MS014010 (gene) Bitter gourd (TR) v1

Overview


Name	MS014010
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	C2H2-type domain-containing protein
Location	scaffold607: 1599512 .. 1600234 (+)
RNA-Seq Expression	MS014010
Synteny	MS014010

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAGAGCCCAAACGCTGCTGGATGATGTGGGAAAACAAGAAGAAGACCATCAAGAGGAATTTGACGGCCGGTAGTTCTGATCATCACTTTGATCAATCAAAAGCTTCTTCGTCTTTCGACGATTCGTGGGAGGAACAAGCTTTCGCGGAGGACACCGCCGGGCATCTCGGTGGCGGTGGCTGTGTTTGGCCACCAAGATCCTACTCCTGCAGCTTTTGCAAGAGGGAATTCCGATCTGCTCAAGCGCTCGGCGGTCACATGAATGTTCACCGCCGTGACCGGGCGAGATTAAAGCATGAATCTTTCAAACCCCAGATTGAAACCCATCAAATTCCCCCACAAAACAACCCCTTTCCCTTTACCCCATCTTCTGAAACGGTATGCGATGATAATTTGGTCGGCTACAATAACCCTAACCCTAGATCTTCATCTTCTTCTTTCCTCTCAGTCTTGCCCACGCAAAACGTGGAAAAATCTGATCTTACCCCAATAACCCTCAATAAATTTCATCAAAGTTCAGAGCTTTCCAAAAAAGCAAGTGATCTCATGGACAATATCGATGCAGTTTGTTGCAAGAGAAAGAGAACAGATGCGGCGTCGACGGTGGCTTTCATTTTTCGATCAGAGGTACTTGGACTCAGCCATGGCTCCGTCGAGGACTTGGATCTTGAGCTCAGGCTCGGTGGCGGTGGCAGTGGCGGCCGGCCAAAGCCAAAGCTAAAA

mRNA sequence

GAAGAGCCCAAACGCTGCTGGATGATGTGGGAAAACAAGAAGAAGACCATCAAGAGGAATTTGACGGCCGGTAGTTCTGATCATCACTTTGATCAATCAAAAGCTTCTTCGTCTTTCGACGATTCGTGGGAGGAACAAGCTTTCGCGGAGGACACCGCCGGGCATCTCGGTGGCGGTGGCTGTGTTTGGCCACCAAGATCCTACTCCTGCAGCTTTTGCAAGAGGGAATTCCGATCTGCTCAAGCGCTCGGCGGTCACATGAATGTTCACCGCCGTGACCGGGCGAGATTAAAGCATGAATCTTTCAAACCCCAGATTGAAACCCATCAAATTCCCCCACAAAACAACCCCTTTCCCTTTACCCCATCTTCTGAAACGGTATGCGATGATAATTTGGTCGGCTACAATAACCCTAACCCTAGATCTTCATCTTCTTCTTTCCTCTCAGTCTTGCCCACGCAAAACGTGGAAAAATCTGATCTTACCCCAATAACCCTCAATAAATTTCATCAAAGTTCAGAGCTTTCCAAAAAAGCAAGTGATCTCATGGACAATATCGATGCAGTTTGTTGCAAGAGAAAGAGAACAGATGCGGCGTCGACGGTGGCTTTCATTTTTCGATCAGAGGTACTTGGACTCAGCCATGGCTCCGTCGAGGACTTGGATCTTGAGCTCAGGCTCGGTGGCGGTGGCAGTGGCGGCCGGCCAAAGCCAAAGCTAAAA

Coding sequence (CDS)

