MS013960 (gene) Bitter gourd (TR) v1

Overview
NameMS013960
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
Descriptiontranscription termination/antitermination protein NusG
Locationscaffold607: 1256406 .. 1258349 (-)
RNA-Seq ExpressionMS013960
SyntenyMS013960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTTTGGGCTTCTGCCGTGGAGTTCAATTTCTCTCCGCTCTTCCTCTTTCCCTGCCCTTTCCTTCTCTCTCTCCTCTTCCAAATGCACCCAATTATCCATCTCCGCCGCCCTCGAAACCGCCGCCGCCGACGATGTCCAGCAGCTGTCGGCTCGGGAGAGGAGGAGGCTGAGGAATGAGAGAAGAGAGATTAAAACCACTACCAATTGGAGAGAAGAAGTGGAAGAGAGGCTCTGTAAGAAGCCGAAGAAGGAATTTGCCTCTTGGACTGAGAAGCTCAACCTCGATTACCTCGCTAAATTGGGCCCTCAATGGTGGGTTATGAGGGTCGCTCGCGTTAGAGGTCAGGAAATTGTCGAACGCCTCGCCCGTTCTCTTGCTAGGAACTACCCCGACCTCGATTTCAAGGTGAAATTTCTGCATTCGACTGTTTGATTTCTAGGTTTTTAGTTTCTGGGGCTGGTGTGTTGCGTTAATTTTCCATGAATTTTCTTGAAATTCATTAACAGAACTCGAAATATAAATCTACTGAGTTCCATTGTTCTGAAACTTAATGGAATGAGTGAATACTATTTCACTAGCTTGAGTTCATCAGTGCTGAAATTGGTAAATTTCTCTACAATGTAGTATTTAGATTAAGAGAAGGAAGGATTTAAGTAAAAGAGTCAAAAGAAAAAATAATAGGTTATGAAGATCTTGAAATATTCCTTTTGTTAAACTTTACATTAAATTCCAGAAACGAAGGTATCAACCTGATAAAGAATAAATCAACGGGAATCATTTTTCTAGCTGGGATGAATTGTTTGAGATGAGACCATGTGTATCAATAGCTCAATTTCTTAAAGTTGGATTGCAGATATATTACCCATCAGTCCAGGAGAAGAGGCGACTAAAGAACGGTACTTACATGGTTAAACCAAGAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATACATGACTTCATTCGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGCGCGAAGGTCGGGAATACGTGAGTCGTTTATGTTGTTTTATTCTATGTTAAAGCAGCTAAGCAACTATTTCTTCTTTAGGTTAGGAGATAATTCTACTCAGAAATTGTAAAGAAACTGCAGAAAGGGAATGAGGGAACTGCATTGGCCATTTGGGGTTATGATATTTATATGCCTTAATAGTCTAAAACTGAAGGATTTTGGTGTCTAGGTGGCTATGGCACAAAACTAAGTCTAAAAATCTGAATTATAAAATTTTTTGGAATAATTTTGGATTGAAGTTTCAGGTTCCGAATTTTTAAAAATGTCATCTTTTCCTATTTTGAATATGTCTTATCGTTCTCAGTTAGTCTGTTATTCTGATAGTTTGGGCAATACACAGGAAACGACAGATAAACAAACCAAAGCCAGTATCTGAAGCTGATATGGAAGCAATCTTCAAAGAGGCAAAGGAAGAGCAAGAAAGACATGACCAGGATTTTCTTGAGAAAGAGCAAGAGAAAGCTCCAAACTCTACCATACACAAGACCGACTTAGATACAAATGGTACTACTGCTACAAAGCCCAAAGGAAGATTGAAAAAAGCCGTTAATGCTTTGTCTCCTGGGTCAACTGTTCGGGTGGCATCCGGGACTTTCGCAGAATTTGAAGGTTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTATGCTGTTTTCTTCTAGACTATAATTGTTTTTGTGCTCAGGACCCGTTAAGAAGCATTTGAGAGCTTTTTTATTATTTTTTTTTTAACCATAATTGATCGTTTTAGAGATTGCTACATAGAAGAGAGCAAATGAATTTTAATTTGATTTCCTTCATGCAGGTAACGGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGACCTTGACATTGGTGATATTGTAGTTGAGACAACA

