MS013939 (gene) Bitter gourd (TR) v1

Overview


Name	MS013939
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Clathrin light chain
Location	scaffold607: 1084693 .. 1086538 (+)
RNA-Seq Expression	MS013939
Synteny	MS013939

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCGACGTTCGCCGGAGCTCCTCCTCCGTTCGACGACGGCACCGCCGGCTACGATCCTCGCCTCTCTTCTCAGCGATTCGAATCGTTTTCCAACTTCGAAGCTGAGTCCATCGCGGACTCCGCCGGCGACTCGTCCCCTATCTTCGGCCACCGGTCGGATAATCAGGGCGACGACCTGCTCTCTTCTCATCAGGTTCCGGAAACTCCATCTCCGCCGTCGAATTTCTCGCCAAGCGGAGGATTCTCTGCTTTCTCGCCGGAACAGAACGGGAAGGGCTTTGATGGAGGTTTTGAGGAGTCGGAGGGCCCGATCCTGTCATCTCCGGCGGAGATGGAGCCGGAGGAGGGATTTCCTTTGAGAGAGTGGCGCAGGTGAGTTAACTGTGAAATTTCTTTCCGATTCGAAGGTTTTCGACTTCAGTTTTGAGATTATTCTGTGTTTCTTCACGTTTGAGCCATCGGCATCGTCGAGTCGAAGGCTCCTCTCTGAGATTAAACGGTTTTACTTATGAACTGAATTACAATTCCTCTTATGGATGAACACATGGAAGTAATTAGGGTTCGTTAAGCTGTGAATGACAGATTGAATGCGATTCGACTGGAAGAGAAGGAGAAGAGGGAGAAGGAGCTGTTGCAGGAGATAATCGATGAAGCCGATCAGTACAAAATTGACTTCTACAGGAGACGCAAGCTTGCTCTTGATAACAATAAAGCTTCAAATAGGGACAAGGAGAAGGTGAATGGCGATTTCTCCATTATATACAGAAATCTTCTCTCGTTCTTCTTTAACATCTGATGAAACACAAAATCAATACTATTTTCTGCGATTGTTGAATCGATTCTGCTAGCTAGTTTCTTGTGGTTGGGATTTAGATTTTCGCTTCATAATGTGTTCCCAACATGTTCTCATGCTTGAATTCGAAGCTTAACTAGGACATCCAACTAGAGAGGAGGGTGAACCAGTACCACTTCGATCCTTGAGACGATGGAAGCAGGTTAAGAAATACTTAATAGAATTTATAGTCACTACCTATATTAACAAGATATACCTTCCTTTTTGGTGGTCGAAGCAATCCTCAGTTGGATGATCTCTTAGCTGATTTACTAGGAAGCATGCAAGTGAGAACAAAGTATGCTAGAAGTACTTAAGTTGGTCTTTAGGGATTCGCCTCTCTAAGTAGCTTAGATAAAAGACGATGACGCAGCTAAGTCGTAGAGGATGCAGGTGAGTGTCGGGACAATTAGGTTCCGAATTCTGGGCCTAGAGCATTACATTAACGCTTAACTATTACTTACTATCAATTGGGGAGGTAACGATATTTTAGAGACTTGAACTCAAGACTTCGAGAGTGTGGTGAGGTTGAATCCTAATATTTGCTAAGATTGTCTTTGTTTCTGGTGCATAGAGAGAATGAAAATGGATTTACAGAATCCCCCATTAATAATTTCTTCAATCTTAACCAGATTTGAACTTCATGTGACAGCAATATCTAGCAAACCGAGAGAAGTTCCACGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTGATCCCCAATGAGGTTCCAACTATAGAACAGAAGGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAAGGTCCCAAGCCCGGGAAGCCGACCGATCTTTCGAGAATGCGTCAAATACATTTGAAGCTCAAACACAATACCCCTCTTCACATGAGGCCCAAGCCACCACCATCATCAGAATCTAAAACAGATCCTAAAAGGGATTCTTCTTCTGCTGCTGCTGCTGCTGGCGCATCTTCGACTACTGGTTCGGGTTCTTCGAGTTCTGCTACTCCAAAG