GAAGAGCCCAAACGCTGCTGGATGATGTGGGAAAACAAGAAGAAGACCATCAAGAGGAATTTGACGGCCGGTAGTTCTGATCATCACTTTGATCAATCAAAAGCTTCTTCGTCTTTCGACGATTCGTGGGAGGAACAAGCTTTCGCGGAGGACACCGCCGGGCATCTCGGTGGCGGTGGCTGTGTTTGGCCACCAAGATCCTACTCCTGCAGCTTTTGCAAGAGGGAATTCCGATCTGCTCAAGCGCTCGGCGGTCACATGAATGTTCACCGCCGTGACCGGGCGAGATTAAAGCATGAATCTTTCAAACCCCAGATTGAAACCCATCAAATTCCCCCACAAAACAACCCCTTTCCCTTTACCCCATCTTCTGAAACGGTATGCGATGATAATTTGGTCGGCTACAATAACCCTAACCCTAGATCTTCATCTTCTTCTTTCCTCTCAGTCTTGCCCACGCAAAACGTGGAAAAATCTGATCTTACCCCAATAACCCTCAATAAATTTCATCAAAGTTCAGAGCTTTCCAAAAAAGCAAGTGATCTCATGGACAATATCGATGCAGTTTGTTGCAAGAGAAAGAGAACAGATGCGGCGTCGACGGTGGCTTTCATTTTTCGATCAGAGGTACTTGGACTCAGCCATGGCTCCGTCGAGGACTTGGATCTTGAGCTCAGGCTCGGTGGCGGTGGCAGTGGCGGCCGGCCAAAGCCAAAGCTAAAA

Protein sequence

EEPKRCWMMWENKKKTIKRNLTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFPFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELSKKASDLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLGGGGSGGRPKPKLK

Homology

[Close]

BLAST of MS014010 vs. NCBI nr
Match: XP_022143921.1 (transcriptional regulator SUPERMAN-like [Momordica charantia])

HSP 1 Score: 488.4 bits (1256), Expect = 3.5e-134
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   EEPKRCWMMWENKKKTIKRNLTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHLGGGG 60
           EEPKRCWMMWENKKKTIKRNLTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHL G G
Sbjct: 4   EEPKRCWMMWENKKKTIKRNLTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHLSGSG 63

Query: 61  CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFPF 120
           CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFPF
Sbjct: 64  CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFPF 123

Query: 121 TPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELSKKAS 180
           TPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELSKKAS
Sbjct: 124 TPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELSKKAS 183

Query: 181 DLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLGGGGSGGRPKPKL 240
           DLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLGGGGSGGRPKPKL
Sbjct: 184 DLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLGGGGSGGRPKPKL 243

Query: 241 K 242
           K
Sbjct: 244 K 244

[Close]

BLAST of MS014010 vs. NCBI nr
Match: XP_004142197.1 (probable transcriptional regulator RABBIT EARS [Cucumis sativus] >KGN54274.1 hypothetical protein Csa_018178 [Cucumis sativus])

HSP 1 Score: 299.3 bits (765), Expect = 3.0e-77
Identity = 178/259 (68.73%), Postives = 197/259 (76.06%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRNLTAGSSDHHFDQS----KASSSFDDSWEEQAFAEDTAGHLG 61
           EPKRCWMMWE KKK  K+NL   SSDHHF Q+    K+SSSFDDSWEEQAFA+D AG L 
Sbjct: 2   EPKRCWMMWEKKKK--KKNLITTSSDHHFLQATTTIKSSSSFDDSWEEQAFADDAAGRL- 61

Query: 62  GGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH-QIPPQNN 121
            GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH QIPP  +
Sbjct: 62  -GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTLH 121

Query: 122 PFPFTPSSETVCDDNLVGYNNPNPRSSSSSF-LSVLPTQNVEKSDLTPI-----TLNKFH 181
                   + VCDDNLV   +PNP+SSSSSF LS  P+QN+ +SDLTP+     TL+K+H
Sbjct: 122 --------QQVCDDNLV--FSPNPKSSSSSFCLSTFPSQNLVESDLTPLTTTAATLHKWH 181

Query: 182 QSSELSKKASD----LMDNIDAVCC-KRKRT---DAASTVAFIFRSEVLGLSHGSVEDLD 241
           QSS+LS+K SD    L D   AV C KRKRT     +STVAFIFRSEV+GLSH SVEDLD
Sbjct: 182 QSSDLSQKTSDDNDLLRDEEAAVFCNKRKRTSDHSPSSTVAFIFRSEVIGLSHSSVEDLD 240

[Close]

BLAST of MS014010 vs. NCBI nr
Match: XP_008448173.1 (PREDICTED: probable transcriptional regulator RABBIT EARS [Cucumis melo] >XP_008448184.1 PREDICTED: probable transcriptional regulator RABBIT EARS [Cucumis melo] >KAA0032675.1 putative transcriptional regulator RABBIT EARS [Cucumis melo var. makuwa] >TYK23558.1 putative transcriptional regulator RABBIT EARS [Cucumis melo var. makuwa])

