MS013842 (gene) Bitter gourd (TR) v1

Overview


Name	MS013842
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-type domain-containing protein
Location	scaffold607: 181384 .. 187766 (-)
RNA-Seq Expression	MS013842
Synteny	MS013842

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGCGTCTGGTAGCGACCCCGACGCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTGGCTGCCTCGAACATAATTCAGGCTCCTCTTTCTGCGTTGTTGGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAATCTGAGGCATTGATAAGTGCACGGTTGCCTTCGGGGTTTCGTGACCATATTCGCAGCCAGATTGAAGAATCTTCTGGTTCCACCAACGACGGAGAGGTTTCAATTAGGATCATTGGGGCGGGGGAACAAGAACATGGTAGGGATGGTGCTGGATTAGTTGTGGGGCAGGCGAGGGAAGTAGGCGGTCAGAATGCTGTATCGTCACAATCTGTTTCGGGGTTGGCATCAGAGCTTAGCCAGGGAGATCCTGCTCCTGAACGTGGGGCAAGAGAAGGCATTCCTCAACCAATAAACGGAGGTGCTGATGGAGATGCCTTGGAGGCGGCTGGGGGAAATGGCAGGGATTCTTCTTACCAAAGATATGATATTCAGCAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGTACCTTCCTTGAATTTTATCAAGATTTTAACTCACTGTGTGTTACAGAATTTTTATGAACTTCGTATTTTAAAATTGTCATTGATGATGTGGCTGGATTATGGACACTAGCCAGAAAGATTTAGATAATCATGAACTGCTGCATCTTCTTTCTGGAGCAAGCAAACACACTATTTTATCTTCGTTATTGTTCTTGTTCTTCTTCTCCATCCTTGATGGCTGATTGAAATTCTCAAGTTACACGGAAGTAAAGTGAATCTTATTTTCTTTTCTTACAAAATTTGAATTCTTTATATTAATATTGTTAAAGAAGACGTGAAATTAGTTAATTTAAGATTTCCTTAATGCATCTAAATAAGAAAAAAAAAGGGTCAACTTGGTAAAATACTTATCCAATATATAATCAATGCTGTATTAACATAAGCAATAGTTCAACTTGCCACAGTCAATCAACAATTAACCTTGAATTTTAATTGAACTCTTTGAACTTTTGTAGTACAGGAAGTTAGAAATACCAAATGGACAAATCAATTAATAATTATAATTGATTTTTTTTAAATGTCAAGCTCGTGTCATAGTCTTGATGCTGCTTATAGCTTAACGTTTGCTTGGTTTCATGCATATTTATGTCATTATGTGTGTCTGTGTATATATATGGTAACTCAGATGAACTTAACATCACTTATATCAAACACATCAAATTTATATTCACAGTGATCACAACATGCAAAAATTTTTCTTTTGATAAGATACCTCAACTTGTAAAATCTTAGATGAAGGTTTCTTGTGTAAAGGTAGTTTAGATGAAGAACAATAAATATGTGAAAGGTATTAAATTGTAAGTTTAATTTTGAATTTATATAGAAAGGAAGGGAAAGAAGTGGAATCATAAGTTTGTCATCTTTTACCCTTATTTAAGATATACAATTGATTATAGATTATAGATATGAGAAAATTTAAGAACACTCTTATTATTTTGTTATGACATTTAGAAAACGACAATGGAGCAGCTCAAATCTGTTTTTAAGTGTGTTTGTTATATGTGTTTTCACATGTATCTCTGCAATTTTTTTGTCTCGTTCTGGTGTTGATATTGCCTCCTAAAATTACTTGCAGGCTTCTTTGTGACAATTTGGATAGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGTGTGTTATGACATGTAATAATGTTGTTTTTGTCTTTCTTTGGGGTGGGGGGTTATAACAGACCTTTTTACTAAAAATTAAGAACAGTAGAAGTAAAGAAGGTTAGAAGTCTTGTCTTCTCACCAAAGGTGATCACAAGAAGAAGGTTTGCATATTATAGAGGCTACAAATAGTTTCTCCTATTAAGCATAGCATACCACATGAAGTCTTAAGAACTGAGTATCTCAAGCTAAACTCTCACCCAAAGCCCCAAGCAAGGTCTGCTGCCCCTTACGGGTACGGGGCAAAGAATACCTTTTCTTCTTCTTCTTCTTTTATAATAATCCAAACCCCTAAAGCCATAATCAACTTTTGTGGATTTTTCTCTTACCACAAACACCATAAGAAAGTATAGCACGCATGCAACCATAAAATTTTCCTTTTCTCTTAAAATTGAAATCAAACAGGAATTAAGTTTTAAGAAAGTGAAACAGTGCCCCCTCCCCTCCTCCCCCCTCATTATTATGTTTTCAAACACCTCAGTTGTATGTGGTAGTTACCAAACTCATTCGATGAAAATCCTTCTGTGGATTGGCATCAATCTTGCTGTATTGTTTCTGTTTTTTTTGTTACAAATTTTTATATAAATTAATTGTAAGCCTTATTGGTGCCTGCAGGGAGAGAGAAAAATCTCTGTTTTGGTTGGAATTTCTCTTGCATTCACTATTCATGTTATTGGTGTGTATTGGTGGTATCAGAATGATGATCTTTTATATCCACTGATCATGCTTCCTCCCAGAGCGATACCTCCTTTCTGGCATGCTATTTTCATCATCATGGTGAATGGTAATCTTCTGTTTGAGTTATTACTGTATCTCACTGATTATACTGTATATGCTGTATTATAACGAAGAAGTGTTTAATATGACAGGCAGTAGGCTGCCTTGTCACGTAGTTCCCTGCCATTCATTTATCTTCTCAAATTTCTCCTTGAGTGATTGTTAAATTCTTAACTTCTGTGGACACTATTATATCCATAGAAGTTATGGTTTTGGGCAAGCACTATCACAATTATTTCATCCTCTGTTCGTAAACCTTGATGCCACTATTCTTTATATTCCTTCTCTTAACGTGTAGTATTTTGTTTGTGTGGAAAATATTTTTCCTTGCCCTTTTGGATCTACTTACCAAAAAAATAAACATTGATTTTATGCCAGTATCTTATAAGTTGTTAAATTGCCTTTAATTATAAGCTTTTCAACGTGCATTCTCCCCCACCAGTTCAAGTTAGAGGGCCGTTTTTTTTATTTTCAAGACGTTTTATGATTTATTTTTTGCACATTTGTTGGATAAAAACCCCATTTTATTAAAGTAAAGCAGAATTGCAAAAGTTAGGAAGACCTTTTCTGAAAATTTGCATTATAATTTAAAAAAAAAGTGAATCTTATATGCATGCATAATGCTTGATACTCTCAATATCACAAGAAAATTGCATTGCCACGTAACTGGTTTGGTGAATTGTATGCTTTTGGTTTGTCAGACACTTTGGTCCGTCAGGCCGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGCAGGGGCCGAAATTATCGTAAACAGGTGAGGTAATATAGAAGTTGACTTTTGTTTATTCAGTAAACTCCCTTTTGAATCATGTTGATTCAGAATGTGGAGCTTTGCTGTAATACTGAGCTCTTTATTGATATATATTTTTTTTTTTTGACAATTTTTCTCCTCTCTAGAGAACAAAGTGGTAACTTAATAGAACTTATATATGTAGATGTTTGTCTTCGAGAACTCACTATTAACGTTCAAATTATCTCCAGGGTCAAATGCTAACTTTAGTTGAATATCTGCTACTACTGTACCGTGCCTTGTTGCCTACTCCGGTCTGGTATCGTTTCTTTTTGAACAAAGAGTACGGGAGTCTATTTTCATCACTGTTGACAGGACTGTATTTGACTTTCAAACTCACATCTGTTGTTGAAAAGGTATATTTCCTATAATTTTGATTTTTTGACTGATTTTTACTATTATAACGATCATTCTGTTGCTAGATGGTCTCTCATGTCTGTTATCTCCCTTTCCAGTTTCATATTTCATTCTGATGTGAATTTCAGGTGCAATCCTTCTTTGCTGCTTTGAGAGCATTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTATGTTTGATCCCATTTATGCATATGCCTTCTCCAATTAACCAAACTTTCTTAGCATTCGATGCTGTTTATGTTTTCATTATATTGTATTTTATCTTTTTTGGTATCTTTGAGTTTCCTGTCCTGGCTGTACTTTGACTAGTCTCACAGGTCATGTTACTTCTGTAAAATATTACATCTAAATTAAATAACAGAACCATAGTTCTTTTGTTGATTATTTGAATGTCATTTCCGTATCTTTCTTTCAAGAATCGACATTAGTATCGTTCTTTCAAGAATTTACTTTAGTTTCTTTGTCTATAGATGATGGATGACACTTTTGTCAAAATAACTTTCAATAGTGCCCATTTAGATTGCACAAACTTTGAAACAATTAATTGACATAGTCTACACATTGTACCCTATTTTCCATTTCATGTGCCACTAAGTTTTTCAAGTGCTGTATACTTCTAGCAATATGCTAAAAGCTCTTGATCTATGAACTATGATCATACTCGAGGGTGAGAATATTTATTTCAACAGAATCATGCATATTACTCTTGTACAATTCTTGGCTTATCTGTGCTAGGCAAAAGAAACTATACTTGCCTATCCTATGAGGTTTTCATGAAAAATAGGCAGTTGAAAGTTTAAAACTTCTCCAATTTGTGGATCCATGAGAGTTTTTGTGGATTGCGTAAGTTTTGAGGGTTCTACTTTTCGAACTTTATTCTTTTGAGGTCGAGAGATCAGTTGTAGGTTTATTTACTTATTATTAACGAGAGAAAAAAATAGAAATCAATTGAGAGTTCTGATAAAGGAATAGGCGATTGGCTTTTTAATGCCATAAAAGCTGTTTTGTGGGGTATTTAGTGGGGAAAATTAACAAATAATATTTGAGAAAATTCCTTGGGAATGGAATAAAAGAGGAGTGGGTCTTGGTGAAAGTCATTCATTTGTGGAGTACGCAATCTCAAGCTCTTTCTGTAATATTTTGGGCTTTTTTTGTTTAAATCTGTAATCTGTAGGGGGCTTTCTTTGAACTTTTCCTAAAGGGAGTTTGTAATTTCTGACTCTTTATTTGTAAACTTTCAACGAAGGAGAGAGCAAAATGTCCTTGAGATCTTACAGGTTATTTGCCTAATGCAGGTCAGTGCCGCTGGTGATTTGTGTGCTATTTGCCAAGAAAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTAAGTTCATCGCATAAAATCCGCTACGCTTAATACCTTCATGGTATCGCATTTTGTGTTCTGCATAATGATAAACTTCTGAACATTTAGGGCGAGGTTGACATATCTTCTAATTTAAACACTTTTCAAAAGTATTTTTTTTTCTGAAAACACTTCTTTTTCATTACAGTAGGGTCTAAATTAAAATACTTTGGGTGTTTGATTTCATTTTCTGAAAAATTATTTGATTCACAAAGTTTGTTTGGATACACCGCATCTAAAAATGATACTACAAAGGTCAAATTACCTGAAAGTGATTTTAAAGTAGTTCTCGGTTAATAACTTTTTGGAGAATCAATTTTAAAGTGTTTTTTTTTTTCAAAAAATGATTTAAAACCAATTTGATGGTTTTAAAAGTGATTTTTATTTGTTACCGAACACCCTAGAATTAGTTTGACCATATTTAATAGTCACATGTTATACATGTAACGCTCCAACCCGCTATAGAGTCTGTGTTCGGTTTTCTGATAATTTAGAGAATGAGGCCAAGGTTAGGTGGTAGGGTGCCTTTTATTTTCTGCTCTTTTCTTGTTGTGGCTCAAGGGCTATATGTCTCCACTATATGGTGTGCACAAAGTCTGATCTTACGAGCAAGACCCTGCACCCGACAACGGGTTTTTACTTAATAATGGAAGATCTTGTTAGGACTTGATAATGAGGGGTAATATGGTGGTTAGCAAGGTGGTTTGTTTGGGCATAATTGTTCTAAGTAGAGGGATTGGCATAGGAGAAAGAAGCAATTTTGGTCTTGAGTGAACTTGGTGAAGGTTCAAGTACCTCGAATTATTATCTAATATTGTTTTATCGTTTCATATAAAATTCAAGTCTTATTATCTAGTTCCTAAGGAAATCTCAAACAAAACAAAACTAGCATTATGTCCCTCTTTTGTCAACCTGTACATCTAAGTAGAGAAGATGGGGGCTCATATCAACTTTAGTGTTCTAACTTATTGTTCACTTCGGTATGAATATCGGATTGGATGGTGCTCTGTGCAGGTTCGAGCGGGAACGAACATGTCCGTTGTGCAGGGCTTTGGTTAAACCCGCGGATCTGAGGTCATTTGGTGATGGATCAACAAGTCTGTTTTTCCAGGTTTTC