mRNA sequence

ATGTCGACGTTCGCCGGAGCTCCTCCTCCGTTCGACGACGGCACCGCCGGCTACGATCCTCGCCTCTCTTCTCAGCGATTCGAATCGTTTTCCAACTTCGAAGCTGAGTCCATCGCGGACTCCGCCGGCGACTCGTCCCCTATCTTCGGCCACCGGTCGGATAATCAGGGCGACGACCTGCTCTCTTCTCATCAGGTTCCGGAAACTCCATCTCCGCCGTCGAATTTCTCGCCAAGCGGAGGATTCTCTGCTTTCTCGCCGGAACAGAACGGGAAGGGCTTTGATGGAGGTTTTGAGGAGTCGGAGGGCCCGATCCTGTCATCTCCGGCGGAGATGGAGCCGGAGGAGGGATTTCCTTTGAGAGAGTGGCGCAGATTGAATGCGATTCGACTGGAAGAGAAGGAGAAGAGGGAGAAGGAGCTGTTGCAGGAGATAATCGATGAAGCCGATCAGTACAAAATTGACTTCTACAGGAGACGCAAGCTTGCTCTTGATAACAATAAAGCTTCAAATAGGGACAAGGAGAAGCAATATCTAGCAAACCGAGAGAAGTTCCACGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTGATCCCCAATGAGGTTCCAACTATAGAACAGAAGGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAAGGTCCCAAGCCCGGGAAGCCGACCGATCTTTCGAGAATGCGTCAAATACATTTGAAGCTCAAACACAATACCCCTCTTCACATGAGGCCCAAGCCACCACCATCATCAGAATCTAAAACAGATCCTAAAAGGGATTCTTCTTCTGCTGCTGCTGCTGCTGGCGCATCTTCGACTACTGGTTCGGGTTCTTCGAGTTCTGCTACTCCAAAG

Coding sequence (CDS)

ATGTCGACGTTCGCCGGAGCTCCTCCTCCGTTCGACGACGGCACCGCCGGCTACGATCCTCGCCTCTCTTCTCAGCGATTCGAATCGTTTTCCAACTTCGAAGCTGAGTCCATCGCGGACTCCGCCGGCGACTCGTCCCCTATCTTCGGCCACCGGTCGGATAATCAGGGCGACGACCTGCTCTCTTCTCATCAGGTTCCGGAAACTCCATCTCCGCCGTCGAATTTCTCGCCAAGCGGAGGATTCTCTGCTTTCTCGCCGGAACAGAACGGGAAGGGCTTTGATGGAGGTTTTGAGGAGTCGGAGGGCCCGATCCTGTCATCTCCGGCGGAGATGGAGCCGGAGGAGGGATTTCCTTTGAGAGAGTGGCGCAGATTGAATGCGATTCGACTGGAAGAGAAGGAGAAGAGGGAGAAGGAGCTGTTGCAGGAGATAATCGATGAAGCCGATCAGTACAAAATTGACTTCTACAGGAGACGCAAGCTTGCTCTTGATAACAATAAAGCTTCAAATAGGGACAAGGAGAAGCAATATCTAGCAAACCGAGAGAAGTTCCACGCTGAAGCTGATAAGAACTATTGGAAGGCAATTGCAGAACTGATCCCCAATGAGGTTCCAACTATAGAACAGAAGGGGAAGAAAGACAAGGAGAAGAAGCCTGCCATTGTTGTTATTCAAGGTCCCAAGCCCGGGAAGCCGACCGATCTTTCGAGAATGCGTCAAATACATTTGAAGCTCAAACACAATACCCCTCTTCACATGAGGCCCAAGCCACCACCATCATCAGAATCTAAAACAGATCCTAAAAGGGATTCTTCTTCTGCTGCTGCTGCTGCTGGCGCATCTTCGACTACTGGTTCGGGTTCTTCGAGTTCTGCTACTCCAAAG

Protein sequence

MSTFAGAPPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDLLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK

Homology

[Close]

BLAST of MS013939 vs. NCBI nr
Match: XP_022151477.1 (clathrin light chain 2-like [Momordica charantia])

HSP 1 Score: 560.5 bits (1443), Expect = 8.9e-156
Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 1   MSTFAGAPPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDL 60
           MSTFAGAPPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDL
Sbjct: 1   MSTFAGAPPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDL 60

Query: 61  LSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPL 120
           LSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPL
Sbjct: 61  LSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPL 120

Query: 121 REWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLA 180
           REWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLA
Sbjct: 121 REWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLA 180

Query: 181 NREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMR 240
           NREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMR
Sbjct: 181 NREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMR 240

Query: 241 QIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK 297
           QIHLKLK NTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK
Sbjct: 241 QIHLKLKRNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK 296

[Close]

BLAST of MS013939 vs. NCBI nr
Match: XP_038882671.1 (clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light chain 2-like [Benincasa hispida])

