MS013982 (gene) Bitter gourd (TR) v1

Overview


Name	MS013982
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich).
Location	scaffold607: 1399324 .. 1401016 (-)
RNA-Seq Expression	MS013982
Synteny	MS013982

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGCACCTTCTTCCAAGGTATGTATGTATATTATTGCCGTATTCATTGTCGATTGCTATCTGATTTCTTCACTTCACTTCGATCGTTGATTCTTTCACCTTTTGTTTCGTTTGTATTGTTATTGTTCGTTTTTCTGTTTCAGTGCCCCTCCATGGATTGCGATTCTTCTTGTTCTTTTACTCTTTTCTTTAAATGGGTTGCGATTTAGTAATAAATAACTTATGGATTGAAGCAAATCGGTGATGTTTCTCAATTGGGATCGTGTATTGACTCATGCTGAAATGCATTGCTTCTCCATCTGCCCCATTAAGTGAAAAGTTGAAGCAATAGAACACGTTAAATTTTGTGTTCATTGAATTAATTATTATGAATCTCTGGAATTTATATCTGTGATACTTTTTCAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGGTTTGCATATCATTTTAGTTCCTTTGATAGTTTTGATCATCTCCACTTTGAGGTTCCCACCTGAAAATTGGATGTTCTAACTCTTGATTTCATAAGGTGTTGAAACTGATGTGTTGAACATGAACTCAGACAATGGTCTGATTTCTTAAAGGAAGAAAAAACAGCCGAGAACACTGAAGGGTTATGGTTTTGAAGTTAATTCTATTGTATAATATGTTTCAAGTGTTTTTTTATTCAAAAATTTGGATTTGTAACAAAAAATCTTGAGAATTTTGGAAAGTGTTTTTTGTTACCTCGCACTTCAAAGACAATATATAAATAGGTTTTCAGTGAAATCATCTTAAAGAACAATTTCAGGATACAATCCACAACCAAGGCTTGATGCTTGCAATATCCGGTGACGGTGAACTGGTTTACGATCGCTTACACATGAGCTTTGTTCTAAAAATTGCTCGAACATGTTCTCTTCTAAAGATATCCATCTCATTAAGCAAGACCTTGAGATCTAAATACTGTTGTACGAAATCGTCCTTATTGATATCTTTCTATCTCTGCAGATGCTGCTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGGTAAGTATATTCAACACATCATTTATAGTTTTATATCTTTGTCTAATTGCAGATTCAACCGATTTCATTTCTTTTTTCTTTTCCTTTTTATTCATCATATCATTTTCTTAGGGTAAGTTCACGGTTTAAAGCACTAAACATGGTAGTACTATTCTATTTGAGAAGTAATTGGAACTCTTGCATATGTTCAAACAATGGTAACATGTAAAAGAATAGACATTGAAATATAATTGAGATTCTTTATCGCCCCCTAATGATCTGCTTTGACTTGTTTTGGTGATATCTCTCAGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATAAAA

mRNA sequence

ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGCACCTTCTTCCAAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGATGCTGCTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATAAAA

Coding sequence (CDS)

ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGCACCTTCTTCCAAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGATGCTGCTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATAAAA

Protein sequence

MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQGIK

Homology

[Close]

BLAST of MS013982 vs. NCBI nr
Match: XP_022151567.1 (uncharacterized protein LOC111019480 [Momordica charantia])

HSP 1 Score: 283.9 bits (725), Expect = 8.3e-73
Identity = 148/151 (98.01%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSV 60
           MEGKKQLGSSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSV
Sbjct: 1   MEGKKQLGSSSSLTIDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSV 60

Query: 61  NEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYSQSQ 120
           NEPWIPNTEAKD AANHRQKESQEMKNKDLSS YQEQRAQPCHLSSSIYYGGQDVYSQSQ
Sbjct: 61  NEPWIPNTEAKDDAANHRQKESQEMKNKDLSSIYQEQRAQPCHLSSSIYYGGQDVYSQSQ 120

Query: 121 NSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
           NSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
Sbjct: 121 NSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 151

[Close]

BLAST of MS013982 vs. NCBI nr
Match: XP_038882075.1 (uncharacterized protein LOC120073353 isoform X1 [Benincasa hispida])

