moschata OX=3662 GN=LOC111451018 PE=4 SV=... | [more] |
A0A0A0KF76 | 2.0e-95 | 78.78 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G178950 PE=4 SV=1 | [more] |
A0A6J1I3W1 | 7.5e-95 | 76.38 | protodermal factor 1-like OS=Cucurbita maxima OX=3661 GN=LOC111469672 PE=4 SV=1 | [more] |
A0A5A7UHX0 | 4.1e-93 | 78.37 | Protodermal factor 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo... | [more] |
Match Name | E-value | Identity | Description | |
AT2G42840.1 | 2.3e-48 | 44.04 | protodermal factor 1 | [more] |