HSP 1 Score: 428.3 bits (1100), Expect = 5.3e-116
Identity = 233/297 (78.45%), Postives = 257/297 (86.53%), Query Frame = 0


Query: 1   MSTFAGAPPP-FDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG PPP FDDGT G++PRL+SQRFE+FS FE ES ADSAGDSSPIFG+ + NQGDD
Sbjct: 1   MSTFAGTPPPSFDDGTIGFEPRLASQRFETFSTFETESAADSAGDSSPIFGNMAYNQGDD 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           L        +P+PP+NFS  GGFS+FSP+QNGKGFDGG+ ES+GPILSSP  MEPEEGFP
Sbjct: 61  L--------SPTPPTNFSADGGFSSFSPQQNGKGFDGGYGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEK KREKELL+EIIDEADQYKI+FYRRRKLALDN K SNRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKLKREKELLEEIIDEADQYKIEFYRRRKLALDNTKTSNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPK--PPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQI LKLKHNTPLHM+PK  PPP  E K++ K+DSS    AAG +S  GSG ++S T
Sbjct: 241 RQIQLKLKHNTPLHMKPKQPPPPPVEPKSESKKDSS----AAGMTSAAGSGLATSRT 285

[Close]

BLAST of MS013939 vs. NCBI nr
Match: XP_004147885.1 (clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_018069 [Cucumis sativus])

HSP 1 Score: 410.6 bits (1054), Expect = 1.1e-110
Identity = 227/295 (76.95%), Postives = 253/295 (85.76%), Query Frame = 0


Query: 1   MSTFAGAPP-PFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG PP PFDD T G++PRL+SQRFE+FS FEAE    SA DSSPIFG+   +QGD 
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAE----SADDSSPIFGNLPYDQGDG 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           +         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  V--------EPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEKRE ELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQIHLKLKHNTPLHM+PKPPP +E K + K+DSS    AAGA+   GSGS++S T
Sbjct: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKAESKKDSS----AAGATLAAGSGSAASRT 278

[Close]

BLAST of MS013939 vs. NCBI nr
Match: TYJ96292.1 (clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 409.8 bits (1052), Expect = 1.9e-110
Identity = 225/295 (76.27%), Postives = 256/295 (86.78%), Query Frame = 0


Query: 1   MSTFAG-APPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG +PPPF+D T G++PRL+SQRFE+FS F+AE    SA DSSPIFG+   + GDD
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           L         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  L--------PPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAI+VIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQIHLKLKHNTPLHM+PKPPP +E K++ K+DSS    AAGA+ T GSG ++S T
Sbjct: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKSESKKDSS----AAGATLTAGSGLAASRT 278

[Close]

BLAST of MS013939 vs. NCBI nr
Match: XP_008449287.1 (PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin light chain 2-like [Cucumis melo var. makuwa])

HSP 1 Score: 409.5 bits (1051), Expect = 2.5e-110
Identity = 225/295 (76.27%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MSTFAG-APPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG +PPPF+D T G+DPRL+SQRFE+FS F+AE    SA DSSPIFG+   + GDD
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           L         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  L--------PPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAI+VIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQIHLKLKHNTPLHM+PKPPP +E K++ K+DSS    AAGA+   GSG ++S T
Sbjct: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKSESKKDSS----AAGATLAAGSGLAASRT 278

[Close]

BLAST of MS013939 vs. ExPASy Swiss-Prot
Match: O04209 (Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1)

HSP 1 Score: 219.5 bits (558), Expect = 4.9e-56
Identity = 130/246 (52.85%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 31  SNFEAES---IADSAGDSSPIFGHRSDNQGDDLLSSHQVPETPSPPSNFSPSGGFSAFSP 90
           S FE +S   + D A +S P+ G                 E        +PS  + A+S 
Sbjct: 2   SAFEDDSFVILNDDASESVPVSGSFDATDSFSAFDGSLQVEDSVDDVFAAPSSDYGAYS- 61

Query: 91  EQNGKGFDGGFEESEGPILSSPAEMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIID 150
             NG G  G   + +GPIL  P+EME +EGF LREWRR NAI+LEEKEKREKELL++II+
Sbjct: 62  --NGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIE 121

Query: 151 EADQYKIDFYRRRKLALDNNKASNRDKEKQYLANREKFHAEADKNYWKAIAELIPNEVPT 210
           EADQYK +F+++ ++  +NNKA+NR+KEK YL N+EKF+AE+ KNYWKAIAEL+P EVPT
Sbjct: 122 EADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPT 181