HSP 1 Score: 244.2 bits (622), Expect = 7.3e-61
Identity = 128/154 (83.12%), Postives = 137/154 (88.96%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLG +SLLSQ KEGER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDSLLSQTKEGER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           DSVNEPWIPN EA+D  ANH QKES EMKNKD+SS YQ+QRAQPCHLSSSIYYGGQDVY+
Sbjct: 61  DSVNEPWIPNAEAQDDTANHTQKESPEMKNKDMSSIYQDQRAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+NS VNS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSYNSEVNSAYKKEGGEDDSGSASRGNWWQG 154

[Close]

BLAST of MS013982 vs. NCBI nr
Match: XP_008448572.1 (PREDICTED: uncharacterized protein LOC103490707 isoform X1 [Cucumis melo] >KAA0045121.1 uncharacterized protein E6C27_scaffold30G001180 [Cucumis melo var. makuwa] >TYK23616.1 uncharacterized protein E5676_scaffold500G001300 [Cucumis melo var. makuwa])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSQTKERER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           +SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q AQPCHLSSSIYYGGQDVY+
Sbjct: 61  NSVNEPWNPNAEAQDDNANHTQKESQEMKNKDMSSIYQDQSAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQG 154

[Close]

BLAST of MS013982 vs. NCBI nr
Match: XP_008448581.1 (PREDICTED: uncharacterized protein LOC103490707 isoform X2 [Cucumis melo])

HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSQTKERER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           +SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q AQPCHLSSSIYYGGQDVY+
Sbjct: 61  NSVNEPWNPNAEAQDDNANHTQKESQEMKNKDMSSIYQDQSAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQG 154

[Close]

BLAST of MS013982 vs. NCBI nr
Match: XP_038882076.1 (uncharacterized protein LOC120073353 isoform X2 [Benincasa hispida])

HSP 1 Score: 233.8 bits (595), Expect = 9.9e-58
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLG +SLLSQ KEGER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSKETSYSSTTGIFGSIFAPSSKVLGRDSLLSQTKEGER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           DSVNEPWIPN EA+D  ANH QKES EMKNKD+SS YQ+QRAQPCHLSSSIYYGGQDVY+
Sbjct: 61  DSVNEPWIPNAEAQDDTANHTQKESPEMKNKDMSSIYQDQRAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+    NS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSY----NSEYKKEGGEDDSGSASRGNWWQG 150

[Close]

BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A6J1DDV5 (uncharacterized protein LOC111019480 OS=Momordica charantia OX=3673 GN=LOC111019480 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.0e-73
Identity = 148/151 (98.01%), Postives = 148/151 (98.01%), Query Frame = 0


Query: 1   MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSV 60
           MEGKKQLGSSSSLT DLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSV
Sbjct: 1   MEGKKQLGSSSSLTIDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSV 60

Query: 61  NEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYSQSQ 120
           NEPWIPNTEAKD AANHRQKESQEMKNKDLSS YQEQRAQPCHLSSSIYYGGQDVYSQSQ
Sbjct: 61  NEPWIPNTEAKDDAANHRQKESQEMKNKDLSSIYQEQRAQPCHLSSSIYYGGQDVYSQSQ 120

Query: 121 NSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
           NSHNSGVNSVFKKDGGEDDSGSASRGNWWQG
Sbjct: 121 NSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 151

[Close]

BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A5D3DIY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001300 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSQTKERER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           +SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q AQPCHLSSSIYYGGQDVY+
Sbjct: 61  NSVNEPWNPNAEAQDDNANHTQKESQEMKNKDMSSIYQDQSAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQG 154

[Close]

BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A1S3BK03 (uncharacterized protein LOC103490707 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490707 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSQTKERER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           +SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q AQPCHLSSSIYYGGQDVY+
Sbjct: 61  NSVNEPWNPNAEAQDDNANHTQKESQEMKNKDMSSIYQDQSAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQG 154

[Close]

BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A1S3BKM1 (uncharacterized protein LOC103490707 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490707 PE=4 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59
Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLSQ KE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSQTKERER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           +SVNEPW PN EA+D  ANH QKESQEMKNKD+SS YQ+Q AQPCHLSSSIYYGGQDVY+
Sbjct: 61  NSVNEPWNPNAEAQDDNANHTQKESQEMKNKDMSSIYQDQSAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQG 154

