MS013994 (gene) Bitter gourd (TR) v1

Overview


Name	MS013994
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	fasciclin-like arabinogalactan protein 11
Location	scaffold607: 1506785 .. 1507012 (-)
RNA-Seq Expression	MS013994
Synteny	MS013994

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTGAGCTGGTTCAGTTCCATGTCCTCCCAAATTTCGTTTCCATGTCCCAATTTCATTCCGTCAGCAACCCTCTTCGTACCCAGGCCGGAAACAGCAACGCCCGCCAGTTTCCCCTGAATGTTACCACTTCTGGGTCTCAGGTCAATTTTACCACCAGCGTCGTCGACGCCGTCGTCGCCAACACCATTTACACCGACGGCCAACTTGTCGTTTACCACGTCACCAGC

mRNA sequence

GTTGAGCTGGTTCAGTTCCATGTCCTCCCAAATTTCGTTTCCATGTCCCAATTTCATTCCGTCAGCAACCCTCTTCGTACCCAGGCCGGAAACAGCAACGCCCGCCAGTTTCCCCTGAATGTTACCACTTCTGGGTCTCAGGTCAATTTTACCACCAGCGTCGTCGACGCCGTCGTCGCCAACACCATTTACACCGACGGCCAACTTGTCGTTTACCACGTCACCAGC

Coding sequence (CDS)

GTTGAGCTGGTTCAGTTCCATGTCCTCCCAAATTTCGTTTCCATGTCCCAATTTCATTCCGTCAGCAACCCTCTTCGTACCCAGGCCGGAAACAGCAACGCCCGCCAGTTTCCCCTGAATGTTACCACTTCTGGGTCTCAGGTCAATTTTACCACCAGCGTCGTCGACGCCGTCGTCGCCAACACCATTTACACCGACGGCCAACTTGTCGTTTACCACGTCACCAGC

Protein sequence

VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVANTIYTDGQLVVYHVTS

Homology

[Close]

BLAST of MS013994 vs. NCBI nr
Match: XP_022151508.1 (fasciclin-like arabinogalactan protein 11 [Momordica charantia])

HSP 1 Score: 142.9 bits (359), Expect = 1.1e-30
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA
Sbjct: 100 VQLVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 159

Query: 61  NTIYTDGQLVVYHVTS 77
           NT YTDGQLVVYHVTS
Sbjct: 160 NTNYTDGQLVVYHVTS 175

[Close]

BLAST of MS013994 vs. NCBI nr
Match: XP_022979163.1 (fasciclin-like arabinogalactan protein 11 [Cucurbita maxima])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVA
Sbjct: 134 VQLVQFHVLPNFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVA 193

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 194 NTIYTDGQLAVYQV 207

[Close]

BLAST of MS013994 vs. NCBI nr
Match: XP_023543377.1 (fasciclin-like arabinogalactan protein 11 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVA
Sbjct: 102 VQLVQFHVLPNFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVA 161

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 162 NTIYTDGQLAVYQV 175

[Close]

BLAST of MS013994 vs. NCBI nr
Match: XP_022925941.1 (fasciclin-like arabinogalactan protein 11 [Cucurbita moschata])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVA
Sbjct: 102 VQLVQFHVLPNFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVA 161

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 162 NTIYTDGQLAVYQV 175

[Close]

BLAST of MS013994 vs. NCBI nr
Match: KAG6604433.1 (Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126.3 bits (316), Expect = 1.1e-25
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVA
Sbjct: 102 VQLVQFHVLPNFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVA 161

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 162 NTIYTDGQLAVYQV 175

[Close]

BLAST of MS013994 vs. ExPASy Swiss-Prot
Match: Q8LEJ6 (Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2)

HSP 1 Score: 95.5 bits (236), Expect = 2.7e-19
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLP  ++M QF +VSNPLRTQAG+    +FPLN+T+SG+QVN TT VV A VA
Sbjct: 102 VQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVA 161