mRNA sequence

ATGGCCTTTGGGCTTCTGCCGTGGAGTTCAATTTCTCTCCGCTCTTCCTCTTTCCCTGCCCTTTCCTTCTCTCTCTCCTCTTCCAAATGCACCCAATTATCCATCTCCGCCGCCCTCGAAACCGCCGCCGCCGACGATGTCCAGCAGCTGTCGGCTCGGGAGAGGAGGAGGCTGAGGAATGAGAGAAGAGAGATTAAAACCACTACCAATTGGAGAGAAGAAGTGGAAGAGAGGCTCTGTAAGAAGCCGAAGAAGGAATTTGCCTCTTGGACTGAGAAGCTCAACCTCGATTACCTCGCTAAATTGGGCCCTCAATGGTGGGTTATGAGGGTCGCTCGCGTTAGAGGTCAGGAAATTGTCGAACGCCTCGCCCGTTCTCTTGCTAGGAACTACCCCGACCTCGATTTCAAGATATATTACCCATCAGTCCAGGAGAAGAGGCGACTAAAGAACGGTACTTACATGGTTAAACCAAGAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATACATGACTTCATTCGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGCGCGAAGGTCGGGAATACGAAACGACAGATAAACAAACCAAAGCCAGTATCTGAAGCTGATATGGAAGCAATCTTCAAAGAGGCAAAGGAAGAGCAAGAAAGACATGACCAGGATTTTCTTGAGAAAGAGCAAGAGAAAGCTCCAAACTCTACCATACACAAGACCGACTTAGATACAAATGGTACTACTGCTACAAAGCCCAAAGGAAGATTGAAAAAAGCCGTTAATGCTTTGTCTCCTGGGTCAACTGTTCGGGTGGCATCCGGGACTTTCGCAGAATTTGAAGGTTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACGGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGACCTTGACATTGGTGATATTGTAGTTGAGACAACA

Coding sequence (CDS)

ATGGCCTTTGGGCTTCTGCCGTGGAGTTCAATTTCTCTCCGCTCTTCCTCTTTCCCTGCCCTTTCCTTCTCTCTCTCCTCTTCCAAATGCACCCAATTATCCATCTCCGCCGCCCTCGAAACCGCCGCCGCCGACGATGTCCAGCAGCTGTCGGCTCGGGAGAGGAGGAGGCTGAGGAATGAGAGAAGAGAGATTAAAACCACTACCAATTGGAGAGAAGAAGTGGAAGAGAGGCTCTGTAAGAAGCCGAAGAAGGAATTTGCCTCTTGGACTGAGAAGCTCAACCTCGATTACCTCGCTAAATTGGGCCCTCAATGGTGGGTTATGAGGGTCGCTCGCGTTAGAGGTCAGGAAATTGTCGAACGCCTCGCCCGTTCTCTTGCTAGGAACTACCCCGACCTCGATTTCAAGATATATTACCCATCAGTCCAGGAGAAGAGGCGACTAAAGAACGGTACTTACATGGTTAAACCAAGAGCTGTTTTTCCTGGATCTGTATTTATAAGGTGTATCATGAACAAGGAGATACATGACTTCATTCGAGAGTGTGATGGAGTTGGAGGCTTTGTTGGCGCGAAGGTCGGGAATACGAAACGACAGATAAACAAACCAAAGCCAGTATCTGAAGCTGATATGGAAGCAATCTTCAAAGAGGCAAAGGAAGAGCAAGAAAGACATGACCAGGATTTTCTTGAGAAAGAGCAAGAGAAAGCTCCAAACTCTACCATACACAAGACCGACTTAGATACAAATGGTACTACTGCTACAAAGCCCAAAGGAAGATTGAAAAAAGCCGTTAATGCTTTGTCTCCTGGGTCAACTGTTCGGGTGGCATCCGGGACTTTCGCAGAATTTGAAGGTTCTCTTAAGAAGCTGAACCGTAAAAGTGGAAAGGTAACGGTGGGATTCACACTATTTGGGAAGGAAACCCTTGTAGACCTTGACATTGGTGATATTGTAGTTGAGACAACA