HSP 1 Score: 296.2 bits (757), Expect = 2.6e-76
Identity = 175/260 (67.31%), Postives = 192/260 (73.85%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRNLTAGSSDHHFDQS------KASSSFDDSWEEQAFAEDTAGH 61
           EPKRCWMMWE KKK  K+NL   SSDHHF Q+       +SSSFDDSWEEQAFA+D AG 
Sbjct: 2   EPKRCWMMWEKKKK--KKNLITTSSDHHFLQATTTTIKSSSSSFDDSWEEQAFADDAAGR 61

Query: 62  LGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH-QIPPQ 121
           L  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH QIPP 
Sbjct: 62  L--GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPP- 121

Query: 122 NNPFPFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPI-----TLNKF 181
                     + VCDDNLV   NPNP+SSSS  LS  P+QN+ +SDLTP+     TL+K+
Sbjct: 122 -------TLQQQVCDDNLV--FNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTATLHKW 181

Query: 182 HQSSELSKKASD----LMDNIDAVCC-KRKRT---DAASTVAFIFRSEVLGLSHGSVEDL 241
           HQSS+LS+K SD    L D   AV C KRKRT     +STVAF FRSEV+GLSH SVEDL
Sbjct: 182 HQSSDLSQKTSDDNDLLKDEEAAVFCNKRKRTSDHSPSSTVAFFFRSEVIGLSHSSVEDL 241

[Close]

BLAST of MS014010 vs. NCBI nr
Match: XP_038883849.1 (probable transcriptional regulator RABBIT EARS [Benincasa hispida])

HSP 1 Score: 290.4 bits (742), Expect = 1.4e-74
Identity = 173/257 (67.32%), Postives = 188/257 (73.15%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRNLTAGSSDHHFDQS---------KASSSFDDSWEEQAFAEDT 61
           EPKRCWMM E K K  K+NL   +S  HF Q+          +SSSFDDSWEEQAFA+D 
Sbjct: 2   EPKRCWMMLEKKNKK-KKNLMITTSSDHFLQATTTTININKSSSSSFDDSWEEQAFADDA 61

Query: 62  AGHLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIET-HQI 121
           AG L  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIET HQI
Sbjct: 62  AGRL--GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHHQI 121

Query: 122 PPQNNPFPFTPSSETVCDDNLVGYNNPNPRSSSSSF-LSVLPTQNVEKSDLTPI---TLN 181
            P           + VCDDNLV   NPNP+SSSSSF LS  P+QN+ +SDLTPI   TL+
Sbjct: 122 LPN--------LQQQVCDDNLV--FNPNPKSSSSSFCLSTFPSQNLVESDLTPITTTTLH 181

Query: 182 KFHQSSELSKKASDLMDNIDAVCCKRKRT---DAASTVAFIFRSEVLGLSHGSVEDLDLE 241
           K+HQSSELS K SD  D+    C KRKRT     +STVAF  RSEV+GLSH SVEDLDLE
Sbjct: 182 KWHQSSELSPKTSDDKDDDAVFCNKRKRTTDHPPSSTVAFFIRSEVIGLSHSSVEDLDLE 241

[Close]

BLAST of MS014010 vs. NCBI nr
Match: XP_022931921.1 (transcriptional regulator SUPERMAN-like [Cucurbita moschata])

HSP 1 Score: 273.5 bits (698), Expect = 1.8e-69
Identity = 161/252 (63.89%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRN---LTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHLGG 61
           EPK CWMMWENK +   +N   LT  +SDH    +  +SSFDDSWEEQAFA+D AG L  
Sbjct: 4   EPKPCWMMWENKNQNENKNENRLTT-ASDH---LNNKASSFDDSWEEQAFADDAAGRL-- 63

Query: 62  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH-QIPPQNNP 121
           GGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKHESFKPQIETH QIPP+NNP
Sbjct: 64  GGCVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKNNP 123