Query: 61  NTIYTDGQLVVYHV 75
           N++Y+D QL VY V
Sbjct: 162 NSVYSDKQLAVYQV 175

[Close]

BLAST of MS013994 vs. ExPASy Swiss-Prot
Match: Q8LEE9 (Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA12 PE=2 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 6.7e-18
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           VEL+QFHV+P++VS S F ++SNPLRTQAG+S    FPLNVTTSG+ VN T+ V +  V+
Sbjct: 104 VELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVS 163

Query: 61  NTIYTDGQLVVYHV 75
             +Y+DGQL VY V
Sbjct: 164 GNVYSDGQLAVYQV 177

[Close]

BLAST of MS013994 vs. ExPASy Swiss-Prot
Match: Q9ZWA8 (Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9 PE=2 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.0e-05
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+L+ +HV P + SM    SVSNP+RTQA   +   + LN T   +Q+N +T  V+  ++
Sbjct: 104 VKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRIS 163

Query: 61  NTIYTDGQLVVYHV 75
           N++     L VY V
Sbjct: 164 NSLRQQRPLAVYVV 177

[Close]

BLAST of MS013994 vs. ExPASy Swiss-Prot
Match: Q9FFH6 (Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA13 PE=1 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 1.7e-05
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVV 60
           V+L+ +HV P F ++    SVSNP+RTQA G      + LN T  G+QVN +T VV+  +
Sbjct: 101 VKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRL 160

Query: 61  ANTIYTDGQLVVYHV 75
           + ++  +  L VY V
Sbjct: 161 STSLRQERPLAVYVV 175

[Close]

BLAST of MS013994 vs. ExPASy Swiss-Prot
Match: Q9SIL7 (Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6 PE=2 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 1.1e-04
Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAV 60
           ++L+ +H++P + S+S     SNP+RTQA   +   F LN T     +QVN +T VV+  
Sbjct: 103 IQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETR 162

Query: 61  VANTIYTDGQLVVYHVTS 77
           + N +     L VY V S
Sbjct: 163 INNALRQQFPLAVYVVDS 180

[Close]

BLAST of MS013994 vs. ExPASy TrEMBL
Match: A0A6J1DCD1 (fasciclin-like arabinogalactan protein 11 OS=Momordica charantia OX=3673 GN=LOC111019433 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 5.5e-31
Identity = 74/76 (97.37%), Postives = 75/76 (98.68%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA
Sbjct: 100 VQLVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 159

Query: 61  NTIYTDGQLVVYHVTS 77
           NT YTDGQLVVYHVTS
Sbjct: 160 NTNYTDGQLVVYHVTS 175

[Close]

BLAST of MS013994 vs. ExPASy TrEMBL
Match: A0A6J1IVC0 (fasciclin-like arabinogalactan protein 11 OS=Cucurbita maxima OX=3661 GN=LOC111478882 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-26
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVA
Sbjct: 134 VQLVQFHVLPNFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVA 193

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 194 NTIYTDGQLAVYQV 207

[Close]

BLAST of MS013994 vs. ExPASy TrEMBL
Match: A0A6J1EDI6 (fasciclin-like arabinogalactan protein 11 OS=Cucurbita moschata OX=3662 GN=LOC111433203 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 5.3e-26
Identity = 65/74 (87.84%), Postives = 68/74 (91.89%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLPNF+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVA
Sbjct: 102 VQLVQFHVLPNFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVA 161

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 162 NTIYTDGQLAVYQV 175

[Close]

BLAST of MS013994 vs. ExPASy TrEMBL
Match: A0A0A0KH46 (FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G445040 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.3e-24
Identity = 62/74 (83.78%), Postives = 67/74 (90.54%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQ+HV+P F+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT VVDAVVA
Sbjct: 103 VQLVQYHVVPTFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVVDAVVA 162

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 163 NTIYTDGQLAVYQV 176

[Close]