mRNA sequence

ATGGAAGCGTCTGGTAGCGACCCCGACGCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTGGCTGCCTCGAACATAATTCAGGCTCCTCTTTCTGCGTTGTTGGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAATCTGAGGCATTGATAAGTGCACGGTTGCCTTCGGGGTTTCGTGACCATATTCGCAGCCAGATTGAAGAATCTTCTGGTTCCACCAACGACGGAGAGGTTTCAATTAGGATCATTGGGGCGGGGGAACAAGAACATGGTAGGGATGGTGCTGGATTAGTTGTGGGGCAGGCGAGGGAAGTAGGCGGTCAGAATGCTGTATCGTCACAATCTGTTTCGGGGTTGGCATCAGAGCTTAGCCAGGGAGATCCTGCTCCTGAACGTGGGGCAAGAGAAGGCATTCCTCAACCAATAAACGGAGGTGCTGATGGAGATGCCTTGGAGGCGGCTGGGGGAAATGGCAGGGATTCTTCTTACCAAAGATATGATATTCAGCAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATTTGGATAGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATCTCTGTTTTGGTTGGAATTTCTCTTGCATTCACTATTCATGTTATTGGTGTGTATTGGTGGTATCAGAATGATGATCTTTTATATCCACTGATCATGCTTCCTCCCAGAGCGATACCTCCTTTCTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTCCGTCAGGCCGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGCAGGGGCCGAAATTATCGTAAACAGGGTCAAATGCTAACTTTAGTTGAATATCTGCTACTACTGTACCGTGCCTTGTTGCCTACTCCGGTCTGGTATCGTTTCTTTTTGAACAAAGAGTACGGGAGTCTATTTTCATCACTGTTGACAGGACTGTATTTGACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAGAGCATTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTCAGTGCCGCTGGTGATTTGTGTGCTATTTGCCAAGAAAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGAACATGTCCGTTGTGCAGGGCTTTGGTTAAACCCGCGGATCTGAGGTCATTTGGTGATGGATCAACAAGTCTGTTTTTCCAGGTTTTC

Coding sequence (CDS)

ATGGAAGCGTCTGGTAGCGACCCCGACGCTCATAGAGCTGCTTCCACCAGTGGTAGTTCAAGAAGGTTTGGAATGTTGGCTGCCTCGAACATAATTCAGGCTCCTCTTTCTGCGTTGTTGGAGTATTCGGGTCTTCTTCGTGGCCGCCCAAGTCATCAAGAATCTGAGGCATTGATAAGTGCACGGTTGCCTTCGGGGTTTCGTGACCATATTCGCAGCCAGATTGAAGAATCTTCTGGTTCCACCAACGACGGAGAGGTTTCAATTAGGATCATTGGGGCGGGGGAACAAGAACATGGTAGGGATGGTGCTGGATTAGTTGTGGGGCAGGCGAGGGAAGTAGGCGGTCAGAATGCTGTATCGTCACAATCTGTTTCGGGGTTGGCATCAGAGCTTAGCCAGGGAGATCCTGCTCCTGAACGTGGGGCAAGAGAAGGCATTCCTCAACCAATAAACGGAGGTGCTGATGGAGATGCCTTGGAGGCGGCTGGGGGAAATGGCAGGGATTCTTCTTACCAAAGATATGATATTCAGCAGGCTGCTCGGGGGATTGAGCAGATTCTCCCATTTAGTTTTCTTCTACTGGTGGTCTTCATTCGACAGCATTTGCAAGGCTTCTTTGTGACAATTTGGATAGCTGCTTTCATGTACAAGTCAAATGATATTTTGCGAAAACAAACAGCTTTGAAGGGAGAGAGAAAAATCTCTGTTTTGGTTGGAATTTCTCTTGCATTCACTATTCATGTTATTGGTGTGTATTGGTGGTATCAGAATGATGATCTTTTATATCCACTGATCATGCTTCCTCCCAGAGCGATACCTCCTTTCTGGCATGCTATTTTCATCATCATGGTGAATGACACTTTGGTCCGTCAGGCCGTGATGGTGGTCAAGTGTGTTCTATTGATGTATTACAAGAACAGCAGGGGCCGAAATTATCGTAAACAGGGTCAAATGCTAACTTTAGTTGAATATCTGCTACTACTGTACCGTGCCTTGTTGCCTACTCCGGTCTGGTATCGTTTCTTTTTGAACAAAGAGTACGGGAGTCTATTTTCATCACTGTTGACAGGACTGTATTTGACTTTCAAACTCACATCTGTTGTTGAAAAGGTGCAATCCTTCTTTGCTGCTTTGAGAGCATTGTCACGTAAAGAGGTGCATTATGGGGCATATGCAACGTCAGAGCAGGTCAGTGCCGCTGGTGATTTGTGTGCTATTTGCCAAGAAAAGATGCATGCTCCTATCCTACTCCGATGTAAACACATATTTTGTGAAGATTGTGTATCAGAGTGGTTCGAGCGGGAACGAACATGTCCGTTGTGCAGGGCTTTGGTTAAACCCGCGGATCTGAGGTCATTTGGTGATGGATCAACAAGTCTGTTTTTCCAGGTTTTC

Protein sequence

MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALISARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAVSSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF

Homology

[Close]

BLAST of MS013842 vs. NCBI nr
Match: XP_022156230.1 (RING finger and transmembrane domain-containing protein 2 [Momordica charantia])

HSP 1 Score: 905.6 bits (2339), Expect = 1.8e-259
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV
Sbjct: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120

Query: 121 SSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQA 180
           SSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQA
Sbjct: 121 SSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQA 180

Query: 181 ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG 240
           ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG
Sbjct: 181 ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG 240

Query: 241 ISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCV 300
           ISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCV
Sbjct: 241 ISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCV 300

Query: 301 LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY 360
           LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY
Sbjct: 301 LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY 360

Query: 361 LTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 420
           LTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC
Sbjct: 361 LTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 420

Query: 421 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 466

[Close]

BLAST of MS013842 vs. NCBI nr
Match: XP_004142726.1 (RING finger and transmembrane domain-containing protein 2 isoform X2 [Cucumis sativus] >KGN54474.1 hypothetical protein Csa_012295 [Cucumis sativus])

HSP 1 Score: 855.9 bits (2210), Expect = 1.6e-244
Identity = 445/471 (94.48%), Postives = 452/471 (95.97%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           ME SGSDPD+HRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDH+RS IEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQAR+V GQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SSQSVSGLA-----SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180
           S QSVSGLA     SELSQG+ A ERGAREGIP+ IN GADGDA EAAGGN RDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of MS013842 vs. NCBI nr
Match: XP_038881776.1 (RING finger and transmembrane domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 855.9 bits (2210), Expect = 1.6e-244
Identity = 447/471 (94.90%), Postives = 452/471 (95.97%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           ME SGSDPD+HRAASTS SSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTS-SSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDH+RSQIEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQARE  GQN V
Sbjct: 61  ARLPSGFRDHLRSQIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREGSGQNTV 120

Query: 121 SSQSVSG-----LASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180
           S QSVSG     LASELSQG+ A ERGAREGIPQ IN  ADGDA EAAGGN RDSSYQRY
Sbjct: 121 SLQSVSGLASVTLASELSQGESATERGAREGIPQSINASADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 470

[Close]

BLAST of MS013842 vs. NCBI nr
Match: XP_031740196.1 (RING finger and transmembrane domain-containing protein 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 855.9 bits (2210), Expect = 1.6e-244
Identity = 445/471 (94.48%), Postives = 452/471 (95.97%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           ME SGSDPD+HRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 11  MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 70

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDH+RS IEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQAR+V GQNAV
Sbjct: 71  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 130

Query: 121 SSQSVSGLA-----SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180
           S QSVSGLA     SELSQG+ A ERGAREGIP+ IN GADGDA EAAGGN RDSSYQRY
Sbjct: 131 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 190

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 191 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 250

Query: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 251 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 310

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 311 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 370

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 371 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 430

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 431 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 481

[Close]

BLAST of MS013842 vs. NCBI nr
Match: XP_008463298.1 (PREDICTED: RING finger and transmembrane domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 850.9 bits (2197), Expect = 5.2e-243
Identity = 442/471 (93.84%), Postives = 449/471 (95.33%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           ME SGSDPD+HR ASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRPASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDH+RS IEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQAR+V GQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SSQSVSGLA-----SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180
           S QSVSGLA     SELSQG+ A ERGAREGIP+ IN GADGD  E AGGN RDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDTSEVAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of MS013842 vs. ExPASy Swiss-Prot
Match: Q96EX2 (RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RNFT2 PE=2 SV=2)

HSP 1 Score: 150.2 bits (378), Expect = 5.7e-35
Identity = 99/329 (30.09%), Postives = 170/329 (51.67%), Query Frame = 0


Query: 153 GGADGDALEAAGGNGRDSSYQRYDIQQAARG------------IEQILPFSFLLLVVFIR 212
           G   G  L+  GG+ R  S +  D Q                 +++ LPF  +LL     
Sbjct: 120 GHRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCF 179

Query: 213 QHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDD 272
           QH  G  V I +A+    +N  LR+Q +LK +R + V++ I      + + V + + +  
Sbjct: 180 QHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQ 239

Query: 273 LLYPLIMLPPR-AIPPFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQM 332
           L   LI L P   +  F+  ++I+ + D +++   + +KC+++   K       + +G+ 
Sbjct: 240 LYNSLIFLKPNLEMLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKF 299

Query: 333 LTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLYLTFKLTSVVEKVQSFFA 392
             ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY   K   +  +V     
Sbjct: 300 YLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRK 359

Query: 393 ALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERER 452
           AL+ L   + +YG  AT +Q + AGD+CAICQ +   P++L C+H+FCE+C+  W +RER
Sbjct: 360 ALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRER 419

Query: 453 TCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           TCPLCR+ V    LR + DG+TS  FQV+
Sbjct: 420 TCPLCRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of MS013842 vs. ExPASy Swiss-Prot
Match: Q5RAG4 (RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=9601 GN=RNFT2 PE=2 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.4e-33
Identity = 98/329 (29.79%), Postives = 168/329 (51.06%), Query Frame = 0


Query: 153 GGADGDALEAAGGNGRDSSYQRYDIQQAARG------------IEQILPFSFLLLVVFIR 212
           G   G  L+  GG+ R  S +  D Q                 +++ LPF  +LL     
Sbjct: 120 GHRGGSLLQHVGGDHRGHSEEGGDEQPGTPAPALSELKAVICWLQKGLPFILILLAKLCF 179

Query: 213 QHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDD 272
           QH  G  V I +A+    +N  LR+Q +LK +R + V++ I      + + V + + +  
Sbjct: 180 QHKLGIAVCIGMASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTLYVLYTFSSQQ 239

Query: 273 LLYPLIMLPPR-AIPPFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQM 332
           L   LI L P      F+  ++I+ + D +++   + +KC+++   K       + +G+ 
Sbjct: 240 LYNSLIFLKPNLETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKF 299

Query: 333 LTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF--SSLLTGLYLTFKLTSVVEKVQSFFA 392
             ++E L  L+R+L+P  +WY++ +  +  + +    +L  LY   K   +  +V     
Sbjct: 300 YLVIEELSQLFRSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGVRK 359

Query: 393 ALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERER 452
           AL+ L   + +YG  AT +Q + AGD+CAICQ +   P++L C+H+FCE+C+  W +RER
Sbjct: 360 ALKLLCTSQ-NYGVRATGQQCTEAGDICAICQAEFREPLILLCQHVFCEECLCLWLDRER 419

Query: 453 TCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           TCPL R+ V    LR + DG+TS  FQV+
Sbjct: 420 TCPLSRS-VAVDTLRCWKDGATSAHFQVY 444

[Close]

BLAST of MS013842 vs. ExPASy Swiss-Prot
Match: Q3UF64 (RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rnft2 PE=2 SV=2)

HSP 1 Score: 139.0 bits (349), Expect = 1.3e-31
Identity = 106/378 (28.04%), Postives = 181/378 (47.88%), Query Frame = 0


Query: 104 AGLVVGQAREVGGQNAVSSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAA 163
           AGLV+G     G        +        ++G     R A        + G  G  L+  
Sbjct: 74  AGLVLGSTAGGGDVFIPMPATRDEAGGRSAEGSTYHHRQAHHHFHHGAHRG--GSLLQHV 133

Query: 164 GGNGRDSSYQRYDIQQAARG------------IEQILPFSFLLLVVFIRQHLQGFFVTIW 223
           GG+ R  S +  D Q                 +++ LPF  +LL     QH  G  V I 
Sbjct: 134 GGDHRGHSEEGVDEQPGTPAPALSELKAVISWLQKGLPFILILLAKLCFQHKLGIAVCIG 193

Query: 224 IAAFMYKSNDILRKQTALKGERKISVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPR 283
           +A+    +N  LR+Q +LK +R + V++ I      + + V + + +  L   LI L P 
Sbjct: 194 MASTFAYANSTLREQVSLKEKRSVLVILWILAFLAGNTMYVLYTFSSQQLYSSLIFLKPN 253

Query: 284 -AIPPFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLY 343
                F+  ++I+ + D +++   + +KC+++   K       + +G+   ++E L  L+
Sbjct: 254 LETLDFFDLLWIVGIADFVLKYITIALKCLIVALPKIILA--VKSKGKFYLVIEELSQLF 313

Query: 344 RALLPTPVWYRFFLNKEYGSLF--SSLLTGLYLTFKLTSVVEKVQSFFAALRALSRKEVH 403
           R+L+P  +WY++ +  +  + +    +L  LY   K   +  +V     AL+ L   + +
Sbjct: 314 RSLVPIQLWYKYIMGDDSSNSYFLGGVLIVLYSLCKSFDICGRVGGLRKALKLLCTSQ-N 373

Query: 404 YGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKP 463
           YG  AT +Q + AG +CAICQ +   P++L C+H+FCE+C+  W +RERTCPLCR+ V  
Sbjct: 374 YGVRATGQQCTEAGAVCAICQAEFRDPMILLCQHVFCEECLCLWLDRERTCPLCRS-VAV 433

Query: 464 ADLRSFGDGSTSLFFQVF 467
             LR + DG+TS   QV+
Sbjct: 434 DTLRCWKDGATSAHLQVY 445

[Close]

BLAST of MS013842 vs. ExPASy Swiss-Prot
Match: Q6NTV1 (E3 ubiquitin-protein ligase RNFT1 OS=Xenopus laevis OX=8355 GN=rnft1 PE=2 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 3.8e-31
Identity = 95/321 (29.60%), Postives = 164/321 (51.09%), Query Frame = 0


Query: 156 DGDALEAAGGNGRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAF 215
           D    E A  + R+ S    ++    + +E+  P+  +     + QH+ G  V I +   
Sbjct: 104 DASGPEDANDDSREQSNSISEVFHLYKWLEKSFPYILIFSAKLVVQHITGISVGIGLLTT 163

Query: 216 MYKSNDILRKQTALKGE-RKISVL-VGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAI 275
              +N  +  Q  L+ +  K+  L V + L F+  ++  Y+ + +  L Y L+ + P   
Sbjct: 164 FLYANKCIVNQVFLRDKCSKLQCLWVLVFLLFSSFLL--YYTFSSQALYYSLVFMNPSLG 223

Query: 276 P-PFWHAIFIIMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRA 335
           P  F+ A++++ + D + +   M +KC++L+    S   +++ +G     +E L   Y  
Sbjct: 224 PLHFFDALWVVGITDFIGKFFFMGLKCIILLV--PSFVMSHKSKGYWYMALEELAQCYCT 283

Query: 336 LLPTPVWYRFFLNKEYGSL-------FSSLLTGLYLTFKLTSVVEKVQSFFAALRALSRK 395
           L+ TPVW+R+ +  +YG+L       F  LL  LYL  K+  +  + ++    LR L   
Sbjct: 284 LVSTPVWFRYLI--DYGNLDSGAEWHFGILLALLYLILKILIIFGQRKTSSDCLR-LFLS 343

Query: 396 EVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRAL 455
           + +YG  AT  Q S A  +CAICQ +   PI L C+H+FCE+C+S WF +E+TCPLCR L
Sbjct: 344 QPNYGTTATKRQCSEADGMCAICQAEFTKPIALICQHVFCEECISSWFNKEKTCPLCRTL 403

Query: 456 VKPADLRSFGDGSTSLFFQVF 467
           +       + DG+TSL  ++F
Sbjct: 404 ISNHS-HKWKDGATSLQLRIF 416

[Close]

BLAST of MS013842 vs. ExPASy Swiss-Prot
Match: Q9DCN7 (E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 8.6e-31
Identity = 92/309 (29.77%), Postives = 158/309 (51.13%), Query Frame = 0


Query: 166 NGRDSSYQRYDIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTI-WIAAFMYKSNDILR 225
           +G   S    + +   + +++ LP+  +L +  + QH+ G  + I  +  FMY +  I+ 
Sbjct: 93  SGEHGSGSFSEFRYLFKWLQKSLPYILILGIKLVMQHITGISLGIGLLTTFMYANKSIV- 152

Query: 226 KQTALKGERKISVLVGISLAFTI-HVIGVYWWYQNDDLLYPLIMLPPRAIP-PFWHAIFI 285
            Q  L+ ER   +     L F     + +Y+ + +  L Y LI L P      FW  ++I
Sbjct: 153 NQVFLR-ERSSKLRCAWLLVFLAGSSVLLYYTFHSQSLHYSLIFLNPTLEQLSFWEVLWI 212

Query: 286 IMVNDTLVRQAVMVVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRF 345
           + + D +++   M +KC++L+    S    ++ +G    L+E L   YR  +P PVW+R+
Sbjct: 213 VGITDFILKFFFMGLKCLILLV--PSFIMPFKSKGYWYMLLEELCQYYRIFVPIPVWFRY 272

Query: 346 FLN-KEYGSL----FSSLLTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQ 405
            ++  E+G++       LL  LYL  KL      +++F   LR    +   YG  A+  Q
Sbjct: 273 LISYGEFGNVTTWSLGILLALLYLILKLLDFFGHLRTFRQVLRVFFTRP-SYGVPASKRQ 332

Query: 406 VSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDG 465
            S    +C ICQ +   P+LL C+HIFCE+C++ WF RE+TCPLCR ++    +  + DG
Sbjct: 333 CSDMDGICTICQAEFQKPVLLFCQHIFCEECITLWFNREKTCPLCRTVISEC-INKWKDG 392

Query: 466 STSLFFQVF 467
           +TS   Q++
Sbjct: 393 ATSSHLQMY 395

[Close]

BLAST of MS013842 vs. ExPASy TrEMBL
Match: A0A6J1DPQ0 (RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia OX=3673 GN=LOC111023167 PE=4 SV=1)

HSP 1 Score: 905.6 bits (2339), Expect = 8.6e-260
Identity = 466/466 (100.00%), Postives = 466/466 (100.00%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV
Sbjct: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120

Query: 121 SSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQA 180
           SSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQA
Sbjct: 121 SSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQA 180

Query: 181 ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG 240
           ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG
Sbjct: 181 ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG 240

Query: 241 ISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCV 300
           ISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCV
Sbjct: 241 ISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCV 300

Query: 301 LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY 360
           LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY
Sbjct: 301 LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY 360

Query: 361 LTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 420
           LTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC
Sbjct: 361 LTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 420

Query: 421 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 466

[Close]

BLAST of MS013842 vs. ExPASy TrEMBL
Match: A0A0A0L088 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 PE=4 SV=1)

HSP 1 Score: 855.9 bits (2210), Expect = 7.8e-245
Identity = 445/471 (94.48%), Postives = 452/471 (95.97%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           ME SGSDPD+HRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDH+RS IEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQAR+V GQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SSQSVSGLA-----SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180
           S QSVSGLA     SELSQG+ A ERGAREGIP+ IN GADGDA EAAGGN RDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDASEAAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of MS013842 vs. ExPASy TrEMBL
Match: A0A1S3CIV8 (RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103501489 PE=4 SV=1)

HSP 1 Score: 850.9 bits (2197), Expect = 2.5e-243
Identity = 442/471 (93.84%), Postives = 449/471 (95.33%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           ME SGSDPD+HR ASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGR SHQESEALIS
Sbjct: 1   MEGSGSDPDSHRPASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRQSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSGFRDH+RS IEESSG+TNDGEVSIRIIGAGE EHGRDGAGLVVGQAR+V GQNAV
Sbjct: 61  ARLPSGFRDHLRSHIEESSGATNDGEVSIRIIGAGEPEHGRDGAGLVVGQARDVSGQNAV 120

Query: 121 SSQSVSGLA-----SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRY 180
           S QSVSGLA     SELSQG+ A ERGAREGIP+ IN GADGD  E AGGN RDSSYQRY
Sbjct: 121 SLQSVSGLASVTLGSELSQGESANERGAREGIPESINAGADGDTSEVAGGNSRDSSYQRY 180

Query: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240
           DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI
Sbjct: 181 DIQQAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKI 240

Query: 241 SVLVGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVM 300
           SVLV ISLAFTIHVIGVYWWYQNDDLLYPLIM PPRAIPPFWHAIFIIMVNDTLVRQAVM
Sbjct: 241 SVLVCISLAFTIHVIGVYWWYQNDDLLYPLIMCPPRAIPPFWHAIFIIMVNDTLVRQAVM 300

Query: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360
           VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL
Sbjct: 301 VVKCVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSL 360

Query: 361 LTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420
           LTGLYLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP
Sbjct: 361 LTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAP 420

Query: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 ILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 471

[Close]

BLAST of MS013842 vs. ExPASy TrEMBL
Match: A0A6J1EDR3 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC111432304 PE=4 SV=1)

HSP 1 Score: 844.0 bits (2179), Expect = 3.1e-241
Identity = 437/467 (93.58%), Postives = 444/467 (95.07%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           MEASGSDPD+HR ASTSGSSRRFGMLAASN+IQAPLSALLEYSGLLRGRPSHQESEALIS
Sbjct: 1   MEASGSDPDSHRTASTSGSSRRFGMLAASNMIQAPLSALLEYSGLLRGRPSHQESEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPSG RDH+RSQIEESSG TNDGEVSIRIIGAGEQEH RD AGLVVGQ REVGGQN+ 
Sbjct: 61  ARLPSGLRDHLRSQIEESSGVTNDGEVSIRIIGAGEQEHVRDSAGLVVGQVREVGGQNSA 120

Query: 121 SSQSVSGLA-SELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQ 180
           S QSVSGLA SE SQGD A  RG  EGIPQP+N G DGDA EAAGGN RDSSYQRYDIQQ
Sbjct: 121 SLQSVSGLASSEFSQGDAATGRGVIEGIPQPVNEGPDGDASEAAGGNSRDSSYQRYDIQQ 180

Query: 181 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 240
           AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV
Sbjct: 181 AARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLV 240

Query: 241 GISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC 300
            ISLAFT H+IGVYWWYQ DDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQA MVVKC
Sbjct: 241 AISLAFTFHIIGVYWWYQKDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAGMVVKC 300

Query: 301 VLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 360
           VLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL
Sbjct: 301 VLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGL 360

Query: 361 YLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 420
           YLTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR
Sbjct: 361 YLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLR 420

Query: 421 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 CKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467

[Close]

BLAST of MS013842 vs. ExPASy TrEMBL
Match: A0A6J1IS82 (E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC111478227 PE=4 SV=1)

HSP 1 Score: 843.6 bits (2178), Expect = 4.0e-241
Identity = 436/466 (93.56%), Postives = 446/466 (95.71%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPSHQESEALIS 60
           ME S  DPD+HRAASTSGSSRRFG+LAASNIIQAPLSALLEYSGLLRGRPSHQE EALIS
Sbjct: 1   MEGSSIDPDSHRAASTSGSSRRFGLLAASNIIQAPLSALLEYSGLLRGRPSHQEPEALIS 60

Query: 61  ARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNAV 120
           ARLPS FR H+RSQI+ESS ++NDGEVSIRIIGAGE EHGRDGAGLVVGQARE  GQNA 
Sbjct: 61  ARLPSAFRGHLRSQIDESSSASNDGEVSIRIIGAGEPEHGRDGAGLVVGQAREFSGQNAA 120

Query: 121 SSQSVSGLASELSQGDPAPERGAREGIPQPINGGADGDALEAAGGNGRDSSYQRYDIQQA 180
           SSQSV+ LASELSQGD A ER AREGIPQ IN GADGDA EAAGGN RDSSYQRYDIQQA
Sbjct: 121 SSQSVT-LASELSQGDSATERSAREGIPQSINAGADGDASEAAGGNSRDSSYQRYDIQQA 180

Query: 181 ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG 240
           ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG
Sbjct: 181 ARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVLVG 240

Query: 241 ISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCV 300
           ISLAFTIHVIGVYWWYQND LLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKC+
Sbjct: 241 ISLAFTIHVIGVYWWYQNDGLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVKCI 300

Query: 301 LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY 360
           LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY
Sbjct: 301 LLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTGLY 360

Query: 361 LTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRC 420
           LTFKLTSVVEKVQSFFAAL+ALSRKEVHYGAYATSEQV+AAGDLCAICQEKMHAPILLRC
Sbjct: 361 LTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKMHAPILLRC 420

Query: 421 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF
Sbjct: 421 KHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 465

[Close]

BLAST of MS013842 vs. TAIR 10
Match: AT5G01960.1 (RING/U-box superfamily protein )

HSP 1 Score: 598.6 bits (1542), Expect = 4.3e-171
Identity = 329/468 (70.30%), Postives = 365/468 (77.99%), Query Frame = 0


Query: 1   MEASGSDPDAHRAASTSGSSRRFGMLAASNIIQAPLSALLEYSGLLRGRPS-HQESEALI 60
           ME  G+  D+ R     GS RR  +L+ASNIIQAP+S LLEYSGL R RPS   E+E L+
Sbjct: 1   METPGASHDSFR-----GSPRRNSILSASNIIQAPISTLLEYSGLFRARPSPSHEAETLV 60

Query: 61  SARLPSGFRDHIRSQIEESSGSTNDGEVSIRIIGAGEQEHGRDGAGLVVGQAREVGGQNA 120
           S               ++SSG +N GEV+IRIIG  EQ+   D   L     RE G    
Sbjct: 61  S---------------DDSSGLSN-GEVAIRIIGNTEQDAETDTNAL-----REPGHSEL 120

Query: 121 VSSQSVSGLASELSQGDPAPERGAREGIPQPINGG-ADGDALEAAGGNGRDSSYQRYDIQ 180
                   L S  +Q DP    GA EG  Q   G  A GDA        RDS YQRYDIQ
Sbjct: 121 --------LGSSATQVDPM--GGASEGASQAAPGDPAAGDAA------SRDSPYQRYDIQ 180

Query: 181 QAARGIEQILPFSFLLLVVFIRQHLQGFFVTIWIAAFMYKSNDILRKQTALKGERKISVL 240
           QAAR IEQILPFS LLLVVFIRQHLQGFFV IWIAA M+KSNDIL+KQTALKGER IS L
Sbjct: 181 QAARWIEQILPFSLLLLVVFIRQHLQGFFVAIWIAAVMFKSNDILKKQTALKGERHISAL 240

Query: 241 VGISLAFTIHVIGVYWWYQNDDLLYPLIMLPPRAIPPFWHAIFIIMVNDTLVRQAVMVVK 300
           +GIS+AFT HV+GVYWW++ DDLLYPLIMLPP++IPPFWHAIFII+VNDTLVRQA M+ K
Sbjct: 241 IGISVAFTAHVVGVYWWFRKDDLLYPLIMLPPKSIPPFWHAIFIIVVNDTLVRQASMIFK 300

Query: 301 CVLLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLFSSLLTG 360
           C LLMYYKNSRGRNYRKQGQ+LTLVEY +LLYR+LLPTPVWYRFFLNK+YGSLFSSL+TG
Sbjct: 301 CFLLMYYKNSRGRNYRKQGQLLTLVEYFMLLYRSLLPTPVWYRFFLNKDYGSLFSSLMTG 360

Query: 361 LYLTFKLTSVVEKVQSFFAALRALSRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILL 420
           LYLTFKLTSVVEKVQSFF AL+ALSRKEVHYG+YAT+EQV+AAGDLCAICQEKMH PILL
Sbjct: 361 LYLTFKLTSVVEKVQSFFTALKALSRKEVHYGSYATTEQVNAAGDLCAICQEKMHTPILL 420

Query: 421 RCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQVF 467
           RCKH+FCEDCVSEWFERERTCPLCRALVKPADL+SFGDGSTSLFFQ+F
Sbjct: 421 RCKHMFCEDCVSEWFERERTCPLCRALVKPADLKSFGDGSTSLFFQIF 426

[Close]

BLAST of MS013842 vs. TAIR 10
Match: AT1G65040.2 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-09
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 325 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALRAL 384
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    +  
Sbjct: 214 FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 273

Query: 385 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 444
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 274 SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 333

Query: 445 RALVKPAD 451
           RALV PA+
Sbjct: 334 RALVVPAE 337

[Close]

BLAST of MS013842 vs. TAIR 10
Match: AT1G65040.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-09
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 325 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALRAL 384
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    +  
Sbjct: 35  FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 94

Query: 385 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 444
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 95  SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 154

Query: 445 RALVKPAD 451
           RALV PA+
Sbjct: 155 RALVVPAE 158

[Close]

BLAST of MS013842 vs. TAIR 10
Match: AT1G65040.3 (RING/U-box superfamily protein )

HSP 1 Score: 62.0 bits (149), Expect = 1.5e-09
Identity = 45/128 (35.16%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 325 YLLLLYRALLPTPVWYRFFLN--KEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALRAL 384
           + L L R LL   ++  FFL     YG L   L+  LY TF+   +  +V  +    +  
Sbjct: 143 FYLELVRDLLHLSMYLCFFLMIFMNYG-LPLHLIRELYETFRNFKI--RVTDYLRYRKIT 202

Query: 385 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 444
           S     +   AT E++S+    C IC+E+M +   L C H+F   C+  W ER+ TCP C
Sbjct: 203 SNMNDRF-PDATPEELSSNDATCIICREEMTSAKKLVCGHLFHVHCLRSWLERQNTCPTC 262

Query: 445 RALVKPAD 451
           RALV PA+
Sbjct: 263 RALVVPAE 266

[Close]

BLAST of MS013842 vs. TAIR 10
Match: AT3G16090.1 (RING/U-box superfamily protein )

HSP 1 Score: 59.3 bits (142), Expect = 9.5e-09
Identity = 43/128 (33.59%), Postives = 65/128 (50.78%), Query Frame = 0


Query: 325 YLLLLYRALLPTPVWYRFF--LNKEYGSLFSSLLTGLYLTFKLTSVVEKVQSFFAALRAL 384
           + L L R LL   ++  FF  +   YG +   LL  LY TF+   +  +V  +    +  
Sbjct: 214 FYLELIRDLLHLSMYICFFFVIFMNYG-VPLHLLRELYETFRNFQI--RVSDYLRYRKIT 273

Query: 385 SRKEVHYGAYATSEQVSAAGDLCAICQEKMHAPILLRCKHIFCEDCVSEWFERERTCPLC 444
           S     +   AT E+++A+   C IC+E+M     L C H+F   C+  W ER++TCP C
Sbjct: 274 SNMNDRF-PDATPEELTASDATCIICREEMTNAKKLICGHLFHVHCLRSWLERQQTCPTC 333

Query: 445 RALVKPAD 451
           RALV P +
Sbjct: 334 RALVVPPE 337

The following BLAST results are available for this feature:

BLAST of MS013842 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022156230.1	1.8e-259	100.00	RING finger and transmembrane domain-containing protein 2 [Momordica charantia]	[more]
XP_004142726.1	1.6e-244	94.48	RING finger and transmembrane domain-containing protein 2 isoform X2 [Cucumis sa...	[more]
XP_038881776.1	1.6e-244	94.90	RING finger and transmembrane domain-containing protein 2 [Benincasa hispida]	[more]
XP_031740196.1	1.6e-244	94.48	RING finger and transmembrane domain-containing protein 2 isoform X1 [Cucumis sa...	[more]
XP_008463298.1	5.2e-243	93.84	PREDICTED: RING finger and transmembrane domain-containing protein 2 [Cucumis me...	[more]

BLAST of MS013842 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q96EX2	5.7e-35	30.09	RING finger and transmembrane domain-containing protein 2 OS=Homo sapiens OX=960...	[more]
Q5RAG4	1.4e-33	29.79	RING finger and transmembrane domain-containing protein 2 OS=Pongo abelii OX=960...	[more]
Q3UF64	1.3e-31	28.04	RING finger and transmembrane domain-containing protein 2 OS=Mus musculus OX=100...	[more]
Q6NTV1	3.8e-31	29.60	E3 ubiquitin-protein ligase RNFT1 OS=Xenopus laevis OX=8355 GN=rnft1 PE=2 SV=2	[more]
Q9DCN7	8.6e-31	29.77	E3 ubiquitin-protein ligase RNFT1 OS=Mus musculus OX=10090 GN=Rnft1 PE=2 SV=1	[more]

BLAST of MS013842 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DPQ0	8.6e-260	100.00	RING finger and transmembrane domain-containing protein 2 OS=Momordica charantia...	[more]
A0A0A0L088	7.8e-245	94.48	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G337310 P...	[more]
A0A1S3CIV8	2.5e-243	93.84	RING finger and transmembrane domain-containing protein 2 OS=Cucumis melo OX=365...	[more]
A0A6J1EDR3	3.1e-241	93.58	E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita moschata OX=3662 GN=LOC11143...	[more]
A0A6J1IS82	4.0e-241	93.56	E3 ubiquitin-protein ligase RNFT1-like OS=Cucurbita maxima OX=3661 GN=LOC1114782...	[more]

BLAST of MS013842 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01960.1	4.3e-171	70.30	RING/U-box superfamily protein	[more]
AT1G65040.2	1.5e-09	35.16	RING/U-box superfamily protein	[more]
AT1G65040.1	1.5e-09	35.16	RING/U-box superfamily protein	[more]
AT1G65040.3	1.5e-09	35.16	RING/U-box superfamily protein	[more]
AT3G16090.1	9.5e-09	33.59	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 405..442 e-value: 1.7E-7 score: 40.9
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 405..443 score: 13.595753
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 403..446 e-value: 2.9E-10 score: 39.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..167
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	PANTHER	PTHR15860:SF19	RING/U-BOX SUPERFAMILY PROTEIN	coord: 1..466
None	No IPR available	CDD	cd16532	RING-HC_RNFT1_like	coord: 404..443 e-value: 3.15392E-28 score: 103.903
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 400..448
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 380..453 e-value: 4.0E-18 score: 66.6
IPR044235	RING finger and transmembrane domain-containing protein 1/2	PANTHER	PTHR15860	UNCHARACTERIZED RING FINGER-CONTAINING PROTEIN	coord: 1..466
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 420..429

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013842.1	MS013842.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1904294	positive regulation of ERAD pathway
molecular_function	GO:0061630	ubiquitin protein ligase activity