
MS013982 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGCACCTTCTTCCAAGGTATGTATGTATATTATTGCCGTATTCATTGTCGATTGCTATCTGATTTCTTCACTTCACTTCGATCGTTGATTCTTTCACCTTTTGTTTCGTTTGTATTGTTATTGTTCGTTTTTCTGTTTCAGTGCCCCTCCATGGATTGCGATTCTTCTTGTTCTTTTACTCTTTTCTTTAAATGGGTTGCGATTTAGTAATAAATAACTTATGGATTGAAGCAAATCGGTGATGTTTCTCAATTGGGATCGTGTATTGACTCATGCTGAAATGCATTGCTTCTCCATCTGCCCCATTAAGTGAAAAGTTGAAGCAATAGAACACGTTAAATTTTGTGTTCATTGAATTAATTATTATGAATCTCTGGAATTTATATCTGTGATACTTTTTCAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGGTTTGCATATCATTTTAGTTCCTTTGATAGTTTTGATCATCTCCACTTTGAGGTTCCCACCTGAAAATTGGATGTTCTAACTCTTGATTTCATAAGGTGTTGAAACTGATGTGTTGAACATGAACTCAGACAATGGTCTGATTTCTTAAAGGAAGAAAAAACAGCCGAGAACACTGAAGGGTTATGGTTTTGAAGTTAATTCTATTGTATAATATGTTTCAAGTGTTTTTTTATTCAAAAATTTGGATTTGTAACAAAAAATCTTGAGAATTTTGGAAAGTGTTTTTTGTTACCTCGCACTTCAAAGACAATATATAAATAGGTTTTCAGTGAAATCATCTTAAAGAACAATTTCAGGATACAATCCACAACCAAGGCTTGATGCTTGCAATATCCGGTGACGGTGAACTGGTTTACGATCGCTTACACATGAGCTTTGTTCTAAAAATTGCTCGAACATGTTCTCTTCTAAAGATATCCATCTCATTAAGCAAGACCTTGAGATCTAAATACTGTTGTACGAAATCGTCCTTATTGATATCTTTCTATCTCTGCAGATGCTGCTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGGTAAGTATATTCAACACATCATTTATAGTTTTATATCTTTGTCTAATTGCAGATTCAACCGATTTCATTTCTTTTTTCTTTTCCTTTTTATTCATCATATCATTTTCTTAGGGTAAGTTCACGGTTTAAAGCACTAAACATGGTAGTACTATTCTATTTGAGAAGTAATTGGAACTCTTGCATATGTTCAAACAATGGTAACATGTAAAAGAATAGACATTGAAATATAATTGAGATTCTTTATCGCCCCCTAATGATCTGCTTTGACTTGTTTTGGTGATATCTCTCAGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATAAAA ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGCACCTTCTTCCAAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGATGCTGCTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATAAAA ATGGAAGGAAAAAAGCAACTGGGTTCCTCTTCTTCTCTCACCAATGACCTGTTTGGCTCCAAAGAAACTTCCTACTCCTCAACCACTGGAATTTTCGGCTCTATATTTGCACCTTCTTCCAAGGTGTTAGGGGGAGAGTCTCTGCTCTCTCAGATCAAAGAGGGAGAGAGGGATTCTGTAAATGAGCCATGGATCCCCAACACTGAAGCTAAAGATGCTGCTGCTAATCATAGACAAAAGGAGAGTCAGGAGATGAAGAATAAAGATCTGAGTTCCTTTTATCAGGAACAAAGAGCACAACCATGTCATCTTAGCTCATCAATCTATTATGGTGGCCAAGATGTTTATTCTCAGTCTCAGAATTCCCATAATTCCGGGGTGAACTCGGTGTTCAAGAAGGATGGGGGAGAAGATGATTCTGGGAGTGCTTCAAGAGGAAATTGGTGGCAAGGTATAAAA MEGKKQLGSSSSLTNDLFGSKETSYSSTTGIFGSIFAPSSKVLGGESLLSQIKEGERDSVNEPWIPNTEAKDAAANHRQKESQEMKNKDLSSFYQEQRAQPCHLSSSIYYGGQDVYSQSQNSHNSGVNSVFKKDGGEDDSGSASRGNWWQGIK Homology
BLAST of MS013982 vs. NCBI nr
Match: XP_022151567.1 (uncharacterized protein LOC111019480 [Momordica charantia]) HSP 1 Score: 283.9 bits (725), Expect = 8.3e-73 Identity = 148/151 (98.01%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of MS013982 vs. NCBI nr
Match: XP_038882075.1 (uncharacterized protein LOC120073353 isoform X1 [Benincasa hispida]) HSP 1 Score: 244.2 bits (622), Expect = 7.3e-61 Identity = 128/154 (83.12%), Postives = 137/154 (88.96%), Query Frame = 0
BLAST of MS013982 vs. NCBI nr
Match: XP_008448572.1 (PREDICTED: uncharacterized protein LOC103490707 isoform X1 [Cucumis melo] >KAA0045121.1 uncharacterized protein E6C27_scaffold30G001180 [Cucumis melo var. makuwa] >TYK23616.1 uncharacterized protein E5676_scaffold500G001300 [Cucumis melo var. makuwa]) HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58 Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of MS013982 vs. NCBI nr