BLAST of MS013994 vs. ExPASy TrEMBL
Match: A0A5A7TVT2 (Fasciclin-like arabinogalactan protein 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00630 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 8.5e-24
Identity = 61/74 (82.43%), Postives = 66/74 (89.19%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQ+HV+P F+SMSQF +VSNPLRTQAGNSNA QFPLNVTTSGSQVN TT V DAVVA
Sbjct: 109 VQLVQYHVVPTFISMSQFQTVSNPLRTQAGNSNAGQFPLNVTTSGSQVNLTTGVDDAVVA 168

Query: 61  NTIYTDGQLVVYHV 75
           NTIYTDGQL VY V
Sbjct: 169 NTIYTDGQLAVYQV 182

[Close]

BLAST of MS013994 vs. TAIR 10
Match: AT5G03170.1 (FASCICLIN-like arabinogalactan-protein 11 )

HSP 1 Score: 95.5 bits (236), Expect = 1.9e-20
Identity = 47/74 (63.51%), Postives = 59/74 (79.73%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+LVQFHVLP  ++M QF +VSNPLRTQAG+    +FPLN+T+SG+QVN TT VV A VA
Sbjct: 102 VQLVQFHVLPTLITMPQFQTVSNPLRTQAGDGQNGKFPLNITSSGNQVNITTGVVSATVA 161

Query: 61  NTIYTDGQLVVYHV 75
           N++Y+D QL VY V
Sbjct: 162 NSVYSDKQLAVYQV 175

[Close]

BLAST of MS013994 vs. TAIR 10
Match: AT5G60490.1 (FASCICLIN-like arabinogalactan-protein 12 )

HSP 1 Score: 90.9 bits (224), Expect = 4.8e-19
Identity = 44/74 (59.46%), Postives = 57/74 (77.03%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           VEL+QFHV+P++VS S F ++SNPLRTQAG+S    FPLNVTTSG+ VN T+ V +  V+
Sbjct: 104 VELIQFHVIPSYVSSSNFQTISNPLRTQAGDSADGHFPLNVTTSGNTVNITSGVTNTTVS 163

Query: 61  NTIYTDGQLVVYHV 75
             +Y+DGQL VY V
Sbjct: 164 GNVYSDGQLAVYQV 177

[Close]

BLAST of MS013994 vs. TAIR 10
Match: AT1G03870.1 (FASCICLIN-like arabinoogalactan 9 )

HSP 1 Score: 50.4 bits (119), Expect = 7.2e-07
Identity = 28/74 (37.84%), Postives = 43/74 (58.11%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVTTSGSQVNFTTSVVDAVVA 60
           V+L+ +HV P + SM    SVSNP+RTQA   +   + LN T   +Q+N +T  V+  ++
Sbjct: 104 VKLILYHVSPKYYSMDDLLSVSNPVRTQASGRDNGVYGLNFTGQTNQINVSTGYVETRIS 163

Query: 61  NTIYTDGQLVVYHV 75
           N++     L VY V
Sbjct: 164 NSLRQQRPLAVYVV 177

[Close]

BLAST of MS013994 vs. TAIR 10
Match: AT5G44130.1 (FASCICLIN-like arabinogalactan protein 13 precursor )

HSP 1 Score: 49.7 bits (117), Expect = 1.2e-06
Identity = 30/75 (40.00%), Postives = 45/75 (60.00%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQA-GNSNARQFPLNVTTSGSQVNFTTSVVDAVV 60
           V+L+ +HV P F ++    SVSNP+RTQA G      + LN T  G+QVN +T VV+  +
Sbjct: 101 VKLILYHVSPKFYTLEDLLSVSNPVRTQASGRDVGGVYGLNFTGQGNQVNVSTGVVETRL 160

Query: 61  ANTIYTDGQLVVYHV 75
           + ++  +  L VY V
Sbjct: 161 STSLRQERPLAVYVV 175

[Close]