Protein sequence

MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIVVETT
Homology
BLAST of MS013960 vs. NCBI nr
Match: XP_022151589.1 (uncharacterized protein LOC111019492 [Momordica charantia])

HSP 1 Score: 622.9 bits (1605), Expect = 1.6e-174
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN 60
           MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN
Sbjct: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN 60

Query: 61  ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV 120
           ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV
Sbjct: 61  ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV 120

Query: 121 ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI 180
           ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI
Sbjct: 121 ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI 180

Query: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN 240
           RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN
Sbjct: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN 240

Query: 241 STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 300
           STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
Sbjct: 241 STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 300

Query: 301 VGFTLFGKETLVDLDIGDIVVETT 325
           VGFTLFGKETLVDLDIGDIVVETT
Sbjct: 301 VGFTLFGKETLVDLDIGDIVVETT 324

BLAST of MS013960 vs. NCBI nr
Match: XP_038880828.1 (transcription termination/antitermination protein NusG isoform X1 [Benincasa hispida])

HSP 1 Score: 563.1 bits (1450), Expect = 1.5e-156
Identity = 295/324 (91.05%), Postives = 309/324 (95.37%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET-AAADDVQQLSARERRRLR 60
           MA GLL WS ISLRS SFPALSFSLSS K TQLSISA +ET +AADD+QQLSARERR+LR
Sbjct: 1   MACGLLIWSPISLRSISFPALSFSLSSPKRTQLSISATVETPSAADDIQQLSARERRKLR 60

Query: 61  NERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEI 120
           NERREIKTTTNWREEVEERLCKKPKKEFA+WTEKLNLDYL+KLGPQWWVMRVARVRGQEI
Sbjct: 61  NERREIKTTTNWREEVEERLCKKPKKEFATWTEKLNLDYLSKLGPQWWVMRVARVRGQEI 120

Query: 121 VERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDF 180
           VERLARSLARNYPDLDFKIYYPSVQEKR+LKNGTY VKP+A+FPGSVFIRCIMNKEIHDF
Sbjct: 121 VERLARSLARNYPDLDFKIYYPSVQEKRKLKNGTYTVKPKALFPGSVFIRCIMNKEIHDF 180

Query: 181 IRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAP 240
           IRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQ++AP
Sbjct: 181 IRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQDRAP 240

Query: 241 NSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKV 300
           NS+  +TDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGKV
Sbjct: 241 NSSALETDLDTNGTTATKQKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGKV 300

Query: 301 TVGFTLFGKETLVDLDIGDIVVET 324
           TVGFTLFGKETLVDLDIGDI+VET
Sbjct: 301 TVGFTLFGKETLVDLDIGDIIVET 324

BLAST of MS013960 vs. NCBI nr
Match: XP_008448915.1 (PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo] >XP_008448924.1 PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo])

HSP 1 Score: 562.8 bits (1449), Expect = 2.0e-156
Identity = 295/325 (90.77%), Postives = 311/325 (95.69%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60
           MA+GLL WS ISL S+S PALSFSLSSS+ TQLSISA++ET  AAADDVQQLSAR+RR+L
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVRGQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY VKP+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEA 240

Query: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIVVET 324
           VTVGFTLFGKETLVDLDIGDI+VET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVET 325

BLAST of MS013960 vs. NCBI nr
Match: XP_004147896.1 (uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical protein Csa_018004 [Cucumis sativus])

HSP 1 Score: 554.3 bits (1427), Expect = 7.0e-154
Identity = 289/325 (88.92%), Postives = 307/325 (94.46%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60
           MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+L
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240

Query: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN++  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIVVET 324
           VTVGFTLFGKETLVDLDIGDI+VET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVET 325

BLAST of MS013960 vs. NCBI nr
Match: XP_023518856.1 (uncharacterized protein LOC111782252 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 537.7 bits (1384), Expect = 6.8e-149
Identity = 284/323 (87.93%), Postives = 303/323 (93.81%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN 60
           MA GLL W+++ LRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRN
Sbjct: 1   MACGLLTWTALPLRSHSFPSLSFSLSSSLRTQLSISAALET-AADDVLQLSARERRRLRN 60

