MS013862 (gene) Bitter gourd (TR) v1

Overview


Name	MS013862
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Non-specific lipid-transfer protein
Location	scaffold607: 353601 .. 353951 (-)
RNA-Seq Expression	MS013862
Synteny	MS013862

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGCGGCTCCGTGAAGCTTAGTTTGGCAGCAGCGCTTCTTTGCATTGTGATCGGTGCAAAGGTGGCTGAAGCGGCTATGTCGTGCAACCAAGTGGTCAGCGACTTGGCTCCATGTGTGTCGTTTGTGACCAGCGGCGGAACTCCGTCGATGATTTGCTGCAATGGCGTGAGGACCCTAAACAGTCAGGCTCAGACGACAGCCGACCGACAGGGGGCGTGTCAATGCTTGAAATCGGTCATCGCTGGAGTCTCGTATAATCCCAGCAATGTTGCTAATGCTGCTGCTCTTCCGGCACGCTGTGGCGTTAATTTTCCATACAAGATTAGCCCTAGTATTGATTGCATG

mRNA sequence

ATGGCGAGCGGCTCCGTGAAGCTTAGTTTGGCAGCAGCGCTTCTTTGCATTGTGATCGGTGCAAAGGTGGCTGAAGCGGCTATGTCGTGCAACCAAGTGGTCAGCGACTTGGCTCCATGTGTGTCGTTTGTGACCAGCGGCGGAACTCCGTCGATGATTTGCTGCAATGGCGTGAGGACCCTAAACAGTCAGGCTCAGACGACAGCCGACCGACAGGGGGCGTGTCAATGCTTGAAATCGGTCATCGCTGGAGTCTCGTATAATCCCAGCAATGTTGCTAATGCTGCTGCTCTTCCGGCACGCTGTGGCGTTAATTTTCCATACAAGATTAGCCCTAGTATTGATTGCATG

Coding sequence (CDS)

ATGGCGAGCGGCTCCGTGAAGCTTAGTTTGGCAGCAGCGCTTCTTTGCATTGTGATCGGTGCAAAGGTGGCTGAAGCGGCTATGTCGTGCAACCAAGTGGTCAGCGACTTGGCTCCATGTGTGTCGTTTGTGACCAGCGGCGGAACTCCGTCGATGATTTGCTGCAATGGCGTGAGGACCCTAAACAGTCAGGCTCAGACGACAGCCGACCGACAGGGGGCGTGTCAATGCTTGAAATCGGTCATCGCTGGAGTCTCGTATAATCCCAGCAATGTTGCTAATGCTGCTGCTCTTCCGGCACGCTGTGGCGTTAATTTTCCATACAAGATTAGCCCTAGTATTGATTGCATG

Protein sequence

MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDCM

Homology

[Close]

BLAST of MS013862 vs. NCBI nr
Match: XP_022144080.1 (non-specific lipid-transfer protein 1-like [Momordica charantia])

HSP 1 Score: 220.7 bits (561), Expect = 6.6e-54
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRT 60
           MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRT
Sbjct: 1   MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRT 60

Query: 61  LNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           LNSQAQTTADRQGACQCLKSVI  VSYNPSNVANAAALPARCGVNFPYKISPSIDC
Sbjct: 61  LNSQAQTTADRQGACQCLKSVIVRVSYNPSNVANAAALPARCGVNFPYKISPSIDC 116

[Close]

BLAST of MS013862 vs. NCBI nr
Match: XP_023521379.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 144.8 bits (364), Expect = 4.6e-31
Identity = 71/113 (62.83%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 5   SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNS 64
           +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN 
Sbjct: 8   NVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGTPSATCCSGVQDLNK 67

Query: 65  QAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
            A T ADRQ  C CL+S++ GVSYN   +ANAAALPARCGV  PYKI P IDC
Sbjct: 68  LASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPARCGVKLPYKIDPRIDC 120

[Close]

BLAST of MS013862 vs. NCBI nr
Match: XP_022966484.1 (non-specific lipid-transfer protein 1-like [Cucurbita maxima])

HSP 1 Score: 142.9 bits (359), Expect = 1.8e-30
Identity = 70/113 (61.95%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNS 64
           +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GG PS  CC+GV+ LN 
Sbjct: 8   NVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGAPSATCCSGVQDLNK 67

Query: 65  QAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
            A T ADRQ  C CL+S++ GVSYN   +ANAAALPARCGV  PYKI P IDC
Sbjct: 68  LASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPARCGVKLPYKIDPRIDC 120

[Close]

BLAST of MS013862 vs. NCBI nr
Match: XP_023518220.1 (non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 142.5 bits (358), Expect = 2.3e-30
Identity = 69/113 (61.06%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 5   SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNS 64
           +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN 
Sbjct: 8   NVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGTPSATCCSGVQDLNK 67

Query: 65  QAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
            A T ADRQ  C CL+S++ GVSYN   +ANAAALP++CGV  PYKI P IDC
Sbjct: 68  LASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPSKCGVKLPYKIDPRIDC 120

[Close]

BLAST of MS013862 vs. NCBI nr
Match: XP_022925226.1 (non-specific lipid-transfer protein 1-like [Cucurbita moschata])

HSP 1 Score: 141.7 bits (356), Expect = 3.9e-30
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNS 64
           +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN 
Sbjct: 8   NVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGTPSATCCSGVQDLNK 67

Query: 65  QAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
            A T ADRQ  C CL+S++ GVSYN   +ANAAALPA+CGV  PYKI P  DC
Sbjct: 68  LASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPAKCGVKLPYKIDPRTDC 120

[Close]

BLAST of MS013862 vs. ExPASy Swiss-Prot
Match: Q9LDB4 (Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana OX=3702 GN=LTP6 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.2e-28
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 15  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGA 74
           +C+V+     EAA+SCN V++DL PC+S+VT GG    +CCNG+ TL SQAQT+ DRQG 
Sbjct: 8   VCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGV 67

Query: 75  CQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           C+C+KS I G++ +P  + NA  LP++CGV+ PYK SPS DC
Sbjct: 68  CRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDC 109

[Close]

BLAST of MS013862 vs. ExPASy Swiss-Prot
Match: Q43019 (Non-specific lipid-transfer protein 3 OS=Prunus dulcis OX=3755 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 7.2e-27
Identity = 57/107 (53.27%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  LAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTA 69
           L A + C+ +G   A AA+SC QVV++L PC+++V +GG  +  CC GVR+L S AQTTA
Sbjct: 13  LVAVMCCMAVGGPKAMAAVSCGQVVNNLTPCINYVANGGALNPSCCTGVRSLYSLAQTTA 72

Query: 70  DRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           DRQ  C CLK  + G+ Y  +N   AA LP +CGVN PYKISPS DC
Sbjct: 73  DRQSICNCLKQAVNGIPYTNANAGLAAGLPGKCGVNIPYKISPSTDC 119

[Close]

BLAST of MS013862 vs. ExPASy Swiss-Prot
Match: Q39950 (Non-specific lipid-transfer protein OS=Helianthus annuus OX=4232 PE=3 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 2.5e-24
Identity = 58/107 (54.21%), Postives = 73/107 (68.22%), Query Frame = 0


Query: 10  LAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTA 69
           L A + C+V+GA   E A+SC QV S LAPC+S++T GG     CC+GV++LNS A+TT 
Sbjct: 9   LCAGVTCMVVGAPYTE-ALSCGQVSSSLAPCISYLTKGGAVPPACCSGVKSLNSAAKTTP 68

Query: 70  DRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           DRQ AC CLKS    +S    N  NAA+ P +CGV+ PYKISPS DC
Sbjct: 69  DRQAACGCLKSAYNSIS--GVNAGNAASFPGKCGVSIPYKISPSTDC 112

[Close]

BLAST of MS013862 vs. ExPASy Swiss-Prot
Match: Q9M5X8 (Non-specific lipid-transfer protein OS=Prunus avium OX=42229 PE=1 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 4.3e-24
Identity = 60/114 (52.63%), Postives = 78/114 (68.42%), Query Frame = 0


Query: 3   SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLN 62
           S   KL+L  A LC+V+   +A+ A++C QV S+LAPC+++V  GG     CCNG+R +N
Sbjct: 4   SAMTKLALVVA-LCMVVSVPIAQ-ALTCGQVSSNLAPCIAYVRGGGAVPPACCNGIRNIN 63

Query: 63  SQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           + A+TTADRQ AC CLK + A V     N  NAAALP +CGVN PYKISPS +C
Sbjct: 64  NLAKTTADRQTACNCLKQLSASVP--GVNANNAAALPGKCGVNVPYKISPSTNC 113