Query: 122 F------PFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQ 181
           F      P  PSS+ VCD+NL    NPNP+SS +S         V++SD      +K+ Q
Sbjct: 124 FTSLIDLPQHPSSQFVCDENLA--FNPNPKSSQNS---------VDESD------HKWRQ 183

Query: 182 SSELSKKASDLMDNIDAVCCKRKRTD--AASTVAFIFRSEVLGLSHGSVEDLDLELRLGG 241
           S +LS K +DL  + DAVCCKRKR+D  + STVAF+ RSEV+GLSH S+EDLDLELRLG 
Sbjct: 184 SLDLSIKTTDLFKD-DAVCCKRKRSDHHSTSTVAFVLRSEVIGLSHNSIEDLDLELRLGD 230

[Close]

BLAST of MS014010 vs. ExPASy Swiss-Prot
Match: Q9LHS9 (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 104.8 bits (260), Expect = 1.4e-21
Identity = 80/203 (39.41%), Postives = 102/203 (50.25%), Query Frame = 0


Query: 44  EEQAFAEDTAGHLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFK 103
           EE+AFA     + GGGGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK +S  
Sbjct: 32  EERAFA-SAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS 91

Query: 104 PQIETHQIPPQNNPFPFTPSSETVCDDN---LVGYNNPNPRSSSSSFLSVLPTQNVE--- 163
           P       PP+          + V D     LV      P  +      V     +E   
Sbjct: 92  PSSTDQATPPE------CDRQQQVLDVGSKVLVQEETRKPNGTKREISDVCNNNVLESSM 151

Query: 164 ----------KSDLTPITLNKFHQSSELSKKASDLMDNIDAVCCKRKRTDAASTVAFIFR 223
                     K+DL+   L     S+E   +   L+ N  +   KR +TD +     +  
Sbjct: 152 KRYEHDNGEVKTDLSVGLL-----STEFDPRKKQLI-NGSSSSWKRAKTDVSRFPMML-- 211

Query: 224 SEVLGLS--HGSVEDLDLELRLG 229
             V+G+S  +G  E+LDLELRLG
Sbjct: 212 GLVIGISEINGHHEELDLELRLG 219

[Close]

BLAST of MS014010 vs. ExPASy Swiss-Prot
Match: O80942 (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.1e-18
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 37  SSFDDSWEEQAFAEDTAGHLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR 96
           S+ + SWEE AFAED A      G +WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRAR
Sbjct: 13  SNKESSWEELAFAEDDA-----AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 72

Query: 97  LKHESFKPQIETHQIPPQNNPFPFTPS 124
           LK      Q +   + P+++  P  PS
Sbjct: 73  LK------QADDQYLFPKSSSSPEYPS 88

[Close]

BLAST of MS014010 vs. ExPASy Swiss-Prot
Match: Q38895 (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 5.6e-18
Identity = 71/172 (41.28%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 60  GCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNP-- 119
           G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ +   P   +   PP  NP  
Sbjct: 39  GFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ-SPSSSSTPSPPYPNPNY 98

Query: 120 -FPFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELS 179
            +    +S       L  +   +P  SS  + + L      KS  TP    K  +SS L 
Sbjct: 99  SYSTMANSPPPHHSPLTLFPTLSP-PSSPRYRAGLIRSLSPKSKHTPENACKTKKSS-LL 158

Query: 180 KKASDLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLG 229
            +A +         CK  R D   ++        +GL + S +DLDLELRLG
Sbjct: 159 VEAGEATRFTSKDACKILRNDEIISLEL-----EIGLINESEQDLDLELRLG 202

[Close]

BLAST of MS014010 vs. ExPASy Swiss-Prot
Match: Q9SLB8 (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 5.8e-15
Identity = 66/172 (38.37%), Postives = 91/172 (52.91%), Query Frame = 0


Query: 63  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFP-FT 122
           WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+ +      E H   P  NP P F+
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR-QIPSWLFEPHHHTPIANPNPNFS 103

Query: 123 PSSETVCDDNLVGYNNPNPRSSSSSFLS----VLPTQNVEKSDLTPITLNKFHQSSELSK 182
            SS +      +  +  N RS ++ F S    +L +       +     NK +  S   K
Sbjct: 104 SSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSREIK 163