Query: 61  ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV 120
           ERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYLAKLGPQWWVMRV+RVRGQEIV
Sbjct: 61  ERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQEIV 120

Query: 121 ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI 180
           ERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFI
Sbjct: 121 ERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFI 180

Query: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN 240
           RECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAKE+QERHDQ FLEKE+E+APN
Sbjct: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEQQERHDQAFLEKEKEQAPN 240

Query: 241 STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 300
            ++ +TDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKK+NRKSGKVT
Sbjct: 241 PSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSGKVT 300

Query: 301 VGFTLFGKETLVDLDIGDIVVET 324
           VGFTLFGKETLV+LDIGDI VET
Sbjct: 301 VGFTLFGKETLVELDIGDIKVET 321

BLAST of MS013960 vs. ExPASy Swiss-Prot
Match: Q06795 (Transcription termination/antitermination protein NusG OS=Bacillus subtilis (strain 168) OX=224308 GN=nusG PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.7e-09
Identity = 51/187 (27.27%), Postives = 78/187 (41.71%), Query Frame = 0

Query: 133 DLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIRECDGVGGFVGA 192
           D  F++  P  +E+  +KNG   V  + VFPG V +  +M  +    +R   GV GFVG+
Sbjct: 33  DKIFRVVVPE-EEETDIKNGKKKVVKKKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGS 92

Query: 193 KVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTDLDTNG 252
                    +KP P+   + E I K    ++ + D DF  KE                  
Sbjct: 93  AGSG-----SKPTPLLPGEAETILKRMGMDERKTDIDFELKE------------------ 152

Query: 253 TTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFGKETLV 312
                                TV+V  G FA F GS+++++    KV V   +FG+ET V
Sbjct: 153 ---------------------TVKVIDGPFANFTGSIEEIDYDKSKVKVFVNMFGRETPV 174

Query: 313 DLDIGDI 320
           +L+   I
Sbjct: 213 ELEFTQI 174

BLAST of MS013960 vs. ExPASy Swiss-Prot
Match: P35872 (Transcription termination/antitermination protein NusG OS=Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8) OX=300852 GN=nusG PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.1e-08
Identity = 52/193 (26.94%), Postives = 82/193 (42.49%), Query Frame = 0

Query: 133 DLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMN-----KEIHDFIRECDGVG 192
           D  F++  P+ +     + G   V  + +FPG +FI+  +       E  + +R   G+ 
Sbjct: 33  DKIFQVLIPTEEVVELREGGKKEVVRKKLFPGYLFIQMDLGDEEEPNEAWEVVRGTPGIT 92

Query: 193 GFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTIHKTD 252
           GFVGA +        +P P+S  ++  I                                
Sbjct: 93  GFVGAGM--------RPVPLSPDEVRHI-------------------------------- 152

Query: 253 LDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVTVGFTLFG 312
           L+ +G    K      KA  A   G  VRV SG FA+F G++ ++N + GKV V  T+FG
Sbjct: 153 LEVSGLLGKK---EAPKAQVAFREGDQVRVVSGPFADFTGTVTEINPERGKVKVMVTIFG 182

Query: 313 KETLVDLDIGDIV 321
           +ET V+LD   +V
Sbjct: 213 RETPVELDFSQVV 182

BLAST of MS013960 vs. ExPASy Swiss-Prot
Match: P65591 (Transcription termination/antitermination protein NusG OS=Neisseria meningitidis serogroup A / serotype 4A (strain DSM 15465 / Z2491) OX=122587 GN=nusG PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08
Identity = 47/218 (21.56%), Postives = 89/218 (40.83%), Query Frame = 0

Query: 102 LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAV 161
           +  +W+V++      + +   L   +AR      F      V++   ++NG   +  R  
Sbjct: 1   MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEKVVDIRNGRKTISERKS 60

Query: 162 FPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKE 221
           +PG V +   M  +    ++    V GF+G +        N+P P+S+ + E I ++ + 
Sbjct: 61  YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRA-------NRPTPISQREAEIILQQVQ- 120

Query: 222 EQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGT 281
                                          T   KPK +++  V     G  VRV  G 
Sbjct: 121 -------------------------------TGIEKPKPKVEFEV-----GQQVRVNEGP 174