[Close]

BLAST of MS013862 vs. ExPASy Swiss-Prot
Match: Q43017 (Non-specific lipid-transfer protein 1 OS=Prunus dulcis OX=3755 PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 3.7e-23
Identity = 59/115 (51.30%), Postives = 78/115 (67.83%), Query Frame = 0


Query: 3   SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLN 62
           S   KL+L  A LC+V+   +A+ A++C QV S+LAPC+ +V  GG     CCNG+R +N
Sbjct: 4   SAMTKLALVVA-LCMVVSVPIAQ-AITCGQVSSNLAPCIPYVRGGGAVPPACCNGIRNVN 63

Query: 63  SQAQTTADRQGACQCLKSVIAGV-SYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           + A+TT DRQ AC CLK + A V   NP+   NAAALP +CGVN PY+ISPS +C
Sbjct: 64  NLARTTPDRQAACNCLKQLSASVPGVNPN---NAAALPGKCGVNIPYQISPSTNC 113

[Close]

BLAST of MS013862 vs. ExPASy TrEMBL
Match: A0A6J1CQM5 (Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC111013857 PE=3 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 3.2e-54
Identity = 114/116 (98.28%), Postives = 114/116 (98.28%), Query Frame = 0


Query: 1   MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRT 60
           MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRT
Sbjct: 1   MASGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRT 60

Query: 61  LNSQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           LNSQAQTTADRQGACQCLKSVI  VSYNPSNVANAAALPARCGVNFPYKISPSIDC
Sbjct: 61  LNSQAQTTADRQGACQCLKSVIVRVSYNPSNVANAAALPARCGVNFPYKISPSIDC 116

[Close]

BLAST of MS013862 vs. ExPASy TrEMBL
Match: A0A6J1HTX7 (Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111466126 PE=3 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 8.5e-31
Identity = 70/113 (61.95%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNS 64
           +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GG PS  CC+GV+ LN 
Sbjct: 8   NVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGAPSATCCSGVQDLNK 67

Query: 65  QAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
            A T ADRQ  C CL+S++ GVSYN   +ANAAALPARCGV  PYKI P IDC
Sbjct: 68  LASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPARCGVKLPYKIDPRIDC 120

[Close]

BLAST of MS013862 vs. ExPASy TrEMBL
Match: A0A6J1EBM4 (Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC111432531 PE=3 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.9e-30
Identity = 69/113 (61.06%), Postives = 86/113 (76.11%), Query Frame = 0


Query: 5   SVKLSLAAALLC-IVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNS 64
           +VK+ L  AL+C I++G +V+EAA++CNQVVSDL  CVS+VT GGTPS  CC+GV+ LN 
Sbjct: 8   NVKMGLVVALVCGIIMGGRVSEAAVTCNQVVSDLGACVSYVTGGGTPSATCCSGVQDLNK 67

Query: 65  QAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
            A T ADRQ  C CL+S++ GVSYN   +ANAAALPA+CGV  PYKI P  DC
Sbjct: 68  LASTAADRQAVCGCLESLVKGVSYNAQTLANAAALPAKCGVKLPYKIDPRTDC 120

[Close]

BLAST of MS013862 vs. ExPASy TrEMBL
Match: A0A5D3CEZ6 (Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold127G00580 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 9.4e-30
Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 6   VKLSLAAALLCIVIGAKV-AEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQ 65
           +KL L   LL  VIG  V  EA ++CNQVVS+L+PC+S+VT GG+PS  CC+GVR LN  
Sbjct: 9   LKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKA 68

Query: 66  AQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           AQTT DRQ  C+CLKS+I GV+YN  NVANAAALP +CGVN PY I+P+ DC
Sbjct: 69  AQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120

[Close]

BLAST of MS013862 vs. ExPASy TrEMBL
Match: A0A1S3CIS8 (Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103501462 PE=3 SV=1)

HSP 1 Score: 139.4 bits (350), Expect = 9.4e-30
Identity = 70/112 (62.50%), Postives = 85/112 (75.89%), Query Frame = 0


Query: 6   VKLSLAAALLCIVIGAKV-AEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQ 65
           +KL L   LL  VIG  V  EA ++CNQVVS+L+PC+S+VT GG+PS  CC+GVR LN  
Sbjct: 9   LKLGLTVTLLYAVIGGGVTTEATVTCNQVVSNLSPCISYVTGGGSPSFNCCSGVRQLNKA 68

Query: 66  AQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           AQTT DRQ  C+CLKS+I GV+YN  NVANAAALP +CGVN PY I+P+ DC
Sbjct: 69  AQTTPDRQDVCRCLKSLINGVTYNGQNVANAAALPTKCGVNLPYTINPNADC 120

[Close]

BLAST of MS013862 vs. TAIR 10
Match: AT3G08770.1 (lipid transfer protein 6 )

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-29
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 15  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGA 74
           +C+V+     EAA+SCN V++DL PC+S+VT GG    +CCNG+ TL SQAQT+ DRQG 
Sbjct: 8   VCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGV 67

Query: 75  CQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           C+C+KS I G++ +P  + NA  LP++CGV+ PYK SPS DC
Sbjct: 68  CRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDC 109

[Close]

BLAST of MS013862 vs. TAIR 10
Match: AT3G08770.2 (lipid transfer protein 6 )

HSP 1 Score: 126.3 bits (316), Expect = 1.6e-29
Identity = 55/102 (53.92%), Postives = 75/102 (73.53%), Query Frame = 0


Query: 15  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGA 74
           +C+V+     EAA+SCN V++DL PC+S+VT GG    +CCNG+ TL SQAQT+ DRQG 
Sbjct: 8   VCLVLALHCGEAAVSCNTVIADLYPCLSYVTQGGPVPTLCCNGLTTLKSQAQTSVDRQGV 67

Query: 75  CQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           C+C+KS I G++ +P  + NA  LP++CGV+ PYK SPS DC
Sbjct: 68  CRCIKSAIGGLTLSPRTIQNALELPSKCGVDLPYKFSPSTDC 109

[Close]

BLAST of MS013862 vs. TAIR 10
Match: AT5G01870.1 (Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein )

HSP 1 Score: 104.8 bits (260), Expect = 4.9e-23
Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 6   VKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQA 65
           +++ L   LL   I A  +EAA+SCN V ++L PCV +V  GG     CCNG+R L+ QA
Sbjct: 2   MRVVLPLCLLLASIFAWGSEAAISCNAVQANLYPCVVYVVQGGAIPYSCCNGIRMLSKQA 61

Query: 66  QTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
            + +D+QG C+C+KSV+  VSY+   +  AAALP +CGV  PYKI PS +C
Sbjct: 62  TSASDKQGVCRCIKSVVGRVSYSSIYLKKAAALPGKCGVKLPYKIDPSTNC 112

[Close]

BLAST of MS013862 vs. TAIR 10
Match: AT2G38540.1 (lipid transfer protein 1 )

HSP 1 Score: 90.1 bits (222), Expect = 1.3e-18
Identity = 49/114 (42.98%), Postives = 66/114 (57.89%), Query Frame = 0


Query: 3   SGSVKLSLAAALLCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLN 62
           +G +KL+       IV G   + AA+SC  V S+LA C+ +V  GG     CC+GV+ LN
Sbjct: 2   AGVMKLACLLLACMIVAGPITSNAALSCGSVNSNLAACIGYVLQGGVIPPACCSGVKNLN 61

Query: 63  SQAQTTADRQGACQCLKSVIAGVSYNPSNVANAAALPARCGVNFPYKISPSIDC 117
           S A+TT DRQ AC C++     +  +  N   AA +P  CGVN PYKIS S +C
Sbjct: 62  SIAKTTPDRQQACNCIQGAARALG-SGLNAGRAAGIPKACGVNIPYKISTSTNC 114

[Close]

BLAST of MS013862 vs. TAIR 10
Match: AT5G59320.1 (lipid transfer protein 3 )

HSP 1 Score: 89.0 bits (219), Expect = 2.8e-18
Identity = 48/103 (46.60%), Postives = 65/103 (63.11%), Query Frame = 0


Query: 15  LCIVIGAKVAEAAMSCNQVVSDLAPCVSFVTSGGTPSMICCNGVRTLNSQAQTTADRQGA 74
           +CIV      +AA+SC  V   LAPC ++++ GG     CC GV+TLNS A+TT DRQ A
Sbjct: 15  VCIVAS---VDAAISCGTVAGSLAPCATYLSKGGLVPPSCCAGVKTLNSMAKTTPDRQQA 74

Query: 75  CQCLKSVIAGVS-YNPSNVANAAALPARCGVNFPYKISPSIDC 117
           C+C++S    +S  NPS    A+ LP +CGV+ PY IS S +C
Sbjct: 75  CRCIQSTAKSISGLNPS---LASGLPGKCGVSIPYPISMSTNC 111

The following BLAST results are available for this feature:

BLAST of MS013862 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144080.1	6.6e-54	98.28	non-specific lipid-transfer protein 1-like [Momordica charantia]	[more]
XP_023521379.1	4.6e-31	62.83	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022966484.1	1.8e-30	61.95	non-specific lipid-transfer protein 1-like [Cucurbita maxima]	[more]
XP_023518220.1	2.3e-30	61.06	non-specific lipid-transfer protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022925226.1	3.9e-30	61.06	non-specific lipid-transfer protein 1-like [Cucurbita moschata]	[more]

BLAST of MS013862 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LDB4	2.2e-28	53.92	Non-specific lipid-transfer protein 6 OS=Arabidopsis thaliana OX=3702 GN=LTP6 PE...	[more]
Q43019	7.2e-27	53.27	Non-specific lipid-transfer protein 3 OS=Prunus dulcis OX=3755 PE=2 SV=1	[more]
Q39950	2.5e-24	54.21	Non-specific lipid-transfer protein OS=Helianthus annuus OX=4232 PE=3 SV=1	[more]
Q9M5X8	4.3e-24	52.63	Non-specific lipid-transfer protein OS=Prunus avium OX=42229 PE=1 SV=1	[more]
Q43017	3.7e-23	51.30	Non-specific lipid-transfer protein 1 OS=Prunus dulcis OX=3755 PE=3 SV=1	[more]

BLAST of MS013862 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CQM5	3.2e-54	98.28	Non-specific lipid-transfer protein OS=Momordica charantia OX=3673 GN=LOC1110138...	[more]
A0A6J1HTX7	8.5e-31	61.95	Non-specific lipid-transfer protein OS=Cucurbita maxima OX=3661 GN=LOC111466126 ...	[more]
A0A6J1EBM4	1.9e-30	61.06	Non-specific lipid-transfer protein OS=Cucurbita moschata OX=3662 GN=LOC11143253...	[more]
A0A5D3CEZ6	9.4e-30	62.50	Non-specific lipid-transfer protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3CIS8	9.4e-30	62.50	Non-specific lipid-transfer protein OS=Cucumis melo OX=3656 GN=LOC103501462 PE=3...	[more]

BLAST of MS013862 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G08770.1	1.6e-29	53.92	lipid transfer protein 6	[more]
AT3G08770.2	1.6e-29	53.92	lipid transfer protein 6	[more]
AT5G01870.1	4.9e-23	47.75	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamil...	[more]
AT2G38540.1	1.3e-18	42.98	lipid transfer protein 1	[more]
AT5G59320.1	2.8e-18	46.60	lipid transfer protein 3	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PRINTS	PR00382	LIPIDTRNSFER	coord: 49..63 score: 45.95 coord: 107..117 score: 53.46 coord: 70..85 score: 46.83 coord: 89..106 score: 41.11 coord: 29..45 score: 45.34
IPR000528	Plant non-specific lipid-transfer protein/Par allergen	PANTHER	PTHR33076	FAMILY NOT NAMED	coord: 8..116
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	SMART	SM00499	aai_6	coord: 30..116 e-value: 1.6E-14 score: 64.2
IPR016140	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain	PFAM	PF00234	Tryp_alpha_amyl	coord: 30..116 e-value: 1.0E-8 score: 35.5
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	GENE3D	1.10.110.10		coord: 28..117 e-value: 6.6E-29 score: 102.1
IPR036312	Bifunctional inhibitor/plant lipid transfer protein/seed storage helical domain superfamily	SUPERFAMILY	47699	Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin	coord: 27..116
None	No IPR available	PANTHER	PTHR33076:SF50	NON-SPECIFIC LIPID-TRANSFER PROTEIN 10-RELATED	coord: 8..116
None	No IPR available	CDD	cd01960	nsLTP1	coord: 29..116 e-value: 1.70512E-32 score: 107.436

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013862.1	MS013862.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006869	lipid transport
molecular_function	GO:0008289	lipid binding