Query: 183 KASDLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLS-HGSVEDLDLELRLG 229
           K++  +D   +V C+  R D  +          LG+S     + LDLELRLG
Sbjct: 164 KSA--IDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLG 212

[Close]

BLAST of MS014010 vs. ExPASy Swiss-Prot
Match: Q9SR34 (Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1)

HSP 1 Score: 58.9 bits (141), Expect = 9.0e-08
Identity = 27/46 (58.70%), Postives = 33/46 (71.74%), Query Frame = 0


Query: 55  HLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHE 101
           H G    +   RSY CSFC R F +AQALGGHMN+HRRDRA+L+ +
Sbjct: 22  HQGVDDSLNQSRSYVCSFCIRGFSNAQALGGHMNIHRRDRAKLRQK 67

[Close]

BLAST of MS014010 vs. ExPASy TrEMBL
Match: A0A6J1CRR7 (transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111013721 PE=4 SV=1)

HSP 1 Score: 488.4 bits (1256), Expect = 1.7e-134
Identity = 239/241 (99.17%), Postives = 239/241 (99.17%), Query Frame = 0


Query: 1   EEPKRCWMMWENKKKTIKRNLTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHLGGGG 60
           EEPKRCWMMWENKKKTIKRNLTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHL G G
Sbjct: 4   EEPKRCWMMWENKKKTIKRNLTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHLSGSG 63

Query: 61  CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFPF 120
           CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFPF
Sbjct: 64  CVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFPF 123

Query: 121 TPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELSKKAS 180
           TPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELSKKAS
Sbjct: 124 TPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELSKKAS 183

Query: 181 DLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLGGGGSGGRPKPKL 240
           DLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLGGGGSGGRPKPKL
Sbjct: 184 DLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLGGGGSGGRPKPKL 243

Query: 241 K 242
           K
Sbjct: 244 K 244

[Close]

BLAST of MS014010 vs. ExPASy TrEMBL
Match: A0A0A0KZM8 (C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296275 PE=4 SV=1)

HSP 1 Score: 299.3 bits (765), Expect = 1.5e-77
Identity = 178/259 (68.73%), Postives = 197/259 (76.06%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRNLTAGSSDHHFDQS----KASSSFDDSWEEQAFAEDTAGHLG 61
           EPKRCWMMWE KKK  K+NL   SSDHHF Q+    K+SSSFDDSWEEQAFA+D AG L 
Sbjct: 2   EPKRCWMMWEKKKK--KKNLITTSSDHHFLQATTTIKSSSSFDDSWEEQAFADDAAGRL- 61

Query: 62  GGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH-QIPPQNN 121
            GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH QIPP  +
Sbjct: 62  -GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPPTLH 121

Query: 122 PFPFTPSSETVCDDNLVGYNNPNPRSSSSSF-LSVLPTQNVEKSDLTPI-----TLNKFH 181
                   + VCDDNLV   +PNP+SSSSSF LS  P+QN+ +SDLTP+     TL+K+H
Sbjct: 122 --------QQVCDDNLV--FSPNPKSSSSSFCLSTFPSQNLVESDLTPLTTTAATLHKWH 181

Query: 182 QSSELSKKASD----LMDNIDAVCC-KRKRT---DAASTVAFIFRSEVLGLSHGSVEDLD 241
           QSS+LS+K SD    L D   AV C KRKRT     +STVAFIFRSEV+GLSH SVEDLD
Sbjct: 182 QSSDLSQKTSDDNDLLRDEEAAVFCNKRKRTSDHSPSSTVAFIFRSEVIGLSHSSVEDLD 240

[Close]

BLAST of MS014010 vs. ExPASy TrEMBL
Match: A0A1S3BJY1 (probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103490450 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.2e-76
Identity = 175/260 (67.31%), Postives = 192/260 (73.85%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRNLTAGSSDHHFDQS------KASSSFDDSWEEQAFAEDTAGH 61
           EPKRCWMMWE KKK  K+NL   SSDHHF Q+       +SSSFDDSWEEQAFA+D AG 
Sbjct: 2   EPKRCWMMWEKKKK--KKNLITTSSDHHFLQATTTTIKSSSSSFDDSWEEQAFADDAAGR 61