Query: 282 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 320
           FA+F G ++++N +  K+ V   +FG+ET V+L+   +
Sbjct: 181 FADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQV 174

BLAST of MS013960 vs. ExPASy Swiss-Prot
Match: P65592 (Transcription termination/antitermination protein NusG OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=nusG PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.9e-08
Identity = 47/218 (21.56%), Postives = 89/218 (40.83%), Query Frame = 0

Query: 102 LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAV 161
           +  +W+V++      + +   L   +AR      F      V++   ++NG   +  R  
Sbjct: 1   MSKKWYVVQAYSGFEKNVQRILEERIAREEMGDYFGQILVPVEKVVDIRNGRKTISERKS 60

Query: 162 FPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKE 221
           +PG V +   M  +    ++    V GF+G +        N+P P+S+ + E I ++ + 
Sbjct: 61  YPGYVLVEMEMTDDSWHLVKSTPRVSGFIGGRA-------NRPTPISQREAEIILQQVQ- 120

Query: 222 EQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGT 281
                                          T   KPK +++  V     G  VRV  G 
Sbjct: 121 -------------------------------TGIEKPKPKVEFEV-----GQQVRVNEGP 174

Query: 282 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 320
           FA+F G ++++N +  K+ V   +FG+ET V+L+   +
Sbjct: 181 FADFNGVVEEVNYERNKLRVSVQIFGRETPVELEFSQV 174

BLAST of MS013960 vs. ExPASy Swiss-Prot
Match: Q9HWC4 (Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=nusG PE=3 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.4e-08
Identity = 44/218 (20.18%), Postives = 87/218 (39.91%), Query Frame = 0

Query: 102 LGPQWWVMRVARVRGQEIVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAV 161
           +  +W+V+       + ++  L   +     + +F       +E   ++NG      R  
Sbjct: 1   MAKRWYVVHAYSGYEKHVMRSLIERVKLAGMEEEFGEILVPTEEVVEMRNGQKRKSERKF 60

Query: 162 FPGSVFIRCIMNKEIHDFIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKE 221
           FPG V ++  MN+     +++   V GF+G          +KP P+++ + +AI +   +
Sbjct: 61  FPGYVLVQMEMNEGTWHLVKDTPRVMGFIGGTA-------DKPAPITDREADAILRRVAD 120

Query: 222 EQERHDQDFLEKEQEKAPNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGT 281
             ++                               KPK           PG TVRV  G 
Sbjct: 121 SGDK------------------------------PKPK-------TLFEPGETVRVIDGP 174

Query: 282 FAEFEGSLKKLNRKSGKVTVGFTLFGKETLVDLDIGDI 320
           FA+F G ++++N +  ++ V   +FG+ T V+L+   +
Sbjct: 181 FADFNGVVEEVNYEKSRIQVAVLIFGRSTPVELEFSQV 174

BLAST of MS013960 vs. ExPASy TrEMBL
Match: A0A6J1DDH4 (uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019492 PE=4 SV=1)

HSP 1 Score: 622.9 bits (1605), Expect = 7.8e-175
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN 60
           MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN
Sbjct: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN 60

Query: 61  ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV 120
           ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV
Sbjct: 61  ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV 120

Query: 121 ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI 180
           ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI
Sbjct: 121 ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI 180

Query: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN 240
           RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN
Sbjct: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN 240

Query: 241 STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 300
           STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT
Sbjct: 241 STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 300

Query: 301 VGFTLFGKETLVDLDIGDIVVETT 325
           VGFTLFGKETLVDLDIGDIVVETT
Sbjct: 301 VGFTLFGKETLVDLDIGDIVVETT 324

BLAST of MS013960 vs. ExPASy TrEMBL
Match: A0A1S3BKU2 (transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 GN=LOC103490936 PE=4 SV=1)

HSP 1 Score: 562.8 bits (1449), Expect = 9.5e-157
Identity = 295/325 (90.77%), Postives = 311/325 (95.69%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60
           MA+GLL WS ISL S+S PALSFSLSSS+ TQLSISA++ET  AAADDVQQLSAR+RR+L
Sbjct: 1   MAYGLLIWSPISLCSTSLPALSFSLSSSRRTQLSISASVETPAAAADDVQQLSARDRRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVRGQE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFATWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180
           IVERLARSLARNYPDLDFKIYYPSV+EKR+LKNGTY VKP+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARSLARNYPDLDFKIYYPSVKEKRKLKNGTYTVKPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQAFLEKEQEEA 240