[Close]

BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A0A0L143 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303110 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 1.8e-57
Identity = 123/154 (79.87%), Postives = 132/154 (85.71%), Query Frame = 0


Query: 1   MEGKKQLG---SSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGER 60
           MEGKK +G   SSSSLT DLFGS ETSYSSTTGIFGSIFAPSSKVLG ESLLS  KE ER
Sbjct: 1   MEGKKHVGLGSSSSSLTTDLFGSNETSYSSTTGIFGSIFAPSSKVLGRESLLSHTKERER 60

Query: 61  DSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYS 120
           +SVNEPW PN  A+D  ANH QKESQE KNKD+SS YQ+QRAQPCHLSSSIYYGGQDVY+
Sbjct: 61  NSVNEPWNPNAGAQDDNANHTQKESQETKNKDMSSIYQDQRAQPCHLSSSIYYGGQDVYT 120

Query: 121 QSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
             QNS+NSG NS +KK+GGEDDSGSASRGNWWQG
Sbjct: 121 HPQNSYNSGANSAYKKEGGEDDSGSASRGNWWQG 154

[Close]

BLAST of MS013982 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 122.1 bits (305), Expect = 3.9e-28
Identity = 85/158 (53.80%), Postives = 99/158 (62.66%), Query Frame = 0


Query: 1   MEGKKQLG------SSSSLTNDLFGSKET-SYSSTTGIFGSIFAPSSKVLGGESLLSQIK 60
           MEG+K+        SSSSLT++LFGS+E  S  S++GI GSIF P SKVLG ES+  +  
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query: 61  EGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQ 120
            G        W   T +K      R +E QE      S + Q+QR QPCHLSSSIYYGG 
Sbjct: 61  TG------GCWNEKT-SKTGGNVDRNREQQENHG---SGYQQDQRVQPCHLSSSIYYGGP 120

Query: 121 DVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
           DVY Q QNS +   NS  KKDGGEDDSGSASRGNWWQG
Sbjct: 121 DVYFQPQNSTS---NSTNKKDGGEDDSGSASRGNWWQG 145

[Close]

BLAST of MS013982 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). )

HSP 1 Score: 84.7 bits (208), Expect = 6.9e-17
Identity = 63/129 (48.84%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 1   MEGKKQLG------SSSSLTNDLFGSKET-SYSSTTGIFGSIFAPSSKVLGGESLLSQIK 60
           MEG+K+        SSSSLT++LFGS+E  S  S++GI GSIF P SKVLG ES+  +  
Sbjct: 1   MEGRKKKASSSSPCSSSSLTSELFGSRENPSSPSSSGILGSIFPPPSKVLGRESVRQETV 60

Query: 61  EGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQ 120
            G        W   T +K      R +E QE      S + Q+QR QPCHLSSSIYYGG 
Sbjct: 61  TG------GCWNEKT-SKTGGNVDRNREQQENHG---SGYQQDQRVQPCHLSSSIYYGGP 119

Query: 121 DVYSQSQNS 123
           DVY Q QNS
Sbjct: 121 DVYFQPQNS 119

[Close]

BLAST of MS013982 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 79.3 bits (194), Expect = 2.9e-15
Identity = 67/159 (42.14%), Postives = 87/159 (54.72%), Query Frame = 0


Query: 1   MEGKKQL----GSSSSLTNDLFGSKET-SY-SSTTGIFGSIFAPSSKVLGGESLLSQIKE 60
           M+ KK +     SSSS  + +FG + + SY SSTTG+F SIF P S V  G +L S+   
Sbjct: 1   MDKKKSVSGSSSSSSSSLDHIFGPRVSHSYSSSTTGLFKSIFPPPSAVTQG-NLTSR--- 60

Query: 61  GERDSVNEPWIPNTEAKDAAANHR--QKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGG 120
                       N  AK    N     +  +  KNK+  S+  E+   PC+LSSSIYYGG
Sbjct: 61  ------------NGAAKYQPTNFETPNERGERSKNKERKSYQSEETQPPCNLSSSIYYGG 120