BLAST of MS013994 vs. TAIR 10
Match: AT2G20520.1 (FASCICLIN-like arabinogalactan 6 )

HSP 1 Score: 47.0 bits (110), Expect = 7.9e-06
Identity = 28/78 (35.90%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 1   VELVQFHVLPNFVSMSQFHSVSNPLRTQAGNSNARQFPLNVT--TSGSQVNFTTSVVDAV 60
           ++L+ +H++P + S+S     SNP+RTQA   +   F LN T     +QVN +T VV+  
Sbjct: 103 IQLMLYHIIPKYYSLSDLLLASNPVRTQATGQDGGVFGLNFTGQAQSNQVNVSTGVVETR 162

Query: 61  VANTIYTDGQLVVYHVTS 77
           + N +     L VY V S
Sbjct: 163 INNALRQQFPLAVYVVDS 180

The following BLAST results are available for this feature:

BLAST of MS013994 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151508.1	1.1e-30	97.37	fasciclin-like arabinogalactan protein 11 [Momordica charantia]	[more]
XP_022979163.1	1.1e-25	87.84	fasciclin-like arabinogalactan protein 11 [Cucurbita maxima]	[more]
XP_023543377.1	1.1e-25	87.84	fasciclin-like arabinogalactan protein 11 [Cucurbita pepo subsp. pepo]	[more]
XP_022925941.1	1.1e-25	87.84	fasciclin-like arabinogalactan protein 11 [Cucurbita moschata]	[more]
KAG6604433.1	1.1e-25	87.84	Fasciclin-like arabinogalactan protein 11, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of MS013994 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEJ6	2.7e-19	63.51	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q8LEE9	6.7e-18	59.46	Fasciclin-like arabinogalactan protein 12 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9ZWA8	1.0e-05	37.84	Fasciclin-like arabinogalactan protein 9 OS=Arabidopsis thaliana OX=3702 GN=FLA9...	[more]
Q9FFH6	1.7e-05	40.00	Fasciclin-like arabinogalactan protein 13 OS=Arabidopsis thaliana OX=3702 GN=FLA...	[more]
Q9SIL7	1.1e-04	35.90	Fasciclin-like arabinogalactan protein 6 OS=Arabidopsis thaliana OX=3702 GN=FLA6...	[more]

BLAST of MS013994 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DCD1	5.5e-31	97.37	fasciclin-like arabinogalactan protein 11 OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A6J1IVC0	5.3e-26	87.84	fasciclin-like arabinogalactan protein 11 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]
A0A6J1EDI6	5.3e-26	87.84	fasciclin-like arabinogalactan protein 11 OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]
A0A0A0KH46	1.3e-24	83.78	FAS1 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G445040 PE=3 S...	[more]
A0A5A7TVT2	8.5e-24	82.43	Fasciclin-like arabinogalactan protein 11 OS=Cucumis melo var. makuwa OX=1194695...	[more]

BLAST of MS013994 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03170.1	1.9e-20	63.51	FASCICLIN-like arabinogalactan-protein 11	[more]
AT5G60490.1	4.8e-19	59.46	FASCICLIN-like arabinogalactan-protein 12	[more]
AT1G03870.1	7.2e-07	37.84	FASCICLIN-like arabinoogalactan 9	[more]
AT5G44130.1	1.2e-06	40.00	FASCICLIN-like arabinogalactan protein 13 precursor	[more]
AT2G20520.1	7.9e-06	35.90	FASCICLIN-like arabinogalactan 6	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR045003	Fasciclin-like arabinogalactan protein, group A	PANTHER	PTHR32077	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN	coord: 1..75
None	No IPR available	PANTHER	PTHR32077:SF65	FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 11	coord: 1..75
IPR036378	FAS1 domain superfamily	SUPERFAMILY	82153	FAS1 domain	coord: 2..75

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013994.1	MS013994.1	mRNA