Query: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PNS+  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNSSALKTDLDTNGTTATKHKGRGKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIVVET 324
           VTVGFTLFGKETLVDLDIGDI+VET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVET 325

BLAST of MS013960 vs. ExPASy TrEMBL
Match: A0A0A0KZV1 (NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV=1)

HSP 1 Score: 554.3 bits (1427), Expect = 3.4e-154
Identity = 289/325 (88.92%), Postives = 307/325 (94.46%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALET--AAADDVQQLSARERRRL 60
           MA GLL WSS+SL S+SFPALSFSLSSS+ TQLS+SA++ET  AAADD QQLS RERR+L
Sbjct: 1   MACGLLVWSSVSLCSTSFPALSFSLSSSRRTQLSVSASVETPAAAADDAQQLSVRERRKL 60

Query: 61  RNERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQE 120
           RNERREIKTTTNWREEVEERLC+KPKKEFA+WTEKLNLDYLAKLGPQWWVMRVARVR QE
Sbjct: 61  RNERREIKTTTNWREEVEERLCRKPKKEFANWTEKLNLDYLAKLGPQWWVMRVARVRSQE 120

Query: 121 IVERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHD 180
           IVERLAR LARNYPDLDFKIYYPSV+EKR+LKNGTY V P+AVFPGSVFIRC+MNKEIHD
Sbjct: 121 IVERLARCLARNYPDLDFKIYYPSVKEKRKLKNGTYTVTPKAVFPGSVFIRCVMNKEIHD 180

Query: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKA 240
           FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAK+EQERHDQ FLEKEQE+A
Sbjct: 181 FIRECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKDEQERHDQAFLEKEQEEA 240

Query: 241 PNSTIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300
           PN++  KTDLDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKKLNRKSGK
Sbjct: 241 PNTSALKTDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKLNRKSGK 300

Query: 301 VTVGFTLFGKETLVDLDIGDIVVET 324
           VTVGFTLFGKETLVDLDIGDI+VET
Sbjct: 301 VTVGFTLFGKETLVDLDIGDIIVET 325

BLAST of MS013960 vs. ExPASy TrEMBL
Match: A0A6J1EV13 (uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC111438223 PE=4 SV=1)

HSP 1 Score: 536.6 bits (1381), Expect = 7.3e-149
Identity = 283/323 (87.62%), Postives = 303/323 (93.81%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN 60
           MA GLL W+++ LRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRN
Sbjct: 1   MACGLLTWTTLPLRSPSFPSLSFSLSSSLRTQLSISAALET-AADDVLQLSARERRRLRN 60

Query: 61  ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV 120
           ERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYLAKLGPQWWVMRV+RVRGQEIV
Sbjct: 61  ERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLAKLGPQWWVMRVSRVRGQEIV 120

Query: 121 ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI 180
           ERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFI
Sbjct: 121 ERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFI 180

Query: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN 240
           RECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAKEEQERHDQ FLEKE+E+APN
Sbjct: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKEKEQAPN 240

Query: 241 STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 300
            ++ +TDLDTNGTTATK KGR KKAVN LSPGSTVRV+SGTFAEFEGSLKK+NRKS KVT
Sbjct: 241 PSVLETDLDTNGTTATKHKGRPKKAVNTLSPGSTVRVSSGTFAEFEGSLKKVNRKSKKVT 300

Query: 301 VGFTLFGKETLVDLDIGDIVVET 324
           VGFTLFGKETLV+LDIGDI+VET
Sbjct: 301 VGFTLFGKETLVELDIGDIIVET 321

BLAST of MS013960 vs. ExPASy TrEMBL
Match: A0A6J1HQX6 (uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.1e-147
Identity = 282/323 (87.31%), Postives = 302/323 (93.50%), Query Frame = 0

