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MS014056 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGTTTCAACCTCTTTTCGTGTGTTAATTCTTCTCTTTATTTTTTCCACTCTTTTGATGATATCACAAGGACATGTTCTTCGTTTTGAAAAACAAAAGGACATAAGCAGTCAACGTCTTTTGCAAGAATTTAAATTTGATGTCTTTAAGATCGAGCGGAGGTCTCTCATTACGTCGGAAAGAATTGTACCAGGTGGACCAGATCCAAAGCACCAT ATGGCTGTTTCAACCTCTTTTCGTGTGTTAATTCTTCTCTTTATTTTTTCCACTCTTTTGATGATATCACAAGGACATGTTCTTCGTTTTGAAAAACAAAAGGACATAAGCAGTCAACGTCTTTTGCAAGAATTTAAATTTGATGTCTTTAAGATCGAGCGGAGGTCTCTCATTACGTCGGAAAGAATTGTACCAGGTGGACCAGATCCAAAGCACCAT ATGGCTGTTTCAACCTCTTTTCGTGTGTTAATTCTTCTCTTTATTTTTTCCACTCTTTTGATGATATCACAAGGACATGTTCTTCGTTTTGAAAAACAAAAGGACATAAGCAGTCAACGTCTTTTGCAAGAATTTAAATTTGATGTCTTTAAGATCGAGCGGAGGTCTCTCATTACGTCGGAAAGAATTGTACCAGGTGGACCAGATCCAAAGCACCAT MAVSTSFRVLILLFIFSTLLMISQGHVLRFEKQKDISSQRLLQEFKFDVFKIERRSLITSERIVPGGPDPKHH Homology
BLAST of MS014056 vs. NCBI nr
Match: XP_022149633.1 (CLAVATA3/ESR (CLE)-related protein 6-like [Momordica charantia]) HSP 1 Score: 137.1 bits (344), Expect = 6.0e-29 Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of MS014056 vs. NCBI nr
Match: KAE8076036.1 (hypothetical protein FH972_014710 [Carpinus fangiana]) HSP 1 Score: 58.2 bits (139), Expect = 3.5e-05 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of MS014056 vs. NCBI nr
Match: XP_002879304.1 (CLAVATA3/ESR (CLE)-related protein 5 [Arabidopsis lyrata subsp. lyrata] >EFH55563.1 hypothetical protein ARALYDRAFT_482035 [Arabidopsis lyrata subsp. lyrata]) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of MS014056 vs. NCBI nr
Match: KAG7568811.1 (hypothetical protein ISN45_Aa04g015960 [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7573186.1 hypothetical protein ISN44_As09g015020 [Arabidopsis suecica]) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of MS014056 vs. NCBI nr
Match: NP_565713.1 (CLAVATA3/ESR-RELATED 6 [Arabidopsis thaliana] >Q8S8N3.1 RecName: Full=CLAVATA3/ESR (CLE)-related protein 6; Contains: RecName: Full=CLE6p; Flags: Precursor [Arabidopsis thaliana] >KAG7638053.1 hypothetical protein ISN45_At02g025340 [Arabidopsis thaliana x Arabidopsis arenosa] >KAG7642676.1 hypothetical protein ISN44_As02g025650 [Arabidopsis suecica] >AAM15025.1 CLE4 [Arabidopsis thaliana] >AAM67246.1 unknown [Arabidopsis thaliana] >AEC08491.1 CLAVATA3/ESR-RELATED 6 [Arabidopsis thaliana]) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-04 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of MS014056 vs. ExPASy Swiss-Prot
Match: Q8S8N3 (CLAVATA3/ESR (CLE)-related protein 6 OS=Arabidopsis thaliana OX=3702 GN=CLE6 PE=2 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 1.8e-07 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of MS014056 vs. ExPASy Swiss-Prot
Match: Q8S8N2 (CLAVATA3/ESR (CLE)-related protein 5 OS=Arabidopsis thaliana OX=3702 GN=CLE5 PE=2 SV=2) HSP 1 Score: 53.9 bits (128), Expect = 8.8e-07 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of MS014056 vs. ExPASy TrEMBL
Match: A0A6J1D7A7 (CLAVATA3/ESR (CLE)-related protein 6-like OS=Momordica charantia OX=3673 GN=LOC111018019 PE=4 SV=1) HSP 1 Score: 137.1 bits (344), Expect = 2.9e-29 Identity = 72/73 (98.63%), Postives = 72/73 (98.63%), Query Frame = 0
BLAST of MS014056 vs. ExPASy TrEMBL
Match: A0A5N6RCE3 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_014710 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.7e-05 Identity = 41/81 (50.62%), Postives = 53/81 (65.43%), Query Frame = 0
BLAST of MS014056 vs. ExPASy TrEMBL
Match: A0A178VSR3 (CLE6 OS=Arabidopsis thaliana OX=3702 GN=AXX17_At2g27260 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.5e-05 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of MS014056 vs. ExPASy TrEMBL
Match: D7LCY8 (Uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_482035 PE=3 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 6.5e-05 Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
BLAST of MS014056 vs. ExPASy TrEMBL
Match: A0A6D2KM98 (Uncharacterized protein OS=Microthlaspi erraticum OX=1685480 GN=MERR_LOCUS37466 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 1.1e-04 Identity = 31/74 (41.89%), Postives = 48/74 (64.86%), Query Frame = 0
BLAST of MS014056 vs. TAIR 10
Match: AT2G31085.1 (CLAVATA3/ESR-RELATED 6 ) HSP 1 Score: 56.2 bits (134), Expect = 1.3e-08 Identity = 33/72 (45.83%), Postives = 46/72 (63.89%), Query Frame = 0
BLAST of MS014056 vs. TAIR 10
Match: AT2G31083.1 (CLAVATA3/ESR-RELATED 5 ) HSP 1 Score: 53.9 bits (128), Expect = 6.2e-08 Identity = 32/72 (44.44%), Postives = 45/72 (62.50%), Query Frame = 0
BLAST of MS014056 vs. TAIR 10
Match: AT2G31082.1 (CLAVATA3/ESR-RELATED 7 ) HSP 1 Score: 40.4 bits (93), Expect = 7.1e-04 Identity = 27/71 (38.03%), Postives = 41/71 (57.75%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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