Query: 211 IE-QKGKKDKE--KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMR-PKPPPSSE 270
           IE ++GKK+++  KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H++    PPS E
Sbjct: 182 IEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQPPSEE 241

[Close]

BLAST of MS013939 vs. ExPASy Swiss-Prot
Match: F4J5M9 (Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1)

HSP 1 Score: 218.0 bits (554), Expect = 1.4e-55
Identity = 136/265 (51.32%), Postives = 167/265 (63.02%), Query Frame = 0


Query: 12  DDGTAG----YDPRLSSQRFE-SFSNFEAESIADS---AGDSSPIFGHRSDNQGDDLLSS 71
           D G  G    Y+ R  SQRF+ SFSNF+++   +S    GDSSP                
Sbjct: 22  DGGDGGNFTAYESRFQSQRFDSSFSNFDSQPEKESDLPCGDSSP---------------- 81

Query: 72  HQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPLREW 131
              PET SPPS  S                    F+++   IL  P+ ME EEGF LREW
Sbjct: 82  --RPETQSPPSINS--------------------FDDTNDSILPPPSAMEKEEGFALREW 141

Query: 132 RRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLANRE 191
           RRLNA+RLEEKEK EKE++Q+I++ A+QYK +FY +R + ++NNK  NR+KEK +L N+E
Sbjct: 142 RRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNVTIENNKKLNREKEKFFLENQE 201

Query: 192 KFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIH 251
           KF+AEADKN WKAIAELIP EVP IE +G  +K+K   I VIQGPKPGKPTDLSRMRQ+ 
Sbjct: 202 KFYAEADKNNWKAIAELIPREVPVIENRG--NKKKTATITVIQGPKPGKPTDLSRMRQVL 244

Query: 252 LKLKHNTPLHMRPKPPPSSESKTDP 269
            KLKHN P HM+PK P  S S  DP
Sbjct: 262 TKLKHNPPTHMKPKLP--SPSGADP 244

[Close]

BLAST of MS013939 vs. ExPASy Swiss-Prot
Match: Q5Z402 (Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 PE=2 SV=1)

HSP 1 Score: 199.5 bits (506), Expect = 5.2e-50
Identity = 135/287 (47.04%), Postives = 168/287 (58.54%), Query Frame = 0


Query: 11  FDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDLLSSHQVPETP 70
           FD  TA   P  S    +SF  F+A + A +  D+ P                      P
Sbjct: 5   FDSPTA--SPAASPFDDDSFLRFDAAAPAPAPADAFP----------------------P 64

Query: 71  SP-PSNFSPSGGFSAFSPEQNGKGFDGGF---EESEGPILSSPAEMEPEEGFPLREWRRL 130
           SP P  F P        PE NG   D  F   +   GP+L  P +M  +EGF LREWRR 
Sbjct: 65  SPEPYAFRPDAPSPFGMPEANGSLHDDPFAAPDNDNGPVLPPPNQMGADEGFLLREWRRQ 124

Query: 131 NAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLANREKFH 190
           NAI LEEKEK+EKE+  +II +A ++K  F  +RKL ++ +K  NR++EK YLAN+EKFH
Sbjct: 125 NAILLEEKEKKEKEMRNQIILDAKEFKKAFVEKRKLNVETSKDQNREREKLYLANQEKFH 184

Query: 191 AEADKNYWKAIAELIPNEVPTIEQKG---KKDKEKKPAIVVIQGPKPGKPTDLSRMRQIH 250
           A ADK YWKAI+ELIP+E+  IE++G    KDKEKKP IVVIQGPKPGKPTD+SRMRQI 
Sbjct: 185 AGADKQYWKAISELIPHEIANIEKRGAKKDKDKEKKPGIVVIQGPKPGKPTDMSRMRQIL 244

Query: 251 LKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSS 291
           LKLKH  P HM+P PPP++ +  D       A  AA AS    +  S
Sbjct: 245 LKLKHTPPPHMKPPPPPAAATGKDGAAGKDGAKVAAAASKDASANGS 267

[Close]

BLAST of MS013939 vs. ExPASy Swiss-Prot
Match: Q7XKE9 (Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 PE=2 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.9e-50
Identity = 134/280 (47.86%), Postives = 179/280 (63.93%), Query Frame = 0


Query: 11  FDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRS--DNQGDDLLSSHQ--V 70
           F D  A   PR +S  F++  +   ++   +A D +   G+ S  D   +D+    +   
Sbjct: 5   FADDGADELPRTASHPFDADDDAAPDASGGAAADDTGYGGYASFVDGGVEDVEEEEEEIA 64