Query: 1   MAFGLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRN 60
           MA  LL W+++SLRS SFP+LSFSLSSS  TQLSISAALET AADDV QLSARERRRLRN
Sbjct: 1   MACRLLTWTTLSLRSPSFPSLSFSLSSSLRTQLSISAALET-AADDVLQLSARERRRLRN 60

Query: 61  ERREIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIV 120
           ERRE K TTNWREEVEERLCKKPKKEFA+WTEKLNLDYL+KLGPQWWVMRV+RVRGQEIV
Sbjct: 61  ERRETK-TTNWREEVEERLCKKPKKEFANWTEKLNLDYLSKLGPQWWVMRVSRVRGQEIV 120

Query: 121 ERLARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFI 180
           ERLARSLARNYPDLDFKIYYPSV EKR+LKNG+Y VKP+AVFPGSVFIRCIMNKE+HDFI
Sbjct: 121 ERLARSLARNYPDLDFKIYYPSVHEKRKLKNGSYTVKPKAVFPGSVFIRCIMNKEMHDFI 180

Query: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPN 240
           RECDGVGGFVGAKVGNTKRQINKPKPVS+ DMEAIFKEAKEEQERHDQ FLEK++E+APN
Sbjct: 181 RECDGVGGFVGAKVGNTKRQINKPKPVSQDDMEAIFKEAKEEQERHDQAFLEKQKEQAPN 240

Query: 241 STIHKTDLDTNGTTATKPKGRLKKAVNALSPGSTVRVASGTFAEFEGSLKKLNRKSGKVT 300
            ++ +T LDTNGTTATK KGR KKAVN LSPGSTVRVASGTFAEFEGSLKK+NRKSGKVT
Sbjct: 241 PSVLETGLDTNGTTATKHKGRPKKAVNTLSPGSTVRVASGTFAEFEGSLKKVNRKSGKVT 300

Query: 301 VGFTLFGKETLVDLDIGDIVVET 324
           VGFTLFGKETLV LDIGDI+VET
Sbjct: 301 VGFTLFGKETLVVLDIGDIIVET 321

BLAST of MS013960 vs. TAIR 10
Match: AT3G09210.1 (plastid transcriptionally active 13 )

HSP 1 Score: 331.3 bits (848), Expect = 9.0e-91
Identity = 187/335 (55.82%), Postives = 242/335 (72.24%), Query Frame = 0

Query: 4   GLLPWSSISLRSSSFPALSFSLSSSKCTQLSISAALETAAADDVQQLSARERRRLRNERR 63
           GLL WS    RSS  P++   ++    TQ SI+A +     +   QL+A+ERR+LRNERR
Sbjct: 7   GLLQWS----RSSLIPSIYTPINK---TQFSIAACV----IERNHQLTAKERRQLRNERR 66

Query: 64  EIKTTTNWREEVEERLCKKPKKEFASWTEKLNLDYLAKLGPQWWVMRVARVRGQEIVERL 123
           E K   +WREEVEE+L KKPKK +A+WTE+LNLD LA+ GPQWW +RV+R+RG E  + L
Sbjct: 67  ESKLGYSWREEVEEKLIKKPKKRYATWTEELNLDTLAESGPQWWAVRVSRLRGHETAQIL 126

Query: 124 ARSLARNYPDLDFKIYYPSVQEKRRLKNGTYMVKPRAVFPGSVFIRCIMNKEIHDFIREC 183
           AR+LAR +P+++F +Y PSVQ KR+LKNG+  VKP+ VFPG +FIRCI+NKEIHD IR+ 
Sbjct: 127 ARALARQFPEMEFTVYAPSVQVKRKLKNGSISVKPKPVFPGCIFIRCILNKEIHDSIRDV 186

Query: 184 DGVGGFVGAKVGNTKRQINKPKPVSEADMEAIFKEAKEEQERHDQDFLEKEQEKAPNSTI 243
           DGVGGF+G+KVGNTKRQINKP+PV ++D+EAIFK+AKE QE+ D +F E ++ +   S +
Sbjct: 187 DGVGGFIGSKVGNTKRQINKPRPVDDSDLEAIFKQAKEAQEKADSEFEEADRAEEEASIL 246