Match: XP_008448581.1 (PREDICTED: uncharacterized protein LOC103490707 isoform X2 [Cucumis melo]) HSP 1 Score: 236.5 bits (602), Expect = 1.5e-58 Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of MS013982 vs. NCBI nr
Match: XP_038882076.1 (uncharacterized protein LOC120073353 isoform X2 [Benincasa hispida]) HSP 1 Score: 233.8 bits (595), Expect = 9.9e-58 Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A6J1DDV5 (uncharacterized protein LOC111019480 OS=Momordica charantia OX=3673 GN=LOC111019480 PE=4 SV=1) HSP 1 Score: 283.9 bits (725), Expect = 4.0e-73 Identity = 148/151 (98.01%), Postives = 148/151 (98.01%), Query Frame = 0
BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A5D3DIY4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold500G001300 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59 Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A1S3BK03 (uncharacterized protein LOC103490707 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490707 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59 Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A1S3BKM1 (uncharacterized protein LOC103490707 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490707 PE=4 SV=1) HSP 1 Score: 236.5 bits (602), Expect = 7.4e-59 Identity = 125/154 (81.17%), Postives = 134/154 (87.01%), Query Frame = 0
BLAST of MS013982 vs. ExPASy TrEMBL
Match: A0A0A0L143 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G303110 PE=4 SV=1) HSP 1 Score: 231.9 bits (590), Expect = 1.8e-57 Identity = 123/154 (79.87%), Postives = 132/154 (85.71%), Query Frame = 0
BLAST of MS013982 vs. TAIR 10
Match: AT5G02020.1 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). ) HSP 1 Score: 122.1 bits (305), Expect = 3.9e-28 Identity = 85/158 (53.80%), Postives = 99/158 (62.66%), Query Frame = 0
BLAST of MS013982 vs. TAIR 10
Match: AT5G02020.2 (Encodes a protein involved in salt tolerance, names SIS (Salt Induced Serine rich). ) HSP 1 Score: 84.7 bits (208), Expect = 6.9e-17 Identity = 63/129 (48.84%), Postives = 76/129 (58.91%), Query Frame = 0
BLAST of MS013982 vs. TAIR 10
Match: AT2G39855.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G55646.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 79.3 bits (194), Expect = 2.9e-15 Identity = 67/159 (42.14%), Postives = 87/159 (54.72%), Query Frame = 0
BLAST of MS013982 vs. TAIR 10
Match: AT3G55646.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G39855.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 75.5 bits (184), Expect = 4.2e-14 Identity = 60/158 (37.97%), Postives = 85/158 (53.80%), Query Frame = 0
BLAST of MS013982 vs. TAIR 10
Match: AT5G59080.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: chloroplast; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G46880.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 70.5 bits (171), Expect = 1.3e-12 Identity = 61/161 (37.89%), Postives = 82/161 (50.93%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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