Query: 71  PETPSPPSNFSPSGGF--SAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPLREWR 130
            E+   P     SGGF  S FSP+      DGG    +GPIL  PA+M  EEG  LREWR
Sbjct: 65  VESEGVPIG-HVSGGFSPSPFSPDPE---LDGG----DGPILPPPAQMGAEEGILLREWR 124

Query: 131 RLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLANREK 190
           R NAI LEEKE++EKEL  +I+ EA+++K  FY +R    + NK  NR++EK ++A +EK
Sbjct: 125 RQNAIVLEEKERKEKELRAQILAEAEEFKKAFYEKRIQNCETNKVHNREREKIFVAGQEK 184

Query: 191 FHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHL 250
           FHAEADK YWK+I+ELIP+E+ TIE++GKKDK+KKP+I VIQGPKPGKPTDLSRMRQI +
Sbjct: 185 FHAEADKQYWKSISELIPHEIATIEKRGKKDKDKKPSITVIQGPKPGKPTDLSRMRQILV 244

Query: 251 KLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASST 285
           KLKH  P HM  +PPP+S +K D  +D +     A A+ T
Sbjct: 245 KLKHAPPPHMM-QPPPASAAK-DGAKDGAKDGTPAPANGT 274

[Close]

BLAST of MS013939 vs. ExPASy Swiss-Prot
Match: Q9SKU1 (Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1)

HSP 1 Score: 191.8 bits (486), Expect = 1.1e-47
Identity = 136/284 (47.89%), Postives = 161/284 (56.69%), Query Frame = 0


Query: 11  FDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDLLSSHQVPETP 70
           FDDG         S+  E F  ++  S A          G  S N GD    +       
Sbjct: 4   FDDGDFPAQTHSPSEH-EDFGGYDNFSEAQQPPTQHQSGGFSSFN-GDPASPNGYGFGAS 63

Query: 71  SPPSNFSPSGGFSAFSPEQNGKGFDG-GFEESEGPILSSPAEMEPEEGFPLREWRRLNAI 130
           SP  +FS     S      NG G  G     S+GPIL  P EM  EEGF  REWRRLN I
Sbjct: 64  SPNHDFSSPFESSVNDANGNGGGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRRLNTI 123

Query: 131 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLANREKFHAEA 190
            LEEKEK+EKE+  +II EA+ +K  FY +R   ++ NK  NR+KEK Y AN+EKFH E 
Sbjct: 124 HLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHKEV 183

Query: 191 DKNYWKAIAELIPNEVPTIEQK-GKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKH 250
           DK+YWKAIAELIP EVP IE+K GKKD +KKP++ VIQGPKPGKPTDL RMRQI LKLK 
Sbjct: 184 DKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLKT 243

Query: 251 NTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSS 293
           N P HM P PPP+ ++K D K       A  G       G   +
Sbjct: 244 NPPPHMMPPPPPAKDAK-DGKDAKDGKDAKTGKDGKDAKGGKDA 283

[Close]

BLAST of MS013939 vs. ExPASy TrEMBL
Match: A0A6J1DDM4 (Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1)

HSP 1 Score: 560.5 bits (1443), Expect = 4.3e-156
Identity = 295/296 (99.66%), Postives = 295/296 (99.66%), Query Frame = 0


Query: 1   MSTFAGAPPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDL 60
           MSTFAGAPPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDL
Sbjct: 1   MSTFAGAPPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDL 60

Query: 61  LSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPL 120
           LSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPL
Sbjct: 61  LSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPL 120

Query: 121 REWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLA 180
           REWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLA
Sbjct: 121 REWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLA 180

Query: 181 NREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMR 240
           NREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMR
Sbjct: 181 NREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMR 240

Query: 241 QIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK 297
           QIHLKLK NTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK
Sbjct: 241 QIHLKLKRNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSATPK 296

[Close]

BLAST of MS013939 vs. ExPASy TrEMBL
Match: A0A0A0KZX1 (Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1)

HSP 1 Score: 410.6 bits (1054), Expect = 5.5e-111
Identity = 227/295 (76.95%), Postives = 253/295 (85.76%), Query Frame = 0


Query: 1   MSTFAGAPP-PFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG PP PFDD T G++PRL+SQRFE+FS FEAE    SA DSSPIFG+   +QGD 
Sbjct: 1   MSTFAGTPPSPFDDATNGFEPRLASQRFETFSTFEAE----SADDSSPIFGNLPYDQGDG 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           +         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  V--------EPTPPTNFSAGGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEKRE ELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKREMELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAIVVIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQIHLKLKHNTPLHM+PKPPP +E K + K+DSS    AAGA+   GSGS++S T
Sbjct: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKAESKKDSS----AAGATLAAGSGSAASRT 278

[Close]

BLAST of MS013939 vs. ExPASy TrEMBL
Match: A0A5D3B8W6 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold78209G00900 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 9.4e-111
Identity = 225/295 (76.27%), Postives = 256/295 (86.78%), Query Frame = 0


Query: 1   MSTFAG-APPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG +PPPF+D T G++PRL+SQRFE+FS F+AE    SA DSSPIFG+   + GDD
Sbjct: 1   MSTFAGTSPPPFEDATIGFEPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           L         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  L--------PPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAI+VIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQIHLKLKHNTPLHM+PKPPP +E K++ K+DSS    AAGA+ T GSG ++S T
Sbjct: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKSESKKDSS----AAGATLTAGSGLAASRT 278

[Close]

BLAST of MS013939 vs. ExPASy TrEMBL
Match: A0A5A7TPG9 (Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G00190 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.2e-110
Identity = 225/295 (76.27%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MSTFAG-APPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG +PPPF+D T G+DPRL+SQRFE+FS F+AE    SA DSSPIFG+   + GDD
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           L         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  L--------PPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAI+VIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQIHLKLKHNTPLHM+PKPPP +E K++ K+DSS    AAGA+   GSG ++S T
Sbjct: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKSESKKDSS----AAGATLAAGSGLAASRT 278

[Close]

BLAST of MS013939 vs. ExPASy TrEMBL
Match: A0A1S3BLP9 (Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1)

HSP 1 Score: 409.5 bits (1051), Expect = 1.2e-110
Identity = 225/295 (76.27%), Postives = 255/295 (86.44%), Query Frame = 0


Query: 1   MSTFAG-APPPFDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDD 60
           MSTFAG +PPPF+D T G+DPRL+SQRFE+FS F+AE    SA DSSPIFG+   + GDD
Sbjct: 1   MSTFAGTSPPPFEDATIGFDPRLASQRFETFSTFQAE----SADDSSPIFGNLPYDLGDD 60

Query: 61  LLSSHQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFP 120
           L         P+PP+NFS  GGFS+FS +QNGKGFDGGF ES+GPILSSP  MEPEEGFP
Sbjct: 61  L--------PPTPPTNFSAVGGFSSFSSQQNGKGFDGGFGESDGPILSSPTAMEPEEGFP 120

Query: 121 LREWRRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYL 180
           LREWRRLNAIRLEEKEK+EKELL+EIIDEADQYKI+FYRRRKLALD++KA+NRDKEKQYL
Sbjct: 121 LREWRRLNAIRLEEKEKKEKELLEEIIDEADQYKIEFYRRRKLALDHSKATNRDKEKQYL 180

Query: 181 ANREKFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRM 240
           AN+EKFHAEADKNYWKAIAELIPNEVPTIEQ+GKKDKEKKPAI+VIQGPKPGKPTDLSRM
Sbjct: 181 ANQEKFHAEADKNYWKAIAELIPNEVPTIEQRGKKDKEKKPAIIVIQGPKPGKPTDLSRM 240

Query: 241 RQIHLKLKHNTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSSAT 295
           RQIHLKLKHNTPLHM+PKPPP +E K++ K+DSS    AAGA+   GSG ++S T
Sbjct: 241 RQIHLKLKHNTPLHMKPKPPP-AEPKSESKKDSS----AAGATLAAGSGLAASRT 278

[Close]

BLAST of MS013939 vs. TAIR 10
Match: AT2G40060.1 (Clathrin light chain protein )

HSP 1 Score: 219.5 bits (558), Expect = 3.5e-57
Identity = 130/246 (52.85%), Postives = 169/246 (68.70%), Query Frame = 0


Query: 31  SNFEAES---IADSAGDSSPIFGHRSDNQGDDLLSSHQVPETPSPPSNFSPSGGFSAFSP 90
           S FE +S   + D A +S P+ G                 E        +PS  + A+S 
Sbjct: 2   SAFEDDSFVILNDDASESVPVSGSFDATDSFSAFDGSLQVEDSVDDVFAAPSSDYGAYS- 61