Query: 62  LGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH-QIPPQ 121
           L  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH QIPP 
Sbjct: 62  L--GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPP- 121

Query: 122 NNPFPFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPI-----TLNKF 181
                     + VCDDNLV   NPNP+SSSS  LS  P+QN+ +SDLTP+     TL+K+
Sbjct: 122 -------TLQQQVCDDNLV--FNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTATLHKW 181

Query: 182 HQSSELSKKASD----LMDNIDAVCC-KRKRT---DAASTVAFIFRSEVLGLSHGSVEDL 241
           HQSS+LS+K SD    L D   AV C KRKRT     +STVAF FRSEV+GLSH SVEDL
Sbjct: 182 HQSSDLSQKTSDDNDLLKDEEAAVFCNKRKRTSDHSPSSTVAFFFRSEVIGLSHSSVEDL 241

[Close]

BLAST of MS014010 vs. ExPASy TrEMBL
Match: A0A5A7STW0 (Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G00660 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.2e-76
Identity = 175/260 (67.31%), Postives = 192/260 (73.85%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRNLTAGSSDHHFDQS------KASSSFDDSWEEQAFAEDTAGH 61
           EPKRCWMMWE KKK  K+NL   SSDHHF Q+       +SSSFDDSWEEQAFA+D AG 
Sbjct: 2   EPKRCWMMWEKKKK--KKNLITTSSDHHFLQATTTTIKSSSSSFDDSWEEQAFADDAAGR 61

Query: 62  LGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH-QIPPQ 121
           L  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH QIPP 
Sbjct: 62  L--GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHLQIPP- 121

Query: 122 NNPFPFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPI-----TLNKF 181
                     + VCDDNLV   NPNP+SSSS  LS  P+QN+ +SDLTP+     TL+K+
Sbjct: 122 -------TLQQQVCDDNLV--FNPNPKSSSSFCLSTFPSQNLVESDLTPLTTTTATLHKW 181

Query: 182 HQSSELSKKASD----LMDNIDAVCC-KRKRT---DAASTVAFIFRSEVLGLSHGSVEDL 241
           HQSS+LS+K SD    L D   AV C KRKRT     +STVAF FRSEV+GLSH SVEDL
Sbjct: 182 HQSSDLSQKTSDDNDLLKDEEAAVFCNKRKRTSDHSPSSTVAFFFRSEVIGLSHSSVEDL 241

[Close]

BLAST of MS014010 vs. ExPASy TrEMBL
Match: A0A6J1EUY7 (transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC111438197 PE=4 SV=1)

HSP 1 Score: 273.5 bits (698), Expect = 8.6e-70
Identity = 161/252 (63.89%), Postives = 184/252 (73.02%), Query Frame = 0


Query: 2   EPKRCWMMWENKKKTIKRN---LTAGSSDHHFDQSKASSSFDDSWEEQAFAEDTAGHLGG 61
           EPK CWMMWENK +   +N   LT  +SDH    +  +SSFDDSWEEQAFA+D AG L  
Sbjct: 4   EPKPCWMMWENKNQNENKNENRLTT-ASDH---LNNKASSFDDSWEEQAFADDAAGRL-- 63

Query: 62  GGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETH-QIPPQNNP 121
           GGCVWPPR YSCSFCKREFRSAQALGGHMNVHRRDRA LKHESFKPQIETH QIPP+NNP
Sbjct: 64  GGCVWPPRFYSCSFCKREFRSAQALGGHMNVHRRDRAMLKHESFKPQIETHLQIPPKNNP 123

Query: 122 F------PFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQ 181
           F      P  PSS+ VCD+NL    NPNP+SS +S         V++SD      +K+ Q
Sbjct: 124 FTSLIDLPQHPSSQFVCDENLA--FNPNPKSSQNS---------VDESD------HKWRQ 183

Query: 182 SSELSKKASDLMDNIDAVCCKRKRTD--AASTVAFIFRSEVLGLSHGSVEDLDLELRLGG 241
           S +LS K +DL  + DAVCCKRKR+D  + STVAF+ RSEV+GLSH S+EDLDLELRLG 
Sbjct: 184 SLDLSIKTTDLFKD-DAVCCKRKRSDHHSTSTVAFVLRSEVIGLSHNSIEDLDLELRLGD 230