Query: 121 QDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
           QD YS S  + ++     +KKDG E DS SASRGNWW+G
Sbjct: 121 QDNYSSSTTNPDA-----YKKDGEEGDSESASRGNWWEG 138

[Close]

BLAST of MS013982 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 75.5 bits (184), Expect = 4.2e-14
Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 0


Query: 2   EGKKQLGSSSSLTNDL------FGSK--ETSYSSTTGIFGSIFAPSSKVLGGESLLSQIK 61
           + KK++ S+SS ++ L      FG +   +S SS TG+F SIF P S     + L  Q+ 
Sbjct: 5   KNKKKIVSASSSSSSLSSFDHIFGPRVSSSSSSSATGLFKSIFPPPS----ADQLGRQVD 64

Query: 62  EGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQ 121
              +    +   PN  AK   +N ++K+          S+Y E+   PCHLSSS+YYGGQ
Sbjct: 65  FASQGGHVKYQSPN--AKGERSNKKEKK----------SYYNEETEPPCHLSSSLYYGGQ 124

Query: 122 DVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQG 152
           + YS    S  +  +  +KKDG E DS  ASRGNWW+G
Sbjct: 125 ETYS----STTTTTHDTYKKDGEEGDSKRASRGNWWEG 142

[Close]

BLAST of MS013982 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12
Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 0


Query: 1   MEGKKQLGS----SSSLTNDLFGSKETS-YSSTTGIFGSIFAPSSKVLGGESLLSQIKEG 60
           MEGK ++GS    SSS T +LFGSK+ S  SS++GIF ++F   S            K  
Sbjct: 1   MEGKGRVGSSSSTSSSFTAELFGSKDPSPPSSSSGIFSTMFPHPS------------KGS 60

Query: 61  ERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDV 120
            RD  N                 +  SQ  + + L++  QE R +PCHLSSS+YYGGQDV
Sbjct: 61  ARDGSNS----------------KHGSQAQRRESLNA--QEDRVEPCHLSSSLYYGGQDV 120

Query: 121 YSQSQNSHNSGVNSVFKKDGGEDDSG-----SASRGNWWQG 152
           Y++S  +         ++  GEDD+        SRGNWWQG
Sbjct: 121 YARSTTNQTYPPVKNDRRRSGEDDANGQNPQDVSRGNWWQG 131

The following BLAST results are available for this feature:

BLAST of MS013982 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151567.1	8.3e-73	98.01	uncharacterized protein LOC111019480 [Momordica charantia]	[more]
XP_038882075.1	7.3e-61	83.12	uncharacterized protein LOC120073353 isoform X1 [Benincasa hispida]	[more]
XP_008448572.1	1.5e-58	81.17	PREDICTED: uncharacterized protein LOC103490707 isoform X1 [Cucumis melo] >KAA00...	[more]
XP_008448581.1	1.5e-58	81.17	PREDICTED: uncharacterized protein LOC103490707 isoform X2 [Cucumis melo]	[more]
XP_038882076.1	9.9e-58	81.17	uncharacterized protein LOC120073353 isoform X2 [Benincasa hispida]	[more]

BLAST of MS013982 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS013982 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDV5	4.0e-73	98.01	uncharacterized protein LOC111019480 OS=Momordica charantia OX=3673 GN=LOC111019...	[more]
A0A5D3DIY4	7.4e-59	81.17	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3BK03	7.4e-59	81.17	uncharacterized protein LOC103490707 isoform X2 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A1S3BKM1	7.4e-59	81.17	uncharacterized protein LOC103490707 isoform X1 OS=Cucumis melo OX=3656 GN=LOC10...	[more]
A0A0A0L143	1.8e-57	79.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303110 PE=4 SV=1	[more]

BLAST of MS013982 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G02020.1	3.9e-28	53.80	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT5G02020.2	6.9e-17	48.84	Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine ric...	[more]
AT2G39855.2	2.9e-15	42.14	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G55646.1	4.2e-14	37.97	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G59080.1	1.3e-12	37.89	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..98
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 73..87
None	No IPR available	PANTHER	PTHR33738	EMB\|CAB82975.1	coord: 1..151
None	No IPR available	PANTHER	PTHR33738:SF1	PLANT/T7H20-70 PROTEIN	coord: 1..151

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013982.1	MS013982.1	mRNA