Query: 91  EQNGKGFDGGFEESEGPILSSPAEMEPEEGFPLREWRRLNAIRLEEKEKREKELLQEIID 150
             NG G  G   + +GPIL  P+EME +EGF LREWRR NAI+LEEKEKREKELL++II+
Sbjct: 62  --NGDGIFGSNGDHDGPILPPPSEMESDEGFALREWRRQNAIQLEEKEKREKELLKQIIE 121

Query: 151 EADQYKIDFYRRRKLALDNNKASNRDKEKQYLANREKFHAEADKNYWKAIAELIPNEVPT 210
           EADQYK +F+++ ++  +NNKA+NR+KEK YL N+EKF+AE+ KNYWKAIAEL+P EVPT
Sbjct: 122 EADQYKEEFHKKIEVTCENNKAANREKEKLYLENQEKFYAESSKNYWKAIAELVPKEVPT 181

Query: 211 IE-QKGKKDKE--KKPAIVVIQGPKPGKPTDLSRMRQIHLKLKHNTPLHMR-PKPPPSSE 270
           IE ++GKK+++  KKP + VIQGPKPGKPTDL+RMRQI +KLKHN P H++    PPS E
Sbjct: 182 IEKRRGKKEQQDPKKPTVSVIQGPKPGKPTDLTRMRQILVKLKHNPPSHLKLTSQPPSEE 241

[Close]

BLAST of MS013939 vs. TAIR 10
Match: AT3G51890.1 (Clathrin light chain protein )

HSP 1 Score: 218.0 bits (554), Expect = 1.0e-56
Identity = 136/265 (51.32%), Postives = 167/265 (63.02%), Query Frame = 0


Query: 12  DDGTAG----YDPRLSSQRFE-SFSNFEAESIADS---AGDSSPIFGHRSDNQGDDLLSS 71
           D G  G    Y+ R  SQRF+ SFSNF+++   +S    GDSSP                
Sbjct: 22  DGGDGGNFTAYESRFQSQRFDSSFSNFDSQPEKESDLPCGDSSP---------------- 81

Query: 72  HQVPETPSPPSNFSPSGGFSAFSPEQNGKGFDGGFEESEGPILSSPAEMEPEEGFPLREW 131
              PET SPPS  S                    F+++   IL  P+ ME EEGF LREW
Sbjct: 82  --RPETQSPPSINS--------------------FDDTNDSILPPPSAMEKEEGFALREW 141

Query: 132 RRLNAIRLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLANRE 191
           RRLNA+RLEEKEK EKE++Q+I++ A+QYK +FY +R + ++NNK  NR+KEK +L N+E
Sbjct: 142 RRLNALRLEEKEKEEKEMVQQILEAAEQYKAEFYSKRNVTIENNKKLNREKEKFFLENQE 201

Query: 192 KFHAEADKNYWKAIAELIPNEVPTIEQKGKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIH 251
           KF+AEADKN WKAIAELIP EVP IE +G  +K+K   I VIQGPKPGKPTDLSRMRQ+ 
Sbjct: 202 KFYAEADKNNWKAIAELIPREVPVIENRG--NKKKTATITVIQGPKPGKPTDLSRMRQVL 244

Query: 252 LKLKHNTPLHMRPKPPPSSESKTDP 269
            KLKHN P HM+PK P  S S  DP
Sbjct: 262 TKLKHNPPTHMKPKLP--SPSGADP 244

[Close]

BLAST of MS013939 vs. TAIR 10
Match: AT2G20760.1 (Clathrin light chain protein )

HSP 1 Score: 191.8 bits (486), Expect = 7.8e-49
Identity = 136/284 (47.89%), Postives = 161/284 (56.69%), Query Frame = 0


Query: 11  FDDGTAGYDPRLSSQRFESFSNFEAESIADSAGDSSPIFGHRSDNQGDDLLSSHQVPETP 70
           FDDG         S+  E F  ++  S A          G  S N GD    +       
Sbjct: 4   FDDGDFPAQTHSPSEH-EDFGGYDNFSEAQQPPTQHQSGGFSSFN-GDPASPNGYGFGAS 63

Query: 71  SPPSNFSPSGGFSAFSPEQNGKGFDG-GFEESEGPILSSPAEMEPEEGFPLREWRRLNAI 130
           SP  +FS     S      NG G  G     S+GPIL  P EM  EEGF  REWRRLN I
Sbjct: 64  SPNHDFSSPFESSVNDANGNGGGSGGDAIFASDGPILPDPNEMR-EEGFQRREWRRLNTI 123

Query: 131 RLEEKEKREKELLQEIIDEADQYKIDFYRRRKLALDNNKASNRDKEKQYLANREKFHAEA 190
            LEEKEK+EKE+  +II EA+ +K  FY +R   ++ NK  NR+KEK Y AN+EKFH E 
Sbjct: 124 HLEEKEKKEKEMRNQIITEAEDFKKAFYEKRDKTIETNKTDNREKEKLYWANQEKFHKEV 183

Query: 191 DKNYWKAIAELIPNEVPTIEQK-GKKDKEKKPAIVVIQGPKPGKPTDLSRMRQIHLKLKH 250
           DK+YWKAIAELIP EVP IE+K GKKD +KKP++ VIQGPKPGKPTDL RMRQI LKLK 
Sbjct: 184 DKHYWKAIAELIPREVPNIEKKRGKKDPDKKPSVNVIQGPKPGKPTDLGRMRQIFLKLKT 243

Query: 251 NTPLHMRPKPPPSSESKTDPKRDSSSAAAAAGASSTTGSGSSSS 293
           N P HM P PPP+ ++K D K       A  G       G   +
Sbjct: 244 NPPPHMMPPPPPAKDAK-DGKDAKDGKDAKTGKDGKDAKGGKDA 283

The following BLAST results are available for this feature:

BLAST of MS013939 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022151477.1	8.9e-156	99.66	clathrin light chain 2-like [Momordica charantia]	[more]
XP_038882671.1	5.3e-116	78.45	clathrin light chain 2-like [Benincasa hispida] >XP_038882672.1 clathrin light c...	[more]
XP_004147885.1	1.1e-110	76.95	clathrin light chain 2 [Cucumis sativus] >KGN54369.1 hypothetical protein Csa_01...	[more]
TYJ96292.1	1.9e-110	76.27	clathrin light chain 2-like [Cucumis melo var. makuwa]	[more]
XP_008449287.1	2.5e-110	76.27	PREDICTED: clathrin light chain 2-like [Cucumis melo] >KAA0045034.1 clathrin lig...	[more]

BLAST of MS013939 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O04209	4.9e-56	52.85	Clathrin light chain 2 OS=Arabidopsis thaliana OX=3702 GN=CLC2 PE=1 SV=1	[more]
F4J5M9	1.4e-55	51.32	Clathrin light chain 3 OS=Arabidopsis thaliana OX=3702 GN=At3g51890 PE=1 SV=1	[more]
Q5Z402	5.2e-50	47.04	Clathrin light chain 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0731800 ...	[more]
Q7XKE9	8.9e-50	47.86	Clathrin light chain 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0679100 ...	[more]
Q9SKU1	1.1e-47	47.89	Clathrin light chain 1 OS=Arabidopsis thaliana OX=3702 GN=At2g20760 PE=2 SV=1	[more]

BLAST of MS013939 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDM4	4.3e-156	99.66	Clathrin light chain OS=Momordica charantia OX=3673 GN=LOC111019409 PE=3 SV=1	[more]
A0A0A0KZX1	5.5e-111	76.95	Clathrin light chain OS=Cucumis sativus OX=3659 GN=Csa_4G308590 PE=3 SV=1	[more]
A0A5D3B8W6	9.4e-111	76.27	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold782...	[more]
A0A5A7TPG9	1.2e-110	76.27	Clathrin light chain OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold30G...	[more]
A0A1S3BLP9	1.2e-110	76.27	Clathrin light chain OS=Cucumis melo OX=3656 GN=LOC103491206 PE=3 SV=1	[more]

BLAST of MS013939 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G40060.1	3.5e-57	52.85	Clathrin light chain protein	[more]
AT3G51890.1	1.0e-56	51.32	Clathrin light chain protein	[more]
AT2G20760.1	7.8e-49	47.89	Clathrin light chain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 128..151
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 276..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 59..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 204..296
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 208..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..117
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..39
None	No IPR available	PANTHER	PTHR10639:SF24	CLATHRIN LIGHT CHAIN 3	coord: 10..286
IPR000996	Clathrin light chain	PFAM	PF01086	Clathrin_lg_ch	coord: 28..218 e-value: 1.2E-15 score: 58.2
IPR000996	Clathrin light chain	PANTHER	PTHR10639	CLATHRIN LIGHT CHAIN	coord: 10..286

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013939.1	MS013939.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030132	clathrin coat of coated pit
cellular_component	GO:0030130	clathrin coat of trans-Golgi network vesicle
molecular_function	GO:0005198	structural molecule activity