[Close]

BLAST of MS014010 vs. TAIR 10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 1.0e-22
Identity = 80/203 (39.41%), Postives = 102/203 (50.25%), Query Frame = 0


Query: 44  EEQAFAEDTAGHLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFK 103
           EE+AFA     + GGGGC+WPPRSYSCSFC REF+SAQALGGHMNVHRRDRARLK +S  
Sbjct: 32  EERAFA-SAEEYGGGGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQSLS 91

Query: 104 PQIETHQIPPQNNPFPFTPSSETVCDDN---LVGYNNPNPRSSSSSFLSVLPTQNVE--- 163
           P       PP+          + V D     LV      P  +      V     +E   
Sbjct: 92  PSSTDQATPPE------CDRQQQVLDVGSKVLVQEETRKPNGTKREISDVCNNNVLESSM 151

Query: 164 ----------KSDLTPITLNKFHQSSELSKKASDLMDNIDAVCCKRKRTDAASTVAFIFR 223
                     K+DL+   L     S+E   +   L+ N  +   KR +TD +     +  
Sbjct: 152 KRYEHDNGEVKTDLSVGLL-----STEFDPRKKQLI-NGSSSSWKRAKTDVSRFPMML-- 211

Query: 224 SEVLGLS--HGSVEDLDLELRLG 229
             V+G+S  +G  E+LDLELRLG
Sbjct: 212 GLVIGISEINGHHEELDLELRLG 219

[Close]

BLAST of MS014010 vs. TAIR 10
Match: AT2G37740.1 (zinc-finger protein 10 )

HSP 1 Score: 95.1 bits (235), Expect = 8.1e-20
Identity = 50/87 (57.47%), Postives = 61/87 (70.11%), Query Frame = 0


Query: 37  SSFDDSWEEQAFAEDTAGHLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRAR 96
           S+ + SWEE AFAED A      G +WPPRSY+CSFC+REF+SAQALGGHMNVHRRDRAR
Sbjct: 13  SNKESSWEELAFAEDDA-----AGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRRDRAR 72

Query: 97  LKHESFKPQIETHQIPPQNNPFPFTPS 124
           LK      Q +   + P+++  P  PS
Sbjct: 73  LK------QADDQYLFPKSSSSPEYPS 88

[Close]

BLAST of MS014010 vs. TAIR 10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 92.8 bits (229), Expect = 4.0e-19
Identity = 71/172 (41.28%), Postives = 89/172 (51.74%), Query Frame = 0


Query: 60  GCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNP-- 119
           G  WPPRSY+CSFCKREFRSAQALGGHMNVHRRDRARL+ +   P   +   PP  NP  
Sbjct: 39  GFSWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ-SPSSSSTPSPPYPNPNY 98

Query: 120 -FPFTPSSETVCDDNLVGYNNPNPRSSSSSFLSVLPTQNVEKSDLTPITLNKFHQSSELS 179
            +    +S       L  +   +P  SS  + + L      KS  TP    K  +SS L 
Sbjct: 99  SYSTMANSPPPHHSPLTLFPTLSP-PSSPRYRAGLIRSLSPKSKHTPENACKTKKSS-LL 158

Query: 180 KKASDLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLSHGSVEDLDLELRLG 229
            +A +         CK  R D   ++        +GL + S +DLDLELRLG
Sbjct: 159 VEAGEATRFTSKDACKILRNDEIISLEL-----EIGLINESEQDLDLELRLG 202

[Close]

BLAST of MS014010 vs. TAIR 10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein )

HSP 1 Score: 91.7 bits (226), Expect = 8.9e-19
Identity = 40/56 (71.43%), Postives = 48/56 (85.71%), Query Frame = 0


Query: 40 DDSWEEQAFAEDTAGHLGGGGCVWPPRSYSCSFCKREFRSAQALGGHMNVHRRDRA 96
          D+SWE +AF +DT G++   G  WPPRSY+C+FC+REFRSAQALGGHMNVHRRDRA
Sbjct: 20 DESWEVKAFEQDTKGNI--SGTTWPPRSYTCNFCRREFRSAQALGGHMNVHRRDRA 73

[Close]

BLAST of MS014010 vs. TAIR 10
Match: AT2G42410.1 (zinc finger protein 11 )

HSP 1 Score: 82.8 bits (203), Expect = 4.1e-16
Identity = 66/172 (38.37%), Postives = 91/172 (52.91%), Query Frame = 0


Query: 63  WPPRSYSCSFCKREFRSAQALGGHMNVHRRDRARLKHESFKPQIETHQIPPQNNPFP-FT 122
           WPP++Y+CSFC+REFRSAQALGGHMNVHRRDRA+L+ +      E H   P  NP P F+
Sbjct: 44  WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLR-QIPSWLFEPHHHTPIANPNPNFS 103

Query: 123 PSSETVCDDNLVGYNNPNPRSSSSSFLS----VLPTQNVEKSDLTPITLNKFHQSSELSK 182
            SS +      +  +  N RS ++ F S    +L +       +     NK +  S   K
Sbjct: 104 SSSSSSTTTAHLEPSLTNQRSKTTPFPSARFDLLDSTTSYGGLMMDREKNKSNVCSREIK 163

Query: 183 KASDLMDNIDAVCCKRKRTDAASTVAFIFRSEVLGLS-HGSVEDLDLELRLG 229
           K++  +D   +V C+  R D  +          LG+S     + LDLELRLG
Sbjct: 164 KSA--IDACHSVRCEISRGDLMNKKDDQVMGLELGMSLRNPNQVLDLELRLG 212

The following BLAST results are available for this feature:

BLAST of MS014010 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022143921.1	3.5e-134	99.17	transcriptional regulator SUPERMAN-like [Momordica charantia]	[more]
XP_004142197.1	3.0e-77	68.73	probable transcriptional regulator RABBIT EARS [Cucumis sativus] >KGN54274.1 hyp...	[more]
XP_008448173.1	2.6e-76	67.31	PREDICTED: probable transcriptional regulator RABBIT EARS [Cucumis melo] >XP_008...	[more]
XP_038883849.1	1.4e-74	67.32	probable transcriptional regulator RABBIT EARS [Benincasa hispida]	[more]
XP_022931921.1	1.8e-69	63.89	transcriptional regulator SUPERMAN-like [Cucurbita moschata]	[more]

BLAST of MS014010 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LHS9	1.4e-21	39.41	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
O80942	1.1e-18	57.47	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
Q38895	5.6e-18	41.28	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
Q9SLB8	5.8e-15	38.37	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
Q9SR34	9.0e-08	58.70	Transcriptional regulator TAC1 OS=Arabidopsis thaliana OX=3702 GN=TAC1 PE=2 SV=1	[more]

BLAST of MS014010 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CRR7	1.7e-134	99.17	transcriptional regulator SUPERMAN-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A0A0KZM8	1.5e-77	68.73	C2H2-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G296275 P...	[more]
A0A1S3BJY1	1.2e-76	67.31	probable transcriptional regulator RABBIT EARS OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7STW0	1.2e-76	67.31	Putative transcriptional regulator RABBIT EARS OS=Cucumis melo var. makuwa OX=11...	[more]
A0A6J1EUY7	8.6e-70	63.89	transcriptional regulator SUPERMAN-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of MS014010 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06070.1	1.0e-22	39.41	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	8.1e-20	57.47	zinc-finger protein 10	[more]
AT3G23130.1	4.0e-19	41.28	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT4G17810.1	8.9e-19	71.43	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	4.1e-16	38.37	zinc finger protein 11	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 68..90 e-value: 0.006 score: 25.8
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 70..90
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 68..95 score: 11.239817
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 68..92 e-value: 1.1E-6 score: 28.5
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 64..117 e-value: 3.3E-6 score: 28.8
None	No IPR available	PANTHER	PTHR45801:SF68	CHAIN A, NMR STRUCTURE OF THE SINGLE QALGGH ZINC FINGER DOMAIN FROM ARABIDOPSIS THALIANA SUPERMAN PROTEIN	coord: 22..228
None	No IPR available	PANTHER	PTHR45801	OS07G0101800 PROTEIN	coord: 22..228
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	57667	beta-beta-alpha zinc fingers	coord: 65..94

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS014010.1	MS014010.1	mRNA