Query: 244 HKTDL------DTNGTTA-TKPKGRLKKAVNA---------LSPGSTVRVASGTFAEFEG 303
              +L      D   T A +KPK   +KA  A         L+ GSTVRV SGTFAEF G
Sbjct: 247 ASQELLALSNSDVIETVAESKPKRAPRKATLATETKAKKKKLAAGSTVRVLSGTFAEFVG 306

Query: 304 SLKKLNRKSGKVTVGFTLFGKETLVDLDIGDIVVE 323
           +LKKLNRK+ K TVGFTLFGKETLV++DI ++V E
Sbjct: 307 NLKKLNRKTAKATVGFTLFGKETLVEIDINELVPE 330

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022151589.11.6e-174100.00uncharacterized protein LOC111019492 [Momordica charantia][more]
XP_038880828.11.5e-15691.05transcription termination/antitermination protein NusG isoform X1 [Benincasa his... [more]
XP_008448915.12.0e-15690.77PREDICTED: transcription termination/antitermination protein NusG [Cucumis melo]... [more]
XP_004147896.17.0e-15488.92uncharacterized protein LOC101211195 [Cucumis sativus] >KGN54344.1 hypothetical ... [more]
XP_023518856.16.8e-14987.93uncharacterized protein LOC111782252 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
Q067951.7e-0927.27Transcription termination/antitermination protein NusG OS=Bacillus subtilis (str... [more]
P358721.1e-0826.94Transcription termination/antitermination protein NusG OS=Thermus thermophilus (... [more]
P655911.9e-0821.56Transcription termination/antitermination protein NusG OS=Neisseria meningitidis... [more]
P655921.9e-0821.56Transcription termination/antitermination protein NusG OS=Neisseria meningitidis... [more]
Q9HWC42.4e-0820.18Transcription termination/antitermination protein NusG OS=Pseudomonas aeruginosa... [more]
Match NameE-valueIdentityDescription
A0A6J1DDH47.8e-175100.00uncharacterized protein LOC111019492 OS=Momordica charantia OX=3673 GN=LOC111019... [more]
A0A1S3BKU29.5e-15790.77transcription termination/antitermination protein NusG OS=Cucumis melo OX=3656 G... [more]
A0A0A0KZV13.4e-15488.92NGN domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G307370 PE=4 SV... [more]
A0A6J1EV137.3e-14987.62uncharacterized protein LOC111438223 OS=Cucurbita moschata OX=3662 GN=LOC1114382... [more]
A0A6J1HQX61.1e-14787.31uncharacterized protein LOC111465889 OS=Cucurbita maxima OX=3661 GN=LOC111465889... [more]
Match NameE-valueIdentityDescription
AT3G09210.19.0e-9155.82plastid transcriptionally active 13 [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 44..64
NoneNo IPR availableCOILSCoilCoilcoord: 216..236
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..260
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 223..243
NoneNo IPR availablePANTHERPTHR30265:SF4TRANSCRIPTION ANTITERMINATION PROTEIN RFAHcoord: 36..321
NoneNo IPR availableCDDcd09890NGN_plantcoord: 105..216
e-value: 1.03911E-46
score: 151.737
NoneNo IPR availableCDDcd06091KOW_NusGcoord: 269..319
e-value: 1.0652E-12
score: 60.1636
IPR006645NusG, N-terminalSMARTSM00738nusgn_4coord: 103..219
e-value: 2.2E-19
score: 80.4
IPR006645NusG, N-terminalPFAMPF02357NusGcoord: 105..215
e-value: 4.9E-10
score: 39.8
IPR036735NusG, N-terminal domain superfamilyGENE3D3.30.70.940coord: 104..220
e-value: 4.8E-18
score: 67.2
IPR036735NusG, N-terminal domain superfamilySUPERFAMILY82679N-utilization substance G protein NusG, N-terminal domaincoord: 104..221
IPR014722Ribosomal protein L2, domain 2GENE3D2.30.30.30coord: 268..320
e-value: 3.3E-12
score: 48.1
IPR043425NusG-likePANTHERPTHR30265RHO-INTERACTING TRANSCRIPTION TERMINATION FACTOR NUSGcoord: 36..321
IPR008991Translation protein SH3-like domain superfamilySUPERFAMILY50104Translation proteins SH3-like domaincoord: 270..319

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS013960.1MS013960.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated