MS013812 (gene) Bitter gourd (TR) v1

Overview


Name	MS013812
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	MADS-box transcription factor 23-like
Location	scaffold541: 284123 .. 287868 (-)
RNA-Seq Expression	MS013812
Synteny	MS013812

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAGGGAGAGTGGAGATCAAGAAAATCGAGAACATCAACAGCAGGCAAGTTACATTCTCCAAACGCCGCAATGGGTTGATGAAGAAGGCCAAGGAATTGTCTGTTCTTTGTGATGCAGAGGTCGCCATTGTTGTGTTCTCCAGCACTGGGAGGCTCTATGAATTCTCCAGCACTAGGTAAAGGGTTTTTTGCTTTAGGGTTTTTTGATTTCTTGATTTTGGTCTTTTCTGTCTGCTGTTGGAGCTTTGAGTTTCTGATTGTTGGACCATGTGAATTTGGGGGATTCAGTAACAGTGGAAACTTTATCAGCTCTGGAGTTTAAAAGGGGGTTTTGTATTTTTGGGTCTCTAGTGAAATGTGAATAGGATCAAATAAAAGTTGTGGTGTGGGGTTCAGAACTCTTTCATTGGTTCTGCTGCAGAAGTTTTATTTTATATTAAAATAAACTAACTTGAGGTTTTGTTTGGTATTCTAGTTTATCATATTATATAGAGAAAGTTTGGTTTTATTCACTTGGTAAATAGTAAAATGAACCACCGCGGGTTGGCTTGGTGGTCAATAGTGCCTATGAAGAGTGAATGAGTTCAAGCTAGACTAAAGAGAGAATCAGTTCAAACTATAGTAGCCACCTAGTAGAATTTAATATTCTATGACTTTTCTTAGCAATCAAATATAGTGAGGTTAGGTAGTTATTTCATGAGATTAGTCAAGGTGCAAAGCTAGCCTAAACACTCAAAAAGTTAAATGATATGGACAAGCTAAAGAAGAAGAGAATGATGGACATAGTTCTCCTTTACAAATGGTCAGATAGTTATCTTTTAACTAGTAACTGAAATGATCTTTTACTACTAACAGTACAGCATGAGATGAGATACAGCAGGTTTTAATAATCTGACATAAATGTAGAATCTGCATTTTCTTGAATTACCCAAGTAACTAGGAAACTAGCAAAGTTTGATGTTGGGTTATGAAAAAAAAAAAAGAATAGTTGTCTTTAATATTATTTGTTTATTTGGAAACATGCTTAGTTATTTGACTCTGTTTCTCTCTGTTTTAAAGCATGGAACATACTCTTTCAAGGTACAGAGGACAGGGCATGGAGTTGGATTTTCCAAAGGAGACTTTGGACCACACAACAAAAGTAAATGCACTACATTTTTATGGTCTATGTTTATTTTTCCCTCTCTCTCTCTCTCCTTTTTTTTGTTTGTTATTTTTGCTAAGTTCTCTTTTAATTTTCTTGTGAAAAACAGTTGCCACCATCCGATTCCAATACAAAGTCATCTGAAGAGGAGATTGTAAAGCTAAAGTTATCATGCTTGTAAGTCGGTAGTAAGTAGTTTTCTTATTTGTTTGTAAGCTAATCTTGTTAAACATACAAATTTGAAATAGTAGGAACTGGTTAGGAATTATTAAGGTTTGGTAATGTTCTCATTTCATGTTTTTCATTTCCATTTTTAGAGAAATGTAAGCGTTTGGTAATGGTTCTTGTTTCTCGTTTTTTATTTTTAAGAAACGTTTTCAAGATTGTGCAGAAATTTTGGAAACAATTAAATCAAGTTTCTTGTTTCTTGTTCAGATTCTATTTTTTTTTCCAAAACATAAATAATTCATTATTTTATTAATATTGACTCATAATAAATATTAAAAAATAAAAATAACATAAAAGATTTGAATATTTAATTTATAAATTAATTTTTATATAAAAACTTTACTTTTTTATTTTAAAAGTTTAGAGAACGAGAAACAAGAAATCATTATCAACTAGAAACAGTTACTAAACTCAATTTTATTTTTATTTATCAAAAAATAAAAAACGAGAAATAAGAAACAGAAAACGGGAAATAAGAAATAAGAAATAGAAATGTTAACAAAGGGACCTGAAAGAATGAGTACTCTTGGAACAGTGCATGCTCTTGGTGTAAAGATTCTCCATATTTCCTTTCTTGTAGTATGAACTCTCTTTTAACCAATTGGAGAAGTTTTCTGTAATTCCTTTGGTTTTTTTGTTGAATCTCCACCATTTTGTAATTTCAATCATCAATAAAATTGTTTCTTATCAGAAAAAAAAAAAGAATGAGTACTTAGATGATACACCGAAACAAAAAAAGTTGGTCTGTGTCTGTTGTAAATTTAAAGTACAAGTCATATGTCTTCACTTTACCAATTTATTTACTTTGACATTGTAGAACACAACTTAAGAAGCCTGTTATTTGGTAAATAACTCTTAGCTTTTGTTTTTCTACCTCTTAGGCAGATGCGAGGCCAAGAATTGGATGGTTTGAGCTTTAGAGAGCTACAAAACTTAGAAAATCAGTTGCGGGAAGGAATCGTATCGATCAAAGACAAGAAGGTACTATGCAAATATGCATGTTAATTTTAGTACTTTGTGTAAAAATTCTTGCCTTGGCTGAGACATAACTTTTTCAGGAAACATTGCTTTTGGAGCAGCTCCAAAGGTGTAGGTCACAGGTAACTTTGTCATCCTTTTTTTAATTCGTTTTCTTTTATTTCTATGTTTCTTAGAATCCAAAGAAGTTACCAATATCACAAGTAAGCTAGTTGAAGATTTTGGTTTGGATGTTGAGGTTTTTAAATGAATCGGACTATCGGGATGAAGAACGACCAAATCTTAGTGGATTGTGGTAGCAAAACCACCCTACCACTTATAATACCCAATCGTAATTTTGGAACAAAGAATTATGCTAGTGACACCTATCGAATAAGGGTGTGTTTGAGAGTGATGGTAGAATTAGTGATTTTGAAAAAAGAGATTTAAGTAATTGATTTTCCAAAATCACCATTCAAGTGATACCTTAAAAATCAATTTAAATTGATTTTAAGGTTTCCTAAAATCAATGTTCTAATTTGCCAAACATGATCAATAGGAAGATGAGTGATTTTCTAATGGTAAAAGTGATTTTGGCATAGCCAAAATCACTCCCAAACACACCCTCAATCTTCCTTGATTGGTCATTAATGTTTCTTATAATTTTATTCTTCCTTTTGAACTTTATCCTCTCCTACATTCATCTCTTCATCTTCTTTTAGTTGACTTTAATCAACCATAGCTCTTGTCTCGAGTAAATCTTTCTGAAAGTTTGCTTTCCTTCAAGGTTTTGCTTGATTTGATTATAGTTGATTGTGGTTGTGATTGTATCAAATGGAATAAAATGAAAAGACAATGGTAATGTAACCAACTTTGATAAGTGGGGTCGGTAGAAAATAACTCAGTTAATATTTGCTAGAGGGAAGGTTTTGGTAAGTTTATAGATTGATGGATTAATTGAAATGGTTGTTGTATTACATTTAGAACTCTCCTAATAGAAATGTGGAAGCAGGAGTCATGAACTTCCAATAAACACGATCTCGTGGAACTAATGTTCTCTCGATCTTACTCGTTGATTACTAATTATTTCCTATTCGGATTTTGTTTACTCCCAGGGGGAAATGGTCATTTCAGAGAACGAGACTCTGCGAAAACAGGTAAGTTTTTGGTTTAAAAGTAATTAACTCATATTTTCGGGATGGAAAGAATGACATGAATTTTTTATTTATATCTTCCTTTCGAACATTTATAGCTTGAGGAGTTACAGCAGAGAAATAATACACCGCTCCCGGAGTCCAGCCCCTTTCAAAGATCCTACTTCTCGGATTCGAAAACTACTTCTACCAACGAGACTGAGGCCGAGACCGAGGCAGAGGAAAATGACCGCTCGGAAATTTCCTTGCATCTGGGG

mRNA sequence

ATGGGAAGAGGGAGAGTGGAGATCAAGAAAATCGAGAACATCAACAGCAGGCAAGTTACATTCTCCAAACGCCGCAATGGGTTGATGAAGAAGGCCAAGGAATTGTCTGTTCTTTGTGATGCAGAGGTCGCCATTGTTGTGTTCTCCAGCACTGGGAGGCTCTATGAATTCTCCAGCACTAGCATGGAACATACTCTTTCAAGGTACAGAGGACAGGGCATGGAGTTGGATTTTCCAAAGGAGACTTTGGACCACACAACAAAATTGCCACCATCCGATTCCAATACAAAGTCATCTGAAGAGGAGATTGTAAAGCTAAAGTTATCATGCTTGCAGATGCGAGGCCAAGAATTGGATGGTTTGAGCTTTAGAGAGCTACAAAACTTAGAAAATCAGTTGCGGGAAGGAATCGTATCGATCAAAGACAAGAAGGAAACATTGCTTTTGGAGCAGCTCCAAAGGTGTAGGTCACAGCTTGAGGAGTTACAGCAGAGAAATAATACACCGCTCCCGGAGTCCAGCCCCTTTCAAAGATCCTACTTCTCGGATTCGAAAACTACTTCTACCAACGAGACTGAGGCCGAGACCGAGGCAGAGGAAAATGACCGCTCGGAAATTTCCTTGCATCTGGGG

Coding sequence (CDS)

ATGGGAAGAGGGAGAGTGGAGATCAAGAAAATCGAGAACATCAACAGCAGGCAAGTTACATTCTCCAAACGCCGCAATGGGTTGATGAAGAAGGCCAAGGAATTGTCTGTTCTTTGTGATGCAGAGGTCGCCATTGTTGTGTTCTCCAGCACTGGGAGGCTCTATGAATTCTCCAGCACTAGCATGGAACATACTCTTTCAAGGTACAGAGGACAGGGCATGGAGTTGGATTTTCCAAAGGAGACTTTGGACCACACAACAAAATTGCCACCATCCGATTCCAATACAAAGTCATCTGAAGAGGAGATTGTAAAGCTAAAGTTATCATGCTTGCAGATGCGAGGCCAAGAATTGGATGGTTTGAGCTTTAGAGAGCTACAAAACTTAGAAAATCAGTTGCGGGAAGGAATCGTATCGATCAAAGACAAGAAGGAAACATTGCTTTTGGAGCAGCTCCAAAGGTGTAGGTCACAGCTTGAGGAGTTACAGCAGAGAAATAATACACCGCTCCCGGAGTCCAGCCCCTTTCAAAGATCCTACTTCTCGGATTCGAAAACTACTTCTACCAACGAGACTGAGGCCGAGACCGAGGCAGAGGAAAATGACCGCTCGGAAATTTCCTTGCATCTGGGG

Protein sequence

MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSSTSMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRNNTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG

Homology

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BLAST of MS013812 vs. NCBI nr
Match: XP_022152219.1 (MADS-box transcription factor 23-like isoform X1 [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 210/225 (93.33%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 20  MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 79

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG
Sbjct: 80  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 139

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLENQLREGIVSIKDKKETLLLEQLQ+CRS              QLEELQQRN
Sbjct: 140 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQKCRSQGEMVISENETLRKQLEELQQRN 199

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG
Sbjct: 200 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 244

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BLAST of MS013812 vs. NCBI nr
Match: XP_022152220.1 (MADS-box transcription factor 23-like isoform X2 [Momordica charantia])

HSP 1 Score: 386.3 bits (991), Expect = 1.6e-103
Identity = 210/225 (93.33%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG
Sbjct: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLENQLREGIVSIKDKKETLLLEQLQ+CRS              QLEELQQRN
Sbjct: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQKCRSQGEMVISENETLRKQLEELQQRN 180

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG
Sbjct: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 225

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BLAST of MS013812 vs. NCBI nr
Match: KAG6603203.1 (Agamous-like MADS-box protein AGL18, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 361.7 bits (927), Expect = 4.3e-96
Identity = 193/211 (91.47%), Postives = 201/211 (95.26%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFP+ETLDH T++PPSDS+ KSSE+E VKLKL+ +QMRGQELD 
Sbjct: 61  SMEHTLSRYRGQGMELDFPRETLDHPTQVPPSDSDAKSSEDEFVKLKLTYMQMRGQELDS 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRNNTPLPESSPFQRSY 180
           LSFRELQNLENQLREGIVSIKDKKE+LLLEQLQRCRSQLEE QQRNNTPL ESSP QRSY
Sbjct: 121 LSFRELQNLENQLREGIVSIKDKKESLLLEQLQRCRSQLEEFQQRNNTPLLESSPLQRSY 180

Query: 181 FSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           FSDSKT STNETEAETEAEEND SEISLHLG
Sbjct: 181 FSDSKTASTNETEAETEAEENDCSEISLHLG 211

[Close]

BLAST of MS013812 vs. NCBI nr
Match: XP_023544890.1 (MADS-box transcription factor 23-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 353.2 bits (905), Expect = 1.5e-93
Identity = 194/225 (86.22%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFP+ETLDH T+LPPSDS+ KSSE+E VKLKL+ +QMRGQELD 
Sbjct: 61  SMEHTLSRYRGQGMELDFPRETLDHPTQLPPSDSDAKSSEDEFVKLKLTYMQMRGQELDS 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLENQLREGIVSIKDKKE+LLLEQLQRCRS              QLEE QQRN
Sbjct: 121 LSFRELQNLENQLREGIVSIKDKKESLLLEQLQRCRSQGEVVISENETLRKQLEEFQQRN 180

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPL ESSP QRSYFSDSKT STNETEAETEAEEND SEISLHLG
Sbjct: 181 NTPLLESSPLQRSYFSDSKTASTNETEAETEAEENDCSEISLHLG 225

[Close]

BLAST of MS013812 vs. NCBI nr
Match: XP_022928594.1 (MADS-box transcription factor 23-like [Cucurbita moschata])

HSP 1 Score: 352.1 bits (902), Expect = 3.4e-93
Identity = 193/225 (85.78%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFP+ETLDH T++PPSDS+ KSSE+E VKLKL+ +QMRGQELD 
Sbjct: 61  SMEHTLSRYRGQGMELDFPRETLDHPTQVPPSDSDAKSSEDEFVKLKLTYMQMRGQELDS 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLENQLREGIVSIKDKKE+LLLEQLQRCRS              QLEE QQRN
Sbjct: 121 LSFRELQNLENQLREGIVSIKDKKESLLLEQLQRCRSQGEVVISENETLRKQLEEFQQRN 180

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPL ESSP QRSYFSDSKT STNETEAETEAEEND SEISLHLG
Sbjct: 181 NTPLLESSPLQRSYFSDSKTASTNETEAETEAEENDCSEISLHLG 225

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BLAST of MS013812 vs. ExPASy Swiss-Prot
Match: Q9M2K8 (Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana OX=3702 GN=AGL18 PE=1 SV=1)

HSP 1 Score: 155.6 bits (392), Expect = 6.2e-37
Identity = 99/224 (44.20%), Postives = 141/224 (62.95%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIENINSRQVTFSKRRNGL+KKAKELS+LCDAEVA+++FSSTG++Y+FSS 
Sbjct: 1   MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDS------NTKSSEEEIVKLKLSCLQMR 120
            ME  LSRY G        K+  +H   +  S        N  S + E+ +L+L+  +++
Sbjct: 61  CMEQILSRY-GYTTASTEHKQQREHQLLICASHGNEAVLRNDDSMKGELERLQLAIERLK 120

Query: 121 GQELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQR--------------CRSQLE 180
           G+EL+G+SF +L +LENQL E + S+KD+K  +LL Q++R               R Q+E
Sbjct: 121 GKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEENQILRKQVE 180

Query: 181 ELQQRNNTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRS 205
            L + +   +    P   S  +D +++S+ E E + E   +D S
Sbjct: 181 MLGRGSGPKVLNERPQDSSPEADPESSSSEEDENDNEEHHSDTS 223

[Close]

BLAST of MS013812 vs. ExPASy Swiss-Prot
Match: Q39295 (Agamous-like MADS-box protein AGL15 OS=Brassica napus OX=3708 GN=AGL15 PE=3 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 3.2e-33
Identity = 82/168 (48.81%), Postives = 116/168 (69.05%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++EIK+IEN NSRQVTFSKRR GL+KKA ELSVLCDAEVA++VFS +G+L+EFSST
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRAGLLKKAHELSVLCDAEVAVIVFSKSGKLFEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SM+ TL RY    +  D P   ++  T+     +     ++EI  L+   L M+G+ L+ 
Sbjct: 61  SMKKTLLRYGNYQISSDVP--GINCKTENQEECTEVDLLKDEISMLQEKHLHMQGKPLNL 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRNNT 169
           LS +ELQ+LE QL   ++S++++KE LL +QL+  R + +  +  N T
Sbjct: 121 LSLKELQHLEKQLNFSLISVRERKELLLTKQLEESRLKEQRAELENET 166

[Close]

BLAST of MS013812 vs. ExPASy Swiss-Prot
Match: Q38847 (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana OX=3702 GN=AGL15 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.2e-32
Identity = 77/168 (45.83%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++EIK+IEN NSRQVTFSKRR+GL+KKA+ELSVLCDAEVA++VFS +G+L+E+SST
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
            M+ TLSRY                 +K     +     ++++ KL+   LQ++G+ L+ 
Sbjct: 61  GMKQTLSRY---------GNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNP 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRNNT 169
           L+F+ELQ+LE QL   +++++++KE LL  QL+  R + +  +  N T
Sbjct: 121 LTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENET 159

[Close]

BLAST of MS013812 vs. ExPASy Swiss-Prot
Match: A2RVQ5 (Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-30
Identity = 81/171 (47.37%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++ IK+I N  SRQVTFSKRRNGL+KKAKEL++LCDAEV +++FSSTGRLY+FSS+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCL-----QMRG 120
           SM+  + RY       D   ET       P S+      E  I+K +L  L     QM G
Sbjct: 61  SMKSVIERYS------DAKGETSSEND--PASEIQFWQKEAAILKRQLHNLQENHRQMMG 120

Query: 121 QELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRN 167
           +EL GLS   LQNLENQL   +  ++ KK+ +L+E++Q    +   + Q N
Sbjct: 121 EELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQEN 163

[Close]

BLAST of MS013812 vs. ExPASy Swiss-Prot
Match: Q6EP49 (MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS27 PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.6e-29
Identity = 71/166 (42.77%), Postives = 111/166 (66.87%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++ I++I+N  SRQVTFSKRRNG+ KKAKEL++LCDAEV +++FSSTGRLYE+SST
Sbjct: 1   MGRGKIVIRRIDNSTSRQVTFSKRRNGIFKKAKELAILCDAEVGLMIFSSTGRLYEYSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SM+  + RY   G   D  +   +  ++L        S  +++  L+ +  Q+ G++L G
Sbjct: 61  SMKSVIDRY---GKSKDEQQAVANPNSELKFWQREAASLRQQLHNLQENHRQLMGEDLSG 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRN 167
           L+ +ELQ+LENQL   + S++ KK+ +L++++     +   + Q N
Sbjct: 121 LNVKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQEN 163

[Close]

BLAST of MS013812 vs. ExPASy TrEMBL
Match: A0A6J1DDB0 (MADS-box transcription factor 23-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019995 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.0e-104
Identity = 210/225 (93.33%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG
Sbjct: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLENQLREGIVSIKDKKETLLLEQLQ+CRS              QLEELQQRN
Sbjct: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQKCRSQGEMVISENETLRKQLEELQQRN 180

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG
Sbjct: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 225

[Close]

BLAST of MS013812 vs. ExPASy TrEMBL
Match: A0A6J1DFE2 (MADS-box transcription factor 23-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019995 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.0e-104
Identity = 210/225 (93.33%), Postives = 211/225 (93.78%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 20  MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 79

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG
Sbjct: 80  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 139

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLENQLREGIVSIKDKKETLLLEQLQ+CRS              QLEELQQRN
Sbjct: 140 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQKCRSQGEMVISENETLRKQLEELQQRN 199

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG
Sbjct: 200 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 244

[Close]

BLAST of MS013812 vs. ExPASy TrEMBL
Match: A0A6J1ELA7 (MADS-box transcription factor 23-like OS=Cucurbita moschata OX=3662 GN=LOC111435451 PE=4 SV=1)

HSP 1 Score: 352.1 bits (902), Expect = 1.7e-93
Identity = 193/225 (85.78%), Postives = 201/225 (89.33%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFP+ETLDH T++PPSDS+ KSSE+E VKLKL+ +QMRGQELD 
Sbjct: 61  SMEHTLSRYRGQGMELDFPRETLDHPTQVPPSDSDAKSSEDEFVKLKLTYMQMRGQELDS 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLENQLREGIVSIKDKKE+LLLEQLQRCRS              QLEE QQRN
Sbjct: 121 LSFRELQNLENQLREGIVSIKDKKESLLLEQLQRCRSQGEVVISENETLRKQLEEFQQRN 180

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPL ESSP QRSYFSDSKT STNETEAETEAEEND SEISLHLG
Sbjct: 181 NTPLLESSPLQRSYFSDSKTASTNETEAETEAEENDCSEISLHLG 225

[Close]

BLAST of MS013812 vs. ExPASy TrEMBL
Match: A0A6J1HTB2 (MADS-box transcription factor 23-like OS=Cucurbita maxima OX=3661 GN=LOC111467266 PE=4 SV=1)

HSP 1 Score: 349.7 bits (896), Expect = 8.3e-93
Identity = 193/225 (85.78%), Postives = 200/225 (88.89%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFP+ETLDH T+LPPSDS+ KSSE+E VKLKL+ +QMRGQELD 
Sbjct: 61  SMEHTLSRYRGQGMELDFPRETLDHPTQLPPSDSDAKSSEDEFVKLKLTYMQMRGQELDS 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSFRELQNLE QLREGIVSIKDKKE+LLLEQLQRCRS              QLEE QQRN
Sbjct: 121 LSFRELQNLECQLREGIVSIKDKKESLLLEQLQRCRSQGEVVISENETLRKQLEEFQQRN 180

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           NTPL ESSP QRSYFSDSKT STNETEAETEAEEND SEISLHLG
Sbjct: 181 NTPLLESSPLQRSYFSDSKTASTNETEAETEAEENDCSEISLHLG 225

[Close]

BLAST of MS013812 vs. ExPASy TrEMBL
Match: A0A1S3C2E6 (MADS-box transcription factor 23-like OS=Cucumis melo OX=3656 GN=LOC103495885 PE=4 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 2.7e-91
Identity = 190/225 (84.44%), Postives = 196/225 (87.11%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST
Sbjct: 18  MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 77

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SMEHTLSRYRGQGMELDFPKETLDH  +LPPSDS+ KSSEEEI KLKL+  QMRGQELD 
Sbjct: 78  SMEHTLSRYRGQGMELDFPKETLDHPAQLPPSDSDAKSSEEEIEKLKLAYTQMRGQELDS 137

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRS--------------QLEELQQRN 180
           LSF +LQNLENQLREGI+SIKDKKETLLLEQLQRCRS              QLEE QQRN
Sbjct: 138 LSFIDLQNLENQLREGIISIKDKKETLLLEQLQRCRSQGEVVISENETLRKQLEEFQQRN 197

Query: 181 NTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRSEISLHLG 212
           N P  ESSP QRSYFSDSKT STNETE +TEAEENDRSEISLHLG
Sbjct: 198 NIPRQESSPLQRSYFSDSKTASTNETEVKTEAEENDRSEISLHLG 242

[Close]

BLAST of MS013812 vs. TAIR 10
Match: AT3G57390.1 (AGAMOUS-like 18 )

HSP 1 Score: 155.6 bits (392), Expect = 4.4e-38
Identity = 99/224 (44.20%), Postives = 141/224 (62.95%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRGR+EIKKIENINSRQVTFSKRRNGL+KKAKELS+LCDAEVA+++FSSTG++Y+FSS 
Sbjct: 1   MGRGRIEIKKIENINSRQVTFSKRRNGLIKKAKELSILCDAEVALIIFSSTGKIYDFSSV 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDS------NTKSSEEEIVKLKLSCLQMR 120
            ME  LSRY G        K+  +H   +  S        N  S + E+ +L+L+  +++
Sbjct: 61  CMEQILSRY-GYTTASTEHKQQREHQLLICASHGNEAVLRNDDSMKGELERLQLAIERLK 120

Query: 121 GQELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQR--------------CRSQLE 180
           G+EL+G+SF +L +LENQL E + S+KD+K  +LL Q++R               R Q+E
Sbjct: 121 GKELEGMSFPDLISLENQLNESLHSVKDQKTQILLNQIERSRIQEKKALEENQILRKQVE 180

Query: 181 ELQQRNNTPLPESSPFQRSYFSDSKTTSTNETEAETEAEENDRS 205
            L + +   +    P   S  +D +++S+ E E + E   +D S
Sbjct: 181 MLGRGSGPKVLNERPQDSSPEADPESSSSEEDENDNEEHHSDTS 223

[Close]

BLAST of MS013812 vs. TAIR 10
Match: AT5G13790.1 (AGAMOUS-like 15 )

HSP 1 Score: 141.4 bits (355), Expect = 8.6e-34
Identity = 77/168 (45.83%), Postives = 115/168 (68.45%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++EIK+IEN NSRQVTFSKRR+GL+KKA+ELSVLCDAEVA++VFS +G+L+E+SST
Sbjct: 1   MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSST 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
            M+ TLSRY                 +K     +     ++++ KL+   LQ++G+ L+ 
Sbjct: 61  GMKQTLSRY---------GNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNP 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRNNT 169
           L+F+ELQ+LE QL   +++++++KE LL  QL+  R + +  +  N T
Sbjct: 121 LTFKELQSLEQQLYHALITVRERKERLLTNQLEESRLKEQRAELENET 159

[Close]

BLAST of MS013812 vs. TAIR 10
Match: AT3G57230.1 (AGAMOUS-like 16 )

HSP 1 Score: 133.3 bits (334), Expect = 2.3e-31
Identity = 81/171 (47.37%), Postives = 108/171 (63.16%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++ IK+I N  SRQVTFSKRRNGL+KKAKEL++LCDAEV +++FSSTGRLY+FSS+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCL-----QMRG 120
           SM+  + RY       D   ET       P S+      E  I+K +L  L     QM G
Sbjct: 61  SMKSVIERYS------DAKGETSSEND--PASEIQFWQKEAAILKRQLHNLQENHRQMMG 120

Query: 121 QELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRN 167
           +EL GLS   LQNLENQL   +  ++ KK+ +L+E++Q    +   + Q N
Sbjct: 121 EELSGLSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQEN 163

[Close]

BLAST of MS013812 vs. TAIR 10
Match: AT3G57230.2 (AGAMOUS-like 16 )

HSP 1 Score: 131.0 bits (328), Expect = 1.2e-30
Identity = 75/166 (45.18%), Postives = 105/166 (63.25%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           MGRG++ IK+I N  SRQVTFSKRRNGL+KKAKEL++LCDAEV +++FSSTGRLY+FSS+
Sbjct: 1   MGRGKIAIKRINNSTSRQVTFSKRRNGLLKKAKELAILCDAEVGVIIFSSTGRLYDFSSS 60

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMRGQELDG 120
           SM+  + RY     E     +      ++        +  EE+V  +    QM G+EL G
Sbjct: 61  SMKSVIERYSDAKGETSSENDPASEIQEMYIVTLEKYAYSEELVLDR----QMMGEELSG 120

Query: 121 LSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRN 167
           LS   LQNLENQL   +  ++ KK+ +L+E++Q    +   + Q N
Sbjct: 121 LSVEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQEN 162

[Close]

BLAST of MS013812 vs. TAIR 10
Match: AT3G58780.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 127.5 bits (319), Expect = 1.3e-29
Identity = 73/173 (42.20%), Postives = 111/173 (64.16%), Query Frame = 0


Query: 1   MGRGRVEIKKIENINSRQVTFSKRRNGLMKKAKELSVLCDAEVAIVVFSSTGRLYEFSST 60
           +GRG++EIK+IEN  +RQVTF KRRNGL+KKA ELSVLCDAEVA+V+FS+ GRLYE+++ 
Sbjct: 16  LGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVALVIFSTRGRLYEYANN 75

Query: 61  SMEHTLSRYRGQGMELDFPKETLDHTTKLPPSDSNTKSSEEEIVKLKLSCLQMR------ 120
           S+  T+ RY+         K   D       +++NT+  ++E  KL+     ++      
Sbjct: 76  SVRGTIERYK---------KACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHI 135

Query: 121 -GQELDGLSFRELQNLENQLREGIVSIKDKKETLLLEQLQRCRSQLEELQQRN 167
            G+ L  L+F+EL+NLE +L +GI  ++ KK  LL+ +++  + +  ELQ  N
Sbjct: 136 VGESLGSLNFKELKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNN 179

The following BLAST results are available for this feature:

BLAST of MS013812 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022152219.1	1.6e-103	93.33	MADS-box transcription factor 23-like isoform X1 [Momordica charantia]	[more]
XP_022152220.1	1.6e-103	93.33	MADS-box transcription factor 23-like isoform X2 [Momordica charantia]	[more]
KAG6603203.1	4.3e-96	91.47	Agamous-like MADS-box protein AGL18, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_023544890.1	1.5e-93	86.22	MADS-box transcription factor 23-like [Cucurbita pepo subsp. pepo]	[more]
XP_022928594.1	3.4e-93	85.78	MADS-box transcription factor 23-like [Cucurbita moschata]	[more]

BLAST of MS013812 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2K8	6.2e-37	44.20	Agamous-like MADS-box protein AGL18 OS=Arabidopsis thaliana OX=3702 GN=AGL18 PE=...	[more]
Q39295	3.2e-33	48.81	Agamous-like MADS-box protein AGL15 OS=Brassica napus OX=3708 GN=AGL15 PE=3 SV=1	[more]
Q38847	1.2e-32	45.83	Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana OX=3702 GN=AGL15 PE=...	[more]
A2RVQ5	3.3e-30	47.37	Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana OX=3702 GN=AGL16 PE=...	[more]
Q6EP49	1.6e-29	42.77	MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]

BLAST of MS013812 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DDB0	8.0e-104	93.33	MADS-box transcription factor 23-like isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1DFE2	8.0e-104	93.33	MADS-box transcription factor 23-like isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1ELA7	1.7e-93	85.78	MADS-box transcription factor 23-like OS=Cucurbita moschata OX=3662 GN=LOC111435...	[more]
A0A6J1HTB2	8.3e-93	85.78	MADS-box transcription factor 23-like OS=Cucurbita maxima OX=3661 GN=LOC11146726...	[more]
A0A1S3C2E6	2.7e-91	84.44	MADS-box transcription factor 23-like OS=Cucumis melo OX=3656 GN=LOC103495885 PE...	[more]

BLAST of MS013812 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G57390.1	4.4e-38	44.20	AGAMOUS-like 18	[more]
AT5G13790.1	8.6e-34	45.83	AGAMOUS-like 15	[more]
AT3G57230.1	2.3e-31	47.37	AGAMOUS-like 16	[more]
AT3G57230.2	1.2e-30	45.18	AGAMOUS-like 16	[more]
AT3G58780.1	1.3e-29	42.20	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 126..165
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..211
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 162..191
None	No IPR available	PANTHER	PTHR11945	MADS BOX PROTEIN	coord: 1..201
None	No IPR available	PANTHER	PTHR11945:SF469	AGAMOUS-LIKE MADS-BOX PROTEIN AGL15	coord: 1..201
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 62.46 coord: 23..38 score: 80.89 coord: 38..59 score: 59.28
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 5.4E-40 score: 148.9
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..57 e-value: 1.1E-26 score: 92.1
IPR002100	Transcription factor, MADS-box	PROSITE	PS00350	MADS_BOX_1	coord: 3..57
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 32.59005
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 13..78 e-value: 6.5E-29 score: 101.6
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 2..71
IPR002487	Transcription factor, K-box	PFAM	PF01486	K-box	coord: 100..167 e-value: 4.8E-12 score: 45.9
IPR002487	Transcription factor, K-box	PROSITE	PS51297	K_BOX	coord: 89..179 score: 9.513903
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..70 e-value: 3.88446E-41 score: 132.676

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS013812.1	MS013812.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding